Rroxscaffold_5G00350110

Ion channel CASTOR-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
23762950 .. 23772771
9822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00350110.1

Sequence Viewer

Length: 2901 bp
ATGTCCCTCAACTCCGACTCAGCAGTCCCTTCCTCCAGCAGAGACTGGTACTTTCCCTCACCGCCCTTCATCCACGCAGCGAAATCCCCAAAATACCACCGAAGATTCTCCACAAACCCCAGACCATCCCCACCCCTCCCCACCGATTCTCAGCCGCCATTTGGTCCGGCGACGCCGTTTCGCGCCGTTTCGTCCTCCAGCTCCGCCCCTCCGAGAACTTTCAGCCATGACAGGCCCCGCCGGAGAGTTGACTTCCCCCGTCGGCGGGAGAAGCCGCCGCGAAACGATGTCAACCAGCCCGTTTCCGGCGTCCCCGACGGCCTCTCCAAAAAACGATCGGAGGCTTCCGCCGCCGTCTCCGGCGACAAGTTCATTAGCTTTTCCTGCCTCGGCTTCAAACTCCGGTGGAAAATGGCTTTTTCAGTAGCGATTTTGATGACGGTTTTGTCATCAGTGGTGTACCAAAACTTCTGTTTACATAGCCAAGTCAATGAGTTGCAGGATTATATTTCCAAGCTTGAATTGAGATTACAAGCCTACAATTCGTTAGAATCTATGGAGCTCATCGCTTCTTCTGGGCTGGAGGATGATGATCTTCCTAACAGAAGCTTAAAACGATTAGCGCTTATGGTCTCCCTCATGCTTTTATCAATCCCTCTTGTGGTTTTCAAGTACATTGACTATGTCTCGAGATCACGGTCACCAGAGAACATCTCTGAAGAAGAATCTCTAAACAAACAGCTAGCGTACCGTGTTGATTTGTTTTTATCAGTCCACCCGTATTCTAAGCCACTGGCATTGTTGGTTGCAACACTGTTACTTATTTGTCTTGGGGGGTTAGCATTGTTTGGAGTGAAAGATGATAGCTTGGCAGAATGTCTTTGGTTATCGTGGACGTATGTAGCTGATTCTGGCAACCATACTGACTCTGAAAAAATTGGCGAAAGGCTTGTTTCAGTTTCCATTAGCTTTGGTGGGATGCTCATATTTGCAATGATGCTTGGACTTGTTTCTGATGCAATTTCGGAGAAGTTTGACTCATTGAGGAAAGGAAGAAGTGAGGTTGTGGAGCAAAACCATACTTTAATTCTCGGTTGGAGCGATAAATTGGGATCATTATTGAACCAGATTGCAATAGCTAATGAGAGTTTGGGTGGAGGGATTGTTGTAGTTATGGCTGAGCGAGACAAAGAGGAAATGGAACTTGACATTGGTAAAATGGAGTTTGATTTCAAAGGAACATCTGTAATATGCAGAAGTGGGAGCCCTCTTATTCTTGCTGACCTGAAAAAGGTATCTGTCTCCAAGGCACGTGCAATAATTGTCCTTGCTGAAGACGGAAATGCTGATCAGAGTGATGCCCGTGCATTGAGAACTGTTTTAAGTCTAACCGGAGTGAAAGAGGGGCTGAGGGGACATATTGTAGTTGAACTAAGTGATCTTGACAATGAGGTTCTTGTTAAACTTGTTGGTGGAGATCTTGTTGAAACTGTTGTGGCTCATGATGTAATTGGTCGTCTGATGATTCAATGTGCTAGGCAGCCCGGACTTGCACAGATCTGGGAAGATATCCTTGGATTTGAAAATTGCGAGTTCTATATCAAAAGATGGCCACAGTTGGATGGCATGCATTTTGAGGATGTACTGATCAGTTTTCCTGATGCCATTCCTTGTGGAGTCAAGGTTGCATCATTGGGTGGTAGAATTATTTTGAACCCGGATGACTCTTATGTTCTACAAGAAGGTGATGAAGTACTTGTCATAGCAGAGGATGACGATACCTATGCTCCTGCAGCATTGCCTATGGTCAAGAGTAGCTTCAATCCCTTGTTATCTGAAAGAAGCATATTGAAGGTCAAAGAGGCATCTTTCATTCAAATTTCCCGAACAGCAAGAAAGCCACAGAAGATTCTACTTTGTGGATGGAGGAGGGACATAGATGATATGCTTGTGGTATGGAGAGGAAGTCTACCCAAAGACTTTGTTGTTCCAAAGTCTGCAGAAAGGATACTTTTATGTGGTTGGCGGCGAGATATGGAGGATATGATTATGGTAATGCCACAAGATGTCTGCAATCATGCTCCTAGTACTTGGGGTGCAGTTCTAGTATACAACATATTAACTGATGATAATCATCCTGTGTTGGATGCCTTTCTGGCCCCGGGTTCGGAGCTCTGGATGTTCAATGACGTTGCTGAGAAGGAGAGGAAAAAGAAGCTCATTGATGGAGGTCTTGAAATCAGTCGTTTAGTAAATATAACTTTAGTTGACCGTGAGGGAAATGCTGTCATACGCCGTCATTTAGAAAGTCTTCCTTTGCAATCTTTTGATTCGATCTTAATTTTGGCTGATGAGTCTGTGGAAGACTCAGCAATTCAAGCTGATTCAAGATCTCTTGCCACATTGCTTTTGATTCGTGATATTCAGGCTAAGCGTCTCCCTATGGTAACACATGTTGATAGAGGAAGCTTTTCACAAAGTTCATGGATAGGGGAAATGCAGCAAGCTTCAGATAAATCGGTTATAATTAGTGAAATTCTGGACCCAAGGACTAAAAATTTATTATCCATGTCAAAGATCAGCGACTATGTGCTATCGAATGAGCTTGTCAGCATGGCGCTGGCTATGGTAGCAGAGGATCGGCAAATAAATGATGTATTGGAAGAGCTGTTTGCAGAGGAGGGTAACGAATTGCAAATAAGGCAAGGAGATCTGTATCTCCATGAAGGTGAGGAGTTAAGCTTCTATGAAGTACTCTTGCGCGCCCGACAAAGGAGGGAGGTCATGATTGGTTATCGCTTAGCTGATGCTGAGAGAGCTGTCATCAACCCCCCGGCTAAAAGTGAGAGACGGAGGTGGTCGGTGAAGGATGTATTTGTGGTGATTGCAGAGAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

966

Amino Acids

107.83

Weight (kDa)

5.35

Isoelectric Point (pI)

56.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Castor_Poll_mid PF06241 501 - 598 1.1e-42 Castor and Pollux, part of voltage-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2525
AasI GACNNNNNNGTC 2 cut(s) 23, 445
AccI GTMKAC 2 cut(s) 1969, 2109
AccII CGCG 3 cut(s) 183, 280, 2763
AclWI GGATC 2 cut(s) 1120, 2646
AcoI YGGCCR 1 cut(s) 1610
AcsI RAATTY 3 cut(s) 1878, 2535, 2557
AcuI CTGAAG 3 cut(s) 738, 1353, 2493
AcvI CACGTG 1 cut(s) 1313
AcyI GRCGYC 2 cut(s) 173, 309
AfaI GTAC 8 cut(s) 50, 461, 674, 749, 1644, 1755, 2089, 2754
AfeI AGCGCT 1 cut(s) 624
AfiI CCNNNNNNNGG 8 cut(s) 161, 264, 265, 305, 661, 1291, 2167, 2772
AflIII ACRYGT 1 cut(s) 2452
AjuI GAANNNNNNNTTGG 4 cut(s) 1194, 1226, 1557, 1589
Alw21I GWGCWC 2 cut(s) 564, 2175
Alw26I GTCTC 8 cut(s) 36, 361, 637, 691, 1179, 1306, 2441, 2842
AlwI GGATC 2 cut(s) 1120, 2646
AlwNI CAGNNNCTG 1 cut(s) 45
Ama87I CYCGRG 2 cut(s) 688, 2161
Aor51HI AGCGCT 1 cut(s) 624
AoxI GGCC 4 cut(s) 233, 319, 1610, 2157
ApeKI GCWGC 4 cut(s) 77, 1540, 1793, 2500
ApoI RAATTY 3 cut(s) 1878, 2535, 2557
Asp700I GAANNNNTTC 2 cut(s) 2310, 2470
AspLEI GCGC 5 cut(s) 185, 625, 2620, 2763, 2765
AspS9I GGNCC 4 cut(s) 164, 234, 2158, 2542
AsuC2I CCSGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
AsuHPI GGTGA 6 cut(s) 51, 693, 1757, 2741, 2875, 2893
AsuNHI GCTAGC 1 cut(s) 742
AvaI CYCGRG 2 cut(s) 688, 2161
AvaII GGWCC 2 cut(s) 164, 2542
BalI TGGCCA 1 cut(s) 1612
BanII GRGCYC 3 cut(s) 564, 1268, 2175
BarI GAAGNNNNNNTAC 2 cut(s) 452, 484
BbrPI CACGTG 1 cut(s) 1313
BbsI GAAGAC 3 cut(s) 1341, 2303, 2370
Bbv12I GWGCWC 2 cut(s) 564, 2175
BbvCI CCTCAGC 1 cut(s) 1409
BbvI GCAGC 4 cut(s) 89, 1552, 1805, 2512
BccI CCATC 5 cut(s) 133, 1602, 1616, 1917, 2219
BceAI ACGGC 5 cut(s) 160, 170, 334, 338, 2280
BcgI CGANNNNNNTGC 2 cut(s) 1766, 1800
BciVI GTATCC 1 cut(s) 2001
BclI TGATCA 2 cut(s) 1348, 1647
BcnI CCSGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
BcoDI GTCTC 8 cut(s) 36, 361, 637, 691, 1179, 1306, 2441, 2842
BfaI CTAG 4 cut(s) 743, 1536, 2085, 2105
BfmI CTRYAG 2 cut(s) 1791, 1998
BfoI RGCGCY 2 cut(s) 626, 2621
BfuI GTATCC 1 cut(s) 2001
BglI GCCNNNNNGGC 1 cut(s) 2156
BglII AGATCT 4 cut(s) 1477, 1557, 2390, 2710
BisI GCNGC 9 cut(s) 78, 155, 275, 278, 351, 1541, 1794, 2027, 2501
BlpI GCTNAGC 3 cut(s) 1179, 2430, 2800
BlsI GCNGC 9 cut(s) 79, 156, 276, 279, 352, 1542, 1795, 2028, 2502
BmcAI AGTACT 3 cut(s) 1755, 2089, 2754
Bme1390I CCNGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
Bme18I GGWCC 2 cut(s) 164, 2542
BmeT110I CYCGRG 2 cut(s) 688, 2161
BmgT120I GGNCC 4 cut(s) 164, 234, 2158, 2542
BmiI GGNNCC 4 cut(s) 236, 1265, 2160, 2544
BmrFI CCNGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
BmsI GCATC 9 cut(s) 969, 987, 1006, 1348, 1651, 1697, 1874, 2137, 2797
BmtI GCTAGC 1 cut(s) 746
BpiI GAAGAC 3 cut(s) 1341, 2303, 2370
BplI GAGNNNNNCTC 2 cut(s) 698, 730
BpmI CTGGAG 3 cut(s) 19, 181, 602
Bpu10I CCTNAGC 1 cut(s) 1409
Bpu1102I GCTNAGC 3 cut(s) 1179, 2430, 2800
BpuMI CCSGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
BsaAI YACGTR 1 cut(s) 1313
BsaBI GATNNNNATC 4 cut(s) 591, 2130, 2133, 2715
BsaHI GRCGYC 2 cut(s) 173, 309
BsaI GGTCTC 1 cut(s) 637
BsaJI CCNNGG 7 cut(s) 388, 1305, 1573, 2160, 2161, 2546, 2832
BsaWI WCCGGW 2 cut(s) 402, 1391
Bsc4I CCNNNNNNNGG 8 cut(s) 161, 264, 265, 305, 661, 1291, 2167, 2772
Bse1I ACTGG 2 cut(s) 50, 798
Bse3DI GCAATG 3 cut(s) 999, 1796, 2402
Bse8I GATNNNNATC 4 cut(s) 591, 2130, 2133, 2715
BseDI CCNNGG 7 cut(s) 388, 1305, 1573, 2160, 2161, 2546, 2832
BseJI GATNNNNATC 4 cut(s) 591, 2130, 2133, 2715
BseLI CCNNNNNNNGG 8 cut(s) 161, 264, 265, 305, 661, 1291, 2167, 2772
BseMI GCAATG 3 cut(s) 999, 1796, 2402
BseMII CTCAG 7 cut(s) 33, 164, 1170, 1400, 2187, 2382, 2802
BseNI ACTGG 2 cut(s) 50, 798
BsePI GCGCGC 1 cut(s) 2761
BseRI GAGGAG 3 cut(s) 1942, 2693, 2747
BseXI GCAGC 4 cut(s) 89, 1552, 1805, 2512
BsgI GTGCAG 1 cut(s) 2118
Bsh1236I CGCG 3 cut(s) 183, 280, 2763
Bsh1285I CGRYCG 1 cut(s) 338
BshFI GGCC 4 cut(s) 235, 321, 1612, 2159
BsiEI CGRYCG 1 cut(s) 338
BsiHKAI GWGCWC 2 cut(s) 564, 2175
BsiHKCI CYCGRG 2 cut(s) 688, 2161
BslFI GGGAC 4 cut(s) 11, 296, 1428, 1946
BslI CCNNNNNNNGG 8 cut(s) 161, 264, 265, 305, 661, 1291, 2167, 2772
BsmAI GTCTC 8 cut(s) 36, 361, 637, 691, 1179, 1306, 2441, 2842
BsmBI CGTCTC 3 cut(s) 361, 2441, 2842
BsmFI GGGAC 4 cut(s) 11, 296, 1428, 1946
BsnI GGCC 4 cut(s) 235, 321, 1612, 2159
Bso31I GGTCTC 1 cut(s) 637
BsoBI CYCGRG 2 cut(s) 688, 2161
Bsp1286I GDGCHC 3 cut(s) 564, 1268, 2175
Bsp1720I GCTNAGC 3 cut(s) 1179, 2430, 2800
BspANI GGCC 4 cut(s) 235, 321, 1612, 2159
BspCNI CTCAG 7 cut(s) 32, 163, 1171, 1401, 2188, 2381, 2803
BspFNI CGCG 3 cut(s) 183, 280, 2763
BspHI TCATGA 2 cut(s) 1501, 2784
BspLI GGNNCC 4 cut(s) 236, 1265, 2160, 2544
BspMAI CTGCAG 2 cut(s) 1795, 2002
BspOI GCTAGC 1 cut(s) 746
BspPI GGATC 2 cut(s) 1120, 2646
BspQI GCTCTTC 1 cut(s) 2658
BspTNI GGTCTC 1 cut(s) 637
BsrDI GCAATG 3 cut(s) 999, 1796, 2402
BsrI ACTGG 2 cut(s) 50, 798
BssECI CCNNGG 7 cut(s) 388, 1305, 1573, 2160, 2161, 2546, 2832
BssHII GCGCGC 1 cut(s) 2761
BssNAI GTATAC 1 cut(s) 2110
BssNI GRCGYC 2 cut(s) 173, 309
BssT1I CCWWGG 3 cut(s) 1305, 1573, 2546
Bst1107I GTATAC 1 cut(s) 2110
Bst4CI ACNGT 8 cut(s) 442, 699, 752, 816, 1378, 1492, 1617, 2273
Bst6I CTCTTC 1 cut(s) 2658
BstACI GRCGYC 2 cut(s) 173, 309
BstBAI YACGTR 1 cut(s) 1313
BstC8I GCNNGC 5 cut(s) 744, 1628, 2505, 2622, 2763
BstEII GGTNACC 1 cut(s) 699
BstENI CCTNNNNNAGG 1 cut(s) 1289
BstFNI CGCG 3 cut(s) 183, 280, 2763
BstH2I RGCGCY 2 cut(s) 626, 2621
BstHHI GCGC 5 cut(s) 185, 625, 2620, 2763, 2765
BstMAI GTCTC 8 cut(s) 36, 361, 637, 691, 1179, 1306, 2441, 2842
BstMCI CGRYCG 1 cut(s) 338
BstMWI GCNNNNNNNGC 9 cut(s) 271, 350, 384, 1793, 2156, 2378, 2630, 2701, 2816
BstNSI RCATGY 2 cut(s) 1630, 2456
BstPI GGTNACC 1 cut(s) 699
BstSCI CCNGG 5 cut(s) 1543, 1716, 2160, 2161, 2832
BstSFI CTRYAG 2 cut(s) 1791, 1998
BstUI CGCG 3 cut(s) 183, 280, 2763
BstV1I GCAGC 4 cut(s) 89, 1552, 1805, 2512
BstV2I GAAGAC 3 cut(s) 1341, 2303, 2370
BstX2I RGATCY 4 cut(s) 1477, 1557, 2390, 2710
BstYI RGATCY 4 cut(s) 1477, 1557, 2390, 2710
BstZ17I GTATAC 1 cut(s) 2110
BsuI GTATCC 1 cut(s) 2001
BsuRI GGCC 4 cut(s) 235, 321, 1612, 2159
BtgZI GCGATG 1 cut(s) 550
BtsIMutI CAGTG 3 cut(s) 459, 791, 812
Cac8I GCNNGC 5 cut(s) 744, 1628, 2505, 2622, 2763
CaiI CAGNNNCTG 1 cut(s) 45
CciI TCATGA 2 cut(s) 1501, 2784
CfoI GCGC 5 cut(s) 185, 625, 2620, 2763, 2765
Cfr13I GGNCC 4 cut(s) 164, 234, 2158, 2542
Cfr9I CCCGGG 1 cut(s) 2161
CseI GACGC 3 cut(s) 181, 298, 2423
Csp6I GTAC 8 cut(s) 49, 460, 673, 748, 1643, 1754, 2088, 2753
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviQI GTAC 8 cut(s) 49, 460, 673, 748, 1643, 1754, 2088, 2753
DrdI GACNNNNNNGTC 2 cut(s) 23, 445
DseDI GACNNNNNNGTC 2 cut(s) 23, 445
EaeI YGGCCR 1 cut(s) 1610
Eam1104I CTCTTC 1 cut(s) 2658
EarI CTCTTC 1 cut(s) 2658
EciI GGCGGA 2 cut(s) 193, 337
Ecl136II GAGCTC 2 cut(s) 562, 2173
Eco130I CCWWGG 3 cut(s) 1305, 1573, 2546
Eco24I GRGCYC 3 cut(s) 564, 1268, 2175
Eco31I GGTCTC 1 cut(s) 637
Eco32I GATATC 1 cut(s) 1570
Eco47I GGWCC 2 cut(s) 164, 2542
Eco47III AGCGCT 1 cut(s) 624
Eco53kI GAGCTC 2 cut(s) 562, 2173
Eco57I CTGAAG 3 cut(s) 738, 1353, 2493
Eco72I CACGTG 1 cut(s) 1313
Eco88I CYCGRG 2 cut(s) 688, 2161
Eco91I GGTNACC 1 cut(s) 699
EcoICRI GAGCTC 2 cut(s) 562, 2173
EcoNI CCTNNNNNAGG 1 cut(s) 1289
EcoO109I RGGNCCY 1 cut(s) 234
EcoO65I GGTNACC 1 cut(s) 699
EcoRV GATATC 1 cut(s) 1570
EcoT14I CCWWGG 3 cut(s) 1305, 1573, 2546
EcoT22I ATGCAT 1 cut(s) 1632
EcoT38I GRGCYC 3 cut(s) 564, 1268, 2175
ErhI CCWWGG 3 cut(s) 1305, 1573, 2546
Esp3I CGTCTC 3 cut(s) 361, 2441, 2842
FalI AAGNNNNNCTT 6 cut(s) 1557, 1589, 1802, 1834, 2299, 2331
FaqI GGGAC 4 cut(s) 11, 296, 1428, 1946
FauI CCCGC 2 cut(s) 245, 258
FbaI TGATCA 2 cut(s) 1348, 1647
FblI GTMKAC 2 cut(s) 1969, 2109
Fnu4HI GCNGC 9 cut(s) 78, 155, 275, 278, 351, 1541, 1794, 2027, 2501
FriOI GRGCYC 3 cut(s) 564, 1268, 2175
Fsp4HI GCNGC 9 cut(s) 78, 155, 275, 278, 351, 1541, 1794, 2027, 2501
FspBI CTAG 4 cut(s) 743, 1536, 2085, 2105
GlaI GCGC 5 cut(s) 184, 624, 2619, 2762, 2764
GluI GCNGC 9 cut(s) 78, 155, 275, 278, 351, 1541, 1794, 2027, 2501
GsuI CTGGAG 3 cut(s) 19, 181, 602
HaeII RGCGCY 2 cut(s) 626, 2621
HaeIII GGCC 4 cut(s) 235, 321, 1612, 2159
HgaI GACGC 3 cut(s) 181, 298, 2423
HhaI GCGC 5 cut(s) 185, 625, 2620, 2763, 2765
Hin1I GRCGYC 2 cut(s) 173, 309
Hin6I GCGC 5 cut(s) 183, 623, 2618, 2761, 2763
HinP1I GCGC 5 cut(s) 183, 623, 2618, 2761, 2763
HincII GTYRAC 3 cut(s) 250, 292, 2269
HindII GTYRAC 3 cut(s) 250, 292, 2269
HindIII AAGCTT 5 cut(s) 515, 607, 2467, 2505, 2740
HphI GGTGA 6 cut(s) 51, 693, 1757, 2741, 2875, 2893
Hpy166II GTNNAC 9 cut(s) 250, 292, 460, 476, 775, 894, 1970, 2110, 2269
Hpy8I GTNNAC 9 cut(s) 250, 292, 460, 476, 775, 894, 1970, 2110, 2269
Hpy99I CGWCG 3 cut(s) 175, 264, 320
HpyAV CCTTC 8 cut(s) 39, 76, 1736, 1846, 2194, 2720, 2860, 2887
HpyCH4III ACNGT 8 cut(s) 442, 699, 752, 816, 1378, 1492, 1617, 2273
HpyCH4IV ACGT 3 cut(s) 896, 1312, 2190
HpyF10VI GCNNNNNNNGC 9 cut(s) 271, 350, 384, 1793, 2156, 2378, 2630, 2701, 2816
HpySE526I ACGT 3 cut(s) 896, 1312, 2190
Hsp92I GRCGYC 2 cut(s) 173, 309
HspAI GCGC 5 cut(s) 183, 623, 2618, 2761, 2763
Ksp22I TGATCA 2 cut(s) 1348, 1647
LguI GCTCTTC 1 cut(s) 2658
LmnI GCTCC 8 cut(s) 206, 559, 1069, 1098, 1263, 1792, 2086, 2170
Lsp1109I GCAGC 4 cut(s) 89, 1552, 1805, 2512
LweI GCATC 9 cut(s) 969, 987, 1006, 1348, 1651, 1697, 1874, 2137, 2797
MaeI CTAG 4 cut(s) 743, 1536, 2085, 2105
MaeII ACGT 3 cut(s) 896, 1312, 2190
MaeIII GTNAC 4 cut(s) 699, 816, 2446, 2684
MflI RGATCY 4 cut(s) 1477, 1557, 2390, 2710
MhlI GDGCHC 3 cut(s) 564, 1268, 2175
MlsI TGGCCA 1 cut(s) 1612
MluNI TGGCCA 1 cut(s) 1612
MlyI GAGTC 7 cut(s) 11, 920, 1031, 1686, 1718, 2360, 2363
MmeI TCCRAC 4 cut(s) 39, 1076, 1599, 2124
Mox20I TGGCCA 1 cut(s) 1612
Mph1103I ATGCAT 1 cut(s) 1632
MroXI GAANNNNTTC 2 cut(s) 2310, 2470
MscI TGGCCA 1 cut(s) 1612
MseI TTAA 7 cut(s) 611, 1085, 1382, 1461, 2120, 2339, 2738
MslI CAYNNNNRTG 1 cut(s) 2727
Msp20I TGGCCA 1 cut(s) 1612
MspR9I CCNGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
MvnI CGCG 3 cut(s) 183, 280, 2763
MwoI GCNNNNNNNGC 9 cut(s) 271, 350, 384, 1793, 2156, 2378, 2630, 2701, 2816
NciI CCSGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
NheI GCTAGC 1 cut(s) 742
NlaIV GGNNCC 4 cut(s) 236, 1265, 2160, 2544
NmeAIII GCCGAG 1 cut(s) 369
NmuCI GTSAC 1 cut(s) 699
NsiI ATGCAT 1 cut(s) 1632
NspI RCATGY 2 cut(s) 1630, 2456
PaeI GCATGC 1 cut(s) 1630
PaeR7I CTCGAG 1 cut(s) 688
PagI TCATGA 2 cut(s) 1501, 2784
PauI GCGCGC 1 cut(s) 2761
PciI ACATGT 1 cut(s) 2452
PciSI GCTCTTC 1 cut(s) 2658
PcsI WCGNNNNNNNCGW 1 cut(s) 1098
PdmI GAANNNNTTC 2 cut(s) 2310, 2470
PflFI GACNNNGTC 1 cut(s) 683
PkrI GCNGC 9 cut(s) 79, 156, 276, 279, 352, 1542, 1795, 2028, 2502
Ple19I CGATCG 1 cut(s) 338
PleI GAGTC 7 cut(s) 11, 920, 1031, 1685, 1718, 2360, 2362
PmaCI CACGTG 1 cut(s) 1313
PmlI CACGTG 1 cut(s) 1313
PpsI GAGTC 7 cut(s) 11, 920, 1031, 1685, 1718, 2360, 2362
Ppu21I YACGTR 1 cut(s) 1313
PscI ACATGT 1 cut(s) 2452
PsiI TTATAA 1 cut(s) 2525
Psp124BI GAGCTC 2 cut(s) 564, 2175
PspCI CACGTG 1 cut(s) 1313
PspEI GGTNACC 1 cut(s) 699
PspN4I GGNNCC 4 cut(s) 236, 1265, 2160, 2544
PspPI GGNCC 4 cut(s) 164, 234, 2158, 2542
PstI CTGCAG 2 cut(s) 1795, 2002
PstNI CAGNNNCTG 1 cut(s) 45
PsuI RGATCY 4 cut(s) 1477, 1557, 2390, 2710
PsyI GACNNNGTC 1 cut(s) 683
PteI GCGCGC 1 cut(s) 2761
PvuI CGATCG 1 cut(s) 338
RsaI GTAC 8 cut(s) 50, 461, 674, 749, 1644, 1755, 2089, 2754
RsaNI GTAC 8 cut(s) 49, 460, 673, 748, 1643, 1754, 2088, 2753
RseI CAYNNNNRTG 1 cut(s) 2727
SacI GAGCTC 2 cut(s) 564, 2175
SapI GCTCTTC 1 cut(s) 2658
SaqAI TTAA 7 cut(s) 611, 1085, 1382, 1461, 2120, 2339, 2738
SatI GCNGC 9 cut(s) 78, 155, 275, 278, 351, 1541, 1794, 2027, 2501
Sau96I GGNCC 4 cut(s) 164, 234, 2158, 2542
ScaI AGTACT 3 cut(s) 1755, 2089, 2754
SchI GAGTC 7 cut(s) 11, 920, 1031, 1686, 1718, 2360, 2363
ScrFI CCNGG 5 cut(s) 1545, 1718, 2162, 2163, 2834
SduI GDGCHC 3 cut(s) 564, 1268, 2175
SfaNI GCATC 9 cut(s) 969, 987, 1006, 1348, 1651, 1697, 1874, 2137, 2797
SfcI CTRYAG 2 cut(s) 1791, 1998
Sfr274I CTCGAG 1 cut(s) 688
SinI GGWCC 2 cut(s) 164, 2542
SlaI CTCGAG 1 cut(s) 688
SmaI CCCGGG 1 cut(s) 2163
SmiMI CAYNNNNRTG 1 cut(s) 2727
SmlI CTYRAG 1 cut(s) 688
SmoI CTYRAG 1 cut(s) 688
SphI GCATGC 1 cut(s) 1630
SspMI CTAG 4 cut(s) 743, 1536, 2085, 2105
SstI GAGCTC 2 cut(s) 564, 2175
StyD4I CCNGG 5 cut(s) 1543, 1716, 2160, 2161, 2832
StyI CCWWGG 3 cut(s) 1305, 1573, 2546
TaaI ACNGT 8 cut(s) 442, 699, 752, 816, 1378, 1492, 1617, 2273
TaiI ACGT 3 cut(s) 899, 1315, 2193
TaqI TCGA 3 cut(s) 689, 2333, 2597
TatI WGTACW 5 cut(s) 672, 1642, 1753, 2087, 2752
TauI GCSGC 5 cut(s) 157, 277, 280, 353, 2029
Tru1I TTAA 7 cut(s) 611, 1085, 1382, 1461, 2120, 2339, 2738
Tru9I TTAA 7 cut(s) 611, 1085, 1382, 1461, 2120, 2339, 2738
TscAI CASTG 3 cut(s) 459, 798, 819
TseFI GTSAC 1 cut(s) 699
TseI GCWGC 4 cut(s) 77, 1540, 1793, 2500
Tsp45I GTSAC 1 cut(s) 699
TspDTI ATGAA 7 cut(s) 58, 361, 1764, 1861, 2472, 2739, 2763
TspGWI ACGGA 2 cut(s) 1353, 2866
TspMI CCCGGG 1 cut(s) 2161
TspRI CASTG 3 cut(s) 459, 798, 819
Tth111I GACNNNGTC 1 cut(s) 683
VpaK11BI GGWCC 2 cut(s) 164, 2542
XagI CCTNNNNNAGG 1 cut(s) 1289
XapI RAATTY 3 cut(s) 1878, 2535, 2557
XceI RCATGY 2 cut(s) 1630, 2456
XhoI CTCGAG 1 cut(s) 688
XmaI CCCGGG 1 cut(s) 2161
XmiI GTMKAC 2 cut(s) 1969, 2109
XmnI GAANNNNTTC 2 cut(s) 2310, 2470
XspI CTAG 4 cut(s) 743, 1536, 2085, 2105
ZrmI AGTACT 3 cut(s) 1755, 2089, 2754
Zsp2I ATGCAT 1 cut(s) 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.