Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005545

Physical Location & Seq

Genomic Coordinates Reverse (-)

43828034 .. 43832028

Gene Structure 3995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0319700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGGTATGTTGGGGCTTGTTATCCGAGTAAACTGTCTATTCTTGTTATTGTTCTTGGTATGTTCTACCCCTCCGGAGGACCACATCAAGTGTTCATCGTCAAACAACACAAACTGCACCATCACAAACTCCTACGGCATCTTCCCCGATCGAACTGTCTGTAAAGCGACTAGTGTATCATACCCTAGTACGGAGGAAGAACTCGTTAAGGTAGTGGCTGATGCAACCAAGAACAAGAAGAGCATGAAGGTGGCGACTCGTTACTCCCACAGCATTCCCAAGCTGGTTTGCCCGCGCGGCGAAGATGGGCTGATCATAAGCACCAACAACCTCAACCGTGTGGTTAAGGTCGACGTTGAAGGGATGACGATGACGGTGGAGAGCGGCGTGACGCTTAGGCAGGTGATCAGTGAGGCTGCCAAGGTTGGCTTGGCGTTGCCTTACGCACCATATTGGTGGGGGCTAACTGTCGGTGGGTTGCTAGGGACTGGTGCGCATGGAAGCACATTATGGGCTAAGGGAAGCTCTGTTCATGATTATGTGGTGGGACTTAGGATTGTGAGTCCAGGAGGGCCCGAAGATGGTTATGTCAAGGTGAGAAGTCTCAGTCAAGGTGATAAAGATCTTAATGCAGCTAAGGTTTCACTTGGAGTCTTAGGAGTAATATCACAGGTTACTCTAAACCTACAACCCATGTTCAAGAGGTCCATCACATATTTGAGCAAGAACGATTCTGACTTGGGAGATCAAGTGCTTAAGTTTGGCAAGCAGCATGAGTTTGCGGACATACTATGGTATCCTAGCCAGCACAAGGCAGTTTATCGAGTAGATGATCGTATCTCCTCAAACACATCCGGAAATGGTTTATATGATTTCCTTCCTTTTCGAGCAACACCTTCACTTGCACTGGCAGTTATAAGAACGGCAGAAGAGAACCAAGAATCAAAAAGCGATGCTGATGGGAAATGCTCTGGGGCAAAGTTAGTCACATCTGGGCTTCTATCCGATGCTTATGGTTTGACAAACAATGGTATAATCTTTACTGGATATCCTGTGATTGGATATCAGAACCGGCTTCAAGCATCTGGAACTTGCCTTGATGGTCTTCAAGATTCAAGAATCACAGCATGCGCATGGGACTCAAGGATCAAGGGCGAGTTTTTTCATCAAACAACCTTCAGCATCAGCTTGTCCGTGGCCAAAAGCTTCATTCAAGACGTGCAGAAGCTAGTTGAGATTGAACCCAAATCCCTCTGTGGAGTAGAAATCTACAATGGAATCCTAATGCGCTATGTCACCGCATCAACTGCTTACCTTGGCAAACAAGTAGATGCAATTGACTTCGACATCACTTATTACCGAAGCAAGGACCCCATGACGCCTAGGCTCCATGAAGGCATACTTGAAGAAATAGAGCAATTGGCACTGTTTAAGTACGGAGCATTGCCACATTGGGGAAAGAATAGGAACATAGCCTTTGATGGGGTGATGAAGAAGTACAAAAATGGTAAGGAGTTCTTGAGGGTTAAGGAAGTGTATGACCCAATGGGGCTATTCTCAAGTGAATGGAGTGACCAGGTCCTTGGAATTAAGGGTGAGGTTAACTTAGTCAAGGAAGGGTGCGCCCTAGAAGGGTTGTGCATTTGCTCACAAGACATTCATTGTGCCCCAAGCAAGGGCTACTTCTGTACACCGGGGAAAGTATTTAGGGATGCAAGGATCTGTACTCCGAATCATAATTCGACAAGAACCACAAGTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like

Protein Analysis

587

Amino Acids

64.34

Weight (kDa)

8.2

Isoelectric Point (pI)

30.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	59 - 191	5.9e-20	FAD binding domain
ALO	PF04030	388 - 526	5.8e-10	D-arabinono-1,4-lactone oxidase
GULLO2-like_3rd	PF22906	538 - 576	1.9e-23	L-gulonolactone oxidase 2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005545)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20860
malus_domestica	MD01G1117700.v1.1
prunus_persica	Prupe.2G225100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0365101 RchiOBHm_Chr7g0221441
rosa_laevigata	RLG00000027442 RLG00000027443 RLG00000027444
rosa_multiflora	Rmu_ssc0000112.1_g000004
rosa_roxburghii	Rroxscaffold_4G00291450 Rroxscaffold_4G00291460 Rroxscaffold_4G00291470 Rroxscaffold_4G00291480
rosa_rugosa	Rorug01G0319600 Rorug01G0319700 Rorug01G0319800 Rorug01G0319800
rosa_samantha	Rh1AG328500 Rh1BG290000 Rh1BG290100 Rh1CG306700 Rh1CG306800 Rh1DG321600 Rh1DG321700 Rh7AG342500 Rh7CG360000 Rh7DG340500
rosa_wichuraiana	Rw1G029150 Rw7G029070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	917
AarI	CACCTGC	1 cut(s)	391
Acc16I	TGCGCA	2 cut(s)	495, 1132
Acc36I	ACCTGC	1 cut(s)	391
AccBSI	CCGCTC	1 cut(s)	384
AccI	GTMKAC	1 cut(s)	351
AccII	CGCG	2 cut(s)	295, 297
AccIII	TCCGGA	2 cut(s)	73, 854
AciI	CCGC	5 cut(s)	293, 297, 384, 782, 1299
AclWI	GGATC	2 cut(s)	1154, 1727
AcoI	YGGCCR	1 cut(s)	1197
AcuI	CTGAAG	1 cut(s)	1162
AcyI	GRCGYC	1 cut(s)	1379
AfaI	GTAC	5 cut(s)	190, 1436, 1499, 1690, 1726
AflII	CTTAAG	1 cut(s)	755
AgsI	TTSAA	8 cut(s)	359, 700, 1079, 1109, 1116, 1214, 1241, 1406
AhlI	ACTAGT	1 cut(s)	170
AjiI	CACGTC	1 cut(s)	1219
AjnI	CCWGG	2 cut(s)	565, 1575
AloI	GAACNNNNNNTCC	2 cut(s)	513, 545
AluBI	AGCT	6 cut(s)	283, 525, 635, 1188, 1206, 1228
AluI	AGCT	6 cut(s)	283, 525, 635, 1188, 1206, 1228
Alw26I	GTCTC	1 cut(s)	608
AlwI	GGATC	2 cut(s)	1154, 1727
Aor13HI	TCCGGA	2 cut(s)	73, 854
AoxI	GGCC	2 cut(s)	572, 1197
ApaI	GGGCCC	1 cut(s)	576
ApeKI	GCWGC	3 cut(s)	416, 632, 769
AspA2I	CCTAGG	1 cut(s)	1382
AspLEI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1625
AspS9I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
AsuC2I	CCSGG	1 cut(s)	1695
AsuHPI	GGTGA	6 cut(s)	415, 607, 626, 1288, 1498, 1607
AvaII	GGWCC	4 cut(s)	79, 705, 1369, 1579
AvrII	CCTAGG	1 cut(s)	1382
BaeGI	GKGCMC	2 cut(s)	576, 1669
BaeI	ACNNNNGTAYC	4 cut(s)	159, 192, 779, 812
BalI	TGGCCA	1 cut(s)	1199
BanII	GRGCYC	1 cut(s)	576
BbsI	GAAGAC	1 cut(s)	1097
BbvI	GCAGC	3 cut(s)	403, 644, 781
BccI	CCATC	7 cut(s)	128, 299, 575, 716, 953, 1094, 1475
BceAI	ACGGC	2 cut(s)	151, 939
BciT130I	CCWGG	2 cut(s)	567, 1577
BciVI	GTATCC	1 cut(s)	807
BclI	TGATCA	2 cut(s)	312, 405
BcnI	CCSGG	1 cut(s)	1695
BcoDI	GTCTC	1 cut(s)	608
BcuI	ACTAGT	1 cut(s)	170
BfaI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1628, 1762
BfrI	CTTAAG	1 cut(s)	755
BfuAI	ACCTGC	1 cut(s)	391
BfuI	GTATCC	1 cut(s)	807
BglI	GCCNNNNNGGC	1 cut(s)	297
BglII	AGATCT	1 cut(s)	622
BisI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
BlnI	CCTAGG	1 cut(s)	1382
BlsI	GCNGC	5 cut(s)	299, 386, 418, 634, 771
Bme1390I	CCNGG	3 cut(s)	567, 1577, 1695
Bme18I	GGWCC	4 cut(s)	79, 705, 1369, 1579
BmgBI	CACGTC	1 cut(s)	1219
BmgT120I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
BmiI	GGNNCC	3 cut(s)	574, 1371, 1388
BmrFI	CCNGG	3 cut(s)	567, 1577, 1695
BmsI	GCATC	9 cut(s)	147, 211, 943, 997, 1091, 1191, 1310, 1321, 1702
BpiI	GAAGAC	1 cut(s)	1097
Bpu10I	CCTNAGC	3 cut(s)	395, 516, 636
BpuEI	CTTGAG	3 cut(s)	1126, 1540, 1543
BpuMI	CCSGG	1 cut(s)	1695
BsaBI	GATNNNNATC	1 cut(s)	621
BsaHI	GRCGYC	1 cut(s)	1379
BsaJI	CCNNGG	6 cut(s)	420, 1194, 1315, 1382, 1582, 1694
BsaWI	WCCGGW	2 cut(s)	73, 854
BsaXI	ACNNNNNCTCC	2 cut(s)	735, 765
Bse118I	RCCGGY	1 cut(s)	1071
Bse1I	ACTGG	3 cut(s)	493, 912, 1048
Bse3DI	GCAATG	1 cut(s)	1442
Bse8I	GATNNNNATC	1 cut(s)	621
BseAI	TCCGGA	2 cut(s)	73, 854
BseBI	CCWGG	2 cut(s)	567, 1577
BseDI	CCNNGG	6 cut(s)	420, 1194, 1315, 1382, 1582, 1694
BseGI	GGATG	3 cut(s)	369, 851, 1717
BseJI	GATNNNNATC	1 cut(s)	621
BseMI	GCAATG	1 cut(s)	1442
BseMII	CTCAG	1 cut(s)	619
BseNI	ACTGG	3 cut(s)	493, 912, 1048
BseRI	GAGGAG	1 cut(s)	832
BseSI	GKGCMC	2 cut(s)	576, 1669
BseXI	GCAGC	3 cut(s)	403, 644, 781
BsgI	GTGCAG	2 cut(s)	100, 1241
Bsh1236I	CGCG	2 cut(s)	295, 297
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	2 cut(s)	574, 1199
BsiEI	CGRYCG	1 cut(s)	151
BsiSI	CCGG	4 cut(s)	74, 855, 1072, 1694
BslFI	GGGAC	3 cut(s)	499, 561, 1151
BsmAI	GTCTC	1 cut(s)	608
BsmFI	GGGAC	3 cut(s)	499, 561, 1151
BsmI	GAATGC	1 cut(s)	273
BsnI	GGCC	2 cut(s)	574, 1199
Bsp120I	GGGCCC	1 cut(s)	572
Bsp1286I	GDGCHC	2 cut(s)	576, 1669
Bsp13I	TCCGGA	2 cut(s)	73, 854
Bsp1407I	TGTACA	1 cut(s)	1688
Bsp143I	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
BspACI	CCGC	5 cut(s)	293, 297, 384, 782, 1299
BspANI	GGCC	2 cut(s)	574, 1199
BspCNI	CTCAG	1 cut(s)	618
BspEI	TCCGGA	2 cut(s)	73, 854
BspFNI	CGCG	2 cut(s)	295, 297
BspHI	TCATGA	1 cut(s)	532
BspLI	GGNNCC	3 cut(s)	574, 1371, 1388
BspMI	ACCTGC	1 cut(s)	391
BspPI	GGATC	2 cut(s)	1154, 1727
BspQI	GCTCTTC	1 cut(s)	233
BspTI	CTTAAG	1 cut(s)	755
BsrBI	CCGCTC	1 cut(s)	384
BsrDI	GCAATG	1 cut(s)	1442
BsrFI	RCCGGY	1 cut(s)	1071
BsrGI	TGTACA	1 cut(s)	1688
BsrI	ACTGG	3 cut(s)	493, 912, 1048
BssAI	RCCGGY	1 cut(s)	1071
BssECI	CCNNGG	6 cut(s)	420, 1194, 1315, 1382, 1582, 1694
BssMI	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
BssNI	GRCGYC	1 cut(s)	1379
BssT1I	CCWWGG	4 cut(s)	420, 1315, 1382, 1582
Bst2UI	CCWGG	2 cut(s)	567, 1577
Bst4CI	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1428
Bst6I	CTCTTC	2 cut(s)	233, 924
BstACI	GRCGYC	1 cut(s)	1379
BstAFI	CTTAAG	1 cut(s)	755
BstAPI	GCANNNNNTGC	1 cut(s)	1307
BstAUI	TGTACA	1 cut(s)	1688
BstC8I	GCNNGC	4 cut(s)	293, 767, 806, 1129
BstDEI	CTNAG	7 cut(s)	395, 516, 551, 605, 636, 655, 1606
BstDSI	CCRYGG	1 cut(s)	1194
BstF5I	GGATG	3 cut(s)	369, 851, 1717
BstFNI	CGCG	2 cut(s)	295, 297
BstHHI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1625
BstKTI	GATC	8 cut(s)	151, 315, 408, 625, 748, 835, 1149, 1722
BstMAI	GTCTC	1 cut(s)	608
BstMBI	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
BstMCI	CGRYCG	1 cut(s)	151
BstMWI	GCNNNNNNNGC	2 cut(s)	297, 1307
BstNI	CCWGG	2 cut(s)	567, 1577
BstNSI	RCATGY	1 cut(s)	1131
BstSCI	CCNGG	3 cut(s)	565, 1575, 1693
BstSLI	GKGCMC	2 cut(s)	576, 1669
BstUI	CGCG	2 cut(s)	295, 297
BstV1I	GCAGC	3 cut(s)	403, 644, 781
BstV2I	GAAGAC	1 cut(s)	1097
BstX2I	RGATCY	2 cut(s)	622, 1719
BstXI	CCANNNNNNTGG	2 cut(s)	456, 1583
BstYI	RGATCY	2 cut(s)	622, 1719
BsuI	GTATCC	1 cut(s)	807
BsuRI	GGCC	2 cut(s)	574, 1199
BtgI	CCRYGG	1 cut(s)	1194
BtgZI	GCGATG	1 cut(s)	966
BtrI	CACGTC	1 cut(s)	1219
BtsCI	GGATG	3 cut(s)	369, 851, 1717
BtsIMutI	CAGTG	3 cut(s)	415, 905, 1424
BveI	ACCTGC	1 cut(s)	391
Cac8I	GCNNGC	4 cut(s)	293, 767, 806, 1129
CciI	TCATGA	1 cut(s)	532
CfoI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1625
Cfr10I	RCCGGY	1 cut(s)	1071
Cfr13I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
CseI	GACGC	2 cut(s)	400, 1387
CsiI	ACCWGGT	1 cut(s)	1575
Csp6I	GTAC	5 cut(s)	189, 1435, 1498, 1689, 1725
CviAII	CATG	9 cut(s)	244, 497, 533, 694, 773, 1128, 1134, 1375, 1391
CviQI	GTAC	5 cut(s)	189, 1435, 1498, 1689, 1725
DdeI	CTNAG	7 cut(s)	395, 516, 551, 605, 636, 655, 1606
DpnI	GATC	8 cut(s)	150, 314, 407, 624, 747, 834, 1148, 1721
DpnII	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
EaeI	YGGCCR	1 cut(s)	1197
Eam1104I	CTCTTC	2 cut(s)	233, 924
EarI	CTCTTC	2 cut(s)	233, 924
Eco130I	CCWWGG	4 cut(s)	420, 1315, 1382, 1582
Eco24I	GRGCYC	1 cut(s)	576
Eco32I	GATATC	2 cut(s)	1049, 1064
Eco47I	GGWCC	4 cut(s)	79, 705, 1369, 1579
Eco57I	CTGAAG	1 cut(s)	1162
EcoO109I	RGGNCCY	3 cut(s)	572, 1369, 1579
EcoRII	CCWGG	2 cut(s)	565, 1575
EcoRV	GATATC	2 cut(s)	1049, 1064
EcoT14I	CCWWGG	4 cut(s)	420, 1315, 1382, 1582
EcoT38I	GRGCYC	1 cut(s)	576
ErhI	CCWWGG	4 cut(s)	420, 1315, 1382, 1582
FaeI	CATG	9 cut(s)	247, 500, 536, 697, 776, 1131, 1137, 1378, 1394
FalI	AAGNNNNNCTT	8 cut(s)	413, 445, 1386, 1418, 1502, 1534, 1667, 1699
FaqI	GGGAC	3 cut(s)	499, 561, 1151
FatI	CATG	9 cut(s)	243, 496, 532, 693, 772, 1127, 1133, 1374, 1390
FauI	CCCGC	1 cut(s)	300
FbaI	TGATCA	2 cut(s)	312, 405
FblI	GTMKAC	1 cut(s)	351
Fnu4HI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
FokI	GGATG	3 cut(s)	376, 838, 1724
FriOI	GRGCYC	1 cut(s)	576
Fsp4HI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
FspAI	RTGCGCAY	2 cut(s)	495, 1132
FspBI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1628, 1762
FspI	TGCGCA	2 cut(s)	495, 1132
GlaI	GCGC	5 cut(s)	296, 495, 1132, 1289, 1624
GluI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
HaeIII	GGCC	2 cut(s)	574, 1199
HapII	CCGG	4 cut(s)	74, 855, 1072, 1694
HgaI	GACGC	2 cut(s)	400, 1387
HhaI	GCGC	5 cut(s)	297, 496, 1133, 1290, 1625
Hin1I	GRCGYC	1 cut(s)	1379
Hin1II	CATG	9 cut(s)	247, 500, 536, 697, 776, 1131, 1137, 1378, 1394
Hin6I	GCGC	5 cut(s)	295, 494, 1131, 1288, 1623
HinP1I	GCGC	5 cut(s)	295, 494, 1131, 1288, 1623
HincII	GTYRAC	2 cut(s)	352, 1603
HindII	GTYRAC	2 cut(s)	352, 1603
HindIII	AAGCTT	1 cut(s)	1204
HpaI	GTTAAC	1 cut(s)	1603
HpaII	CCGG	4 cut(s)	74, 855, 1072, 1694
HphI	GGTGA	6 cut(s)	415, 607, 626, 1288, 1498, 1607
Hpy166II	GTNNAC	4 cut(s)	31, 352, 1603, 1691
Hpy188I	TCNGA	5 cut(s)	26, 736, 1006, 1068, 1731
Hpy188III	TCNNGA	9 cut(s)	74, 533, 700, 855, 1086, 1109, 1116, 1214, 1519
Hpy8I	GTNNAC	4 cut(s)	31, 352, 1603, 1691
Hpy99I	CGWCG	1 cut(s)	356
HpyAV	CCTTC	8 cut(s)	241, 353, 887, 906, 1186, 1388, 1610, 1625
HpyCH4III	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1428
HpyCH4IV	ACGT	2 cut(s)	354, 1218
HpyCH4V	TGCA	8 cut(s)	117, 224, 632, 905, 1222, 1334, 1641, 1715
HpyF10VI	GCNNNNNNNGC	2 cut(s)	297, 1307
HpyF3I	CTNAG	7 cut(s)	395, 516, 551, 605, 636, 655, 1606
HpySE526I	ACGT	2 cut(s)	354, 1218
Hsp92I	GRCGYC	1 cut(s)	1379
Hsp92II	CATG	9 cut(s)	247, 500, 536, 697, 776, 1131, 1137, 1378, 1394
HspAI	GCGC	5 cut(s)	295, 494, 1131, 1288, 1623
Kpn2I	TCCGGA	2 cut(s)	73, 854
Ksp22I	TGATCA	2 cut(s)	312, 405
KspAI	GTTAAC	1 cut(s)	1603
Kzo9I	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
LguI	GCTCTTC	1 cut(s)	233
LmnI	GCTCC	2 cut(s)	1392, 1439
Lsp1109I	GCAGC	3 cut(s)	403, 644, 781
LweI	GCATC	9 cut(s)	147, 211, 943, 997, 1091, 1191, 1310, 1321, 1702
MabI	ACCWGGT	1 cut(s)	1575
MaeI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1628, 1762
MaeII	ACGT	2 cut(s)	354, 1218
MaeIII	GTNAC	7 cut(s)	260, 388, 673, 985, 1294, 1571, 1757
MalI	GATC	8 cut(s)	150, 314, 407, 624, 747, 834, 1148, 1721
MbiI	CCGCTC	1 cut(s)	384
MboI	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
MboII	GAAGA	9 cut(s)	133, 209, 250, 314, 590, 941, 1097, 1418, 1504
MfeI	CAATTG	2 cut(s)	1335, 1418
MflI	RGATCY	2 cut(s)	622, 1719
MhlI	GDGCHC	2 cut(s)	576, 1669
MlsI	TGGCCA	1 cut(s)	1199
MluCI	AATT	4 cut(s)	1335, 1418, 1587, 1738
MluNI	TGGCCA	1 cut(s)	1199
MlyI	GAGTC	4 cut(s)	250, 571, 660, 1133
Mox20I	TGGCCA	1 cut(s)	1199
MroI	TCCGGA	2 cut(s)	73, 854
MscI	TGGCCA	1 cut(s)	1199
MseI	TTAA	8 cut(s)	207, 345, 627, 756, 1431, 1527, 1590, 1602
MslI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1132
Msp20I	TGGCCA	1 cut(s)	1199
MspCI	CTTAAG	1 cut(s)	755
MspI	CCGG	4 cut(s)	74, 855, 1072, 1694
MspR9I	CCNGG	3 cut(s)	567, 1577, 1695
MunI	CAATTG	2 cut(s)	1335, 1418
Mva1269I	GAATGC	1 cut(s)	273
MvaI	CCWGG	2 cut(s)	567, 1577
MvnI	CGCG	2 cut(s)	295, 297
MwoI	GCNNNNNNNGC	2 cut(s)	297, 1307
NciI	CCSGG	1 cut(s)	1695
NdeII	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
NlaIII	CATG	9 cut(s)	247, 500, 536, 697, 776, 1131, 1137, 1378, 1394
NlaIV	GGNNCC	3 cut(s)	574, 1371, 1388
NmuCI	GTSAC	4 cut(s)	388, 985, 1294, 1571
NsbI	TGCGCA	2 cut(s)	495, 1132
NspI	RCATGY	1 cut(s)	1131
PaeI	GCATGC	1 cut(s)	1131
PagI	TCATGA	1 cut(s)	532
PaqCI	CACCTGC	1 cut(s)	391
PciSI	GCTCTTC	1 cut(s)	233
PctI	GAATGC	1 cut(s)	273
PfeI	GAWTC	6 cut(s)	731, 941, 1112, 1119, 1278, 1732
PflFI	GACNNNGTC	1 cut(s)	1577
PfoI	TCCNGGA	1 cut(s)	565
PkrI	GCNGC	5 cut(s)	299, 386, 418, 634, 771
Ple19I	CGATCG	1 cut(s)	151
PleI	GAGTC	4 cut(s)	250, 570, 659, 1133
PpsI	GAGTC	4 cut(s)	250, 570, 659, 1133
PpuMI	RGGWCCY	2 cut(s)	1369, 1579
PsiI	TTATAA	1 cut(s)	917
Psp5II	RGGWCCY	2 cut(s)	1369, 1579
Psp6I	CCWGG	2 cut(s)	565, 1575
PspGI	CCWGG	2 cut(s)	565, 1575
PspN4I	GGNNCC	3 cut(s)	574, 1371, 1388
PspOMI	GGGCCC	1 cut(s)	572
PspPI	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
PspPPI	RGGWCCY	2 cut(s)	1369, 1579
PsuI	RGATCY	2 cut(s)	622, 1719
PsyI	GACNNNGTC	1 cut(s)	1577
PvuI	CGATCG	1 cut(s)	151
RsaI	GTAC	5 cut(s)	190, 1436, 1499, 1690, 1726
RsaNI	GTAC	5 cut(s)	189, 1435, 1498, 1689, 1725
RseI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1132
SalI	GTCGAC	1 cut(s)	350
SapI	GCTCTTC	1 cut(s)	233
SaqAI	TTAA	8 cut(s)	207, 345, 627, 756, 1431, 1527, 1590, 1602
SatI	GCNGC	5 cut(s)	298, 385, 417, 633, 770
Sau3AI	GATC	8 cut(s)	148, 312, 405, 622, 745, 832, 1146, 1719
Sau96I	GGNCC	6 cut(s)	79, 572, 573, 705, 1369, 1579
SchI	GAGTC	4 cut(s)	250, 571, 660, 1133
ScrFI	CCNGG	3 cut(s)	567, 1577, 1695
SduI	GDGCHC	2 cut(s)	576, 1669
SexAI	ACCWGGT	1 cut(s)	1575
SfaNI	GCATC	9 cut(s)	147, 211, 943, 997, 1091, 1191, 1310, 1321, 1702
SinI	GGWCC	4 cut(s)	79, 705, 1369, 1579
SmiMI	CAYNNNNRTG	4 cut(s)	248, 454, 537, 1132
SmlI	CTYRAG	4 cut(s)	755, 1141, 1519, 1558
SmoI	CTYRAG	4 cut(s)	755, 1141, 1519, 1558
SpeI	ACTAGT	1 cut(s)	170
SphI	GCATGC	1 cut(s)	1131
Sse9I	AATT	4 cut(s)	1335, 1418, 1587, 1738
SsiI	CCGC	5 cut(s)	293, 297, 384, 782, 1299
SspMI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1628, 1762
StyD4I	CCNGG	3 cut(s)	565, 1575, 1693
StyI	CCWWGG	4 cut(s)	420, 1315, 1382, 1582
TaaI	ACNGT	6 cut(s)	35, 157, 338, 376, 469, 1428
TaiI	ACGT	2 cut(s)	357, 1221
TaqI	TCGA	6 cut(s)	151, 351, 823, 886, 1344, 1742
TasI	AATT	4 cut(s)	1335, 1418, 1587, 1738
TatI	WGTACW	3 cut(s)	1497, 1688, 1724
TauI	GCSGC	2 cut(s)	300, 387
TfiI	GAWTC	6 cut(s)	731, 941, 1112, 1119, 1278, 1732
Tru1I	TTAA	8 cut(s)	207, 345, 627, 756, 1431, 1527, 1590, 1602
Tru9I	TTAA	8 cut(s)	207, 345, 627, 756, 1431, 1527, 1590, 1602
TscAI	CASTG	3 cut(s)	415, 912, 1431
TseFI	GTSAC	4 cut(s)	388, 985, 1294, 1571
TseI	GCWGC	3 cut(s)	416, 632, 769
Tsp45I	GTSAC	4 cut(s)	388, 985, 1294, 1571
TspDTI	ATGAA	8 cut(s)	84, 260, 521, 1154, 1198, 1407, 1505, 1649
TspGWI	ACGGA	3 cut(s)	206, 1183, 1452
TspRI	CASTG	3 cut(s)	415, 912, 1431
Tth111I	GACNNNGTC	1 cut(s)	1577
Vha464I	CTTAAG	1 cut(s)	755
VpaK11BI	GGWCC	4 cut(s)	79, 705, 1369, 1579
XceI	RCATGY	1 cut(s)	1131
XcmI	CCANNNNNNNNNTGG	1 cut(s)	427
XmaJI	CCTAGG	1 cut(s)	1382
XmiI	GTMKAC	1 cut(s)	351
XspI	CTAG	8 cut(s)	171, 186, 482, 801, 1229, 1383, 1628, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.