No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g20750 FvH4_1g20750 FvH4_1g20750 FvH4_1g20790 FvH4_1g20810 FvH4_1g20831 |
| rosa_chinensis | RchiOBHm_Chr2g0113371 RchiOBHm_Chr2g0113421 |
| rosa_laevigata | RLG00000009257 RLG00000018062 |
| rosa_multiflora | Rmu_sc0007415.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00129270 Rroxscaffold_2G00129290 Rroxscaffold_2G00129300 Rroxscaffold_2G00129880 Rroxscaffold_2G00129890 Rroxscaffold_2G00129910 Rroxscaffold_5G00344540 |
| rosa_rugosa | Rorug02G0186600 Rorug02G0187300 Rorug05G0025000 |
| rosa_samantha | Rh2AG241300 Rh2AG241800 Rh2BG255500 Rh2CG245600 Rh2CG245900 Rh2DG249300 |
| rosa_wichuraiana | Rw2G018840 Rw2G018860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 179 |
| AccIII | TCCGGA | 2 cut(s) | 13, 171 |
| AciI | CCGC | 3 cut(s) | 136, 158, 179 |
| AclWI | GGATC | 3 cut(s) | 98, 111, 125 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 141, 142, 163, 178 |
| AflIII | ACRYGT | 1 cut(s) | 8 |
| AluBI | AGCT | 1 cut(s) | 223 |
| AluI | AGCT | 1 cut(s) | 223 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| AlwI | GGATC | 3 cut(s) | 98, 111, 125 |
| Aor13HI | TCCGGA | 2 cut(s) | 13, 171 |
| AoxI | GGCC | 1 cut(s) | 183 |
| AsuC2I | CCSGG | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| BamHI | GGATCC | 1 cut(s) | 103 |
| BceAI | ACGGC | 1 cut(s) | 208 |
| BciVI | GTATCC | 1 cut(s) | 10 |
| BcnI | CCSGG | 1 cut(s) | 101 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BfuI | GTATCC | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 1 cut(s) | 101 |
| BmiI | GGNNCC | 1 cut(s) | 105 |
| BmrFI | CCNGG | 1 cut(s) | 101 |
| BpuMI | CCSGG | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 2 cut(s) | 162, 186 |
| BsaWI | WCCGGW | 2 cut(s) | 13, 171 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 141, 142, 163, 178 |
| BseAI | TCCGGA | 2 cut(s) | 13, 171 |
| BseDI | CCNNGG | 2 cut(s) | 162, 186 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 141, 142, 163, 178 |
| Bsh1285I | CGRYCG | 1 cut(s) | 205 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BsiEI | CGRYCG | 1 cut(s) | 205 |
| BsiSI | CCGG | 3 cut(s) | 14, 100, 172 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 141, 142, 163, 178 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsmI | GAATGC | 1 cut(s) | 138 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bsp13I | TCCGGA | 2 cut(s) | 13, 171 |
| Bsp143I | GATC | 4 cut(s) | 103, 123, 130, 202 |
| BspACI | CCGC | 3 cut(s) | 136, 158, 179 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspEI | TCCGGA | 2 cut(s) | 13, 171 |
| BspLI | GGNNCC | 1 cut(s) | 105 |
| BspPI | GGATC | 3 cut(s) | 98, 111, 125 |
| BsrBI | CCGCTC | 1 cut(s) | 179 |
| BssECI | CCNNGG | 2 cut(s) | 162, 186 |
| BssMI | GATC | 4 cut(s) | 103, 123, 130, 202 |
| BstC8I | GCNNGC | 1 cut(s) | 221 |
| BstDSI | CCRYGG | 1 cut(s) | 162 |
| BstEII | GGTNACC | 1 cut(s) | 92 |
| BstKTI | GATC | 4 cut(s) | 106, 126, 133, 205 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 4 cut(s) | 103, 123, 130, 202 |
| BstMCI | CGRYCG | 1 cut(s) | 205 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 225 |
| BstNSI | RCATGY | 1 cut(s) | 12 |
| BstPI | GGTNACC | 1 cut(s) | 92 |
| BstSCI | CCNGG | 1 cut(s) | 99 |
| BstX2I | RGATCY | 1 cut(s) | 103 |
| BstYI | RGATCY | 1 cut(s) | 103 |
| BsuI | GTATCC | 1 cut(s) | 10 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| BtgI | CCRYGG | 1 cut(s) | 162 |
| Cac8I | GCNNGC | 1 cut(s) | 221 |
| CviAII | CATG | 2 cut(s) | 9, 64 |
| CviJI | RGCY | 5 cut(s) | 167, 185, 195, 219, 223 |
| CviKI_1 | RGCY | 5 cut(s) | 167, 185, 195, 219, 223 |
| DpnI | GATC | 4 cut(s) | 105, 125, 132, 204 |
| DpnII | GATC | 4 cut(s) | 103, 123, 130, 202 |
| Eco91I | GGTNACC | 1 cut(s) | 92 |
| EcoO65I | GGTNACC | 1 cut(s) | 92 |
| FaeI | CATG | 2 cut(s) | 12, 67 |
| FaiI | YATR | 5 cut(s) | 10, 65, 86, 216, 236 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 31, 63 |
| FatI | CATG | 2 cut(s) | 8, 63 |
| FauI | CCCGC | 2 cut(s) | 143, 165 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| HapII | CCGG | 3 cut(s) | 14, 100, 172 |
| Hin1II | CATG | 2 cut(s) | 12, 67 |
| HpaII | CCGG | 3 cut(s) | 14, 100, 172 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy188I | TCNGA | 1 cut(s) | 190 |
| Hpy188III | TCNNGA | 3 cut(s) | 14, 143, 172 |
| HpyAV | CCTTC | 1 cut(s) | 44 |
| HpyCH4V | TGCA | 1 cut(s) | 228 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 225 |
| Hsp92II | CATG | 2 cut(s) | 12, 67 |
| Kpn2I | TCCGGA | 2 cut(s) | 13, 171 |
| Kzo9I | GATC | 4 cut(s) | 103, 123, 130, 202 |
| LmnI | GCTCC | 1 cut(s) | 159 |
| LpnPI | CCDG | 4 cut(s) | 27, 113, 185, 233 |
| MaeIII | GTNAC | 2 cut(s) | 26, 92 |
| MalI | GATC | 4 cut(s) | 105, 125, 132, 204 |
| MbiI | CCGCTC | 1 cut(s) | 179 |
| MboI | GATC | 4 cut(s) | 103, 123, 130, 202 |
| MflI | RGATCY | 1 cut(s) | 103 |
| MnlI | CCTC | 3 cut(s) | 196, 209, 222 |
| MroI | TCCGGA | 2 cut(s) | 13, 171 |
| MspI | CCGG | 3 cut(s) | 14, 100, 172 |
| MspR9I | CCNGG | 1 cut(s) | 101 |
| Mva1269I | GAATGC | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 225 |
| NciI | CCSGG | 1 cut(s) | 101 |
| NdeII | GATC | 4 cut(s) | 103, 123, 130, 202 |
| NlaIII | CATG | 2 cut(s) | 12, 67 |
| NlaIV | GGNNCC | 1 cut(s) | 105 |
| NmuCI | GTSAC | 1 cut(s) | 92 |
| NspI | RCATGY | 1 cut(s) | 12 |
| PciI | ACATGT | 1 cut(s) | 8 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 198 |
| PctI | GAATGC | 1 cut(s) | 138 |
| Ple19I | CGATCG | 1 cut(s) | 205 |
| PscI | ACATGT | 1 cut(s) | 8 |
| PspEI | GGTNACC | 1 cut(s) | 92 |
| PspN4I | GGNNCC | 1 cut(s) | 105 |
| PsuI | RGATCY | 1 cut(s) | 103 |
| PvuI | CGATCG | 1 cut(s) | 205 |
| Sau3AI | GATC | 4 cut(s) | 103, 123, 130, 202 |
| ScrFI | CCNGG | 1 cut(s) | 101 |
| SetI | ASST | 2 cut(s) | 36, 225 |
| SsiI | CCGC | 3 cut(s) | 136, 158, 179 |
| StyD4I | CCNGG | 1 cut(s) | 99 |
| TaqI | TCGA | 2 cut(s) | 122, 201 |
| TseFI | GTSAC | 1 cut(s) | 92 |
| Tsp45I | GTSAC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 1 cut(s) | 101 |
| TspGWI | ACGGA | 1 cut(s) | 65 |
| XceI | RCATGY | 1 cut(s) | 12 |