Rorug07G0222900

Ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0005181
Physical Location & Seq
Reverse (-)
20179843 .. 20215143
35301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0222900.1

Sequence Viewer

Length: 13014 bp
ATGTTGGAGGATCAGGTGGCGAACCTCTTGCAGAGGTACCTGGGGAACTACGTGAAGGGACTCAATAAAGAGGCCCTCAAGATCAGTGTCTGGCAAGGTGATGTGGAGCTAACAAATATGCAGTTGAAGCCAGAGGCACTGAATGCCTTAAAATTACCTGTGAAGGTCAAGGCAGGATTTCTTGGATCAGTGAAACTTAAGGTTCCATGGAGCAGGCTTGGCCAGGATCCAGTGTTAGTTTCTTTGGATCGCATTTTTCTATTAGCTGAGCCTGAAACGCAAGTTGAGGGAAGTAGTGAGGATGCTGTACAGGAAACTAAGAAAAACCGAGTGCAGGAAATGGAAATGAAGTTGTTGGAGAAGGCGCAACAACTGAAGTCAGATGTGAATAAATCATGGTTGGGATCCCTGATCAGCACAATAATTGGAAATTTGAAACTTTCAATTTCAAATATTCACATCAGATACGAGGATCTTGAGAGCAATTTTGGTCATCCGTTTGCAGCGGGCATAACCTTGGAGAGACTTTCAGCCATGACAGTTGATGATAGTGGAAAAGAGACATTTGTTACTGGGGGTGCACTGAACCGTATTCAGAAGTCTGTCGAACTTGATCGGCTTGCACTATATCTGGATTCTGATATTGCTCCATGGCATGTTAACAAGCAATGGGAGGATTTGCTTCCATCAGAGTGGGTCCAGGTTTTTAAATTTGGTACTAAAGATGGTAAACCAGCGAATAAATCGACCAAGAAGCATACTTATGTATTGGAACCTGTTTCTGGAAGTGCTAAGTATTCAAAGCTACGACAAAATGAATTTGCTGATAGTGGTCGGCCTTTACATAAAGCAGCAGTTAATCTGGATGATGTGACTATCTGTTTGCCAAAGGACGGATACAGGGATGTACTGAAGTTAGCTGATAACTTTGCTGCCTTCAATCAGCGGTTGAAGTATGCTCATTATCGTCCACATGTCTCTGTAAAATCTGATCCTAGGTCTTGGTGGAAGTATGCTTACAGAGTTGTTTCCGACCAAATGAAGAAGGCAAGTGGGAAACTGTCATGGGAGCAAGTTCTGAAGTATGCAAGATTACGTAAAAGATATATATCTCTATATGCTTCGCTGCTTAGATCTGACCCTAGTCGGGCAGTGGTTGAAGATAACAAAGACATTGAAGAACTAGATCGTGAACTTGATATTGAACTTATACTGCAGTGGAGGATGTTGGCTCACAAGTTTGTAGAGCAGTCATTAGAGTCAGAACTTGACTCGAGGAAACAAAAAGCAAAGAAATCTTGGTGGTCTGGATGGGGCAGTCAGTCTCTGAAAGATGAGAATGAGCCATTTAGTTTCACTGATGAAGACTGGAAGCAGTTAAATGAAATCATCGGGTATAAGGAGAGTGATGATAAACTGTTGGTTACAGTTGATGAAAAGATGGATGCTCTTCAGACTTCCTTGAGCATTTCTATGAAACGTAATGCCACTAAGCTTATTGATGAGTCTCAGGAGTGTCTTGCTGAATTATCGTGTGAAGGCATCGATTGCTCAATAAAGCTCTATCCAGAAACAAAAGTTTTTGACCTGAACTTGGGATCATATAAGTTATCAACGCCAAACGGTCTCCTTGCTGAGAGTGCAAGTGCTTATGATTCTTTAGTTGGCGTGTTCTGTCTCAAGCCTTTTGACACCAAGGTGGACTGGAGCTTTGTTGCTAAGGCTTCTCCCTGTTATGTGACTTATCTAAAGGATGCAATTGATCAAATTATAAAGTTTTTTCGGAGTAATCCAGTTAGTCAGAAGATAGCTATGGATACTGCAGCTGCAGTGCAGATGACAATCGATGGAGTCAAGCGCACAGCTCAGCAACAAGTGAACCGGGCATTGAAGGACCATTCCAGGTTTTTGTTGGACTTGGATATCGCGGCTCCTAAGATTACCATTCCTACTGACTTTTGTCCCGACAATATTCATCCAACAAAACTGATGCTGGACTTGGGAAATTTGGTTATTGGTACCAAGGATGACTATGAGCATGGATCATTGAAGGAGCAAGATATGTATCTGCAGTTTAATTTGGTTCTAAGTGATGTATCTGCTTTTTTGGTTGATGGTGACTACTGTTGGGGCAAATCTCCTGCAAAAAATTCTGCTGGTTCTTCCAACTCAGATGGTGTTAGTTTGTTGCCTTTTATTGATAAGTGTGGGGTAATTCTAACGTTTCAACAGATTAGATTAGAGAGTCCATCCTATCCTGCAACACGACTAGCTGTACGGGTGCCATCGTTGGGGTTTCACTTCTCCCCAGCTCGGTATCATCGATTGATGCAAGTAGTTAAGATCTTTGAGGAGGAGGATAGTGAGACGTCAGATCTCGTTGGCCCTTGGAATCAAGCTGACTTTGAGGGGTGGTCGTCTCTTCTTGTTTTCAAGGGTCTGGGAAATAGGGAAGCAGTGTGGCAGCGGCGCTACCTATGCTTAGTTGGTCCTTTCCTTTATGTACTTGAGAGCCCTAGCTCAAAATCGTACAAGCAATGTATCAGCTTACAAGGGAAACACATATATGAGGTTCCCCCAGAGTGTGTTGGTGATACCGATCTTGTTTTGGCTGTCTGTGATTCTACACGAGCGAATAACAAGGTCGTGGAGGATGCAAATGCACTAATCTTGCTATTTGATTCTGATGATTCGAAGAAAACTTGGCAGAGCCGGTTGCGGGGGGCTGTCTATCGTGCATCAGGTCCTGCTCCTGTAACTGGTCTATCCGATACTTCGTCAGAATCTGAGGATTCAGTAATGGAGCTTAATGGCAATCATGATATGGGTGATTTATCAAAAATGGAGAGGATATTCATAACTGGTGTTCTTGATGAACTAAAGGTCTGCGTCAGTTATAGTTATCAGCGTGACCAAAATATCATGAAGGTGCTCCTAACTGAAGAAGGGCGCTTATTTGAACTTCGAGCGATAGGTGGTCAGGTTGAGGTATCAGTTAGATCGAGTGACATCTTTATTGGAACTGTTTTAAAATCTTTGGAGATTGAAGACTTGGTTTCTGGGCACACCCTCTCCCAGCCGCGTTATCTGGCAAGATCATTCATCCATAGTGCAGAAACACTTATAACCTCTGATGCCCCAGGAAATCAGAGTTTTGATGGTTCTGGTTCAATCCGTTCGGAAGGCGATGATAAATTCTATGAGGCAACAGATAATTTGGTCGACTCTGGAAATTTGATATTGAAATCTCCTAGTTTTACTCGTATTGCTGGTCTGCTCCCAAGTGATGGAGTTCAAACAACAAACGACATTGCGCTCGATGATTCAATGGATAGCTTTGTGAAAGCTCAAGTAGTTATCTATGACCAGAACTCTCCTCTGTATCATAATATGGATATGCAGGTCACAGTCACCCTGGCTACCTTATCATTTTTCTGTCGTCGACCAACAATTCTTGCAATAATGGAATTTGCAAATTCTATTACCATCAAGGATGAAAGCTGTGAAGCTTTCAGTGACAGTTCTTCAACAGCTGCTACGAATCATGACACCAGAGATGATGCAGTTGATGGTTCGCAATCAATGGCAGTCAGCAAGCCTGCTGTTAAAGGATTGCTGGGAAAGGGGAAGTCCAGAGTTGTATTTAATATAACATTAAATATGGCCCGTGCTCAGATTTTATTAATGAATGAGGATGAAACTAAACTTGCTGTTCTGTCACAAGATAATTTACTTACGGATATTAAGGTATTTCCATCCTCTTTTAGTATTAAGGCATCCCTCGGAAATCTTAAAGTAAGTGATGAGAGTCTTCCAAGCAGCCATATGTATTTCTGGGCGTGCGATATGAGAAATCCAGGTGGCAGCTCATTTGTTGAGTTGGTTTTCACTTCATTTAGTGCCGATGATGAAGACTTTGAAGGTTATGAGTATAGCCTCTATGGTCAGCTCTCAGAAGTACGCATTGTATATTTGAATCGATTTATCCAGGAGATTGTTAGTTATTTCATGGGTCTTGTTCCCAAAAACTCAAAAGGAGTCGTGAAGCTAAAAGATCAAGTGACAAATTCAGAGAAGTGGTTTACAACTAGTGATTTTGAAGGATCACCTGCTATAAAGTTGGATCTGTCTCTGAGGAAGCCTATTATATTGATGCCTAGGAGAACGGACAGTCTTGACTACTTGAAGCTTGACATTGTTCATATTACTGTGAAGAGCACCTCTCAATGGTTTGGTGGAAGCAGAAGTGACATTAATGCTGTTCATATGGAAGTATTAACAGTTCAGGTTGAGGATATCAATTTGAATGTTGGTTGTAAAGGAGAAATAGGTGAAAGCATAGTTCAAGATGTGAAGGGAGTATCTGTTGTGATTCAAAGGTCACTTAGAGACTTGATGCATCAAATACCAAATGTTGAGGTTCTAATCAAGATGGAGAAATTGAAGGCAGCTTTGTCAAACAGGGAATACCAGATTATTACCGATTGTGCTCAGTCTAATGTTTCTGAAACTTCACATACTGTGCCTCCATTGAACCTTGATTCTGTGACATCTTTAAGTGAGGGTGAAGCCATCACTCAGGATCCAAATGGTACTGCTTTTCCAATTGCAAGTGGGGAAGCCCGGGTCATGATGAAAGTTTGTGTCGTCATTGATTTGGTTGAATTGTGCTTACATACTGGTCTAGGGAGTCTTGCCACTGTGCAGGTTACTGGTGTATGGCTACTCTACAAGACAAATACCCTGGGGGAAGGTTTCCTGTCAGCAACACTCAAGGGTTTCACTGTTCTTGATGATCGTGACGGTACTAAAGAAGAGTTTAGGTTGGCGATAGGAAAGCCTGATAATATTGGTTCTTGTTCTGTAGATTCTGTGACTTATGATGACACCCAGCACATCACTGATGGAAATGTCGGAAACTTGAATGATATCAATTTAGTTCCTACAATGCTCATTGTCGATGCCAAATTTTGCCAGCTTTTAACATCAGTTTCATTATGCATCCAAAGGCCACAACTTCTTGTTGCACTTGATTTTCTGCTGGCTGTTGCTGAGTTTTTTGTTCCTACAGTCACCGATGCGCTGTCAACTGAAGAAGTAAAGAACTCTGTTTATGGAATTGATGCAATAATTTTGAACCAGTCTACTTACAAGCAACCCTCCACTGAATTATCTCTCACTCCATTAAGACCTTTGGTAGTTGATGATGAAAGATATGATCATTTTGTTTATGATGGTAATGGTGGAATATTGCATTTGAAAGATAGGCGGGGGTCCTATGTCTCTGGGCCTAGTACAGAGGCTATTATATACATAGGAGATGGGAAAAGATTGCAATTCAAAAATGTTGTTATCAAGAATGGGCTGTACTTAGATTCATGTATATCCATGGGAAGCAACAGTAGCTATTCAGCTTTAAAGGAAGATCAAGTCTACTTTGTGGGAGAGGATGAAGTTCCTAATTTGAGTTCCTCAAGAGAAAGTCCCAATAATCTGCCATCTCAAAGCATTGCAGTCAACAAATCAACGGAATTTATCATCGAGTTGCAGGTGGTTGGCCCAGAGCTGACATTTTATAATACATCCGAAAAACTTGGGGAATCACTGATGCTCTCTAACCAACTTTTACATGCTCAATTGGATGGATTCTGCAGGCTTGTTTTGAAAGGTGATACCATTGAGATGAATGCAAATGTGCTTGGTTTCACTATGGAGAGTAACGGAATAAGGATTTTGGAGCCTTTTGATATCTCTGTAAAATATTCTAATGCTTCTGGAAGGACCAATATACATCTATCTGTTTCAGATATATTTATGAATTTTTCATTCAGCATCCTAAGGCTGTTTTTAGCAGTTGAAGAGGATATTTTGGCCTTTTTAAGCACGACGTCAAAGAAAATAACAGTAGTCTGCTCGCAGTTTGACAAGATTGGAACAATAAAAGATCCCTCCAGTGACCAAATATATGCCTTTTGGAGACCTCATGCACCTCCTGGTTTTGCTGTTCTTGGGGATTATCTGACACCATTGGACAAGCCACCTACAAAGGCAGTTGTTGCTGTAAATACCAATTTTTCCAGAGTGAAGAAGCCCCTATCTTACAAACTAATTTGGCCACCTTTACCTTCTGGGGAGTCGTCTCTTGATGTTGTAAATGATTTGGATGCAATACCAAGTGGTGTCCTTTCTGATGAAAGTAGCTGCTCCATTTGGTTTCCTGAAGCGCCTGTTGGATATGTTGCATTGGGCTGTGTGGTTTGTCCCGGAAGAGGACAACCACCTTTATCTTCTGCTTTTTGTATCTCGGCTTCATTAGTTTCTCCTTGTGCCCTGAGGGACTGTATTGCAATTAACACCAATGATCAATATCAGTCAAGTTTAGCATTCTGGCGAGTGGATAATTCTGTTGGGACCTTTTTGCCAGCAGATCTTAATACTTCTAGCATCACAGGTAGAGCGTATGATTTGCGTCACATCATATTTGGATTTCCTGAAGCCTCTGCAAAATCATCCAATAGTTTGAATGCCCATACTTCTTCTCAAAGTCACAATCCGCAGTCAGAAAGATCAGAAACAGTAAACTCTGGTCGCCGGTATGAAGCTGTTGCTAGTTTTCGTTTGATATGGTGGAACCAAGGGTCAAATTCAAGAAAAAGGCTTTCTATATGGCGTCCAGTTGTTCCTCCGGGAATGATATACTTTGGTGATATTGCAGTGAAAGGGTATGAACCTCCAAATACCTGCATTGTTCTTCATGATACTGAAGATGAAGAGCTTTTTAAATCCCCTCTTGATTACCAAATTGTTGGGCAAATTAAAAAACAGAGGGGAATGGAGAGTGTGTCCTTTTGGCTTCCACAAGCTCCTCCAGGGTTTGTTTCCCTTGGTTGTATTGCATGTAAGGGGACACCTAAGCAATCTGATTTCAGCTCATTAAGATGCATTCGCAGTGATTTGGTAACTGGGGATGAATTTTTAGAGGAGAGTATATGGGATACATCTGATGCCAAGCTTACGAAAGATTCATTCAGTGTATGGGCAGTTGGCAATGAGTTGAGTACCTTTCTAGTTCGTGGTGGTTTGAAGAAACCTCCTAGAAGGTTTGCTTTAAAACTGGCTGATTCTAATGTATCAACTGGTTCAGATCTTACTGTAATAGATGCGGAAATTAGAACCTTTTCTGCAGCACTTTTTGATGACTATGGTGGCTTGATGGTTCCATTGTGTAATTTGTCTTTAAGTGGAATTGGGTTCGGTTTGCATGGAAGAACAGACTACTTGAATTCGACTGTGAGCTTCTCTTTGGCTGCTAGATCATATAATGATAAGTATGAAGTTTGGGAGCCTCTTGTTGAGCCGGTAGATGGATTCCTAAGATACCAATATGATCTCAATGCACCAAGTGCAACATCTCAGTTACGCGTTACATCGACTAGGGATCTGAACTTGAACGTTTCTGTGTCTAATGCTAATATGATAATTCAAGCTTATGCAAGCTGGAACAGTCTCGTTCATGTGCCTGAATATCATAAAAAAAGGGAAGCATTCTCTCCAACAGACGGTGACCGATCTGTTATTGACATCCATCACAGGAGAAACTACGATATAATCCCACAAAACAAGCTAGGTCAGGATATCTTTATTCGAGCTACTGAGTCAAGAGGACTTACAAGCATAATTAAGATGTCATCTGGAGATGTGAGGCCTGTAAAAGTTCCTGTTTCCAAGAATATGTTGGACTCTCATTTGAAAGGAAAACTTTTCCACAAAGTTAGAACAATGGTGACTTTCATCATAGTGGATGGGCAGTTCCCACGGGTTAGAGGGTTGACATCTCCCCATTATACCTTAGCAATCCGTCTCATTCCTGACCAGAGTCTCCCTAGTGAAACAGTGATTCACCAACAAAATGCACGCACTTGCGGAAGCAGCTCGAATCACCTCTCTCCAGAGCTTGAGTTGGTCAAATGGAATGAAATATTTTTCTTTAAAGTTGACGCTCCAGACTACTACTCAGTTGAATTACTTGTGACGGACATGGGGAAAGGGGTCCCTCTTGGATTCTTTTCAGCCCCTCTAAAGCAGATTGTGGGGAATTTTAATCATGATTCATATCCATATGATAATGTAAAGAAGTGGACATCCATTGAATTGTCCTCGGCAGAGTCTATGGATAATAACCATAAGAAATTGGGTGGGAAAATCAGATGTGCTGTATTGCTGTCACCAAGATCTGAAGGAGAGATAAGTGATCAATATGATAACAGTAAAACAAAATCTGGATTTATCCAGATCAGTCCGAGAAGGGAAGGACCTTGGACTACTGTGAGGCTAAACTATGCTGCCCCAGCTGCATGTTGGCGGTTAGGCAATGATGTTGTTGCTAGTGAAGTACGTGTAAGGGATGGCAATAGATATGTGAATATTAGGTCTCTTGTTTCAGTACGTAACAGTACCGATTTTGTGCTTGATTTGTGTCTTGTACCGAATGTTTCTATGGAAAACGTGAGTTCAACAGACAATTCAAGTACTCCCGAGGGTTTACAGACCCATAGCAACAAATTTCAGACAGATGAGTTCCTTGAAACTGAAAAGTACAGCCCGACCACTGGCTGGGTTGGCTCCATGATTCAACCAAGCCAAGATATGATTGAAGGTGGAGGATCCCATCAGGAATTTCCTACAGTTGAGTTACCACCAGGCTGGGAATGGGTTGATGATTGGCATTTGGATATGGCATCTATTGACACTGCTGATGGCTGGGTCTATGCTCCAGATATTGAAAGTCTAAAATGGCCCGAGTCATTTGATCCATTACGGTTTGTGAACTATGCAAGGCAAAGGAGATGGATCAGGAATAGGAAACAAAGTACTACTAATCAGGAAATATATGTTGGAACTTTGAAACCTGGAGATACCATACCCCTTCCTCTATGTGGGTTGACACAACCTGGATTGTATGTCTTGCGTTTAAGGCCTTCTGATCTTAGCAATCATGATGAGTATTCTTGGAGTTCAGTTGTGGATGGGTCTGAACAACCAGAAGAGTCTGGTTCGTCAAAAGTATGTCCTGAGATAAGTGTATCGTCTCTCACTGAGTCAGAGAAACTGTTGTATTGCTCACAGATAAGTAGTACTTCTTCAAGTGGTTCCCACAAATTGTGGTTTTGTATGAGTATACAAGCGACAGAAATTGCAAAAGACATTCATTCTGATCCTATCCAGGATTGGAATCTTGTGGTTAAGTCCCCGCTATCTATCTCCAATTTTCTTCCCCTTGCAGCTGAGTTTTCTGTTCTTGAGATGCAAGAAAATGGTGGTTTTGTTGCCTGCTTCAGAGGGGTGTTTTTTCCAGGAAAGACTGTGAATGTTTTTAGTGCTGACATAAGAAAACCTTTATACTTTTCACTGCTTCCACAAAGAGGATGGTTGCCCATCCATGAAGCTGTCCTTTTGTCCCATCCTCATGAAGTTTCATCAAAAACAATAAACTTGAGAAGTTCGATATCTGGAAGGATTGTTCAAATTATTCTTGAGCAGAATTCCGTTGAAGAGCGTCCACTGCAGGCTAAGATCATTAGACTCTATGCTCCTTATTGGTTTTCAATTGCTAGGTGTCCTCCTCTCACATTCAGGCTTGTAGATATAGAAGGGAAGAAAAATACACGAAAGATAGGTGGTTTATTTCAGTCTAAAAAGATTAACGAAGTTGTCCTAGAGGAAATAACTGAAGAGGAAATATATGAAGGTCATACAATTGCTTCAGCTCTGAATTTTAAAATGCTGGGCCTTGCTGTGTCGATTGATCAATCTGGCAACAAGCAGTTTGGACCTGTTAAAGATCTTTCTCCGCTTGGTGACATGGATGGATCATTGGATGTTCCTGCTTATGATGGCGAAGGCAATTGCATGCAGCTTTTTATTACCACGAAACCATGCCTGTATCAATCTGTTCCTACAAAGGTAATATCTGTCCGACCATTTATGACCTTCACCAACAGACTTGGTCGTGATGTATATATCAAGTTATGCAGCGAGGATGAACCAAAAGTCCTTCGTCCATGTGATTCAAGAATATCATTTGTATACCGTGTATCAGATGGACCTAATAAACTTCAGGTTCGATTAGGAGACACCAACTGGTCATTTCCTATTCAAATTGTAAAAGAGGACACAATTTCTCTTGTTTTAAGGAGGCATAATGGTACTCGGACATTTTTGAGGACAGAAATTCGGGGATATGAAGAAGGCTCACGTTTCATCGTTGTATTCCGCCTTGGATCATCTAATGGTCCTATCAGAATCGAGAACAGAACTGTCAGCAAAACACTTAGCATTCGCCAGTCTGGGTTTGGTGAAGATGCGTGGGTTCCTCTAGAACCTTTTTCAACAACAAATTTTGCTTGGGAGGACCCATATGGCCAAAGATTCATAGAAGCTAAGGTCGACAATGATCTCTCCACTGGAGTTTGGGAACTTGATTTGGAAACAACAGGCATATGTTCTTCTGAGGAACTCGGATTGCAATTTCATGTTGTAGAAATTGGTGATATCAGGATAGCAAGGTTCAGTGACACCAGAACTACAGATGCAAGTTTGCATGAACAAATTAGGTCTCTGCAACTTGCTGAAAATTGCGGACCTTCTAACCTGCAGAATACGAATCAGAATAATGGTGCCTCACCTCTTGAGCTTATAATTGAGTTTGGAGTTGTAGGGCTTTCAATTATAGACCATAGACCAAAGGAGGTCTCCTACTTCTATTTTGAGAGAGTCTTCGTATCATATTCAACAGGCTATGATGGTGGGATGACAAGCAGGTTTAAGCTCATATTGGGTCACGTGCAGCTGGACAACCAGCTCCCTCTAACATTGATGCCAGTGTTGTTGGCTCCTGAGCCGAACTCTGATATGCATCATCCTGTTGTCAAGATGACTATAACAATGCGTAATGAAAATACTGATGGCATCCAGGTCTACCCTTATATTTATATCCGGGTGACTGAGAAGTGTTGGAGGCTTAATATTCACGAACCAATAATTTGGGCTTTGGTGGATCTGTACAATAATCTACAGTTAGATCGTCTGCCTAAAAGTTCTAGTGTCACAGAAGTTGATCCAGAAATACGCATCGACCTAGTAGACATTTCAGAAGTTAGGCTAAAGGTGTCACTGGAAACAGCACCAGCTCAGAGACCTCATGGGGTTCTAGGAGTATGGAGCCCAATACTATCTGCAGTTGGAAATGCATTCAAGATTCAGGTGCATCTGAGGAGGGTGATGCACAAAGACAGATTCATGCGGAGAAGTTCCATTGTCTCTGCCATTGGTAACCGCGTTTGGAGAGACTTGATCCATAATCCTCTACATTTGATATTTTCAGTTGATGTTCTTGGTATGACAAGTTCAACTTTGGCTTCTCTTAGTAAAGGGTTTGCTGAGCTCTCAACTGATGGGCAGTTTACTCACCTACGGTCAAAACAGGTATTTTCAAGGAGAATTACGGGGGTGGGTGATGGAATCATTCAAGGCACAGAAGCATTTGTGCAAGGTGTTGCTTTTGGCGTATCTGGAGTAGTGAAAAAGCCAGTTGAGAGTGCAAGACAGAATGGTCTGTCAGGACTTGTTCATGGGATTGGACGTGCATTCCTGGGAGTTATTGTGCAACCAATGAGTGGGGCATTGGACTTTTTCTCCTTGACTGTTGATGGAATTGGAGCAAGTTGTTCGAAATGCCTAGAGGTCTTCAATAGAAAGACAACATTCCAGAGAATTAGAAACCCCCGGGCAATCCGTGCCAATGGTATACTTACAGAGTATTCTGAGAGAGAGGCAGTTGGACAGATGATTTTATACCTTGCAGAAGCACATCGGCACTTTGGTTGTACTGAAATATTCAAGGAGCCCTCAAAGTTTGCTTGGTCTGATTATTATGAAGAGCATTTTGTTGTGCCTTACCAGCGGATTGTTTTAGTGACCAATAAGCGAGTGATGTTGCTTCAGTGTTTGGCTCCAGACAAAATGGACAAGAAACCGTGCAAGATTATGTGGGATGTGCCTTGGGAAGAGCTTATGGCAGTGGAGTTGGCTAAAGCAGGTCACAATCAGCCATCTCACTTGATCCTCCACCTCAAAAGTTTTAGGAGATCAGAGAATTTTGTCCGGGTCATCAAGTGCAGTGTTGAAGATGAAGTAGAGGGAAGGGAACCCCAGGCTGTTAGGATCTGTTCTGCAGTATGTAGGATGTGGAAAGCAAACCAGTCTGCCATGAAAAGCCTGATGTTGAAGGTTCCATCAAGTCAGCGACATGTGTATTTTGCCTGGTCTGAAGCCGAGGGGAGAGAAAAACGTACTCTGAACAAAGCAGTGACTAGGCTGAGAGAGCTCCCGTCATACAGTTCTGCATCAGATGGTAGAAGATTTGTTAAACACAGCATCAACTTTTCAAAGATTTGGAGCAGTGAACAAGAATCCAGAGGTCGATGCACATTGTGCAAAAAGCAGGTTTTGGAAGATGCTGGATTATGTAGCATTTGGAGACCCATTTGTCCCGACGGGTATGTCTCTATTGGAGATATTGCTCACATTGGCAGCCATCCTCCAAACGTTGCTGCAGTTTACCGTAAAATTGACAGGTTGTTTGCACTTCCAGTTGGATACGACCTGGTGTGGAGAAATTGTTTGGATGACTATGCAACACCAGTATCAATTTGGCATCCTAGAGCTCCAGAAGGATTTGTATCTCCTGGATGCATAGCTGTGGCTGGTTTTGTTGAGCCAGAACCTGATTTGGTTCACTGTGTTGCTATATCACTTGCTGAGGAGACAGAATTTGAAGAGCAAAAGGTTTGGTCAGCTTCAGATTCTTATCCATGGGCATGTCACATTTATCAAGTCCGCAGTGAAGCTCTTCACTTCGTGGCATTAAGAACAAGCAAGGAAGAATCTGACTGGAAACCTATGAGGATTCTTGATGATCCTCAGCCCCTATTGCAGTCATTGAAAGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rubis-subs-bind SET

Protein Analysis

4337

Amino Acids

484.51

Weight (kDa)

5.71

Isoelectric Point (pI)

43.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 537 1.1e-102 VPS13-like family N-terminal region
VPS13_N PF12624 558 - 673 7e-10 VPS13-like family N-terminal region
PH PF00169 802 - 910 2.1e-06 PH domain
VPS13_M PF25033 1318 - 1965 7e-10 VPS13-like family middle region
Vps62 PF06101 1971 - 2132 4.1e-10 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2201 - 2348 3.2e-11 Vacuolar protein sorting-associated protein 62
Pex24p PF06398 2891 - 2952 5.6e-06 Integral peroxisomal membrane peroxin
VPS13_VAB PF25036 2938 - 3200 3.5e-08 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_VAB PF25036 3298 - 3474 2e-08 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3925 - 4033 1e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1772, 3125, 5577, 10697
AarI CACCTGC 2 cut(s) 4117, 5539
AasI GACNNNNNNGTC 3 cut(s) 11610, 12546, 12560
AatII GACGTC 2 cut(s) 2372, 5891
Acc36I ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
Acc65I GGTACC 2 cut(s) 36, 2018
AccB1I GGYRCC 4 cut(s) 36, 2018, 2281, 10676
AccB7I CCANNNNNTGG 3 cut(s) 3287, 8613, 11675
AccII CGCG 4 cut(s) 1928, 3082, 7422, 11337
AclI AACGTT 3 cut(s) 2222, 7452, 12606
AcoI YGGCCR 3 cut(s) 220, 6113, 10420
AcvI CACGTG 1 cut(s) 10843
AcyI GRCGYC 3 cut(s) 2369, 5888, 6670
AdeI CACNNNGTG 3 cut(s) 7403, 12492, 12919
AflII CTTAAG 1 cut(s) 197
AflIII ACRYGT 4 cut(s) 973, 7420, 8395, 12307
AhlI ACTAGT 1 cut(s) 4088
AjiI CACGTC 1 cut(s) 11642
AjuI GAANNNNNNNTTGG 4 cut(s) 6213, 6245, 8877, 8909
AleI CACNNNNGTG 1 cut(s) 1697
AloI GAACNNNNNNTCC 6 cut(s) 7793, 7825, 9504, 9536, 10035, 10067
Alw21I GWGCWC 8 cut(s) 583, 2934, 3673, 4220, 4492, 11445, 12387, 12727
Alw44I GTGCAC 1 cut(s) 579
AlwNI CAGNNNCTG 5 cut(s) 90, 1327, 2747, 2786, 12785
Ama87I CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
ApaLI GTGCAC 1 cut(s) 579
ArsI GACNNNNNNTTYG 6 cut(s) 865, 897, 1694, 1726, 12623, 12655
AseI ATTAAT 2 cut(s) 3683, 4254
Asp700I GAANNNNTTC 2 cut(s) 7177, 12909
Asp718I GGTACC 2 cut(s) 36, 2018
AspA2I CCTAGG 2 cut(s) 995, 4157
AspLEI GCGC 7 cut(s) 367, 1860, 2472, 2952, 3316, 5083, 6226
AsuC2I CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
AsuII TTCGAA 2 cut(s) 2693, 11729
AvaI CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
AvrII CCTAGG 2 cut(s) 995, 4157
AxyI CCTNAGG 2 cut(s) 5837, 6332
BaeGI GKGCMC 3 cut(s) 583, 3066, 6331
BaeI ACNNNNGTAYC 2 cut(s) 12687, 12720
BalI TGGCCA 3 cut(s) 222, 6115, 10422
BamHI GGATCC 4 cut(s) 226, 404, 4582, 8663
BanI GGYRCC 4 cut(s) 36, 2018, 2281, 10676
BanII GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
BarI GAAGNNNNNNTAC 6 cut(s) 1001, 1033, 6292, 6324, 9124, 9156
BauI CACGAG 1 cut(s) 2628
BbrPI CACGTG 1 cut(s) 10843
BbsI GAAGAC 6 cut(s) 1371, 3054, 3803, 3918, 10768, 11737
Bbv12I GWGCWC 8 cut(s) 583, 2934, 3673, 4220, 4492, 11445, 12387, 12727
BbvCI CCTCAGC 2 cut(s) 12819, 12981
BcgI CGANNNNNNTGC 4 cut(s) 10, 44, 11709, 11743
BciVI GTATCC 4 cut(s) 890, 1810, 6988, 12650
BclI TGATCA 6 cut(s) 411, 1762, 5218, 6361, 8251, 9805
BcnI CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
BcuI ACTAGT 1 cut(s) 4088
BfoI RGCGCY 3 cut(s) 2473, 2953, 6227
BfrI CTTAAG 1 cut(s) 197
BfuAI ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
BfuI GTATCC 4 cut(s) 890, 1810, 6988, 12650
BglII AGATCT 7 cut(s) 1133, 2343, 2374, 6427, 7144, 8231, 9841
BlnI CCTAGG 2 cut(s) 995, 4157
BlpI GCTNAGC 3 cut(s) 267, 1866, 11439
BmcAI AGTACT 3 cut(s) 8530, 8872, 9136
BmeT110I CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
BmgBI CACGTC 1 cut(s) 11642
BmrI ACTGGG 2 cut(s) 582, 6972
BmuI ACTGGG 2 cut(s) 582, 6972
BoxI GACNNNNGTC 3 cut(s) 1143, 1959, 7875
BpiI GAAGAC 6 cut(s) 1371, 3054, 3803, 3918, 10768, 11737
BplI GAGNNNNNCTC 4 cut(s) 4207, 4239, 10889, 10921
Bpu10I CCTNAGC 7 cut(s) 1719, 6912, 7849, 10440, 10896, 12819, 12981
Bpu1102I GCTNAGC 3 cut(s) 267, 1866, 11439
Bpu14I TTCGAA 2 cut(s) 2693, 11729
BpuMI CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
Bsa29I ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
BsaAI YACGTR 5 cut(s) 52, 1097, 8396, 8447, 10843
BsaHI GRCGYC 3 cut(s) 2369, 5888, 6670
BsaI GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
Bse118I RCCGGY 3 cut(s) 2712, 6591, 7357
Bse21I CCTNAGG 2 cut(s) 5837, 6332
Bse3DI GCAATG 6 cut(s) 674, 2543, 3309, 5508, 7054, 8377
BseCI ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
BseMI GCAATG 6 cut(s) 674, 2543, 3309, 5508, 7054, 8377
BseRI GAGGAG 8 cut(s) 2366, 2369, 3366, 6855, 6995, 9612, 11287, 12836
BseSI GKGCMC 3 cut(s) 583, 3066, 6331
BseYI CCCAGC 9 cut(s) 2308, 3075, 3616, 4890, 8347, 8613, 8703, 8760, 9784
BsgI GTGCAG 6 cut(s) 353, 1853, 3132, 4724, 10865, 12196
Bsh1236I CGCG 4 cut(s) 1928, 3082, 7422, 11337
BshNI GGYRCC 4 cut(s) 36, 2018, 2281, 10676
BshVI ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
BsiHKAI GWGCWC 8 cut(s) 583, 2934, 3673, 4220, 4492, 11445, 12387, 12727
BsiHKCI CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
BsmBI CGTCTC 5 cut(s) 2360, 2424, 6144, 7865, 9093
BsmI GAATGC 9 cut(s) 148, 5692, 6383, 6529, 6942, 7544, 10335, 11249, 11645
Bso31I GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
BsoBI CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
Bsp119I TTCGAA 2 cut(s) 2693, 11729
Bsp1407I TGTACA 2 cut(s) 307, 11061
Bsp1720I GCTNAGC 3 cut(s) 267, 1866, 11439
Bsp19I CCATGG 4 cut(s) 206, 650, 5388, 12872
BspDI ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
BspFNI CGCG 4 cut(s) 1928, 3082, 7422, 11337
BspHI TCATGA 8 cut(s) 2818, 2922, 3544, 4629, 6754, 8104, 8995, 9466
BspMI ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
BspQI GCTCTTC 8 cut(s) 1455, 4208, 6765, 9546, 11931, 12060, 12831, 12915
BspT104I TTCGAA 2 cut(s) 2693, 11729
BspT107I GGYRCC 4 cut(s) 36, 2018, 2281, 10676
BspTI CTTAAG 1 cut(s) 197
BspTNI GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
BsrDI GCAATG 6 cut(s) 674, 2543, 3309, 5508, 7054, 8377
BsrFI RCCGGY 3 cut(s) 2712, 6591, 7357
BsrGI TGTACA 2 cut(s) 307, 11061
BssAI RCCGGY 3 cut(s) 2712, 6591, 7357
BssNAI GTATAC 3 cut(s) 9179, 10087, 11807
BssNI GRCGYC 3 cut(s) 2369, 5888, 6670
BssSI CACGAG 1 cut(s) 2628
Bst1107I GTATAC 3 cut(s) 9179, 10087, 11807
Bst2BI CACGAG 1 cut(s) 2628
BstACI GRCGYC 3 cut(s) 2369, 5888, 6670
BstAFI CTTAAG 1 cut(s) 197
BstAPI GCANNNNNTGC 6 cut(s) 143, 1548, 6056, 7403, 11795, 12492
BstAUI TGTACA 2 cut(s) 307, 11061
BstBAI YACGTR 5 cut(s) 52, 1097, 8396, 8447, 10843
BstBI TTCGAA 2 cut(s) 2693, 11729
BstDSI CCRYGG 5 cut(s) 206, 650, 5388, 7814, 12872
BstEII GGTNACC 2 cut(s) 7562, 11330
BstFNI CGCG 4 cut(s) 1928, 3082, 7422, 11337
BstH2I RGCGCY 3 cut(s) 2473, 2953, 6227
BstHHI GCGC 7 cut(s) 367, 1860, 2472, 2952, 3316, 5083, 6226
BstNSI RCATGY 8 cut(s) 659, 977, 5633, 6900, 8358, 9913, 12311, 12882
BstPAI GACNNNNGTC 3 cut(s) 1143, 1959, 7875
BstPI GGTNACC 2 cut(s) 7562, 11330
BstSLI GKGCMC 3 cut(s) 583, 3066, 6331
BstSNI TACGTA 2 cut(s) 1097, 8447
BstUI CGCG 4 cut(s) 1928, 3082, 7422, 11337
BstV2I GAAGAC 6 cut(s) 1371, 3054, 3803, 3918, 10768, 11737
BstXI CCANNNNNNTGG 4 cut(s) 693, 6806, 8703, 11043
BstZ17I GTATAC 3 cut(s) 9179, 10087, 11807
Bsu15I ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
Bsu36I CCTNAGG 2 cut(s) 5837, 6332
BsuI GTATCC 4 cut(s) 890, 1810, 6988, 12650
BsuTUI ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
BtgI CCRYGG 5 cut(s) 206, 650, 5388, 7814, 12872
BtgZI GCGATG 1 cut(s) 3201
BtrI CACGTC 1 cut(s) 11642
BveI ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
CaiI CAGNNNCTG 5 cut(s) 90, 1327, 2747, 2786, 12785
CciI TCATGA 8 cut(s) 2818, 2922, 3544, 4629, 6754, 8104, 8995, 9466
CfoI GCGC 7 cut(s) 367, 1860, 2472, 2952, 3316, 5083, 6226
Cfr10I RCCGGY 3 cut(s) 2712, 6591, 7357
Cfr9I CCCGGG 2 cut(s) 4623, 11784
ClaI ATCGAT 4 cut(s) 1545, 1845, 2323, 3979
CseI GACGC 5 cut(s) 2878, 6458, 6659, 8006, 9545
CsiI ACCWGGT 1 cut(s) 12663
DraI TTTAAA 7 cut(s) 709, 3030, 5418, 6781, 7110, 7990, 9778
DraIII CACNNNGTG 3 cut(s) 7403, 12492, 12919
DrdI GACNNNNNNGTC 3 cut(s) 11610, 12546, 12560
DseDI GACNNNNNNGTC 3 cut(s) 11610, 12546, 12560
EaeI YGGCCR 3 cut(s) 220, 6113, 10420
EciI GGCGGA 1 cut(s) 10262
Ecl136II GAGCTC 3 cut(s) 11443, 12385, 12725
Eco105I TACGTA 2 cut(s) 1097, 8447
Eco147I AGGCCT 2 cut(s) 7705, 8977
Eco24I GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
Eco31I GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
Eco32I GATATC 7 cut(s) 1924, 4297, 4930, 5749, 7636, 9507, 10552
Eco53kI GAGCTC 3 cut(s) 11443, 12385, 12725
Eco72I CACGTG 1 cut(s) 10843
Eco81I CCTNAGG 2 cut(s) 5837, 6332
Eco88I CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
Eco91I GGTNACC 2 cut(s) 7562, 11330
EcoICRI GAGCTC 3 cut(s) 11443, 12385, 12725
EcoO109I RGGNCCY 7 cut(s) 73, 2744, 5274, 6411, 8050, 8312, 10411
EcoO65I GGTNACC 2 cut(s) 7562, 11330
EcoRI GAATTC 2 cut(s) 7282, 9541
EcoRV GATATC 7 cut(s) 1924, 4297, 4930, 5749, 7636, 9507, 10552
EcoT22I ATGCAT 6 cut(s) 4401, 5003, 6944, 10917, 11251, 12755
EcoT38I GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
Esp3I CGTCTC 5 cut(s) 2360, 2424, 6144, 7865, 9093
FauI CCCGC 4 cut(s) 499, 2712, 5262, 9258
FauNDI CATATG 5 cut(s) 3825, 4266, 8119, 10417, 10499
FbaI TGATCA 6 cut(s) 411, 1762, 5218, 6361, 8251, 9805
FriOI GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
GlaI GCGC 7 cut(s) 366, 1859, 2471, 2951, 3315, 5082, 6225
GsaI CCCAGC 9 cut(s) 2312, 3079, 3620, 4894, 8351, 8617, 8707, 8764, 9788
HaeII RGCGCY 3 cut(s) 2473, 2953, 6227
HgaI GACGC 5 cut(s) 2878, 6458, 6659, 8006, 9545
HhaI GCGC 7 cut(s) 367, 1860, 2472, 2952, 3316, 5083, 6226
Hin1I GRCGYC 3 cut(s) 2369, 5888, 6670
Hin6I GCGC 7 cut(s) 365, 1858, 2470, 2950, 3314, 5081, 6224
HinP1I GCGC 7 cut(s) 365, 1858, 2470, 2950, 3314, 5081, 6224
HincII GTYRAC 9 cut(s) 661, 3223, 3443, 5088, 5518, 7830, 7996, 8943, 10447
HindII GTYRAC 9 cut(s) 661, 3223, 3443, 5088, 5518, 7830, 7996, 8943, 10447
HindIII AAGCTT 5 cut(s) 1493, 3507, 4187, 7010, 7485
HpaI GTTAAC 1 cut(s) 661
Hpy99I CGWCG 3 cut(s) 3444, 5890, 12557
Hsp92I GRCGYC 3 cut(s) 2369, 5888, 6670
HspAI GCGC 7 cut(s) 365, 1858, 2470, 2950, 3314, 5081, 6224
KflI GGGWCCC 1 cut(s) 8050
KpnI GGTACC 2 cut(s) 40, 2022
Ksp22I TGATCA 6 cut(s) 411, 1762, 5218, 6361, 8251, 9805
KspAI GTTAAC 1 cut(s) 661
LguI GCTCTTC 8 cut(s) 1455, 4208, 6765, 9546, 11931, 12060, 12831, 12915
MabI ACCWGGT 1 cut(s) 12663
MfeI CAATTG 6 cut(s) 1758, 4605, 5636, 9606, 9756, 9904
MlsI TGGCCA 3 cut(s) 222, 6115, 10422
MluI ACGCGT 1 cut(s) 7420
MluNI TGGCCA 3 cut(s) 222, 6115, 10422
Mox20I TGGCCA 3 cut(s) 222, 6115, 10422
Mph1103I ATGCAT 6 cut(s) 4401, 5003, 6944, 10917, 11251, 12755
MroXI GAANNNNTTC 2 cut(s) 7177, 12909
MscI TGGCCA 3 cut(s) 222, 6115, 10422
Msp20I TGGCCA 3 cut(s) 222, 6115, 10422
MspA1I CMGCKG 9 cut(s) 506, 946, 1826, 2467, 3533, 8351, 9284, 10849, 11962
MspCI CTTAAG 1 cut(s) 197
MunI CAATTG 6 cut(s) 1758, 4605, 5636, 9606, 9756, 9904
Mva1269I GAATGC 9 cut(s) 148, 5692, 6383, 6529, 6942, 7544, 10335, 11249, 11645
MvnI CGCG 4 cut(s) 1928, 3082, 7422, 11337
NciI CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
NcoI CCATGG 4 cut(s) 206, 650, 5388, 12872
NdeI CATATG 5 cut(s) 3825, 4266, 8119, 10417, 10499
NmeAIII GCCGAG 3 cut(s) 6284, 8138, 12358
NsiI ATGCAT 6 cut(s) 4401, 5003, 6944, 10917, 11251, 12755
NspI RCATGY 8 cut(s) 659, 977, 5633, 6900, 8358, 9913, 12311, 12882
NspV TTCGAA 2 cut(s) 2693, 11729
OliI CACNNNNGTG 1 cut(s) 1697
PaeI GCATGC 1 cut(s) 9913
PaeR7I CTCGAG 1 cut(s) 1273
PagI TCATGA 8 cut(s) 2818, 2922, 3544, 4629, 6754, 8104, 8995, 9466
PaqCI CACCTGC 2 cut(s) 4117, 5539
PasI CCCWGGG 1 cut(s) 4744
PceI AGGCCT 2 cut(s) 7705, 8977
PciI ACATGT 2 cut(s) 973, 12307
PciSI GCTCTTC 8 cut(s) 1455, 4208, 6765, 9546, 11931, 12060, 12831, 12915
PcsI WCGNNNNNNNCGW 1 cut(s) 2320
PctI GAATGC 9 cut(s) 148, 5692, 6383, 6529, 6942, 7544, 10335, 11249, 11645
PdmI GAANNNNTTC 2 cut(s) 7177, 12909
PflFI GACNNNGTC 1 cut(s) 10005
PflMI CCANNNNNTGG 3 cut(s) 3287, 8613, 11675
PfoI TCCNGGA 6 cut(s) 3987, 6262, 6685, 9222, 9352, 12745
PmaCI CACGTG 1 cut(s) 10843
PmlI CACGTG 1 cut(s) 10843
Ppu21I YACGTR 5 cut(s) 52, 1097, 8396, 8447, 10843
PpuMI RGGWCCY 6 cut(s) 2744, 5274, 6411, 8050, 8312, 10411
PscI ACATGT 2 cut(s) 973, 12307
PshAI GACNNNNGTC 3 cut(s) 1143, 1959, 7875
PshBI ATTAAT 2 cut(s) 3683, 4254
PsiI TTATAA 4 cut(s) 1772, 3125, 5577, 10697
Psp124BI GAGCTC 3 cut(s) 11445, 12387, 12727
Psp1406I AACGTT 3 cut(s) 2222, 7452, 12606
Psp5II RGGWCCY 6 cut(s) 2744, 5274, 6411, 8050, 8312, 10411
PspCI CACGTG 1 cut(s) 10843
PspEI GGTNACC 2 cut(s) 7562, 11330
PspFI CCCAGC 9 cut(s) 2308, 3075, 3616, 4890, 8347, 8613, 8703, 8760, 9784
PspPPI RGGWCCY 6 cut(s) 2744, 5274, 6411, 8050, 8312, 10411
PspXI VCTCGAGB 1 cut(s) 1273
PsrI GAACNNNNNNTAC 4 cut(s) 4266, 4298, 11389, 11421
PstNI CAGNNNCTG 5 cut(s) 90, 1327, 2747, 2786, 12785
PsyI GACNNNGTC 1 cut(s) 10005
PvuII CAGCTG 5 cut(s) 1826, 3533, 8351, 9284, 10849
SacI GAGCTC 3 cut(s) 11445, 12387, 12727
SalI GTCGAC 3 cut(s) 3221, 3441, 10445
SapI GCTCTTC 8 cut(s) 1455, 4208, 6765, 9546, 11931, 12060, 12831, 12915
ScaI AGTACT 3 cut(s) 8530, 8872, 9136
SexAI ACCWGGT 1 cut(s) 12663
Sfr274I CTCGAG 1 cut(s) 1273
SfuI TTCGAA 2 cut(s) 2693, 11729
SlaI CTCGAG 1 cut(s) 1273
SmaI CCCGGG 2 cut(s) 4625, 11786
SnaBI TACGTA 2 cut(s) 1097, 8447
SpeI ACTAGT 1 cut(s) 4088
SphI GCATGC 1 cut(s) 9913
SseBI AGGCCT 2 cut(s) 7705, 8977
SspI AATATT 9 cut(s) 454, 1972, 4849, 5250, 5762, 7980, 8425, 11026, 11895
SstI GAGCTC 3 cut(s) 11445, 12387, 12727
StuI AGGCCT 2 cut(s) 7705, 8977
TaqII GACCGA 1 cut(s) 7581
TauI GCSGC 3 cut(s) 1931, 2470, 3082
TspMI CCCGGG 2 cut(s) 4623, 11784
Tth111I GACNNNGTC 1 cut(s) 10005
Van91I CCANNNNNTGG 3 cut(s) 3287, 8613, 11675
Vha464I CTTAAG 1 cut(s) 197
VneI GTGCAC 1 cut(s) 579
VspI ATTAAT 2 cut(s) 3683, 4254
XbaI TCTAGA 1 cut(s) 10375
XceI RCATGY 8 cut(s) 659, 977, 5633, 6900, 8358, 9913, 12311, 12882
XcmI CCANNNNNNNNNTGG 7 cut(s) 1909, 7732, 8355, 8706, 9423, 10349, 12708
XhoI CTCGAG 1 cut(s) 1273
XmaI CCCGGG 2 cut(s) 4623, 11784
XmaJI CCTAGG 2 cut(s) 995, 4157
XmnI GAANNNNTTC 2 cut(s) 7177, 12909
ZraI GACGTC 2 cut(s) 2370, 5889
ZrmI AGTACT 3 cut(s) 8530, 8872, 9136
Zsp2I ATGCAT 6 cut(s) 4401, 5003, 6944, 10917, 11251, 12755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.