Rorug05G0025000

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
1593092 .. 1602598
9507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0025000.1

Sequence Viewer

Length: 3726 bp
ATGGCTCTTTTAGAGATGAGAAATTTTATTGCCCGGATGTTGGTGAGGAGAGTGTTTTCACTAGCCGGACAAGAATTCCGTTTGCAATGGGGATTCGGTGGAGAATTAACAAAGCTGCGTGAAACAGTAGGCATGGTTGAAGCTTTGCTACGTGATGCCGACCATCCGCGACACAATCAGCAGCAGGGTGAGGCGGTGCAGCTGTGGGTGGCGAAGCTTGAAGAAATAGCTGATGATGCTGATAATCTGTTGGATGAGTGCAACTATGAAGAGCTCCGGGTTCAAGTAGAGTTGCCAACCCGAATCGGAAGAACTTTGAATTCCGTTTCACTCTCTAAGGCCCGATATCGTCGGAAAAAAGCACGAAAGATTCAGAAAATCAATAAATCTTTGAAGAATCTGTGTATAATGGCGCCTGGAATTGGGCTAGTGTCTACGCCATTGCCATCTGCAGCCCCTCGTAACCACCGGGAAACTTACTCCTTTGATAAAGATGAAGAGATTATCGTTGGCAGAGAGGAGGTAGTGTCCGATATAGTATCAAACTCGACCAGTAGTCAAGCAAATCACCTCTCCGTTTTGGCTATTGTGGGTATGGGAGGCCTCGGTAAGATAACCGTGGCGAAACTAGTATGCCATGATCCTAAGATAGAAGGGCACTTTGATGAAAAAATATGGATATGTGTATCTACTGATTTCCAAGTCGTGATGATATTAAGGAGGATCTTGCAGTCATTTCGACCTGGAGCTGCAGTAGAGGGCAAGGATGAACTTTGTAAAACCCTCAAACAAGAGCTGAAAGGGAAAAGATATCTTCTCATACTGGATGATGTTTGGTGCCAGGAATCTGAAAAATGGGAAGAGTTGATAAATTGCTTGTCGAATGTTAATGATAGGCTGGGGTCCAACATCATTGTCACTACCCGCAACGTGGGGGTTGCATCAACCATTGCATCAATCCTGCAAACATTTACTATGCTTGAGATGGATAAGCTATCAGACAACCAGTGTTGGCAGATATTGAAGAACAGAGCATTTCCAGATGGAGCTGCTAATCTAAATAGAGATCAAGAAATCCTTGGAAAGGAGATTGCTAGAAGGTGTGCAGGCTTACCACTAGTGGCAAAGGTTTTGGGATACACGATGCGCTCCAAAACAAGTGATGGGTGGAGGTCAATAGTAGAAAGTAGCATATGGAATTTGCCTGGAGGAGATACGAAAATCTTGTCAATTTTAAAGTTGAGTTTTAATGATCTGAAATCACCAGCTGTAAAACAGTGTTTTGCATTCTGCTCTAACTTTGTCAAAGATTTTGAATTTGAGAGGGAGGACTTAATTCGACTTTGGATGGCTCAAGGATGGCTACATCATTTTTCTACTGAGGAAAGTAATCTAGATATGGAAGATATAGAACATGTATCCAAATCTAGGTGGGACTCCAAGGAGACTGAAACAAAAAGAGGTTTGCGCTCATTTTTTGTTGAGAGGGATCAAGTCCTTTTTAACACCTTACCAAGCTTTGAAGCTTTGCGAGTTGTAAAATTATGCGGTGCAGATATTAAGGTGTTGCCTGATTCAGTTGGAAAAATGAAACACCTGAGGTATTTGGATATTTCCAATACAAAAGTTAGAACACTCCCCAAGTCTGTTGGCAAGCTTTATAACCTACAGACTTTGAGAATGAACTATCTCGAGTTGAGAGCGTGTCCAAAGGAACTGACCAATTTGATCAACTTGAGACATATTTCTTATGATCGCGTATTCGGTGGATGGTCTCCATGGCCATCTGGGATGGGGCGATTGACGAACCTTCAATCATTACCTGAGTTCCAGGTGCTTAAGAAGATAGGTTGCGGAATTGAGGAACTGGGCAGCTTGAAACAATTGAAAGGTAAATTGTCTATTTATTGTCTGGAATGTGTGACAGATATAGAAAAAGCTAAGAAAGCAAATCTAGTGGAGAAGTGTATACGTGATTTAAGCTTGAGTTGGTCTTGGTCGAGTACATCCAGGCCGAACTGCAATGATGAGGATGTACTGGAAGCACTTCAACCACACCCTAATTTGGAATTCTTAAAGATTGAAAACTTCTTGGGTGATAAGTTTCCTTCATGGATGATGAGTAAGTTGTCTCTACCCTCAAATTTGAAAGAGATTAAATTTCAGGGTTGCAAAGAATGCAAAGAAGTCCCAAAGCTTGGCCATCTGCCGACTCTTAGATCTCTTTACATTGAAATGCCAAACCTGGAACGTCTAGGATCTGATTTTTACGGTTATGATCCCCATGAGGCTACGACAGGTTGTCAGACGAAGGCTTTGTTTCCTGCATTGAAAAGTTTGACTATTCAATACGCCGGGAAGCTAATTGAATGGAGTGAACCACAAGTATTGTTGCCAACAGTGGTGTTTCAATCTCTTGAGAAGCTTAATTTGCAGGGTTCTCCCCAATTAAGAAGTGCTCCCAGTTATTTTCCATCTCTTCAGTCGCTGAGTCTGGTGAAAATAGATAGCGGTGTGCCAGTAACAAGTGTTCTAAGCAAACTGACAACTCTCACTTATCTCCATATATCAGGTGTGAAGGGACTTGACTGCCTGCCTGAAGGGATGTTAAGGAACAACAAGAATCTTGCACGTTTAAAGATAGATCGTTGTGAGGAGTTAACTTGTATTGCTCCCCATGGATTTGGTTGTTGTGCTTCTCTTCAGTCACTGGTGATTGTTGGGTGTAATAAACTGAGGTATTTATCTGAGGGGCTACTTGCACCCTCATTAGAGGAGTTGCTTATATCCGACTGCCCCAGTCTGGAGTCCATCCCATTTACAGAGGGGATTGAATACGGCAGTCTTCAAACCTTGCGAATAAAGAAATGCTCTACCCTAACATCCATCCCAAGTTTACAGGGCTTCTCATCCCTTCGTGCAATAAAGATTTCGGAATGTTCTGAACTATTGAGCCTCCCGAGTGGTCTAAACTGCTGTACCTCTCTTGGAAAAATAAAAATACGTAGCTGCAATAAGCTAAAGTTCATTTCAATTGACAGTCTCCCATCCCTCGTCCGGTTGGACATAAGGACATGTAGTAGTCTAGAGTCTATTGATGCTTTACATGGCTTCATATGTCTGTATGAATTCACAATCCGAGATTGTGATAAATTGACAAGTCTGCTTGGATCTTTTCCCATTCTTCAGTGCCTGGAGATAAGAAACTGCCCCAGTCTGGAGACAATTCCATGTTCAGACAACCTCACAACCCTCAGCAGCTTGAAAATTTATAGTTGTGATGGATTAATAAACAAACTCAGCGAGTTAGCATCCCTCACCAGCTTGAGAAGATTGGAAGTTGGTGATTTCTGCAAGGAGCTCGATTCATTCCCTGTCATACCACAACTTCAGACACTGATGCTATCTGGGTGGCCTAAGCTCAAGCAGCAAGGTGACGAAATTATAGTTGCAGTTCCCGACTTCCTGGTATTGGTAACATCTTGTATATTTACAAGGAGGCTTTCACTCAACTGTTCTACAAGAGATGCAAAACAGTTTCCTGGTGACGGGGCAAAATTAAAGGCCTGTAGGGATCTTGGAGCTGAATTATGCATTAATCATAACACAGAAGACTTTGCTGAATTGGTAATGCAGAAGACAGAAGGAAGAGGTTTGTTCTCTTGTATTATCACTCCATTGATAACCTCAAGAATGAGTACTGTAACTTTCAATGTTAAATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1241

Amino Acids

139.22

Weight (kDa)

8.27

Isoelectric Point (pI)

49.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 13 - 100 3e-17 Rx N-terminal domain
NB-ARC PF00931 188 - 347 3.6e-32 NB-ARC domain
LRR_14 PF23598 489 - 810 4.4e-32 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 620 - 745 8.2e-34 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1662
AccB1I GGYRCC 2 cut(s) 412, 837
AccB7I CCANNNNNTGG 1 cut(s) 2198
AccI GTMKAC 2 cut(s) 434, 1969
AccII CGCG 2 cut(s) 169, 1758
AciI CCGC 6 cut(s) 167, 194, 925, 1548, 1854, 2511
AclWI GGATC 7 cut(s) 635, 731, 1497, 2266, 2273, 3178, 3582
AcoI YGGCCR 2 cut(s) 1781, 2200
AcuI CTGAAG 5 cut(s) 2465, 2619, 2687, 3170, 3374
AcyI GRCGYC 1 cut(s) 413
AfaI GTAC 4 cut(s) 2005, 2037, 2980, 3700
AflII CTTAAG 1 cut(s) 1838
AflIII ACRYGT 2 cut(s) 1414, 3074
AhdI GACNNNNNGTC 2 cut(s) 555, 2301
AhlI ACTAGT 2 cut(s) 628, 1117
Alw21I GWGCWC 3 cut(s) 276, 2461, 3363
Alw26I GTCTC 6 cut(s) 1439, 1732, 1779, 2136, 3047, 3215
AlwI GGATC 7 cut(s) 635, 731, 1497, 2266, 2273, 3178, 3582
AlwNI CAGNNNCTG 4 cut(s) 2488, 2710, 3193, 3397
Ama87I CYCGRG 2 cut(s) 1691, 2959
AoxI GGCC 7 cut(s) 339, 601, 1781, 2012, 2200, 3413, 3564
ArsI GACNNNNNNTTYG 4 cut(s) 1211, 1243, 2299, 2331
AseI ATTAAT 2 cut(s) 3287, 3597
Asp700I GAANNNNTTC 1 cut(s) 2046
AspLEI GCGC 3 cut(s) 415, 1149, 1470
AspS9I GGNCC 2 cut(s) 340, 903
AsuC2I CCSGG 4 cut(s) 34, 278, 470, 2356
AvaI CYCGRG 2 cut(s) 1691, 2959
AvaII GGWCC 1 cut(s) 903
AxyI CCTNAGG 1 cut(s) 1598
BaeGI GKGCMC 1 cut(s) 660
BaeI ACNNNNGTAYC 2 cut(s) 2962, 2995
BalI TGGCCA 2 cut(s) 1783, 2202
BanI GGYRCC 2 cut(s) 412, 837
BanII GRGCYC 2 cut(s) 276, 3363
BarI GAAGNNNNNNTAC 2 cut(s) 132, 164
BbsI GAAGAC 3 cut(s) 2837, 3618, 3644
Bbv12I GWGCWC 3 cut(s) 276, 2461, 3363
BbvCI CCTCAGC 1 cut(s) 3254
BceAI ACGGC 1 cut(s) 2854
BcgI CGANNNNNNTGC 4 cut(s) 719, 753, 3343, 3377
BciVI GTATCC 2 cut(s) 1130, 1429
BclI TGATCA 1 cut(s) 1728
BcnI CCSGG 4 cut(s) 34, 278, 470, 2356
BcoDI GTCTC 6 cut(s) 1439, 1732, 1779, 2136, 3047, 3215
BcuI ACTAGT 2 cut(s) 628, 1117
BfmI CTRYAG 4 cut(s) 450, 750, 1667, 3568
BfoI RGCGCY 1 cut(s) 416
BfrI CTTAAG 1 cut(s) 1838
BfuI GTATCC 2 cut(s) 1130, 1429
BglII AGATCT 1 cut(s) 2219
BmcAI AGTACT 1 cut(s) 3700
Bme18I GGWCC 1 cut(s) 903
BmeRI GACNNNNNGTC 2 cut(s) 555, 2301
BmeT110I CYCGRG 2 cut(s) 1691, 2959
BmgT120I GGNCC 2 cut(s) 340, 903
BmiI GGNNCC 3 cut(s) 414, 839, 904
BmrI ACTGGG 4 cut(s) 1877, 2457, 2793, 3207
BmsI GCATC 9 cut(s) 145, 226, 950, 962, 1134, 3088, 3320, 3390, 3517
BmuI ACTGGG 4 cut(s) 1877, 2457, 2793, 3207
BpiI GAAGAC 3 cut(s) 2837, 3618, 3644
BpmI CTGGAG 5 cut(s) 765, 1227, 2825, 3215, 3239
Bpu10I CCTNAGC 2 cut(s) 3254, 3417
BpuEI CTTGAG 8 cut(s) 1001, 1338, 1756, 2005, 2438, 3346, 3407, 3673
BpuMI CCSGG 4 cut(s) 34, 278, 470, 2356
BsaAI YACGTR 3 cut(s) 152, 1973, 3005
BsaHI GRCGYC 1 cut(s) 413
BsaI GGTCTC 1 cut(s) 1779
BsaJI CCNNGG 6 cut(s) 604, 618, 1078, 1440, 1778, 2677
BsaWI WCCGGW 1 cut(s) 3057
BsaXI ACNNNNNCTCC 4 cut(s) 512, 542, 738, 768
Bse21I CCTNAGG 1 cut(s) 1598
Bse3DI GCAATG 4 cut(s) 92, 440, 948, 2029
BseDI CCNNGG 6 cut(s) 604, 618, 1078, 1440, 1778, 2677
BseMI GCAATG 4 cut(s) 92, 440, 948, 2029
BseMII CTCAG 8 cut(s) 1371, 1589, 1815, 2480, 2726, 2739, 3268, 3313
BseRI GAGGAG 5 cut(s) 61, 533, 1224, 2669, 2789
BseSI GKGCMC 1 cut(s) 660
BseYI CCCAGC 1 cut(s) 898
BsgI GTGCAG 3 cut(s) 218, 1125, 1572
Bsh1236I CGCG 2 cut(s) 169, 1758
BshFI GGCC 7 cut(s) 341, 603, 1783, 2014, 2202, 3415, 3566
BshNI GGYRCC 2 cut(s) 412, 837
BsiHKAI GWGCWC 3 cut(s) 276, 2461, 3363
BsiHKCI CYCGRG 2 cut(s) 1691, 2959
BsiSI CCGG 6 cut(s) 34, 66, 277, 469, 2355, 3058
BslFI GGGAC 3 cut(s) 1448, 2174, 2595
BsmAI GTCTC 6 cut(s) 1439, 1732, 1779, 2136, 3047, 3215
BsmFI GGGAC 3 cut(s) 1448, 2174, 2595
BsmI GAATGC 2 cut(s) 1286, 2183
BsnI GGCC 7 cut(s) 341, 603, 1783, 2014, 2202, 3415, 3566
Bso31I GGTCTC 1 cut(s) 1779
BsoBI CYCGRG 2 cut(s) 1691, 2959
Bsp1286I GDGCHC 4 cut(s) 276, 660, 2461, 3363
Bsp19I CCATGG 2 cut(s) 1778, 2677
BspACI CCGC 6 cut(s) 167, 194, 925, 1548, 1854, 2511
BspANI GGCC 7 cut(s) 341, 603, 1783, 2014, 2202, 3415, 3566
BspCNI CTCAG 8 cut(s) 1372, 1590, 1816, 2481, 2727, 2740, 3267, 3312
BspFNI CGCG 2 cut(s) 169, 1758
BspLI GGNNCC 3 cut(s) 414, 839, 904
BspMAI CTGCAG 2 cut(s) 454, 754
BspPI GGATC 7 cut(s) 635, 731, 1497, 2266, 2273, 3178, 3582
BspQI GCTCTTC 1 cut(s) 264
BspT107I GGYRCC 2 cut(s) 412, 837
BspTI CTTAAG 1 cut(s) 1838
BspTNI GGTCTC 1 cut(s) 1779
BsrDI GCAATG 4 cut(s) 92, 440, 948, 2029
BssECI CCNNGG 6 cut(s) 604, 618, 1078, 1440, 1778, 2677
BssNAI GTATAC 1 cut(s) 1970
BssNI GRCGYC 1 cut(s) 413
BssT1I CCWWGG 4 cut(s) 1078, 1440, 1778, 2677
Bst1107I GTATAC 1 cut(s) 1970
Bst4CI ACNGT 9 cut(s) 127, 619, 1278, 2273, 2401, 3041, 3515, 3537, 3703
Bst6I CTCTTC 6 cut(s) 264, 492, 855, 2484, 2706, 3643
BstACI GRCGYC 1 cut(s) 413
BstAFI CTTAAG 1 cut(s) 1838
BstAPI GCANNNNNTGC 1 cut(s) 2178
BstBAI YACGTR 3 cut(s) 152, 1973, 3005
BstC8I GCNNGC 3 cut(s) 1108, 1655, 2594
BstDSI CCRYGG 3 cut(s) 618, 1778, 2677
BstENI CCTNNNNNAGG 1 cut(s) 1082
BstFNI CGCG 2 cut(s) 169, 1758
BstH2I RGCGCY 1 cut(s) 416
BstHHI GCGC 3 cut(s) 415, 1149, 1470
BstMAI GTCTC 6 cut(s) 1439, 1732, 1779, 2136, 3047, 3215
BstMWI GCNNNNNNNGC 5 cut(s) 236, 1946, 2178, 2431, 3427
BstNSI RCATGY 2 cut(s) 1418, 3078
BstSFI CTRYAG 4 cut(s) 450, 750, 1667, 3568
BstSLI GKGCMC 1 cut(s) 660
BstSNI TACGTA 1 cut(s) 3005
BstUI CGCG 2 cut(s) 169, 1758
BstV2I GAAGAC 3 cut(s) 2837, 3618, 3644
BstX2I RGATCY 5 cut(s) 723, 2219, 2258, 3170, 3574
BstXI CCANNNNNNTGG 1 cut(s) 2684
BstYI RGATCY 5 cut(s) 723, 2219, 2258, 3170, 3574
BstZ17I GTATAC 1 cut(s) 1970
Bsu36I CCTNAGG 1 cut(s) 1598
BsuI GTATCC 2 cut(s) 1130, 1429
BsuRI GGCC 7 cut(s) 341, 603, 1783, 2014, 2202, 3415, 3566
BtgI CCRYGG 3 cut(s) 618, 1778, 2677
BtsIMutI CAGTG 6 cut(s) 1013, 1283, 2406, 2708, 3194, 3395
Cac8I GCNNGC 3 cut(s) 1108, 1655, 2594
CaiI CAGNNNCTG 4 cut(s) 2488, 2710, 3193, 3397
CfoI GCGC 3 cut(s) 415, 1149, 1470
Cfr13I GGNCC 2 cut(s) 340, 903
Csp6I GTAC 4 cut(s) 2004, 2036, 2979, 3699
CspCI CAANNNNNGTGG 4 cut(s) 1938, 1973, 2370, 2405
CviQI GTAC 4 cut(s) 2004, 2036, 2979, 3699
DinI GGCGCC 1 cut(s) 414
DraI TTTAAA 2 cut(s) 1236, 2637
DriI GACNNNNNGTC 2 cut(s) 555, 2301
EaeI YGGCCR 2 cut(s) 1781, 2200
Eam1104I CTCTTC 6 cut(s) 264, 492, 855, 2484, 2706, 3643
Eam1105I GACNNNNNGTC 2 cut(s) 555, 2301
EarI CTCTTC 6 cut(s) 264, 492, 855, 2484, 2706, 3643
Ecl136II GAGCTC 2 cut(s) 274, 3361
Eco105I TACGTA 1 cut(s) 3005
Eco130I CCWWGG 4 cut(s) 1078, 1440, 1778, 2677
Eco147I AGGCCT 2 cut(s) 603, 3566
Eco24I GRGCYC 2 cut(s) 276, 3363
Eco31I GGTCTC 1 cut(s) 1779
Eco32I GATATC 2 cut(s) 347, 812
Eco47I GGWCC 1 cut(s) 903
Eco53kI GAGCTC 2 cut(s) 274, 3361
Eco57I CTGAAG 5 cut(s) 2465, 2619, 2687, 3170, 3374
Eco81I CCTNAGG 1 cut(s) 1598
Eco88I CYCGRG 2 cut(s) 1691, 2959
EcoICRI GAGCTC 2 cut(s) 274, 3361
EcoNI CCTNNNNNAGG 1 cut(s) 1082
EcoRI GAATTC 4 cut(s) 74, 319, 2069, 3128
EcoRV GATATC 2 cut(s) 347, 812
EcoT14I CCWWGG 4 cut(s) 1078, 1440, 1778, 2677
EcoT22I ATGCAT 1 cut(s) 3596
EcoT38I GRGCYC 2 cut(s) 276, 3363
EgeI GGCGCC 1 cut(s) 414
EheI GGCGCC 1 cut(s) 414
ErhI CCWWGG 4 cut(s) 1078, 1440, 1778, 2677
FalI AAGNNNNNCTT 2 cut(s) 1062, 1094
FaqI GGGAC 3 cut(s) 1448, 2174, 2595
FauI CCCGC 1 cut(s) 932
FauNDI CATATG 2 cut(s) 1193, 3116
FbaI TGATCA 1 cut(s) 1728
FblI GTMKAC 2 cut(s) 434, 1969
FriOI GRGCYC 2 cut(s) 276, 3363
GlaI GCGC 3 cut(s) 414, 1148, 1469
GsaI CCCAGC 1 cut(s) 902
GsuI CTGGAG 5 cut(s) 765, 1227, 2825, 3215, 3239
HaeII RGCGCY 1 cut(s) 416
HaeIII GGCC 7 cut(s) 341, 603, 1783, 2014, 2202, 3415, 3566
HapII CCGG 6 cut(s) 34, 66, 277, 469, 2355, 3058
HhaI GCGC 3 cut(s) 415, 1149, 1470
Hin1I GRCGYC 1 cut(s) 413
Hin6I GCGC 3 cut(s) 413, 1147, 1468
HinP1I GCGC 3 cut(s) 413, 1147, 1468
HincII GTYRAC 1 cut(s) 2661
HindII GTYRAC 1 cut(s) 2661
HindIII AAGCTT 8 cut(s) 141, 215, 1516, 1524, 1655, 1981, 2195, 2423
HpaI GTTAAC 1 cut(s) 2661
HpaII CCGG 6 cut(s) 34, 66, 277, 469, 2355, 3058
Hpy166II GTNNAC 5 cut(s) 435, 1970, 2378, 2661, 2897
Hpy8I GTNNAC 5 cut(s) 435, 1970, 2378, 2661, 2897
Hpy99I CGWCG 1 cut(s) 354
HpyAV CCTTC 9 cut(s) 647, 1092, 1820, 2118, 2305, 2572, 2594, 2924, 3638
HpyCH4III ACNGT 9 cut(s) 127, 619, 1278, 2273, 2401, 3041, 3515, 3537, 3703
HpyCH4IV ACGT 6 cut(s) 151, 930, 1972, 2251, 2632, 3004
HpyF10VI GCNNNNNNNGC 5 cut(s) 236, 1946, 2178, 2431, 3427
HpySE526I ACGT 6 cut(s) 151, 930, 1972, 2251, 2632, 3004
Hsp92I GRCGYC 1 cut(s) 413
HspAI GCGC 3 cut(s) 413, 1147, 1468
KasI GGCGCC 1 cut(s) 412
Ksp22I TGATCA 1 cut(s) 1728
KspAI GTTAAC 1 cut(s) 2661
LguI GCTCTTC 1 cut(s) 264
LmnI GCTCC 8 cut(s) 279, 746, 1046, 1154, 2464, 2677, 3358, 3581
LweI GCATC 9 cut(s) 145, 226, 950, 962, 1134, 3088, 3320, 3390, 3517
MaeII ACGT 6 cut(s) 151, 930, 1972, 2251, 2632, 3004
MaeIII GTNAC 9 cut(s) 461, 916, 1921, 2521, 2706, 3434, 3475, 3545, 3703
MfeI CAATTG 2 cut(s) 1883, 3033
MflI RGATCY 5 cut(s) 723, 2219, 2258, 3170, 3574
MhlI GDGCHC 4 cut(s) 276, 660, 2461, 3363
MlsI TGGCCA 2 cut(s) 1783, 2202
MluNI TGGCCA 2 cut(s) 1783, 2202
Mly113I GGCGCC 1 cut(s) 413
MlyI GAGTC 5 cut(s) 1430, 2206, 2500, 2816, 3098
MmeI TCCRAC 6 cut(s) 231, 332, 930, 1561, 2814, 3042
Mox20I TGGCCA 2 cut(s) 1783, 2202
Mph1103I ATGCAT 1 cut(s) 3596
MroXI GAANNNNTTC 1 cut(s) 2046
MscI TGGCCA 2 cut(s) 1783, 2202
MslI CAYNNNNRTG 2 cut(s) 663, 2234
Msp20I TGGCCA 2 cut(s) 1783, 2202
MspA1I CMGCKG 2 cut(s) 202, 1268
MspCI CTTAAG 1 cut(s) 1838
MspI CCGG 6 cut(s) 34, 66, 277, 469, 2355, 3058
MunI CAATTG 2 cut(s) 1883, 3033
Mva1269I GAATGC 2 cut(s) 1286, 2183
MvnI CGCG 2 cut(s) 169, 1758
MwoI GCNNNNNNNGC 5 cut(s) 236, 1946, 2178, 2431, 3427
NarI GGCGCC 1 cut(s) 413
NciI CCSGG 4 cut(s) 34, 278, 470, 2356
NcoI CCATGG 2 cut(s) 1778, 2677
NdeI CATATG 2 cut(s) 1193, 3116
NlaIV GGNNCC 3 cut(s) 414, 839, 904
NmuCI GTSAC 5 cut(s) 916, 1921, 2706, 3434, 3545
NsiI ATGCAT 1 cut(s) 3596
NspI RCATGY 2 cut(s) 1418, 3078
PaeR7I CTCGAG 1 cut(s) 1691
PceI AGGCCT 2 cut(s) 603, 3566
PciI ACATGT 2 cut(s) 1414, 3074
PciSI GCTCTTC 1 cut(s) 264
PctI GAATGC 2 cut(s) 1286, 2183
PdmI GAANNNNTTC 1 cut(s) 2046
PfeI GAWTC 8 cut(s) 93, 303, 370, 397, 845, 1574, 2623, 3365
PflMI CCANNNNNTGG 1 cut(s) 2198
PleI GAGTC 5 cut(s) 1430, 2206, 2499, 2815, 3097
PluTI GGCGCC 1 cut(s) 416
PpsI GAGTC 5 cut(s) 1430, 2206, 2499, 2815, 3097
Ppu21I YACGTR 3 cut(s) 152, 1973, 3005
PscI ACATGT 2 cut(s) 1414, 3074
PshBI ATTAAT 2 cut(s) 3287, 3597
PsiI TTATAA 1 cut(s) 1662
Psp124BI GAGCTC 2 cut(s) 276, 3363
PspFI CCCAGC 1 cut(s) 898
PspN4I GGNNCC 3 cut(s) 414, 839, 904
PspPI GGNCC 2 cut(s) 340, 903
PsrI GAACNNNNNNTAC 2 cut(s) 2514, 2546
PstI CTGCAG 2 cut(s) 454, 754
PstNI CAGNNNCTG 4 cut(s) 2488, 2710, 3193, 3397
PsuI RGATCY 5 cut(s) 723, 2219, 2258, 3170, 3574
PvuII CAGCTG 2 cut(s) 202, 1268
RsaI GTAC 4 cut(s) 2005, 2037, 2980, 3700
RsaNI GTAC 4 cut(s) 2004, 2036, 2979, 3699
RseI CAYNNNNRTG 2 cut(s) 663, 2234
SacI GAGCTC 2 cut(s) 276, 3363
SapI GCTCTTC 1 cut(s) 264
Sau96I GGNCC 2 cut(s) 340, 903
ScaI AGTACT 1 cut(s) 3700
SchI GAGTC 5 cut(s) 1430, 2206, 2500, 2816, 3098
SduI GDGCHC 4 cut(s) 276, 660, 2461, 3363
SfaNI GCATC 9 cut(s) 145, 226, 950, 962, 1134, 3088, 3320, 3390, 3517
SfcI CTRYAG 4 cut(s) 450, 750, 1667, 3568
SfoI GGCGCC 1 cut(s) 414
Sfr274I CTCGAG 1 cut(s) 1691
SinI GGWCC 1 cut(s) 903
SlaI CTCGAG 1 cut(s) 1691
SmiMI CAYNNNNRTG 2 cut(s) 663, 2234
SnaBI TACGTA 1 cut(s) 3005
SpeI ACTAGT 2 cut(s) 628, 1117
SseBI AGGCCT 2 cut(s) 603, 3566
SsiI CCGC 6 cut(s) 167, 194, 925, 1548, 1854, 2511
SspDI GGCGCC 1 cut(s) 412
SstI GAGCTC 2 cut(s) 276, 3363
StuI AGGCCT 2 cut(s) 603, 3566
StyI CCWWGG 4 cut(s) 1078, 1440, 1778, 2677
TaaI ACNGT 9 cut(s) 127, 619, 1278, 2273, 2401, 3041, 3515, 3537, 3703
TaiI ACGT 6 cut(s) 154, 933, 1975, 2254, 2635, 3007
TaqI TCGA 7 cut(s) 548, 739, 881, 1339, 1692, 2000, 3363
TatI WGTACW 3 cut(s) 2003, 2035, 3698
TfiI GAWTC 8 cut(s) 93, 303, 370, 397, 845, 1574, 2623, 3365
TscAI CASTG 6 cut(s) 1013, 1283, 2406, 2715, 3194, 3402
TseFI GTSAC 5 cut(s) 916, 1921, 2706, 3434, 3545
Tsp45I GTSAC 5 cut(s) 916, 1921, 2706, 3434, 3545
TspGWI ACGGA 3 cut(s) 68, 313, 565
TspRI CASTG 6 cut(s) 1013, 1283, 2406, 2715, 3194, 3402
Van91I CCANNNNNTGG 1 cut(s) 2198
Vha464I CTTAAG 1 cut(s) 1838
VpaK11BI GGWCC 1 cut(s) 903
VspI ATTAAT 2 cut(s) 3287, 3597
XagI CCTNNNNNAGG 1 cut(s) 1082
XbaI TCTAGA 2 cut(s) 1393, 3085
XceI RCATGY 2 cut(s) 1418, 3078
XhoI CTCGAG 1 cut(s) 1691
XmiI GTMKAC 2 cut(s) 434, 1969
XmnI GAANNNNTTC 1 cut(s) 2046
ZrmI AGTACT 1 cut(s) 3700
Zsp2I ATGCAT 1 cut(s) 3596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.