Rw7G028790

Ion channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0001000
Physical Location & Seq
Reverse (-)
39541470 .. 39550549
9080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G028790.1

Sequence Viewer

Length: 2031 bp
ATGCCATTTGTGCTGTACAAACATCTTGATTATTTTTCCCATTTGACAATCCTCTCAAAAAACAAGAATAACAAAGAGGGGGTTCCCTTGAAGAAGAGGATAGCCTATATAGTGGATGTGTGCTTTTCTGTATATCCATATGCTAAACTACTTGCACTTCTCTTTGCAACAATATTACTAATAGGGTTTGGTGGACTGGCATTGTATGCAGTCAATAAAAATAGCTTTGCTGAAGCTCTTTGGCTTTCATGGACTTTTGTTGCTGATTCTGGAAACCATGCTGATACAGAGGGCATTGGGCCAAGGATAGTTTCTGTCTCTATTAGTTCAGGAGGCATGCTTATATTTGCGATGATGCTTGGGCTTGTTTCTGATGCTATATCAGAGAAGGTTGACTCACTAAGGAAAGGGAAGAGTGAAGTCATTGAAAGGAACCACATACTCGTTCTTGGATGGAGTGATAAACTGGGTTCGCTTCTCAAGCAGCTTGCTATAGCAAACAAGAGTGTTGGTGGTGGTGTTGTTGTTGTACTTGCTGAAAGAGACAAGGAGGAAATGGAGATAGATATTGCAAAACTTGAATTTGATTTCATGGGTACGTCTGTTATATGCAGAAGTGGCAGTCCTCTTATACTTGCTGACCTAAAGAAGGTCTCAGTTTCGAAGGCGCGTGCTATCATTGTATTGGCATCTGATGAAAATGCAGATCAGAGTGATGCACGTGCTCTGAGGGTTGTTCTAAGCCTCACTGGGGTGAAAGAGGGTTTGAGGGGACATGTTGTTGTAGAGATGAGTGACCTGGATAATGAGCCTCTTGTGAAGCTTGTTGGAGGAGAACTCATTGAAACAGTAGTAGCACATGATGTGATTGGGCGGTTAATGATACAGTGTGCTCTACAGCCTGGTCTTGCGCAGATATGGGAGGATATATTGGGATTTGAGAATGCTGAGTTTTACATCAAAAGGTGGCCTCAGTTGGATGGTCTTCGTTTCGAAAATGTGCTCATTTCATTTCCTGATGCAATTCCCTGTGGAATCAAGGTTGCCGCAGATGGTGGAAAGATAAATTTAAATCCCGATGATAAATATGTTATGAAAGAAGGGGATGAAGTTCTTGTTATAGCTGAAGATGACGACACTTATGCTCCATCTGCCTTTCCAGAGGTATGTGCTGGCCTTTGTCCAAACACTGTTGAACCTCCCAAATACCCTGAGAAGATATTGTTCTGTGGCTGGCGTCGTGACATAGACGATATGATACTGGTTCTAGAGGCATTCTTGCCTCTAGGTTCAGAACTTTGGATGTTCAATGAGGTTCCAGAAAAAGAAAGAGAGAAGAAACTTACAGATGGTGGACTTGATATTTCGCGATTGGAGAACATAAAACTTGTTCACAAAGAAGGAAATGCTGTGATAAGACGGCATCTAGAGAGTCTTCCCTTGGAGACTTTTGATTCTATATTAATTCTTGCAGATGAATCACTAGAGGACTCTGTTGTGCATTCTGACTCGAGATCCCTTGCCACTCTTCTCCTTATACGAGATATACAGTCAAAGCGTCTTCCTTACAAAGAAACAAAGTCAACTTCCTCATCTGCATTTTCGCATAGCTCTTGGATTCGTGAAATGCAGCAAGCTTCAGATAAATCGATAATTATAAGTGAAATTCTGGATTCTAGGACTAGAAACCTGGTCTCTGTTTCCAGAATCAGTGATTATGTGCTGTCAAATGAACTGGTTAGTATGGCACTGGCAATGGTGGCTGAAGATAAGCAAATCAATCGCGTTCTTGAGGAGCTATTTGCGGAGGAGGGGAATGAGATGTGCATAAAACCGGCTGAACTCTATTTATATGACCAGGAAGAGCTCTGCTTTTATGATATAATGCTTAGGGGTCGTCAAAGGCGGGAAGTTGTGATTGGATATCGCCTTGCAAATGCAGAGCGGGCCGTAATCAATCCATCACTGAAATCAGCAGTACGGAAATGGTCTCACGATGATGTTTTTGTGGTCATCTCCATAAGTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Castor_Poll_mid

Protein Analysis

676

Amino Acids

75.24

Weight (kDa)

5.06

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Slo-like_RCK PF22614 144 - 248 1.6e-07 Calcium-activated potassium channel slowpoke-like RCK domain
Castor_Poll_mid PF06241 287 - 384 1.4e-42 Castor and Pollux, part of voltage-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1658
Acc16I TGCGCA 1 cut(s) 912
AccBSI CCGCTC 1 cut(s) 1945
AccII CGCG 3 cut(s) 670, 1369, 1785
AciI CCGC 5 cut(s) 874, 1047, 1805, 1906, 1945
AclWI GGATC 1 cut(s) 1509
AcsI RAATTY 3 cut(s) 581, 1066, 1665
AcuI CTGAAG 4 cut(s) 252, 1146, 1623, 1785
AcvI CACGTG 1 cut(s) 722
AcyI GRCGYC 1 cut(s) 1237
AfaI GTAC 4 cut(s) 17, 531, 598, 1980
AfiI CCNNNNNNNGG 2 cut(s) 649, 751
AflIII ACRYGT 1 cut(s) 775
AgsI TTSAA 6 cut(s) 91, 428, 581, 845, 1196, 1309
AjnI CCWGG 4 cut(s) 798, 901, 1689, 1857
AjuI GAANNNNNNNTTGG 4 cut(s) 295, 327, 1902, 1934
AleI CACNNNNGTG 1 cut(s) 752
AluBI AGCT 9 cut(s) 225, 236, 487, 823, 1124, 1611, 1637, 1798, 1867
AluI AGCT 9 cut(s) 225, 236, 487, 823, 1124, 1611, 1637, 1798, 1867
Alw21I GWGCWC 4 cut(s) 727, 895, 1005, 1869
Alw26I GTCTC 6 cut(s) 322, 537, 658, 1439, 1699, 1995
AlwI GGATC 1 cut(s) 1509
Ama87I CYCGRG 1 cut(s) 1510
AoxI GGCC 4 cut(s) 299, 968, 1174, 1947
ApeKI GCWGC 2 cut(s) 484, 1630
ApoI RAATTY 3 cut(s) 581, 1066, 1665
AseI ATTAAT 1 cut(s) 1463
AspLEI GCGC 2 cut(s) 670, 913
AspS9I GGNCC 2 cut(s) 299, 1947
AsuHPI GGTGA 1 cut(s) 766
AsuII TTCGAA 2 cut(s) 662, 993
AvaI CYCGRG 1 cut(s) 1510
BaeI ACNNNNGTAYC 2 cut(s) 588, 621
BanII GRGCYC 1 cut(s) 1869
BbrPI CACGTG 1 cut(s) 722
BbsI GAAGAC 3 cut(s) 977, 1427, 1553
Bbv12I GWGCWC 4 cut(s) 727, 895, 1005, 1869
BbvI GCAGC 2 cut(s) 496, 1642
BccI CCATC 6 cut(s) 447, 974, 1046, 1156, 1343, 1969
BceAI ACGGC 2 cut(s) 1436, 1934
BcgI CGANNNNNNTGC 4 cut(s) 1124, 1158, 1763, 1797
BciT130I CCWGG 4 cut(s) 800, 903, 1691, 1859
BcoDI GTCTC 6 cut(s) 322, 537, 658, 1439, 1699, 1995
BfaI CTAG 6 cut(s) 1268, 1286, 1427, 1484, 1677, 1683
BfmI CTRYAG 2 cut(s) 492, 896
BisI GCNGC 3 cut(s) 485, 1047, 1631
BlsI GCNGC 3 cut(s) 486, 1048, 1632
Bme1390I CCNGG 4 cut(s) 800, 903, 1691, 1859
BmeT110I CYCGRG 1 cut(s) 1510
BmgT120I GGNCC 2 cut(s) 299, 1947
BmiI GGNNCC 3 cut(s) 84, 434, 1317
BmrFI CCNGG 4 cut(s) 800, 903, 1691, 1859
BmrI ACTGGG 2 cut(s) 476, 759
BmsI GCATC 6 cut(s) 345, 364, 698, 706, 1009, 1432
BmuI ACTGGG 2 cut(s) 476, 759
BpiI GAAGAC 3 cut(s) 977, 1427, 1553
BplI GAGNNNNNCTC 2 cut(s) 822, 854
Bpu10I CCTNAGC 1 cut(s) 1889
Bpu14I TTCGAA 2 cut(s) 662, 993
BpuEI CTTGAG 2 cut(s) 464, 1811
Bsa29I ATCGAT 1 cut(s) 1649
BsaAI YACGTR 1 cut(s) 722
BsaHI GRCGYC 1 cut(s) 1237
BsaI GGTCTC 3 cut(s) 658, 1699, 1995
BsaJI CCNNGG 2 cut(s) 302, 1440
BsaXI ACNNNNNCTCC 2 cut(s) 1129, 1159
Bsc4I CCNNNNNNNGG 2 cut(s) 649, 751
Bse118I RCCGGY 1 cut(s) 1834
Bse1I ACTGG 6 cut(s) 201, 471, 754, 1266, 1740, 1755
Bse3DI GCAATG 1 cut(s) 1761
BseBI CCWGG 4 cut(s) 800, 903, 1691, 1859
BseCI ATCGAT 1 cut(s) 1649
BseDI CCNNGG 2 cut(s) 302, 1440
BseGI GGATG 5 cut(s) 121, 458, 985, 1111, 1308
BseLI CCNNNNNNNGG 2 cut(s) 649, 751
BseMI GCAATG 1 cut(s) 1761
BseMII CTCAG 5 cut(s) 669, 719, 939, 986, 1203
BseNI ACTGG 6 cut(s) 201, 471, 754, 1266, 1740, 1755
BseRI GAGGAG 3 cut(s) 846, 1808, 1823
BseXI GCAGC 2 cut(s) 496, 1642
Bsh1236I CGCG 3 cut(s) 670, 1369, 1785
BshFI GGCC 4 cut(s) 301, 970, 1176, 1949
BshVI ATCGAT 1 cut(s) 1649
BsiHKAI GWGCWC 4 cut(s) 727, 895, 1005, 1869
BsiHKCI CYCGRG 1 cut(s) 1510
BsiSI CCGG 1 cut(s) 1835
BslFI GGGAC 1 cut(s) 786
BslI CCNNNNNNNGG 2 cut(s) 649, 751
BsmAI GTCTC 6 cut(s) 322, 537, 658, 1439, 1699, 1995
BsmFI GGGAC 1 cut(s) 786
BsmI GAATGC 3 cut(s) 949, 1274, 1501
BsnI GGCC 4 cut(s) 301, 970, 1176, 1949
Bso31I GGTCTC 3 cut(s) 658, 1699, 1995
BsoBI CYCGRG 1 cut(s) 1510
Bsp119I TTCGAA 2 cut(s) 662, 993
Bsp1286I GDGCHC 4 cut(s) 727, 895, 1005, 1869
Bsp1407I TGTACA 1 cut(s) 15
Bsp143I GATC 2 cut(s) 706, 1514
Bsp68I TCGCGA 1 cut(s) 1369
BspACI CCGC 5 cut(s) 874, 1047, 1805, 1906, 1945
BspANI GGCC 4 cut(s) 301, 970, 1176, 1949
BspCNI CTCAG 5 cut(s) 668, 720, 940, 985, 1204
BspDI ATCGAT 1 cut(s) 1649
BspFNI CGCG 3 cut(s) 670, 1369, 1785
BspLI GGNNCC 3 cut(s) 84, 434, 1317
BspPI GGATC 1 cut(s) 1509
BspQI GCTCTTC 1 cut(s) 1857
BspT104I TTCGAA 2 cut(s) 662, 993
BspTNI GGTCTC 3 cut(s) 658, 1699, 1995
BsrBI CCGCTC 1 cut(s) 1945
BsrDI GCAATG 1 cut(s) 1761
BsrFI RCCGGY 1 cut(s) 1834
BsrGI TGTACA 1 cut(s) 15
BsrI ACTGG 6 cut(s) 201, 471, 754, 1266, 1740, 1755
BssAI RCCGGY 1 cut(s) 1834
BssECI CCNNGG 2 cut(s) 302, 1440
BssMI GATC 2 cut(s) 706, 1514
BssNI GRCGYC 1 cut(s) 1237
BssT1I CCWWGG 2 cut(s) 302, 1440
Bst2UI CCWGG 4 cut(s) 800, 903, 1691, 1859
Bst4CI ACNGT 4 cut(s) 850, 888, 1192, 1551
Bst6I CTCTTC 4 cut(s) 89, 407, 1533, 1857
BstACI GRCGYC 1 cut(s) 1237
BstAPI GCANNNNNTGC 1 cut(s) 206
BstAUI TGTACA 1 cut(s) 15
BstBAI YACGTR 1 cut(s) 722
BstBI TTCGAA 2 cut(s) 662, 993
BstC8I GCNNGC 7 cut(s) 338, 489, 672, 1174, 1235, 1635, 1947
BstDEI CTNAG 8 cut(s) 401, 655, 728, 740, 948, 972, 1212, 1889
BstENI CCTNNNNNAGG 1 cut(s) 647
BstF5I GGATG 5 cut(s) 121, 458, 985, 1111, 1308
BstFNI CGCG 3 cut(s) 670, 1369, 1785
BstHHI GCGC 2 cut(s) 670, 913
BstKTI GATC 2 cut(s) 709, 1517
BstMAI GTCTC 6 cut(s) 322, 537, 658, 1439, 1699, 1995
BstMBI GATC 2 cut(s) 706, 1514
BstMWI GCNNNNNNNGC 7 cut(s) 10, 206, 481, 618, 1151, 1760, 1946
BstNI CCWGG 4 cut(s) 800, 903, 1691, 1859
BstNSI RCATGY 2 cut(s) 340, 779
BstSCI CCNGG 4 cut(s) 798, 901, 1689, 1857
BstSFI CTRYAG 2 cut(s) 492, 896
BstUI CGCG 3 cut(s) 670, 1369, 1785
BstV1I GCAGC 2 cut(s) 496, 1642
BstV2I GAAGAC 3 cut(s) 977, 1427, 1553
BstX2I RGATCY 1 cut(s) 1514
BstYI RGATCY 1 cut(s) 1514
Bsu15I ATCGAT 1 cut(s) 1649
BsuRI GGCC 4 cut(s) 301, 970, 1176, 1949
BsuTUI ATCGAT 1 cut(s) 1649
BtgZI GCGATG 1 cut(s) 365
BtsCI GGATG 5 cut(s) 121, 458, 985, 1111, 1308
BtsIMutI CAGTG 6 cut(s) 747, 893, 1188, 1717, 1748, 1964
BtuMI TCGCGA 1 cut(s) 1369
Cac8I GCNNGC 7 cut(s) 338, 489, 672, 1174, 1235, 1635, 1947
CfoI GCGC 2 cut(s) 670, 913
Cfr10I RCCGGY 1 cut(s) 1834
Cfr13I GGNCC 2 cut(s) 299, 1947
ClaI ATCGAT 1 cut(s) 1649
CseI GACGC 2 cut(s) 1226, 1547
CsiI ACCWGGT 1 cut(s) 1689
Csp6I GTAC 4 cut(s) 16, 530, 597, 1979
CviAII CATG 6 cut(s) 249, 278, 337, 592, 776, 860
CviQI GTAC 4 cut(s) 16, 530, 597, 1979
DdeI CTNAG 8 cut(s) 401, 655, 728, 740, 948, 972, 1212, 1889
DpnI GATC 2 cut(s) 708, 1516
DpnII GATC 2 cut(s) 706, 1514
DraI TTTAAA 1 cut(s) 1071
Eam1104I CTCTTC 4 cut(s) 89, 407, 1533, 1857
EarI CTCTTC 4 cut(s) 89, 407, 1533, 1857
Ecl136II GAGCTC 1 cut(s) 1867
Eco130I CCWWGG 2 cut(s) 302, 1440
Eco24I GRGCYC 1 cut(s) 1869
Eco31I GGTCTC 3 cut(s) 658, 1699, 1995
Eco32I GATATC 1 cut(s) 1925
Eco53kI GAGCTC 1 cut(s) 1867
Eco57I CTGAAG 4 cut(s) 252, 1146, 1623, 1785
Eco72I CACGTG 1 cut(s) 722
Eco88I CYCGRG 1 cut(s) 1510
EcoICRI GAGCTC 1 cut(s) 1867
EcoNI CCTNNNNNAGG 1 cut(s) 647
EcoRII CCWGG 4 cut(s) 798, 901, 1689, 1857
EcoRV GATATC 1 cut(s) 1925
EcoT14I CCWWGG 2 cut(s) 302, 1440
EcoT38I GRGCYC 1 cut(s) 1869
ErhI CCWWGG 2 cut(s) 302, 1440
FaeI CATG 6 cut(s) 252, 281, 340, 595, 779, 863
FaqI GGGAC 1 cut(s) 786
FatI CATG 6 cut(s) 248, 277, 336, 591, 775, 859
FauI CCCGC 2 cut(s) 1899, 1938
FauNDI CATATG 1 cut(s) 139
Fnu4HI GCNGC 3 cut(s) 485, 1047, 1631
FokI GGATG 5 cut(s) 128, 465, 992, 1118, 1315
FriOI GRGCYC 1 cut(s) 1869
Fsp4HI GCNGC 3 cut(s) 485, 1047, 1631
FspBI CTAG 6 cut(s) 1268, 1286, 1427, 1484, 1677, 1683
FspI TGCGCA 1 cut(s) 912
GlaI GCGC 2 cut(s) 669, 912
GluI GCNGC 3 cut(s) 485, 1047, 1631
HaeIII GGCC 4 cut(s) 301, 970, 1176, 1949
HapII CCGG 1 cut(s) 1835
HgaI GACGC 2 cut(s) 1226, 1547
HhaI GCGC 2 cut(s) 670, 913
Hin1I GRCGYC 1 cut(s) 1237
Hin1II CATG 6 cut(s) 252, 281, 340, 595, 779, 863
Hin6I GCGC 2 cut(s) 668, 911
HinP1I GCGC 2 cut(s) 668, 911
HincII GTYRAC 2 cut(s) 394, 1584
HindII GTYRAC 2 cut(s) 394, 1584
HindIII AAGCTT 2 cut(s) 821, 1635
HpaII CCGG 1 cut(s) 1835
HphI GGTGA 1 cut(s) 766
Hpy166II GTNNAC 5 cut(s) 194, 394, 1355, 1393, 1584
Hpy188I TCNGA 8 cut(s) 373, 385, 694, 711, 729, 1294, 1507, 1642
Hpy8I GTNNAC 5 cut(s) 194, 394, 1355, 1393, 1584
Hpy99I CGWCG 1 cut(s) 1242
HpyAV CCTTC 5 cut(s) 382, 643, 658, 1094, 1394
HpyCH4III ACNGT 4 cut(s) 850, 888, 1192, 1551
HpyCH4IV ACGT 2 cut(s) 599, 721
HpyF10VI GCNNNNNNNGC 7 cut(s) 10, 206, 481, 618, 1151, 1760, 1946
HpyF3I CTNAG 8 cut(s) 401, 655, 728, 740, 948, 972, 1212, 1889
HpySE526I ACGT 2 cut(s) 599, 721
Hsp92I GRCGYC 1 cut(s) 1237
Hsp92II CATG 6 cut(s) 252, 281, 340, 595, 779, 863
HspAI GCGC 2 cut(s) 668, 911
Kzo9I GATC 2 cut(s) 706, 1514
LguI GCTCTTC 1 cut(s) 1857
LmnI GCTCC 2 cut(s) 1150, 1795
Lsp1109I GCAGC 2 cut(s) 496, 1642
LweI GCATC 6 cut(s) 345, 364, 698, 706, 1009, 1432
MabI ACCWGGT 1 cut(s) 1689
MaeI CTAG 6 cut(s) 1268, 1286, 1427, 1484, 1677, 1683
MaeII ACGT 2 cut(s) 599, 721
MaeIII GTNAC 2 cut(s) 794, 1241
MalI GATC 2 cut(s) 708, 1516
MbiI CCGCTC 1 cut(s) 1945
MboI GATC 2 cut(s) 706, 1514
MflI RGATCY 1 cut(s) 1514
MhlI GDGCHC 4 cut(s) 727, 895, 1005, 1869
MluCI AATT 6 cut(s) 581, 1023, 1066, 1464, 1653, 1665
MlyI GAGTC 4 cut(s) 389, 1441, 1484, 1502
MmeI TCCRAC 2 cut(s) 808, 957
MseI TTAA 3 cut(s) 878, 1070, 1463
MslI CAYNNNNRTG 2 cut(s) 752, 1998
MspI CCGG 1 cut(s) 1835
MspR9I CCNGG 4 cut(s) 800, 903, 1691, 1859
Mva1269I GAATGC 3 cut(s) 949, 1274, 1501
MvaI CCWGG 4 cut(s) 800, 903, 1691, 1859
MvnI CGCG 3 cut(s) 670, 1369, 1785
MwoI GCNNNNNNNGC 7 cut(s) 10, 206, 481, 618, 1151, 1760, 1946
NdeI CATATG 1 cut(s) 139
NdeII GATC 2 cut(s) 706, 1514
NlaIII CATG 6 cut(s) 252, 281, 340, 595, 779, 863
NlaIV GGNNCC 3 cut(s) 84, 434, 1317
NmuCI GTSAC 2 cut(s) 794, 1241
NruI TCGCGA 1 cut(s) 1369
NsbI TGCGCA 1 cut(s) 912
NspI RCATGY 2 cut(s) 340, 779
NspV TTCGAA 2 cut(s) 662, 993
OliI CACNNNNGTG 1 cut(s) 752
PaeI GCATGC 1 cut(s) 340
PaeR7I CTCGAG 1 cut(s) 1510
PciI ACATGT 1 cut(s) 775
PciSI GCTCTTC 1 cut(s) 1857
PctI GAATGC 3 cut(s) 949, 1274, 1501
PfeI GAWTC 7 cut(s) 266, 1035, 1454, 1478, 1618, 1673, 1707
PkrI GCNGC 3 cut(s) 486, 1048, 1632
PleI GAGTC 4 cut(s) 389, 1440, 1484, 1502
PmaCI CACGTG 1 cut(s) 722
PmlI CACGTG 1 cut(s) 722
PpsI GAGTC 4 cut(s) 389, 1440, 1484, 1502
Ppu21I YACGTR 1 cut(s) 722
PscI ACATGT 1 cut(s) 775
PshBI ATTAAT 1 cut(s) 1463
PsiI TTATAA 1 cut(s) 1658
Psp124BI GAGCTC 1 cut(s) 1869
Psp6I CCWGG 4 cut(s) 798, 901, 1689, 1857
PspCI CACGTG 1 cut(s) 722
PspGI CCWGG 4 cut(s) 798, 901, 1689, 1857
PspN4I GGNNCC 3 cut(s) 84, 434, 1317
PspPI GGNCC 2 cut(s) 299, 1947
PsuI RGATCY 1 cut(s) 1514
RruI TCGCGA 1 cut(s) 1369
RsaI GTAC 4 cut(s) 17, 531, 598, 1980
RsaNI GTAC 4 cut(s) 16, 530, 597, 1979
RseI CAYNNNNRTG 2 cut(s) 752, 1998
SacI GAGCTC 1 cut(s) 1869
SapI GCTCTTC 1 cut(s) 1857
SaqAI TTAA 3 cut(s) 878, 1070, 1463
SatI GCNGC 3 cut(s) 485, 1047, 1631
Sau3AI GATC 2 cut(s) 706, 1514
Sau96I GGNCC 2 cut(s) 299, 1947
SchI GAGTC 4 cut(s) 389, 1441, 1484, 1502
ScrFI CCNGG 4 cut(s) 800, 903, 1691, 1859
SduI GDGCHC 4 cut(s) 727, 895, 1005, 1869
SexAI ACCWGGT 1 cut(s) 1689
SfaNI GCATC 6 cut(s) 345, 364, 698, 706, 1009, 1432
SfcI CTRYAG 2 cut(s) 492, 896
Sfr274I CTCGAG 1 cut(s) 1510
SfuI TTCGAA 2 cut(s) 662, 993
SlaI CTCGAG 1 cut(s) 1510
SmiI ATTTAAAT 1 cut(s) 1071
SmiMI CAYNNNNRTG 2 cut(s) 752, 1998
SmlI CTYRAG 3 cut(s) 479, 1510, 1790
SmoI CTYRAG 3 cut(s) 479, 1510, 1790
SphI GCATGC 1 cut(s) 340
Sse9I AATT 6 cut(s) 581, 1023, 1066, 1464, 1653, 1665
SsiI CCGC 5 cut(s) 874, 1047, 1805, 1906, 1945
SspI AATATT 1 cut(s) 174
SspMI CTAG 6 cut(s) 1268, 1286, 1427, 1484, 1677, 1683
SstI GAGCTC 1 cut(s) 1869
StyD4I CCNGG 4 cut(s) 798, 901, 1689, 1857
StyI CCWWGG 2 cut(s) 302, 1440
SwaI ATTTAAAT 1 cut(s) 1071
TaaI ACNGT 4 cut(s) 850, 888, 1192, 1551
TaiI ACGT 2 cut(s) 602, 724
TaqI TCGA 4 cut(s) 662, 993, 1511, 1649
TasI AATT 6 cut(s) 581, 1023, 1066, 1464, 1653, 1665
TatI WGTACW 2 cut(s) 15, 529
TauI GCSGC 1 cut(s) 1049
TfiI GAWTC 7 cut(s) 266, 1035, 1454, 1478, 1618, 1673, 1707
Tru1I TTAA 3 cut(s) 878, 1070, 1463
Tru9I TTAA 3 cut(s) 878, 1070, 1463
TscAI CASTG 6 cut(s) 754, 893, 1195, 1717, 1755, 1971
TseFI GTSAC 2 cut(s) 794, 1241
TseI GCWGC 2 cut(s) 484, 1630
Tsp45I GTSAC 2 cut(s) 794, 1241
TspDTI ATGAA 8 cut(s) 237, 580, 711, 999, 1109, 1122, 1491, 1746
TspGWI ACGGA 1 cut(s) 1996
TspRI CASTG 6 cut(s) 754, 893, 1195, 1717, 1755, 1971
VspI ATTAAT 1 cut(s) 1463
XagI CCTNNNNNAGG 1 cut(s) 647
XapI RAATTY 3 cut(s) 581, 1066, 1665
XbaI TCTAGA 2 cut(s) 1267, 1426
XceI RCATGY 2 cut(s) 340, 779
XhoI CTCGAG 1 cut(s) 1510
XspI CTAG 6 cut(s) 1268, 1286, 1427, 1484, 1677, 1683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.