Rorug02G0186600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0005517
Physical Location & Seq
Reverse (-)
17377462 .. 17380634
3173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0186600.1

Sequence Viewer

Length: 2157 bp
ATGGAGATCTTTACCATGTACCTTAATTCTTGCAGAAAGCATGAGGTAGAGCCCAATTCAGCAGTTCTCTCATGGTTTACTCAGGCCAAAGTTCAAAGTTCTCAGAATGAGAAGTGTAGCATAACAATTTCATTAGACCAGCTAAAGGATGCTGACATTTTGCCACTAAAGGACGTGCTTATGTCAAGTGACTCATCTCATATTCATGCAGTTGACTTATTTCTGGAATTCCATAGTGACCTGGGCACAGAAAGTGTTGTGGATTTGATGAATGGACTCAATGCAAAGCTTCGAGTTGTCGATCTCCAGGATTTGTCTTTGGGGAAAGAATTTCTGCGGGATCTTTGTCAGGGTTCCTTGGCTTGCCAAGTCTTCAACTTGCGGTCCATTCATATCCAGAAACTCGACATGATTGGAAACTTTTTGCGACTACACACCCTTAATCTTGATTTTTGTACTTCACTCGGTAGTTTGCGAAGGGACTGTTTTTCTTGCATGCCAAATCTGACGCGCCTCTCAATGTGTGAGACAAGAATTTCCAATCTCCTGACCACGACTGGTGCTCTGTCAAGACTTCCTTGTTTGCTAGAACTACGGTTCCAAAGCTGTTTATGTTGCAAGGAAACTGGATCATGTCCTGGTTTAGAAGGGCAACAGAAATTGCAGACTGAGACTCAAGAAAAAGATGAAACCCTTGTAAGTGAGGGTAAAAAAGCCTCGAGGAATGTGAGTATTACATTGAAGAACTTTGTAACTCATCATCCTTCACCCATATGCTTTGAGAAACATTATCGGGAGTATATCATATCTTCGCTGCCTGGTCTGGAAGTTTTAGATAATTTTCCTATTAGAATGACGGAGAGGGAATTGGCCAAGATGACGTCTGCAAAGTACTATGAATACTTACCTTATAAGAGACGGCACAAAGAAAGTGTTGTTAGTGTTTTGAATAAGCGTGAAATGGGAACTAGTGGTGTACACTTCCAGAAACCATTCAAGCCAAAACAATTATATCCTCATCGAAATGGTCAGAATTTTTTCTTGAGGTCTCTGTGTGCTGCCAAACTTGGGTCTTCAACTTGGCCACTGTTACATCCACTTTCCAATTTCAACCACACATGTAAAGCAGAAAACAAGAAGCTTCGTCCAAGGCAGTTTGAGTATCATCCATCAAACCCAAGTCTTATGGTTTTCGGAACTCTGGATGGTGAAGTAGTGGTTACTAACCATGAAAACGGGAAGATGGTTGGTTATATTCCATGCATAGGAGCAATGAGTAGTGTCTTGGGGCTTTGTTGGCTCAACAAGTCTCCGTCCAAGCTTGTTGCTGGTTCAGATAAGGGCTCCTTGAAGTTACTCGACATCAACAACATGTCACCAGAAGTTGCAGACTCTTGTTGCAGCTCTAGTGGTGCAACTTTTGAAGATTTCGAGCAATTGACTTCTCTTCATGTAAATTCAACTGATGACCAGCTTCTTGCTAGTGGATACTCCAAAGGCCTTGCTCTGTATGACGTTGGCAGTGGAAAACGTTTAGAGTTGTTCAGTAATCTTCACCGAGAACCGATCAATGTTGCCAAATTTGCACACCATTCCCCTTATATGTTTGCTACTTCATCCTTTGACCATGATGTGAAGATGTGGGATTTGAGACAGAGCCCAAGGAAACCGTGCTATACAGCTTCTAGCTCGAGAGGAAATGTGATGGCTTGCTTTTCTCCTGATGACCATTATTTGCTTGTTTCAGCTGTTGACAACGAGGTTAAGCAACTTTTGGCGGCAGATGGGAGGCTGCACATGAGTTTTGAGATAGCTTCAACAGGAAGTCCTCATAACTATACGCGGTCGTACTACATGAATGGAAGGGACTACATCATCAGTGGAAGTTGCGATGAGGACGTGATTCGCATCTGCTGTGCTCAAACTGGAAAGCGACTTAGGGATGTTTATTTGGAGGATGAATCAGGAAATTCAATATTCGTGCAGTCCTTAAGGGGCGATCCTTTCAGGCATTTTAACATGAGTATATTAGCCACTGCTACACGCCCAAGCTTCAAGTGGGAGATTATCAAGGTCAACTTACTTGCATCGAGTGACTCTGCAGAAGAACATTGTTATGGCCAGTGTTTGCAGCCTTCTTGCTGTCTGGGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

718

Amino Acids

80.58

Weight (kDa)

7.09

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHU1_N PF20919 6 - 209 3.8e-48 DWD hypersensitive to UV-B 1, N-terminal
DHU1_N PF20919 239 - 293 3.5e-09 DWD hypersensitive to UV-B 1, N-terminal
WD40_Prp19 PF24814 386 - 589 3.9e-10 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 399 - 635 3.2e-15 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 399 - 589 3.4e-09 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 400 - 591 3.4e-08 WDR36/Utp21 first beta-propeller
Beta-prop_THOC3 PF25174 480 - 647 2.2e-10 THOC3 beta-propeller domain
WDR55 PF24796 486 - 591 5.5e-06 WDR55
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 912
AatII GACGTC 1 cut(s) 884
AbsI CCTCGAGG 1 cut(s) 718
AccII CGCG 2 cut(s) 511, 1843
AciI CCGC 4 cut(s) 337, 382, 1778, 1843
AclI AACGTT 1 cut(s) 1531
AclWI GGATC 3 cut(s) 348, 637, 1994
AcoI YGGCCR 3 cut(s) 870, 1082, 2119
AcsI RAATTY 7 cut(s) 227, 329, 534, 1033, 1456, 1580, 1969
AcyI GRCGYC 1 cut(s) 881
AfaI GTAC 5 cut(s) 20, 457, 893, 978, 1850
AfiI CCNNNNNNNGG 3 cut(s) 145, 1068, 1265
AflII CTTAAG 1 cut(s) 1990
AflIII ACRYGT 2 cut(s) 1118, 1371
AhlI ACTAGT 1 cut(s) 968
AjiI CACGTC 2 cut(s) 175, 1900
AjnI CCWGG 4 cut(s) 240, 306, 637, 817
AloI GAACNNNNNNTCC 2 cut(s) 582, 614
Alw21I GWGCWC 2 cut(s) 565, 1921
Alw26I GTCTC 6 cut(s) 521, 665, 910, 1053, 1314, 1645
AlwI GGATC 3 cut(s) 348, 637, 1994
Ama87I CYCGRG 2 cut(s) 718, 1690
AoxI GGCC 5 cut(s) 84, 870, 1082, 1498, 2119
ApeKI GCWGC 5 cut(s) 814, 1058, 1401, 1792, 2131
ApoI RAATTY 7 cut(s) 227, 329, 534, 1033, 1456, 1580, 1969
Asp700I GAANNNNTTC 2 cut(s) 992, 1037
AspLEI GCGC 1 cut(s) 513
AspS9I GGNCC 1 cut(s) 384
AsuHPI GGTGA 4 cut(s) 759, 1220, 1368, 1547
AvaI CYCGRG 2 cut(s) 718, 1690
AvaII GGWCC 1 cut(s) 384
BaeGI GKGCMC 1 cut(s) 248
BalI TGGCCA 3 cut(s) 872, 1084, 2121
BanII GRGCYC 3 cut(s) 54, 1346, 1661
BbsI GAAGAC 2 cut(s) 364, 1065
Bbv12I GWGCWC 2 cut(s) 565, 1921
BbvI GCAGC 5 cut(s) 801, 1045, 1413, 1779, 2143
BccI CCATC 5 cut(s) 1177, 1199, 1237, 1699, 1778
BceAI ACGGC 1 cut(s) 935
BciT130I CCWGG 4 cut(s) 242, 308, 639, 819
BciVI GTATCC 1 cut(s) 1481
BcoDI GTCTC 6 cut(s) 521, 665, 910, 1053, 1314, 1645
BcuI ACTAGT 1 cut(s) 968
BfaI CTAG 5 cut(s) 587, 969, 1407, 1482, 1686
BfmI CTRYAG 1 cut(s) 2100
BfrI CTTAAG 1 cut(s) 1990
BfuI GTATCC 1 cut(s) 1481
BglII AGATCT 1 cut(s) 6
BisI GCNGC 6 cut(s) 815, 1059, 1402, 1779, 1793, 2132
BlsI GCNGC 6 cut(s) 816, 1060, 1403, 1780, 1794, 2133
BmcAI AGTACT 1 cut(s) 893
Bme1390I CCNGG 4 cut(s) 242, 308, 639, 819
Bme18I GGWCC 1 cut(s) 384
BmeT110I CYCGRG 2 cut(s) 718, 1690
BmgBI CACGTC 2 cut(s) 175, 1900
BmgT120I GGNCC 1 cut(s) 384
BmiI GGNNCC 3 cut(s) 355, 599, 1345
BmrFI CCNGG 4 cut(s) 242, 308, 639, 819
BmsI GCATC 3 cut(s) 139, 1917, 2096
BpiI GAAGAC 2 cut(s) 364, 1065
BpmI CTGGAG 1 cut(s) 290
BpuEI CTTGAG 2 cut(s) 660, 1063
BsaBI GATNNNNATC 1 cut(s) 1907
BsaHI GRCGYC 1 cut(s) 881
BsaI GGTCTC 1 cut(s) 1053
BsaJI CCNNGG 4 cut(s) 241, 357, 1148, 1661
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 1068, 1265
Bse1I ACTGG 4 cut(s) 562, 631, 1930, 2122
Bse3DI GCAATG 1 cut(s) 1278
Bse8I GATNNNNATC 1 cut(s) 1907
BseBI CCWGG 4 cut(s) 242, 308, 639, 819
BseDI CCNNGG 4 cut(s) 241, 357, 1148, 1661
BseGI GGATG 8 cut(s) 154, 760, 1093, 1165, 1210, 1616, 1948, 1963
BseJI GATNNNNATC 1 cut(s) 1907
BseLI CCNNNNNNNGG 3 cut(s) 145, 1068, 1265
BseMI GCAATG 1 cut(s) 1278
BseMII CTCAG 3 cut(s) 95, 116, 660
BseNI ACTGG 4 cut(s) 562, 631, 1930, 2122
BseSI GKGCMC 1 cut(s) 248
BseXI GCAGC 5 cut(s) 801, 1045, 1413, 1779, 2143
BsgI GTGCAG 2 cut(s) 1778, 2003
Bsh1236I CGCG 2 cut(s) 511, 1843
Bsh1285I CGRYCG 1 cut(s) 1847
BshFI GGCC 5 cut(s) 86, 872, 1084, 1500, 2121
BsiEI CGRYCG 1 cut(s) 1847
BsiHKAI GWGCWC 2 cut(s) 565, 1921
BsiHKCI CYCGRG 2 cut(s) 718, 1690
BslFI GGGAC 2 cut(s) 494, 1880
BslI CCNNNNNNNGG 3 cut(s) 145, 1068, 1265
BsmAI GTCTC 6 cut(s) 521, 665, 910, 1053, 1314, 1645
BsmBI CGTCTC 1 cut(s) 910
BsmFI GGGAC 2 cut(s) 494, 1880
BsnI GGCC 5 cut(s) 86, 872, 1084, 1500, 2121
Bso31I GGTCTC 1 cut(s) 1053
BsoBI CYCGRG 2 cut(s) 718, 1690
Bsp1286I GDGCHC 6 cut(s) 54, 248, 565, 1346, 1661, 1921
Bsp1407I TGTACA 1 cut(s) 976
Bsp143I GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
BspACI CCGC 4 cut(s) 337, 382, 1778, 1843
BspANI GGCC 5 cut(s) 86, 872, 1084, 1500, 2121
BspCNI CTCAG 3 cut(s) 94, 115, 661
BspFNI CGCG 2 cut(s) 511, 1843
BspLI GGNNCC 3 cut(s) 355, 599, 1345
BspMAI CTGCAG 1 cut(s) 2104
BspPI GGATC 3 cut(s) 348, 637, 1994
BspTI CTTAAG 1 cut(s) 1990
BspTNI GGTCTC 1 cut(s) 1053
BsrDI GCAATG 1 cut(s) 1278
BsrGI TGTACA 1 cut(s) 976
BsrI ACTGG 4 cut(s) 562, 631, 1930, 2122
BssECI CCNNGG 4 cut(s) 241, 357, 1148, 1661
BssMI GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
BssNI GRCGYC 1 cut(s) 881
BssT1I CCWWGG 3 cut(s) 357, 1148, 1661
Bst2UI CCWGG 4 cut(s) 242, 308, 639, 819
Bst4CI ACNGT 4 cut(s) 485, 597, 1089, 1671
Bst6I CTCTTC 1 cut(s) 1452
BstACI GRCGYC 1 cut(s) 881
BstAFI CTTAAG 1 cut(s) 1990
BstAUI TGTACA 1 cut(s) 976
BstC8I GCNNGC 3 cut(s) 364, 497, 1711
BstDEI CTNAG 4 cut(s) 81, 102, 669, 1937
BstF5I GGATG 8 cut(s) 154, 760, 1093, 1165, 1210, 1616, 1948, 1963
BstFNI CGCG 2 cut(s) 511, 1843
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 6 cut(s) 9, 304, 343, 632, 1569, 2002
BstMAI GTCTC 6 cut(s) 521, 665, 910, 1053, 1314, 1645
BstMBI GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
BstMCI CGRYCG 1 cut(s) 1847
BstMWI GCNNNNNNNGC 2 cut(s) 1297, 1583
BstNI CCWGG 4 cut(s) 242, 308, 639, 819
BstNSI RCATGY 3 cut(s) 499, 1122, 1375
BstSCI CCNGG 4 cut(s) 240, 306, 637, 817
BstSFI CTRYAG 1 cut(s) 2100
BstSLI GKGCMC 1 cut(s) 248
BstUI CGCG 2 cut(s) 511, 1843
BstV1I GCAGC 5 cut(s) 801, 1045, 1413, 1779, 2143
BstV2I GAAGAC 2 cut(s) 364, 1065
BstX2I RGATCY 2 cut(s) 6, 340
BstYI RGATCY 2 cut(s) 6, 340
BsuI GTATCC 1 cut(s) 1481
BsuRI GGCC 5 cut(s) 86, 872, 1084, 1500, 2121
BtgZI GCGATG 1 cut(s) 1905
BtrI CACGTC 2 cut(s) 175, 1900
BtsCI GGATG 8 cut(s) 154, 760, 1093, 1165, 1210, 1616, 1948, 1963
BtsI GCAGTG 2 cut(s) 1528, 2034
BtsIMutI CAGTG 5 cut(s) 1085, 1528, 1885, 2034, 2129
Cac8I GCNNGC 3 cut(s) 364, 497, 1711
CfoI GCGC 1 cut(s) 513
Cfr13I GGNCC 1 cut(s) 384
CseI GACGC 1 cut(s) 517
Csp6I GTAC 5 cut(s) 19, 456, 892, 977, 1849
CviQI GTAC 5 cut(s) 19, 456, 892, 977, 1849
DdeI CTNAG 4 cut(s) 81, 102, 669, 1937
DpnI GATC 6 cut(s) 8, 303, 342, 631, 1568, 2001
DpnII GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
EaeI YGGCCR 3 cut(s) 870, 1082, 2119
Eam1104I CTCTTC 1 cut(s) 1452
EarI CTCTTC 1 cut(s) 1452
Eco130I CCWWGG 3 cut(s) 357, 1148, 1661
Eco147I AGGCCT 1 cut(s) 1500
Eco24I GRGCYC 3 cut(s) 54, 1346, 1661
Eco31I GGTCTC 1 cut(s) 1053
Eco47I GGWCC 1 cut(s) 384
Eco88I CYCGRG 2 cut(s) 718, 1690
EcoRI GAATTC 1 cut(s) 227
EcoRII CCWGG 4 cut(s) 240, 306, 637, 817
EcoT14I CCWWGG 3 cut(s) 357, 1148, 1661
EcoT22I ATGCAT 1 cut(s) 1265
EcoT38I GRGCYC 3 cut(s) 54, 1346, 1661
ErhI CCWWGG 3 cut(s) 357, 1148, 1661
Esp3I CGTCTC 1 cut(s) 910
FalI AAGNNNNNCTT 6 cut(s) 562, 594, 1331, 1363, 2063, 2095
FaqI GGGAC 2 cut(s) 494, 1880
FauI CCCGC 1 cut(s) 330
FauNDI CATATG 1 cut(s) 773
Fnu4HI GCNGC 6 cut(s) 815, 1059, 1402, 1779, 1793, 2132
FokI GGATG 8 cut(s) 161, 747, 1080, 1152, 1217, 1603, 1955, 1970
FriOI GRGCYC 3 cut(s) 54, 1346, 1661
Fsp4HI GCNGC 6 cut(s) 815, 1059, 1402, 1779, 1793, 2132
FspBI CTAG 5 cut(s) 587, 969, 1407, 1482, 1686
GlaI GCGC 1 cut(s) 512
GluI GCNGC 6 cut(s) 815, 1059, 1402, 1779, 1793, 2132
GsuI CTGGAG 1 cut(s) 290
HaeIII GGCC 5 cut(s) 86, 872, 1084, 1500, 2121
HgaI GACGC 1 cut(s) 517
HhaI GCGC 1 cut(s) 513
Hin1I GRCGYC 1 cut(s) 881
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HincII GTYRAC 3 cut(s) 214, 1753, 2077
HindII GTYRAC 3 cut(s) 214, 1753, 2077
HindIII AAGCTT 4 cut(s) 287, 1139, 1319, 2050
HinfI GANTC 7 cut(s) 191, 276, 673, 1391, 1903, 1961, 2096
HphI GGTGA 4 cut(s) 759, 1220, 1368, 1547
Hpy166II GTNNAC 6 cut(s) 78, 214, 977, 979, 1753, 2077
Hpy188I TCNGA 5 cut(s) 105, 507, 1032, 1196, 1336
Hpy8I GTNNAC 6 cut(s) 78, 214, 977, 979, 1753, 2077
HpyAV CCTTC 5 cut(s) 471, 641, 774, 1857, 2145
HpyCH4III ACNGT 4 cut(s) 485, 597, 1089, 1671
HpyCH4IV ACGT 5 cut(s) 174, 881, 1515, 1531, 1899
HpyF10VI GCNNNNNNNGC 2 cut(s) 1297, 1583
HpyF3I CTNAG 4 cut(s) 81, 102, 669, 1937
HpySE526I ACGT 5 cut(s) 174, 881, 1515, 1531, 1899
Hsp92I GRCGYC 1 cut(s) 881
HspAI GCGC 1 cut(s) 511
Kzo9I GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
LmnI GCTCC 2 cut(s) 1268, 1349
Lsp1109I GCAGC 5 cut(s) 801, 1045, 1413, 1779, 2143
LweI GCATC 3 cut(s) 139, 1917, 2096
MaeI CTAG 5 cut(s) 587, 969, 1407, 1482, 1686
MaeII ACGT 5 cut(s) 174, 881, 1515, 1531, 1899
MaeIII GTNAC 8 cut(s) 188, 236, 751, 1089, 1219, 1353, 1374, 2093
MalI GATC 6 cut(s) 8, 303, 342, 631, 1568, 2001
MboI GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
MfeI CAATTG 1 cut(s) 1436
MflI RGATCY 2 cut(s) 6, 340
MhlI GDGCHC 6 cut(s) 54, 248, 565, 1346, 1661, 1921
MlsI TGGCCA 3 cut(s) 872, 1084, 2121
MluNI TGGCCA 3 cut(s) 872, 1084, 2121
MlyI GAGTC 5 cut(s) 185, 270, 667, 1385, 2090
Mox20I TGGCCA 3 cut(s) 872, 1084, 2121
Mph1103I ATGCAT 1 cut(s) 1265
MroXI GAANNNNTTC 2 cut(s) 992, 1037
MscI TGGCCA 3 cut(s) 872, 1084, 2121
MseI TTAA 5 cut(s) 24, 441, 1764, 1991, 2016
MslI CAYNNNNRTG 4 cut(s) 204, 772, 1023, 2115
Msp20I TGGCCA 3 cut(s) 872, 1084, 2121
MspA1I CMGCKG 1 cut(s) 1748
MspCI CTTAAG 1 cut(s) 1990
MspR9I CCNGG 4 cut(s) 242, 308, 639, 819
MunI CAATTG 1 cut(s) 1436
MvaI CCWGG 4 cut(s) 242, 308, 639, 819
MvnI CGCG 2 cut(s) 511, 1843
MwoI GCNNNNNNNGC 2 cut(s) 1297, 1583
NdeI CATATG 1 cut(s) 773
NdeII GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
NlaIV GGNNCC 3 cut(s) 355, 599, 1345
NmuCI GTSAC 4 cut(s) 188, 236, 1374, 2093
NsiI ATGCAT 1 cut(s) 1265
NspI RCATGY 3 cut(s) 499, 1122, 1375
PaeI GCATGC 1 cut(s) 499
PaeR7I CTCGAG 2 cut(s) 718, 1690
PceI AGGCCT 1 cut(s) 1500
PciI ACATGT 2 cut(s) 1118, 1371
PdmI GAANNNNTTC 2 cut(s) 992, 1037
PfeI GAWTC 2 cut(s) 1903, 1961
PfoI TCCNGGA 1 cut(s) 306
PkrI GCNGC 6 cut(s) 816, 1060, 1403, 1780, 1794, 2133
PleI GAGTC 5 cut(s) 185, 270, 667, 1385, 2090
PpsI GAGTC 5 cut(s) 185, 270, 667, 1385, 2090
PscI ACATGT 2 cut(s) 1118, 1371
PsiI TTATAA 1 cut(s) 912
Psp1406I AACGTT 1 cut(s) 1531
Psp6I CCWGG 4 cut(s) 240, 306, 637, 817
PspGI CCWGG 4 cut(s) 240, 306, 637, 817
PspN4I GGNNCC 3 cut(s) 355, 599, 1345
PspPI GGNCC 1 cut(s) 384
PspXI VCTCGAGB 1 cut(s) 718
PstI CTGCAG 1 cut(s) 2104
PsuI RGATCY 2 cut(s) 6, 340
PvuII CAGCTG 1 cut(s) 1748
RsaI GTAC 5 cut(s) 20, 457, 893, 978, 1850
RsaNI GTAC 5 cut(s) 19, 456, 892, 977, 1849
RseI CAYNNNNRTG 4 cut(s) 204, 772, 1023, 2115
SaqAI TTAA 5 cut(s) 24, 441, 1764, 1991, 2016
SatI GCNGC 6 cut(s) 815, 1059, 1402, 1779, 1793, 2132
Sau3AI GATC 6 cut(s) 6, 301, 340, 629, 1566, 1999
Sau96I GGNCC 1 cut(s) 384
ScaI AGTACT 1 cut(s) 893
SchI GAGTC 5 cut(s) 185, 270, 667, 1385, 2090
ScrFI CCNGG 4 cut(s) 242, 308, 639, 819
SduI GDGCHC 6 cut(s) 54, 248, 565, 1346, 1661, 1921
SfaNI GCATC 3 cut(s) 139, 1917, 2096
SfcI CTRYAG 1 cut(s) 2100
Sfr274I CTCGAG 2 cut(s) 718, 1690
SinI GGWCC 1 cut(s) 384
SlaI CTCGAG 2 cut(s) 718, 1690
SmiMI CAYNNNNRTG 4 cut(s) 204, 772, 1023, 2115
SmlI CTYRAG 5 cut(s) 675, 718, 1042, 1690, 1990
SmoI CTYRAG 5 cut(s) 675, 718, 1042, 1690, 1990
SpeI ACTAGT 1 cut(s) 968
SphI GCATGC 1 cut(s) 499
SseBI AGGCCT 1 cut(s) 1500
SsiI CCGC 4 cut(s) 337, 382, 1778, 1843
SspI AATATT 1 cut(s) 1977
SspMI CTAG 5 cut(s) 587, 969, 1407, 1482, 1686
StuI AGGCCT 1 cut(s) 1500
StyD4I CCNGG 4 cut(s) 240, 306, 637, 817
StyI CCWWGG 3 cut(s) 357, 1148, 1661
TaaI ACNGT 4 cut(s) 485, 597, 1089, 1671
TaiI ACGT 5 cut(s) 177, 884, 1518, 1534, 1902
TaqI TCGA 9 cut(s) 292, 300, 405, 719, 1021, 1359, 1431, 1691, 2090
TatI WGTACW 3 cut(s) 455, 891, 976
TauI GCSGC 1 cut(s) 1781
TfiI GAWTC 2 cut(s) 1903, 1961
Tru1I TTAA 5 cut(s) 24, 441, 1764, 1991, 2016
Tru9I TTAA 5 cut(s) 24, 441, 1764, 1991, 2016
TscAI CASTG 5 cut(s) 1092, 1528, 1885, 2041, 2129
TseFI GTSAC 4 cut(s) 188, 236, 1374, 2093
TseI GCWGC 5 cut(s) 814, 1058, 1401, 1792, 2131
Tsp45I GTSAC 4 cut(s) 188, 236, 1374, 2093
TspGWI ACGGA 2 cut(s) 872, 1302
TspRI CASTG 5 cut(s) 1092, 1528, 1885, 2041, 2129
Vha464I CTTAAG 1 cut(s) 1990
VpaK11BI GGWCC 1 cut(s) 384
XapI RAATTY 7 cut(s) 227, 329, 534, 1033, 1456, 1580, 1969
XceI RCATGY 3 cut(s) 499, 1122, 1375
XcmI CCANNNNNNNNNTGG 1 cut(s) 2055
XhoI CTCGAG 2 cut(s) 718, 1690
XmnI GAANNNNTTC 2 cut(s) 992, 1037
XspI CTAG 5 cut(s) 587, 969, 1407, 1482, 1686
ZraI GACGTC 1 cut(s) 882
ZrmI AGTACT 1 cut(s) 893
Zsp2I ATGCAT 1 cut(s) 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.