Rh7DG334100

Ion channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
41204093 .. 41214546
10454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG334100.1

Sequence Viewer

Length: 2706 bp
ATGCTTGATCGCAATGAAGAGTCGTCGAAGCCCGACAAGCCGGAAAGCCCACCGCAGCTGAAGAAATCACGGACTATAAGCGGCGACGATGCAACCCCAATCTTCCCGGGCCCACTGTTCCCAGCCGTTCGACGCATCTCCACCATTCCTTCCTCCCGCAACTGGCCCCCGCCCGATCGCCACGCGCCGACTAGTGCGGCGGACCACCGCGACTTCTCTGACCGTGACTGGGTCTTTCCGTCCTTTGTGCTTCCACAGAATCCTTCCAAACGAAGCAGCAAGAAACACGCCTCCGATGCATCCACCGCTTCTCAGCTTGCGGGGGCCACCGAAGCTGCTGCTGAGAGGAAGAAAATTAAGTTGGTGCCCCAGCCCGGACGTGAAGCACCTTCAACGAGCGAGTTGGCTCGCCCGAGTTCCAGGACCCGGGCTCGAGATTTGAAACCTTATTTGTTGCTATTATCTTTGCTCACTTTCATTTGTATATTATCTGTACCTTATGCAGTTTATCTGCGGCAAAGAATTGTAAAACTTGAGGAATGTTGTATCAATAAAAATGTTGGTACAGATGACAATATTGAGGCTTCACTGTCTGAGAAGAATCCAACAATTTTGCGTTTTCCTAATGCCGAAAGAAGAACTCTTGTTTTGTATTCTGTGGTCTTTACACTGGCCATGCCATTTGCGCTGTACAAACATCTTGATTATTTTTCCCATTTGACAATCCTCTCAAAAAACAAGAATAACAAAGAGGGGGTTCCCTTGAAGAAGAGGATAGCCTATATAGTGGATGTGTGCTTTTCTGTATATCCATATGCTAAACTACTTGCACTTCTCTTTGCAACAATATTACTAATAGGGTTTGGTGGACTGGCATTGTATGCAGTCAATAAAAATAGCTTTGCTGAAGCTCTTTGGCTTTCATGGACTTTTGTTGCTGATTCTGGAAACCATGCTGATACAGAGGGCATTGGGCCAAGGATAGTTTCTGTCTCTATTAGTTCAGGAGGCATGCTTATATTTGCGATGATGCTTGGGCTTGTTTCTGATGCTATATCAGAGAAGGTTGACTCACTAAGGAAAGGGAAGAGTGAAGTCATTGAAAGGAACCACATACTCGTTCTTGGATGGAGTGATAAACTGGGTTCGCTTCTCAAGCAGCTTGCTATAGCAAACAAGAGTGTTGGTGGTGGTGTTGTTGTTGTACTTGCTGAAAGAGACAAGGAGGAAATGGAGATAGATATTGCAAAACTTGAATTTGATTTCATGGGTATGTCTGTTATATGCAGAAGTGGCAGTCCTCTTATACTTGCTGACCTAAAGAAGGTCTCAGTTTCGAAGGCGCGTGCTATCATTGTATTGGCATCTGATGAAAATGCAGATCAGAGTGATGCACGTGCTCTGAGGGTTGTTCTAAGCCTCACTGGGGTGAAAGAGGGTTTGAGGGGACATGTTGTTGTAGAGATGAGTGACCTGGATAATGAGCCTCTTGTGAAGCTTGTTGGAGGAGAACTCATTGAAACAGTAGTAGCACATGATGTGATTGGGCGGTTAATGATACAGTGTGCTCTACAGCCTGGTCTTGCGCAGATATGGGAGGATATATTGGGATTTGAGAATGCTGAGTTTTACATCAAAAGGTGGCCTCAGTTGGATGGTCTTCGTTTCGAAAATGTGCTCATTTCATTTCCTGATGCAATTCCCTGTGGAATCAAGGTTGCCGCAGATGGTGGAAAGATAAATTTAAATCCCGATGATAAATATGTTATGAAAGAAGGGGATGAAGTTCTTGTTATAGCTGAAGATGACGACACTTATGCTCCATCTGCCTTTCCAGAGGTATGTGCTGGCCTTTGTCCAAACACTGTTGAACCTCCCAAATACCCTGAGAAGATATTGTTCTGTGGCTGGCGTCGTGACATAGACGATATGATACTGGTTCTAGAGGCATTCTTGCCTCTAGGTTCAGAACTTTGGATGTTCAATGAGGTTCCAGAAAAAGAAAGAGAGAAGAAACTTACAGATGGTGGACTTGATATTTCGCGATTGGAGAACATAAAACTTGTTCACAAAGAAGGAAATGCTGTGATAAGACGGCATCTAGAGAGTCTTCCCTTGGAGACTTTTGATTCTATATTAATTCTTGCAGATGAATCACTAGAGGACTCTGTTGTGCATTCTGACTCGAGATCCCTTGCCACTCTTCTCCTTATACGAGATATACAGTCAAAGCGTCTTCCTTACAAAGAAACAAAGTCAACTTCCTCATCTGCATTTTCGCATAGCTCTTGGATTCGTGAAATGCAGCAAGCTTCAGATAAATCGATAATTATAAGTGAAATTCTGGATTCTAGGACTAGAAACCTGGTCTCTGTTTCCAGAATCAGTGATTATGTGCTGTCAAATGAACTGGTTAGTATGGCACTGGCAATGGTGGCTGAAGATAAGCAAATCAATCGCGTTCTTGAGGAGCTATTTGCGGAGGAGGGGAATGAGATGTGCATAAAACCGGCTGAACTCTATTTATATGACCAGGAAGAGCTCTGCTTTTATGATATAATGCTTAGGGGTCGTCAAAGGCGGGAAGTTGTGATTGGATATCGCCTTGCAAATGCAGAGCGGGCCGTAATCAATCCATCACTGAAATCAGCAGTACGGAAATGGTCTCACGATGATGTTTTTGTGGTCATCTCCATAAGTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

901

Amino Acids

100.25

Weight (kDa)

5.6

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Slo-like_RCK PF22614 369 - 473 3.9e-07 Calcium-activated potassium channel slowpoke-like RCK domain
Castor_Poll_mid PF06241 512 - 609 2.1e-42 Castor and Pollux, part of voltage-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2333
Acc16I TGCGCA 1 cut(s) 1587
AccB1I GGYRCC 1 cut(s) 364
AccBSI CCGCTC 1 cut(s) 2620
AccII CGCG 5 cut(s) 185, 210, 1345, 2044, 2460
AclWI GGATC 1 cut(s) 2184
AcoI YGGCCR 1 cut(s) 672
AcsI RAATTY 3 cut(s) 1256, 1741, 2340
AcuI CTGAAG 5 cut(s) 80, 927, 1821, 2298, 2460
AcvI CACGTG 1 cut(s) 1397
AcyI GRCGYC 1 cut(s) 1912
AfaI GTAC 5 cut(s) 495, 565, 692, 1206, 2655
AfiI CCNNNNNNNGG 6 cut(s) 162, 229, 374, 426, 1324, 1426
AflIII ACRYGT 1 cut(s) 1450
AgsI TTSAA 8 cut(s) 393, 442, 766, 1103, 1256, 1520, 1871, 1984
AhlI ACTAGT 1 cut(s) 191
AjiI CACGTC 1 cut(s) 380
AjnI CCWGG 5 cut(s) 419, 1473, 1576, 2364, 2532
AjuI GAANNNNNNNTTGG 6 cut(s) 344, 376, 970, 1002, 2577, 2609
AleI CACNNNNGTG 1 cut(s) 1427
Alw21I GWGCWC 4 cut(s) 1402, 1570, 1680, 2544
Alw26I GTCTC 6 cut(s) 997, 1212, 1333, 2114, 2374, 2670
AlwI GGATC 1 cut(s) 2184
Ama87I CYCGRG 5 cut(s) 106, 412, 426, 432, 2185
AoxI GGCC 8 cut(s) 109, 164, 324, 672, 974, 1643, 1849, 2622
ApaI GGGCCC 1 cut(s) 113
ApeKI GCWGC 6 cut(s) 55, 276, 335, 338, 1159, 2305
ApoI RAATTY 3 cut(s) 1256, 1741, 2340
AseI ATTAAT 1 cut(s) 2138
AspLEI GCGC 4 cut(s) 187, 688, 1345, 1588
AspS9I GGNCC 8 cut(s) 109, 110, 165, 202, 324, 423, 974, 2622
AsuC2I CCSGG 5 cut(s) 107, 108, 375, 427, 428
AsuHPI GGTGA 1 cut(s) 1441
AsuII TTCGAA 2 cut(s) 1337, 1668
AvaI CYCGRG 5 cut(s) 106, 412, 426, 432, 2185
AvaII GGWCC 2 cut(s) 202, 423
BaeGI GKGCMC 2 cut(s) 113, 369
BalI TGGCCA 1 cut(s) 674
BanI GGYRCC 1 cut(s) 364
BanII GRGCYC 3 cut(s) 113, 433, 2544
BbrPI CACGTG 1 cut(s) 1397
BbsI GAAGAC 3 cut(s) 1652, 2102, 2228
Bbv12I GWGCWC 4 cut(s) 1402, 1570, 1680, 2544
BbvI GCAGC 6 cut(s) 67, 288, 322, 325, 1171, 2317
BccI CCATC 6 cut(s) 1122, 1649, 1721, 1831, 2018, 2644
BceAI ACGGC 3 cut(s) 110, 2111, 2609
BcgI CGANNNNNNTGC 6 cut(s) 320, 354, 1799, 1833, 2438, 2472
BciT130I CCWGG 5 cut(s) 421, 1475, 1578, 2366, 2534
BcnI CCSGG 5 cut(s) 107, 108, 375, 427, 428
BcoDI GTCTC 6 cut(s) 997, 1212, 1333, 2114, 2374, 2670
BcuI ACTAGT 1 cut(s) 191
BfaI CTAG 7 cut(s) 192, 1943, 1961, 2102, 2159, 2352, 2358
BfmI CTRYAG 2 cut(s) 1167, 1571
Bme18I GGWCC 2 cut(s) 202, 423
BmeT110I CYCGRG 5 cut(s) 106, 412, 426, 432, 2185
BmgBI CACGTC 1 cut(s) 380
BmgT120I GGNCC 8 cut(s) 109, 110, 165, 202, 324, 423, 974, 2622
BmiI GGNNCC 8 cut(s) 111, 167, 325, 366, 425, 759, 1109, 1992
BmrI ACTGGG 3 cut(s) 238, 1151, 1434
BmuI ACTGGG 3 cut(s) 238, 1151, 1434
BpiI GAAGAC 3 cut(s) 1652, 2102, 2228
BplI GAGNNNNNCTC 2 cut(s) 1497, 1529
Bpu10I CCTNAGC 1 cut(s) 2564
Bpu14I TTCGAA 2 cut(s) 1337, 1668
BpuEI CTTGAG 3 cut(s) 554, 1139, 2486
BpuMI CCSGG 5 cut(s) 107, 108, 375, 427, 428
Bsa29I ATCGAT 1 cut(s) 2324
BsaAI YACGTR 1 cut(s) 1397
BsaHI GRCGYC 1 cut(s) 1912
BsaI GGTCTC 3 cut(s) 1333, 2374, 2670
BsaJI CCNNGG 4 cut(s) 106, 426, 977, 2115
BsaXI ACNNNNNCTCC 2 cut(s) 1804, 1834
Bsc4I CCNNNNNNNGG 6 cut(s) 162, 229, 374, 426, 1324, 1426
Bse118I RCCGGY 1 cut(s) 2509
Bse1I ACTGG 9 cut(s) 167, 233, 675, 876, 1146, 1429, 1941, 2415, 2430
Bse3DI GCAATG 2 cut(s) 19, 2436
BseBI CCWGG 5 cut(s) 421, 1475, 1578, 2366, 2534
BseCI ATCGAT 1 cut(s) 2324
BseDI CCNNGG 4 cut(s) 106, 426, 977, 2115
BseGI GGATG 6 cut(s) 299, 796, 1133, 1660, 1786, 1983
BseLI CCNNNNNNNGG 6 cut(s) 162, 229, 374, 426, 1324, 1426
BseMI GCAATG 2 cut(s) 19, 2436
BseMII CTCAG 8 cut(s) 326, 333, 585, 1344, 1394, 1614, 1661, 1878
BseNI ACTGG 9 cut(s) 167, 233, 675, 876, 1146, 1429, 1941, 2415, 2430
BseRI GAGGAG 3 cut(s) 1521, 2483, 2498
BseSI GKGCMC 2 cut(s) 113, 369
BseXI GCAGC 6 cut(s) 67, 288, 322, 325, 1171, 2317
BseYI CCCAGC 2 cut(s) 121, 369
Bsh1236I CGCG 5 cut(s) 185, 210, 1345, 2044, 2460
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 8 cut(s) 111, 166, 326, 674, 976, 1645, 1851, 2624
BshNI GGYRCC 1 cut(s) 364
BshVI ATCGAT 1 cut(s) 2324
BsiEI CGRYCG 1 cut(s) 178
BsiHKAI GWGCWC 4 cut(s) 1402, 1570, 1680, 2544
BsiHKCI CYCGRG 5 cut(s) 106, 412, 426, 432, 2185
BsiSI CCGG 5 cut(s) 41, 107, 375, 427, 2510
BslFI GGGAC 1 cut(s) 1461
BslI CCNNNNNNNGG 6 cut(s) 162, 229, 374, 426, 1324, 1426
BsmAI GTCTC 6 cut(s) 997, 1212, 1333, 2114, 2374, 2670
BsmFI GGGAC 1 cut(s) 1461
BsmI GAATGC 3 cut(s) 1624, 1949, 2176
BsnI GGCC 8 cut(s) 111, 166, 326, 674, 976, 1645, 1851, 2624
Bso31I GGTCTC 3 cut(s) 1333, 2374, 2670
BsoBI CYCGRG 5 cut(s) 106, 412, 426, 432, 2185
Bsp119I TTCGAA 2 cut(s) 1337, 1668
Bsp120I GGGCCC 1 cut(s) 109
Bsp1286I GDGCHC 7 cut(s) 113, 369, 433, 1402, 1570, 1680, 2544
Bsp1407I TGTACA 1 cut(s) 690
Bsp143I GATC 4 cut(s) 7, 175, 1381, 2189
Bsp68I TCGCGA 1 cut(s) 2044
BspANI GGCC 8 cut(s) 111, 166, 326, 674, 976, 1645, 1851, 2624
BspCNI CTCAG 8 cut(s) 325, 334, 586, 1343, 1395, 1615, 1660, 1879
BspDI ATCGAT 1 cut(s) 2324
BspFNI CGCG 5 cut(s) 185, 210, 1345, 2044, 2460
BspLI GGNNCC 8 cut(s) 111, 167, 325, 366, 425, 759, 1109, 1992
BspPI GGATC 1 cut(s) 2184
BspQI GCTCTTC 1 cut(s) 2532
BspT104I TTCGAA 2 cut(s) 1337, 1668
BspT107I GGYRCC 1 cut(s) 364
BspTNI GGTCTC 3 cut(s) 1333, 2374, 2670
BsrBI CCGCTC 1 cut(s) 2620
BsrDI GCAATG 2 cut(s) 19, 2436
BsrFI RCCGGY 1 cut(s) 2509
BsrGI TGTACA 1 cut(s) 690
BsrI ACTGG 9 cut(s) 167, 233, 675, 876, 1146, 1429, 1941, 2415, 2430
BssAI RCCGGY 1 cut(s) 2509
BssECI CCNNGG 4 cut(s) 106, 426, 977, 2115
BssMI GATC 4 cut(s) 7, 175, 1381, 2189
BssNI GRCGYC 1 cut(s) 1912
BssT1I CCWWGG 2 cut(s) 977, 2115
Bst2UI CCWGG 5 cut(s) 421, 1475, 1578, 2366, 2534
Bst4CI ACNGT 7 cut(s) 117, 224, 591, 1525, 1563, 1867, 2226
Bst6I CTCTTC 5 cut(s) 12, 764, 1082, 2208, 2532
BstACI GRCGYC 1 cut(s) 1912
BstAPI GCANNNNNTGC 1 cut(s) 881
BstAUI TGTACA 1 cut(s) 690
BstBAI YACGTR 1 cut(s) 1397
BstBI TTCGAA 2 cut(s) 1337, 1668
BstC8I GCNNGC 9 cut(s) 318, 409, 1013, 1164, 1347, 1849, 1910, 2310, 2622
BstENI CCTNNNNNAGG 1 cut(s) 1322
BstF5I GGATG 6 cut(s) 299, 796, 1133, 1660, 1786, 1983
BstFNI CGCG 5 cut(s) 185, 210, 1345, 2044, 2460
BstHHI GCGC 4 cut(s) 187, 688, 1345, 1588
BstKTI GATC 4 cut(s) 10, 178, 1384, 2192
BstMAI GTCTC 6 cut(s) 997, 1212, 1333, 2114, 2374, 2670
BstMBI GATC 4 cut(s) 7, 175, 1381, 2189
BstMCI CGRYCG 1 cut(s) 178
BstNI CCWGG 5 cut(s) 421, 1475, 1578, 2366, 2534
BstNSI RCATGY 2 cut(s) 1015, 1454
BstSFI CTRYAG 2 cut(s) 1167, 1571
BstSLI GKGCMC 2 cut(s) 113, 369
BstUI CGCG 5 cut(s) 185, 210, 1345, 2044, 2460
BstV1I GCAGC 6 cut(s) 67, 288, 322, 325, 1171, 2317
BstV2I GAAGAC 3 cut(s) 1652, 2102, 2228
BstX2I RGATCY 1 cut(s) 2189
BstYI RGATCY 1 cut(s) 2189
Bsu15I ATCGAT 1 cut(s) 2324
BsuRI GGCC 8 cut(s) 111, 166, 326, 674, 976, 1645, 1851, 2624
BsuTUI ATCGAT 1 cut(s) 2324
BtgZI GCGATG 1 cut(s) 1040
BtrI CACGTC 1 cut(s) 380
BtsCI GGATG 6 cut(s) 299, 796, 1133, 1660, 1786, 1983
BtsIMutI CAGTG 9 cut(s) 113, 587, 668, 1422, 1568, 1863, 2392, 2423, 2639
BtuMI TCGCGA 1 cut(s) 2044
Cac8I GCNNGC 9 cut(s) 318, 409, 1013, 1164, 1347, 1849, 1910, 2310, 2622
CfoI GCGC 4 cut(s) 187, 688, 1345, 1588
Cfr10I RCCGGY 1 cut(s) 2509
Cfr13I GGNCC 8 cut(s) 109, 110, 165, 202, 324, 423, 974, 2622
Cfr9I CCCGGG 2 cut(s) 106, 426
ClaI ATCGAT 1 cut(s) 2324
CseI GACGC 3 cut(s) 141, 1901, 2222
CsiI ACCWGGT 1 cut(s) 2364
Csp6I GTAC 5 cut(s) 494, 564, 691, 1205, 2654
CviAII CATG 7 cut(s) 676, 924, 953, 1012, 1267, 1451, 1535
CviQI GTAC 5 cut(s) 494, 564, 691, 1205, 2654
DpnI GATC 4 cut(s) 9, 177, 1383, 2191
DpnII GATC 4 cut(s) 7, 175, 1381, 2189
DraI TTTAAA 1 cut(s) 1746
EaeI YGGCCR 1 cut(s) 672
Eam1104I CTCTTC 5 cut(s) 12, 764, 1082, 2208, 2532
EarI CTCTTC 5 cut(s) 12, 764, 1082, 2208, 2532
EciI GGCGGA 1 cut(s) 215
Ecl136II GAGCTC 1 cut(s) 2542
Eco130I CCWWGG 2 cut(s) 977, 2115
Eco24I GRGCYC 3 cut(s) 113, 433, 2544
Eco31I GGTCTC 3 cut(s) 1333, 2374, 2670
Eco32I GATATC 1 cut(s) 2600
Eco47I GGWCC 2 cut(s) 202, 423
Eco53kI GAGCTC 1 cut(s) 2542
Eco57I CTGAAG 5 cut(s) 80, 927, 1821, 2298, 2460
Eco72I CACGTG 1 cut(s) 1397
Eco88I CYCGRG 5 cut(s) 106, 412, 426, 432, 2185
EcoICRI GAGCTC 1 cut(s) 2542
EcoNI CCTNNNNNAGG 1 cut(s) 1322
EcoO109I RGGNCCY 1 cut(s) 423
EcoRII CCWGG 5 cut(s) 419, 1473, 1576, 2364, 2532
EcoRV GATATC 1 cut(s) 2600
EcoT14I CCWWGG 2 cut(s) 977, 2115
EcoT22I ATGCAT 1 cut(s) 301
EcoT38I GRGCYC 3 cut(s) 113, 433, 2544
ErhI CCWWGG 2 cut(s) 977, 2115
FaeI CATG 7 cut(s) 679, 927, 956, 1015, 1270, 1454, 1538
FaqI GGGAC 1 cut(s) 1461
FatI CATG 7 cut(s) 675, 923, 952, 1011, 1266, 1450, 1534
FauI CCCGC 5 cut(s) 164, 177, 313, 2574, 2613
FauNDI CATATG 1 cut(s) 814
FokI GGATG 6 cut(s) 286, 803, 1140, 1667, 1793, 1990
FriOI GRGCYC 3 cut(s) 113, 433, 2544
FspBI CTAG 7 cut(s) 192, 1943, 1961, 2102, 2159, 2352, 2358
FspI TGCGCA 1 cut(s) 1587
GlaI GCGC 4 cut(s) 186, 687, 1344, 1587
GsaI CCCAGC 2 cut(s) 125, 373
HaeIII GGCC 8 cut(s) 111, 166, 326, 674, 976, 1645, 1851, 2624
HapII CCGG 5 cut(s) 41, 107, 375, 427, 2510
HgaI GACGC 3 cut(s) 141, 1901, 2222
HhaI GCGC 4 cut(s) 187, 688, 1345, 1588
Hin1I GRCGYC 1 cut(s) 1912
Hin1II CATG 7 cut(s) 679, 927, 956, 1015, 1270, 1454, 1538
Hin6I GCGC 4 cut(s) 185, 686, 1343, 1586
HinP1I GCGC 4 cut(s) 185, 686, 1343, 1586
HincII GTYRAC 2 cut(s) 1069, 2259
HindII GTYRAC 2 cut(s) 1069, 2259
HindIII AAGCTT 2 cut(s) 1496, 2310
HpaII CCGG 5 cut(s) 41, 107, 375, 427, 2510
HphI GGTGA 1 cut(s) 1441
Hpy166II GTNNAC 5 cut(s) 869, 1069, 2030, 2068, 2259
Hpy8I GTNNAC 5 cut(s) 869, 1069, 2030, 2068, 2259
Hpy99I CGWCG 4 cut(s) 28, 89, 135, 1917
HpyAV CCTTC 8 cut(s) 159, 273, 399, 1057, 1318, 1333, 1769, 2069
HpyCH4III ACNGT 7 cut(s) 117, 224, 591, 1525, 1563, 1867, 2226
HpyCH4IV ACGT 2 cut(s) 379, 1396
HpySE526I ACGT 2 cut(s) 379, 1396
Hsp92I GRCGYC 1 cut(s) 1912
Hsp92II CATG 7 cut(s) 679, 927, 956, 1015, 1270, 1454, 1538
HspAI GCGC 4 cut(s) 185, 686, 1343, 1586
Kzo9I GATC 4 cut(s) 7, 175, 1381, 2189
LguI GCTCTTC 1 cut(s) 2532
LmnI GCTCC 2 cut(s) 1825, 2470
Lsp1109I GCAGC 6 cut(s) 67, 288, 322, 325, 1171, 2317
MabI ACCWGGT 1 cut(s) 2364
MaeI CTAG 7 cut(s) 192, 1943, 1961, 2102, 2159, 2352, 2358
MaeII ACGT 2 cut(s) 379, 1396
MaeIII GTNAC 3 cut(s) 224, 1469, 1916
MalI GATC 4 cut(s) 9, 177, 1383, 2191
MbiI CCGCTC 1 cut(s) 2620
MboI GATC 4 cut(s) 7, 175, 1381, 2189
MflI RGATCY 1 cut(s) 2189
MhlI GDGCHC 7 cut(s) 113, 369, 433, 1402, 1570, 1680, 2544
MlsI TGGCCA 1 cut(s) 674
MluCI AATT 9 cut(s) 354, 522, 609, 1256, 1698, 1741, 2139, 2328, 2340
MluNI TGGCCA 1 cut(s) 674
MlyI GAGTC 5 cut(s) 29, 1064, 2116, 2159, 2177
MmeI TCCRAC 3 cut(s) 629, 1483, 1632
Mox20I TGGCCA 1 cut(s) 674
Mph1103I ATGCAT 1 cut(s) 301
MscI TGGCCA 1 cut(s) 674
MseI TTAA 4 cut(s) 357, 1553, 1745, 2138
MslI CAYNNNNRTG 3 cut(s) 1271, 1427, 2673
Msp20I TGGCCA 1 cut(s) 674
MspA1I CMGCKG 1 cut(s) 58
MspI CCGG 5 cut(s) 41, 107, 375, 427, 2510
Mva1269I GAATGC 3 cut(s) 1624, 1949, 2176
MvaI CCWGG 5 cut(s) 421, 1475, 1578, 2366, 2534
MvnI CGCG 5 cut(s) 185, 210, 1345, 2044, 2460
NciI CCSGG 5 cut(s) 107, 108, 375, 427, 428
NdeI CATATG 1 cut(s) 814
NdeII GATC 4 cut(s) 7, 175, 1381, 2189
NlaIII CATG 7 cut(s) 679, 927, 956, 1015, 1270, 1454, 1538
NlaIV GGNNCC 8 cut(s) 111, 167, 325, 366, 425, 759, 1109, 1992
NmuCI GTSAC 3 cut(s) 224, 1469, 1916
NruI TCGCGA 1 cut(s) 2044
NsbI TGCGCA 1 cut(s) 1587
NsiI ATGCAT 1 cut(s) 301
NspI RCATGY 2 cut(s) 1015, 1454
NspV TTCGAA 2 cut(s) 1337, 1668
OliI CACNNNNGTG 1 cut(s) 1427
PaeI GCATGC 1 cut(s) 1015
PaeR7I CTCGAG 2 cut(s) 432, 2185
PciI ACATGT 1 cut(s) 1450
PciSI GCTCTTC 1 cut(s) 2532
PctI GAATGC 3 cut(s) 1624, 1949, 2176
PfeI GAWTC 9 cut(s) 259, 601, 941, 1710, 2129, 2153, 2293, 2348, 2382
PflFI GACNNNGTC 1 cut(s) 230
PfoI TCCNGGA 1 cut(s) 419
Ple19I CGATCG 1 cut(s) 178
PleI GAGTC 5 cut(s) 28, 1064, 2115, 2159, 2177
PmaCI CACGTG 1 cut(s) 1397
PmlI CACGTG 1 cut(s) 1397
PpsI GAGTC 5 cut(s) 28, 1064, 2115, 2159, 2177
Ppu21I YACGTR 1 cut(s) 1397
PpuMI RGGWCCY 1 cut(s) 423
PscI ACATGT 1 cut(s) 1450
PshBI ATTAAT 1 cut(s) 2138
PsiI TTATAA 1 cut(s) 2333
Psp124BI GAGCTC 1 cut(s) 2544
Psp5II RGGWCCY 1 cut(s) 423
Psp6I CCWGG 5 cut(s) 419, 1473, 1576, 2364, 2532
PspCI CACGTG 1 cut(s) 1397
PspFI CCCAGC 2 cut(s) 121, 369
PspGI CCWGG 5 cut(s) 419, 1473, 1576, 2364, 2532
PspN4I GGNNCC 8 cut(s) 111, 167, 325, 366, 425, 759, 1109, 1992
PspOMI GGGCCC 1 cut(s) 109
PspPI GGNCC 8 cut(s) 109, 110, 165, 202, 324, 423, 974, 2622
PspPPI RGGWCCY 1 cut(s) 423
PsuI RGATCY 1 cut(s) 2189
PsyI GACNNNGTC 1 cut(s) 230
PvuI CGATCG 1 cut(s) 178
PvuII CAGCTG 1 cut(s) 58
RruI TCGCGA 1 cut(s) 2044
RsaI GTAC 5 cut(s) 495, 565, 692, 1206, 2655
RsaNI GTAC 5 cut(s) 494, 564, 691, 1205, 2654
RseI CAYNNNNRTG 3 cut(s) 1271, 1427, 2673
SacI GAGCTC 1 cut(s) 2544
SapI GCTCTTC 1 cut(s) 2532
SaqAI TTAA 4 cut(s) 357, 1553, 1745, 2138
Sau3AI GATC 4 cut(s) 7, 175, 1381, 2189
Sau96I GGNCC 8 cut(s) 109, 110, 165, 202, 324, 423, 974, 2622
SchI GAGTC 5 cut(s) 29, 1064, 2116, 2159, 2177
SduI GDGCHC 7 cut(s) 113, 369, 433, 1402, 1570, 1680, 2544
SexAI ACCWGGT 1 cut(s) 2364
SfcI CTRYAG 2 cut(s) 1167, 1571
Sfr274I CTCGAG 2 cut(s) 432, 2185
SfuI TTCGAA 2 cut(s) 1337, 1668
SinI GGWCC 2 cut(s) 202, 423
SlaI CTCGAG 2 cut(s) 432, 2185
SmaI CCCGGG 2 cut(s) 108, 428
SmiI ATTTAAAT 1 cut(s) 1746
SmiMI CAYNNNNRTG 3 cut(s) 1271, 1427, 2673
SmlI CTYRAG 5 cut(s) 432, 533, 1154, 2185, 2465
SmoI CTYRAG 5 cut(s) 432, 533, 1154, 2185, 2465
SpeI ACTAGT 1 cut(s) 191
SphI GCATGC 1 cut(s) 1015
Sse9I AATT 9 cut(s) 354, 522, 609, 1256, 1698, 1741, 2139, 2328, 2340
SspI AATATT 2 cut(s) 577, 849
SspMI CTAG 7 cut(s) 192, 1943, 1961, 2102, 2159, 2352, 2358
SstI GAGCTC 1 cut(s) 2544
StyI CCWWGG 2 cut(s) 977, 2115
SwaI ATTTAAAT 1 cut(s) 1746
TaaI ACNGT 7 cut(s) 117, 224, 591, 1525, 1563, 1867, 2226
TaiI ACGT 2 cut(s) 382, 1399
TaqI TCGA 7 cut(s) 26, 130, 433, 1337, 1668, 2186, 2324
TasI AATT 9 cut(s) 354, 522, 609, 1256, 1698, 1741, 2139, 2328, 2340
TatI WGTACW 2 cut(s) 690, 1204
TauI GCSGC 4 cut(s) 84, 200, 517, 1724
TfiI GAWTC 9 cut(s) 259, 601, 941, 1710, 2129, 2153, 2293, 2348, 2382
Tru1I TTAA 4 cut(s) 357, 1553, 1745, 2138
Tru9I TTAA 4 cut(s) 357, 1553, 1745, 2138
TscAI CASTG 9 cut(s) 120, 594, 675, 1429, 1568, 1870, 2392, 2430, 2646
TseFI GTSAC 3 cut(s) 224, 1469, 1916
TseI GCWGC 6 cut(s) 55, 276, 335, 338, 1159, 2305
Tsp45I GTSAC 3 cut(s) 224, 1469, 1916
TspGWI ACGGA 3 cut(s) 85, 228, 2671
TspMI CCCGGG 2 cut(s) 106, 426
TspRI CASTG 9 cut(s) 120, 594, 675, 1429, 1568, 1870, 2392, 2430, 2646
Tth111I GACNNNGTC 1 cut(s) 230
VpaK11BI GGWCC 2 cut(s) 202, 423
VspI ATTAAT 1 cut(s) 2138
XagI CCTNNNNNAGG 1 cut(s) 1322
XapI RAATTY 3 cut(s) 1256, 1741, 2340
XbaI TCTAGA 2 cut(s) 1942, 2101
XceI RCATGY 2 cut(s) 1015, 1454
XhoI CTCGAG 2 cut(s) 432, 2185
XmaI CCCGGG 2 cut(s) 106, 426
XspI CTAG 7 cut(s) 192, 1943, 1961, 2102, 2159, 2352, 2358
Zsp2I ATGCAT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.