Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003441

Physical Location & Seq

Genomic Coordinates Reverse (-)

37062509 .. 37080812

Gene Structure 18304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00313570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGCAGAAAAAAGATGACACGACGTGGTTTGTTAAAAAAGAGTGCCAATCACCCCTGGCTTTTATTGACACTCCCGATCGTGAAATTTTTGCGAGCTTGACATGCTGTTGTAACGAGAAATTTGAGAAAGAAAAAGGTGTTGTTGCCACTCGGCTTGTGGGTGAGAGGGCGCAAATTATTATAAATGAAGTGGCAGACTTGGGTCTTCGCACTCATCTTCAATGTCTAGAACACATTGGTAACATACTATTCTCTTCTCATGATCTTCCAATGATGGGATTTATAATGTTAGATAAACTTTTTTCGCTTATGGATCAGACTTCGGTTCTCGACAACCCAGATTCCTTGCAAAATCAAGAAGTCTTACTACCTGGCCATCTGATAACCATATATCTCAAGGTAGATGAAAAGCTGGAAAAATTAGAGGATTGGTTGCAAAGGACCAAAAAACTTCTTCAAGATGAGATGAAAAAGGAAAGCAACAATATCAATTTTGGCAGCGTCGATAGCTTAAAAAAGGTTCTGGAAAAAAATCCTACAAGGCAAATCAGTATGGCGATTGAGAATATGTTGAAAACTGGAAGAATTAATACTCAAACAGGTCTAGATTTGCAGCAGACTTTAATTGGAGTCATAAAAAGTCGAATAGGTCCCATACTGGCTATTTTATGCGGTTCATATCGCACACTGACCACAAAAGAATCTGTGCAGAGAATTCATCTTGAATCAGTTCCCGAGTGCAAAGCAACCGTTAGGTTTCATATTTTCAACATGCCCCTTAACTTCTGGCCGAACACCAGAATAAGTCAAATGGGTGCATCAAACTTTGGTTGGAATGACACCTTCACTGCCAATGTTGGTTCATGCTGGTCCTCCTCGCGGATCTTTCTCGTTCTTTTAGATGGTCGTCTTGTTGGTTATATATCTTCCAAACAAGTAGAGAGAGTTGTGGCTCATTTAAGGAAACCGAAAGTTTCAGCTGCTTCGTTGAGAGAAGTTCAGCAGATGGATCTCTCCAAGTCGTCCATATCCGAGACTCGGAGTATTCAACCATGGACTCCAGTTGGTGATGATCAGGCCGCGATAGCCGAAACAAATGTGTCTTTAATTTCTGGTTCGAAGAATGAAGCTGCAGCAATTAGCAACACAGGTTTAGGAGGCATGGATCCAGAGATATTCGCAGCAGCAGCCGGAGGAAATATTGAATCCCTTTCAACACATGGGAAGCTTCTGCATGAAATATTCACTCCAACCAAGAACACTGTCCTACATGTTTATGTAGCACACGCAAGCAACCTATACTCAACAAAAGCCGAAAAGTTAGACATCCTCATAAATAGCTCTTATCTACTTGCTCGTTTGCTCGGTGAGCTAATATCAAACTTATGGGACAGAATAAACACAGTTAGGCCAACTACCTTAACTGCATCCCAAGTACAGAGGTCAAAGGAGATTGTCACTCAGTTGCTAGAAATGTGTCCGAACTACTTTTACAGCCCAACAATAATGGCGACATTGCACTACACATTGCTGCCAGATATGGGCTTGATGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003824 GO:0003899 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005736 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006360 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009553 GO:0009561 GO:0009987 GO:0010467 GO:0016070 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0030880 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0034062 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0055029 GO:0061695 GO:0070013 GO:0071704 GO:0090304 GO:0097659 GO:0097747 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 map00230 map00240 map01100 map03020

Pfam Domains

Protein Families

RNA_pol_Rpa2_4 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_6 RNA_pol_Rpb2_7

Protein Analysis

518

Amino Acids

57.92

Weight (kDa)

6.87

Isoelectric Point (pI)

35.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57320 AT3G57320
fragaria_vesca	FvH4_6g24490 FvH4_6g24490 FvH4_6g24490 FvH4_6g24490
malus_domestica	MD12G1082300.v1.1 MD15G1429100.v1.1
prunus_persica	Prupe.7G053700_v2.0.a1
pyrus_communis	pycom12g06810
rosa_chinensis	RchiOBHm_Chr3g0483531 RchiOBHm_Chr3g0483541 RchiOBHm_Chr3g0483561
rosa_laevigata	RLG00000023267
rosa_multiflora	Rmu_sc0000555.1_g000025
rosa_roxburghii	Rroxscaffold_1G00036690 Rroxscaffold_3G00271510 Rroxscaffold_4G00313570 Rroxscaffold_6G00398230
rosa_rugosa	Rorug03G0206800 Rorug03G0206900
rosa_samantha	Rh3AG254900 Rh3AG255000 Rh3AG255100 Rh3BG292200 Rh3BG292300 Rh3BG292400 Rh3CG289700 Rh3CG289800 Rh3DG285600 Rh3DG285700 Rh3DG285800
rosa_wichuraiana	Rw0G005380 Rw3G023050 Rw3G023060 Rw7G011110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	182, 284
AccII	CGCG	2 cut(s)	880, 1082
AciI	CCGC	3 cut(s)	672, 880, 1080
AclWI	GGATC	5 cut(s)	321, 890, 1017, 1160, 1173
AcoI	YGGCCR	2 cut(s)	373, 788
AcsI	RAATTY	3 cut(s)	84, 119, 714
AdeI	CACNNNGTG	1 cut(s)	24
AfaI	GTAC	1 cut(s)	1437
AfiI	CCNNNNNNNGG	4 cut(s)	275, 879, 1038, 1541
AflIII	ACRYGT	1 cut(s)	1270
AgsI	TTSAA	8 cut(s)	221, 458, 574, 725, 769, 1049, 1205, 1215
AjiI	CACGTC	1 cut(s)	24
AjnI	CCWGG	2 cut(s)	54, 370
AluBI	AGCT	8 cut(s)	96, 412, 510, 980, 1130, 1228, 1341, 1372
AluI	AGCT	8 cut(s)	96, 412, 510, 980, 1130, 1228, 1341, 1372
Alw26I	GTCTC	1 cut(s)	1028
AlwI	GGATC	5 cut(s)	321, 890, 1017, 1160, 1173
Ama87I	CYCGRG	1 cut(s)	734
AoxI	GGCC	4 cut(s)	373, 788, 1077, 1409
ApeKI	GCWGC	9 cut(s)	498, 613, 980, 1130, 1133, 1181, 1184, 1187, 1531
ApoI	RAATTY	3 cut(s)	84, 119, 714
AseI	ATTAAT	1 cut(s)	588
Asp700I	GAANNNNTTC	1 cut(s)	729
AspLEI	GCGC	1 cut(s)	172
AspS9I	GGNCC	3 cut(s)	441, 650, 870
AsuHPI	GGTGA	4 cut(s)	42, 173, 1079, 1379
AsuII	TTCGAA	1 cut(s)	1118
AvaI	CYCGRG	1 cut(s)	734
AvaII	GGWCC	3 cut(s)	441, 650, 870
BalI	TGGCCA	1 cut(s)	375
BamHI	GGATCC	1 cut(s)	1165
BarI	GAAGNNNNNNTAC	4 cut(s)	351, 383, 574, 606
BbsI	GAAGAC	1 cut(s)	197
BbvI	GCAGC	9 cut(s)	510, 625, 967, 1117, 1145, 1193, 1196, 1199, 1518
BccI	CCATC	5 cut(s)	268, 384, 896, 1000, 1543
BciT130I	CCWGG	2 cut(s)	56, 372
BclI	TGATCA	1 cut(s)	1072
BcoDI	GTCTC	1 cut(s)	1028
BfaI	CTAG	3 cut(s)	227, 605, 1469
BfmI	CTRYAG	1 cut(s)	1131
Bme1390I	CCNGG	2 cut(s)	56, 372
Bme18I	GGWCC	3 cut(s)	441, 650, 870
BmeT110I	CYCGRG	1 cut(s)	734
BmgBI	CACGTC	1 cut(s)	24
BmgT120I	GGNCC	3 cut(s)	441, 650, 870
BmiI	GGNNCC	2 cut(s)	652, 1167
BmrFI	CCNGG	2 cut(s)	56, 372
BmsI	GCATC	2 cut(s)	827, 1436
BoxI	GACNNNNGTC	1 cut(s)	201
BpiI	GAAGAC	1 cut(s)	197
BpmI	CTGGAG	1 cut(s)	1044
Bpu14I	TTCGAA	1 cut(s)	1118
BpuEI	CTTGAG	1 cut(s)	380
BsaJI	CCNNGG	2 cut(s)	54, 1052
Bsc4I	CCNNNNNNNGG	4 cut(s)	275, 879, 1038, 1541
Bse1I	ACTGG	3 cut(s)	583, 663, 1061
Bse3DI	GCAATG	2 cut(s)	1514, 1526
BseBI	CCWGG	2 cut(s)	56, 372
BseDI	CCNNGG	2 cut(s)	54, 1052
BseGI	GGATG	2 cut(s)	1326, 1427
BseLI	CCNNNNNNNGG	4 cut(s)	275, 879, 1038, 1541
BseMI	GCAATG	2 cut(s)	1514, 1526
BseMII	CTCAG	1 cut(s)	1475
BseNI	ACTGG	3 cut(s)	583, 663, 1061
BseRI	GAGGAG	1 cut(s)	865
BseXI	GCAGC	9 cut(s)	510, 625, 967, 1117, 1145, 1193, 1196, 1199, 1518
BsgI	GTGCAG	1 cut(s)	728
Bsh1236I	CGCG	2 cut(s)	880, 1082
Bsh1285I	CGRYCG	1 cut(s)	79
BshFI	GGCC	4 cut(s)	375, 790, 1079, 1411
BsiEI	CGRYCG	1 cut(s)	79
BsiHKCI	CYCGRG	1 cut(s)	734
BsiSI	CCGG	1 cut(s)	1191
BslFI	GGGAC	2 cut(s)	636, 1403
BslI	CCNNNNNNNGG	4 cut(s)	275, 879, 1038, 1541
BsmAI	GTCTC	1 cut(s)	1028
BsmFI	GGGAC	2 cut(s)	636, 1403
BsnI	GGCC	4 cut(s)	375, 790, 1079, 1411
BsoBI	CYCGRG	1 cut(s)	734
Bsp119I	TTCGAA	1 cut(s)	1118
Bsp143I	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
Bsp19I	CCATGG	1 cut(s)	1052
BspACI	CCGC	3 cut(s)	672, 880, 1080
BspANI	GGCC	4 cut(s)	375, 790, 1079, 1411
BspCNI	CTCAG	1 cut(s)	1474
BspFNI	CGCG	2 cut(s)	880, 1082
BspHI	TCATGA	1 cut(s)	259
BspLI	GGNNCC	2 cut(s)	652, 1167
BspMAI	CTGCAG	1 cut(s)	1135
BspPI	GGATC	5 cut(s)	321, 890, 1017, 1160, 1173
BspT104I	TTCGAA	1 cut(s)	1118
BsrDI	GCAATG	2 cut(s)	1514, 1526
BsrI	ACTGG	3 cut(s)	583, 663, 1061
BssECI	CCNNGG	2 cut(s)	54, 1052
BssMI	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
BssT1I	CCWWGG	1 cut(s)	1052
Bst2UI	CCWGG	2 cut(s)	56, 372
Bst4CI	ACNGT	3 cut(s)	751, 1264, 1405
Bst6I	CTCTTC	1 cut(s)	259
BstBI	TTCGAA	1 cut(s)	1118
BstC8I	GCNNGC	2 cut(s)	94, 1291
BstDEI	CTNAG	1 cut(s)	1461
BstDSI	CCRYGG	1 cut(s)	1052
BstF5I	GGATG	2 cut(s)	1326, 1427
BstFNI	CGCG	2 cut(s)	880, 1082
BstHHI	GCGC	1 cut(s)	172
BstKTI	GATC	7 cut(s)	79, 265, 316, 885, 1012, 1075, 1168
BstMAI	GTCTC	1 cut(s)	1028
BstMBI	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
BstMCI	CGRYCG	1 cut(s)	79
BstMWI	GCNNNNNNNGC	5 cut(s)	102, 507, 1085, 1187, 1369
BstNI	CCWGG	2 cut(s)	56, 372
BstNSI	RCATGY	3 cut(s)	105, 775, 1274
BstPAI	GACNNNNGTC	1 cut(s)	201
BstSCI	CCNGG	2 cut(s)	54, 370
BstSFI	CTRYAG	1 cut(s)	1131
BstUI	CGCG	2 cut(s)	880, 1082
BstV1I	GCAGC	9 cut(s)	510, 625, 967, 1117, 1145, 1193, 1196, 1199, 1518
BstV2I	GAAGAC	1 cut(s)	197
BstX2I	RGATCY	3 cut(s)	882, 1009, 1165
BstYI	RGATCY	3 cut(s)	882, 1009, 1165
BsuRI	GGCC	4 cut(s)	375, 790, 1079, 1411
BtgI	CCRYGG	1 cut(s)	1052
BtrI	CACGTC	1 cut(s)	24
BtsCI	GGATG	2 cut(s)	1326, 1427
BtsI	GCAGTG	1 cut(s)	846
BtsIMutI	CAGTG	3 cut(s)	686, 846, 1260
Cac8I	GCNNGC	2 cut(s)	94, 1291
CciI	TCATGA	1 cut(s)	259
CfoI	GCGC	1 cut(s)	172
Cfr13I	GGNCC	3 cut(s)	441, 650, 870
CseI	GACGC	1 cut(s)	490
Csp6I	GTAC	1 cut(s)	1436
CspCI	CAANNNNNGTGG	2 cut(s)	136, 171
CviAII	CATG	9 cut(s)	102, 260, 772, 864, 1053, 1162, 1220, 1235, 1271
CviQI	GTAC	1 cut(s)	1436
DdeI	CTNAG	1 cut(s)	1461
DpnI	GATC	7 cut(s)	78, 264, 315, 884, 1011, 1074, 1167
DpnII	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
DraIII	CACNNNGTG	1 cut(s)	24
EaeI	YGGCCR	2 cut(s)	373, 788
Eam1104I	CTCTTC	1 cut(s)	259
EarI	CTCTTC	1 cut(s)	259
Eco130I	CCWWGG	1 cut(s)	1052
Eco47I	GGWCC	3 cut(s)	441, 650, 870
Eco88I	CYCGRG	1 cut(s)	734
EcoO109I	RGGNCCY	1 cut(s)	650
EcoRI	GAATTC	1 cut(s)	714
EcoRII	CCWGG	2 cut(s)	54, 370
EcoT14I	CCWWGG	1 cut(s)	1052
ErhI	CCWWGG	1 cut(s)	1052
FaeI	CATG	9 cut(s)	105, 263, 775, 867, 1056, 1165, 1223, 1238, 1274
FaqI	GGGAC	2 cut(s)	636, 1403
FatI	CATG	9 cut(s)	101, 259, 771, 863, 1052, 1161, 1219, 1234, 1270
FbaI	TGATCA	1 cut(s)	1072
FokI	GGATG	2 cut(s)	1313, 1414
FspBI	CTAG	3 cut(s)	227, 605, 1469
GlaI	GCGC	1 cut(s)	171
GsuI	CTGGAG	1 cut(s)	1044
HaeIII	GGCC	4 cut(s)	375, 790, 1079, 1411
HapII	CCGG	1 cut(s)	1191
HgaI	GACGC	1 cut(s)	490
HhaI	GCGC	1 cut(s)	172
Hin1II	CATG	9 cut(s)	105, 263, 775, 867, 1056, 1165, 1223, 1238, 1274
Hin6I	GCGC	1 cut(s)	170
HinP1I	GCGC	1 cut(s)	170
HindIII	AAGCTT	1 cut(s)	1226
HinfI	GANTC	7 cut(s)	341, 630, 701, 725, 1036, 1057, 1205
HpaII	CCGG	1 cut(s)	1191
HphI	GGTGA	4 cut(s)	42, 173, 1079, 1379
Hpy188I	TCNGA	5 cut(s)	318, 381, 1033, 1041, 1482
Hpy99I	CGWCG	2 cut(s)	25, 506
HpyAV	CCTTC	1 cut(s)	853
HpyCH4III	ACNGT	3 cut(s)	751, 1264, 1405
HpyCH4IV	ACGT	1 cut(s)	23
HpyF10VI	GCNNNNNNNGC	5 cut(s)	102, 507, 1085, 1187, 1369
HpyF3I	CTNAG	1 cut(s)	1461
HpySE526I	ACGT	1 cut(s)	23
Hsp92II	CATG	9 cut(s)	105, 263, 775, 867, 1056, 1165, 1223, 1238, 1274
HspAI	GCGC	1 cut(s)	170
Ksp22I	TGATCA	1 cut(s)	1072
Kzo9I	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
Lsp1109I	GCAGC	9 cut(s)	510, 625, 967, 1117, 1145, 1193, 1196, 1199, 1518
LweI	GCATC	2 cut(s)	827, 1436
MaeI	CTAG	3 cut(s)	227, 605, 1469
MaeII	ACGT	1 cut(s)	23
MaeIII	GTNAC	3 cut(s)	110, 239, 1456
MalI	GATC	7 cut(s)	78, 264, 315, 884, 1011, 1074, 1167
MboI	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
MboII	GAAGA	8 cut(s)	197, 209, 246, 257, 446, 594, 918, 1132
MflI	RGATCY	3 cut(s)	882, 1009, 1165
MlsI	TGGCCA	1 cut(s)	375
MluNI	TGGCCA	1 cut(s)	375
MlyI	GAGTC	3 cut(s)	639, 1030, 1051
MmeI	TCCRAC	2 cut(s)	812, 1274
MnlI	CCTC	8 cut(s)	159, 418, 883, 886, 1151, 1187, 1340, 1434
Mox20I	TGGCCA	1 cut(s)	375
MroXI	GAANNNNTTC	1 cut(s)	729
MscI	TGGCCA	1 cut(s)	375
MseI	TTAA	8 cut(s)	33, 512, 588, 623, 780, 959, 1106, 1421
MslI	CAYNNNNRTG	1 cut(s)	1275
Msp20I	TGGCCA	1 cut(s)	375
MspA1I	CMGCKG	1 cut(s)	980
MspI	CCGG	1 cut(s)	1191
MspR9I	CCNGG	2 cut(s)	56, 372
MvaI	CCWGG	2 cut(s)	56, 372
MvnI	CGCG	2 cut(s)	880, 1082
MwoI	GCNNNNNNNGC	5 cut(s)	102, 507, 1085, 1187, 1369
NcoI	CCATGG	1 cut(s)	1052
NdeII	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
NlaIII	CATG	9 cut(s)	105, 263, 775, 867, 1056, 1165, 1223, 1238, 1274
NlaIV	GGNNCC	2 cut(s)	652, 1167
NmeAIII	GCCGAG	1 cut(s)	130
NmuCI	GTSAC	1 cut(s)	1456
NspI	RCATGY	3 cut(s)	105, 775, 1274
NspV	TTCGAA	1 cut(s)	1118
PagI	TCATGA	1 cut(s)	259
PciI	ACATGT	1 cut(s)	1270
PdmI	GAANNNNTTC	1 cut(s)	729
PfeI	GAWTC	4 cut(s)	341, 701, 725, 1205
Ple19I	CGATCG	1 cut(s)	79
PleI	GAGTC	3 cut(s)	638, 1030, 1051
PpsI	GAGTC	3 cut(s)	638, 1030, 1051
PpuMI	RGGWCCY	1 cut(s)	650
PscI	ACATGT	1 cut(s)	1270
PshAI	GACNNNNGTC	1 cut(s)	201
PshBI	ATTAAT	1 cut(s)	588
PsiI	TTATAA	2 cut(s)	182, 284
Psp5II	RGGWCCY	1 cut(s)	650
Psp6I	CCWGG	2 cut(s)	54, 370
PspGI	CCWGG	2 cut(s)	54, 370
PspN4I	GGNNCC	2 cut(s)	652, 1167
PspPI	GGNCC	3 cut(s)	441, 650, 870
PspPPI	RGGWCCY	1 cut(s)	650
PsrI	GAACNNNNNNTAC	2 cut(s)	1475, 1507
PstI	CTGCAG	1 cut(s)	1135
PsuI	RGATCY	3 cut(s)	882, 1009, 1165
PvuI	CGATCG	1 cut(s)	79
PvuII	CAGCTG	1 cut(s)	980
RsaI	GTAC	1 cut(s)	1437
RsaNI	GTAC	1 cut(s)	1436
RseI	CAYNNNNRTG	1 cut(s)	1275
SaqAI	TTAA	8 cut(s)	33, 512, 588, 623, 780, 959, 1106, 1421
Sau3AI	GATC	7 cut(s)	76, 262, 313, 882, 1009, 1072, 1165
Sau96I	GGNCC	3 cut(s)	441, 650, 870
SchI	GAGTC	3 cut(s)	639, 1030, 1051
ScrFI	CCNGG	2 cut(s)	56, 372
SfaNI	GCATC	2 cut(s)	827, 1436
SfcI	CTRYAG	1 cut(s)	1131
SfuI	TTCGAA	1 cut(s)	1118
SinI	GGWCC	3 cut(s)	441, 650, 870
SmiMI	CAYNNNNRTG	1 cut(s)	1275
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
SsiI	CCGC	3 cut(s)	672, 880, 1080
SspI	AATATT	2 cut(s)	1201, 1242
SspMI	CTAG	3 cut(s)	227, 605, 1469
StyD4I	CCNGG	2 cut(s)	54, 370
StyI	CCWWGG	1 cut(s)	1052
TaaI	ACNGT	3 cut(s)	751, 1264, 1405
TaiI	ACGT	1 cut(s)	26
TaqI	TCGA	4 cut(s)	330, 504, 643, 1118
TatI	WGTACW	1 cut(s)	1435
TauI	GCSGC	1 cut(s)	1082
TfiI	GAWTC	4 cut(s)	341, 701, 725, 1205
Tru1I	TTAA	8 cut(s)	33, 512, 588, 623, 780, 959, 1106, 1421
Tru9I	TTAA	8 cut(s)	33, 512, 588, 623, 780, 959, 1106, 1421
TscAI	CASTG	3 cut(s)	693, 853, 1267
TseFI	GTSAC	1 cut(s)	1456
TseI	GCWGC	9 cut(s)	498, 613, 980, 1130, 1133, 1181, 1184, 1187, 1531
Tsp45I	GTSAC	1 cut(s)	1456
TspDTI	ATGAA	9 cut(s)	201, 420, 482, 666, 707, 749, 852, 1140, 1251
TspRI	CASTG	3 cut(s)	693, 853, 1267
VpaK11BI	GGWCC	3 cut(s)	441, 650, 870
VspI	ATTAAT	1 cut(s)	588
XapI	RAATTY	3 cut(s)	84, 119, 714
XbaI	TCTAGA	2 cut(s)	226, 604
XceI	RCATGY	3 cut(s)	105, 775, 1274
XcmI	CCANNNNNNNNNTGG	1 cut(s)	154
XmnI	GAANNNNTTC	1 cut(s)	729
XspI	CTAG	3 cut(s)	227, 605, 1469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.