Rorug01G0472600

Triphosphate tunel metalloenzyme

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002663
Physical Location & Seq
Reverse (-)
56310376 .. 56394919
84544 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0472600.1

Sequence Viewer

Length: 3405 bp
ATGGCGTTGAGCACCCAAGTTAGAGCCTCATCGGGTTCAGCTTTCCCGTGGAAATACGACGTGTTTTTGAGCTTCCGAGGTGAAGACACACGTAAGGGCTTCACAGACCACTTATACGACAAGTTACAGTGGCAAGGAATTAAGACTTTCCGGGACGACCCACAACTTGAAAGAGGCACAGCCATCTCTCCAGAACTCCTCACAGCAATTGAGCAATCGAGGTTTGCGATCGTTGTTCTTTCGCCAAACTATGCTTCTTCCACATGGTGCTTGCTTGAACTGTCTAAGATTCTTGAATGCATGGAGGAGAGGGGGACAATTCTGCCAATCTTTTATGAGGTGGATCCCTCTCATGTGAGACATCAAAGGGGCAGCTTTGCTGAAGCGTTTCAAGAGCATGAAGAGAAGTTTGGGGAAGCTAATAAGGAGGTGGGAGGGTGGAGAGATGCTTTAACCAAAGTGGCCAGTCTCGCTGGATGGACTTCAGAGAGTTATAGGTATGAATCAGAGCTTATCAGAGAGATTGTGCAAGCACTGTGGAGCAAAGTGCATCATAGTCTCGCTGTATTTGGTTCCTCAGAGAAGTTAGTTGGAATGGATACTAAGCTAAAGGAAATAGACGTTCTTTTAGATAAAGAAGCAAATGATGTTCGCTCTATAGGGATATGGGGGATGGGTGGTATGGGTAAAACAACCCTTGCCAGACTAGTTTACCAGAAAATCTCTCATCAATTTGAAGTTTGCATCTTTCTTGCTAATGTCAGAGAGGTTTCCAAAACAACCCATGGTCTAGTTGATCTACAAAAAAAAATTCTTTCCCAAATCTGTAAGGAAGAAAATGTTCAAGTATCAGATGATTGTAGTCGAATAACTATGATAAGGAGATGTGTTCATAATAAAGCGGTTCTTCTAGTTCTTGATGATATGGATCAATCAGAGCAACTGGAAAACTTGGTGGGAGAAAAAGATTGCTTTAGTTTGAGGAGTAGAATCATCATTACAACTAGAGATCGGCGTGTACTGGTCACACATGGTGTAGAAAAACCATATGAGTTGAATGGACTAAACGAAAATGAAGCTCTTCAGCTCTTTAGTTGGAAAGCCTTTAGGAAATGTGAGCCTGAAGAAGATTTTGCAAAACTGTGTAAGAGTTTTGTTACGTATGCTGGAGGTCTTCCGTTAGCTCTTAAAATTTTGGGGTCTTTCTTGAACGGAAGAACTGCAAATGAATGGAATTCTGCATTGGCAAAACTACAACAAACTCCCAACCAAAGAGTTTTTGAAATACTGAAGATAAGTTTTGATGGACTTGATGAGATGGAGAAGAAAAGTTTTCTGGACATTGCTTGTTTCCGCTGGTTGTATCGCAAGGAGTTTATGATTGAACTAGTAGACAGTTCTGACCCTTGCAATCGTATTACAAGAAGTGTTCTTGCTGAGAAATCTCTCTTAACTATTTCATCAGACAACCAGGTAGATGTGCATGACTTGATACACGAAATGGGATGTGAAATTGTTCGACAAGAGAATAAAGAGCCTGGTGGACGTAGTCGGTTATGTCTACGCAATGACATTTTTCATGTATTCACAAAGAATACGGGAACAGATGCCATTGAAGGCATATTGTTAGACTTGGCTGAATTAGAAGAGGCAGATTGGAATCTTGAAGCCTTCTCTAAAATGTGTAAACTGAAGCTGCTCTACATTCATAATTTGAGGCTTTCTCTTGGTCCAAAATTTCTTCCTAATGCCTTGAGATTTCTGAGTTGGAGTTGGTATCCTTCAAAATCTCTCCCACCATGTTTTCAACCGGATGAACTTACTGAACTCAGTTTGGTTCATAGCAATATTGATCACCTCTGGAATGGAATAAAATACTTGGGCAAGTTGAAATCTATCGATCTTAGTTACTCCATAAACTTGACAAGGACTCCAGATTTCACAGGTATTCCAAATCTTGAGAAGTTGGTTCTTGAAGGTTGTACCAATTTAGTTAAGATTCATCCATCCATTGCATTGCCGAAGAGACTCAAAATTTGGAATTTTAGAAACTGCAAAAGTATTAAGAGTCTACCAAGTGAATTAAATATGGAGTTTCTTGAAACATTTGATGTATCTGGCTGCTCAAAACTGAAAAAGATTCCAGAATTTGTGGGGCAAACGAAAAGATTATCAAAGCTTTGTTTAAGTGGGACTGCTGTTGAGAAACTGCCTTCAATTGAGCACTTGAGTGAGAGTTTGGTGGAGCTTGATTTGAATGGAATTGTTATAAGAGAGCAGCCACACTCCCTTTTTCTTAAGCAGAATCTCATAGTATCATCTTTTGGCTTATTTCGAAGAAAGAGTCCTCAGCCTTTGATTCCTCTGTTAGCTTCCTTGAAGCATTTCTCTTCTTTGACGACATTAAAGTTGAATGACTGTAATCTCTGTGAAGGAGAGATTCCCAATGATATTGGTTCTCTGTCCTCCTTAAGGTTCTTGGAACTCAGAGGAAACAATTTTGTTAGCCTTCCTGCAAGCATTCATTTGCTTTCTAAGCTTAGACGTATTAATGTGGAGAATTGCACAAAGCTTCAACAATTGCCAGAACTTCCGGCAAGTGAAGATTTAAGGGTGATAACGGACAATTGTACTTCCTTACAAGTGTTTCCAGATCCACCAGATTTGGGCAGATTAATGTGGTTTGATCTCGAATGCAGGAATTGCTCGAGTTTGGTTGGTTATCAAGATTATTTTTTTTATTCAGTGCTAAAGCGGTGGATTGAGATTGAGGTACTCTCTCGTTGTGATATGATGGTTCATATGCAGGAAACCCGTCGCGGCCCTAAACTGTCTCTCTCGTTTTTAATTCCTGGAAGTGAAATTCCAGAGTGGTTCAATAATCAAAGTGTGGGAGACTCGATAACTGAGAAGTTACCTTCGGATGCATGTAAAGGCAAGTGCATTGGGTTTGCTGTGTGTGCTCTAATTGTAGCTCAAGACGATCCGTCTGCCGTTCCTGAAAACCCCCATTTAGATCCTGATACCTGTCTAATTATGTTTGATTGGGACAATTATACTTCTTATGGTCAAATATTCAGAGTAAGACAATTTGTTTCAGATCACCTTTGGTTATCTGTTTTGCGAAGCCCTTTATGGGAACTTACTGAGAAGCGTCTGGAGGTTGTCTTCGAAACCACTGGAGCTGTAGGAAACAACAGATGCATAAAGGTGAAGAAATGTGGGGTCCGGGCACTGTACGAGCACGACATGGAAGAGCTGATCAGTAAAATGAACAAATCCAAGAGCAGCATTTCTCTTTACCAGGGTATGGATAAACAAGAAGGTTCCATGGTTAAGGCAACACGAGGCAGCAACAAGCGGAAGTGGTGCTCTGACGACGAATATTACTCTGCAGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CYTH

Protein Analysis

1134

Amino Acids

129.22

Weight (kDa)

6.16

Isoelectric Point (pI)

42.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 18 - 196 7.4e-57 TIR domain
TIR_2 PF13676 21 - 117 3.7e-16 TIR domain
NB-ARC PF00931 204 - 371 2e-25 NB-ARC domain
NACHT PF05729 222 - 364 3.7e-08 NACHT domain
WHD_ROQ1 PF23282 439 - 508 8.1e-09 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 699 - 887 5.8e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 792 - 964 1e-10 Leucine-rich repeat region
C-JID PF20160 950 - 1085 6.5e-14 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2270
AccB7I CCANNNNNTGG 1 cut(s) 3310
AccI GTMKAC 3 cut(s) 1392, 1561, 2071
AccII CGCG 1 cut(s) 2820
AciI CCGC 5 cut(s) 902, 1354, 2755, 2820, 3361
AclWI GGATC 6 cut(s) 338, 351, 936, 2648, 2978, 3011
AcoI YGGCCR 1 cut(s) 462
AcsI RAATTY 8 cut(s) 810, 1191, 1234, 1736, 2034, 2041, 2147, 2862
AcuI CTGAAG 6 cut(s) 402, 468, 1067, 1143, 1310, 1712
AdeI CACNNNGTG 2 cut(s) 267, 1034
AfaI GTAC 5 cut(s) 1020, 1984, 2632, 2775, 3239
AfiI CCNNNNNNNGG 4 cut(s) 2472, 2666, 3136, 3310
AflII CTTAAG 2 cut(s) 2297, 2470
AflIII ACRYGT 2 cut(s) 60, 89
AhdI GACNNNNNGTC 1 cut(s) 2986
AhlI ACTAGT 2 cut(s) 706, 1387
AjiI CACGTC 1 cut(s) 61
AjnI CCWGG 4 cut(s) 1470, 1537, 2851, 3303
AjuI GAANNNNNNNTTGG 6 cut(s) 238, 270, 393, 425, 1226, 1258
AleI CACNNNNGTG 1 cut(s) 2229
Alw21I GWGCWC 5 cut(s) 14, 2226, 2965, 3246, 3374
Alw26I GTCTC 6 cut(s) 352, 473, 563, 2020, 2838, 2889
AlwI GGATC 6 cut(s) 338, 351, 936, 2648, 2978, 3011
Ama87I CYCGRG 1 cut(s) 2707
AoxI GGCC 2 cut(s) 462, 2821
ApeKI GCWGC 6 cut(s) 372, 1696, 2121, 2278, 3288, 3351
ApoI RAATTY 8 cut(s) 810, 1191, 1234, 1736, 2034, 2041, 2147, 2862
ArsI GACNNNNNNTTYG 4 cut(s) 2019, 2051, 2329, 2361
AseI ATTAAT 2 cut(s) 2550, 2675
Asp700I GAANNNNTTC 5 cut(s) 387, 840, 1080, 1515, 2384
AspS9I GGNCC 3 cut(s) 1730, 2822, 3226
AsuC2I CCSGG 2 cut(s) 152, 3230
AsuHPI GGTGA 5 cut(s) 92, 1847, 2626, 3095, 3223
AsuII TTCGAA 2 cut(s) 2335, 3171
AvaI CYCGRG 1 cut(s) 2707
AvaII GGWCC 2 cut(s) 1730, 3226
BaeGI GKGCMC 1 cut(s) 3235
BalI TGGCCA 1 cut(s) 464
BamHI GGATCC 1 cut(s) 343
BarI GAAGNNNNNNTAC 2 cut(s) 1685, 1717
BauI CACGAG 1 cut(s) 3345
BbsI GAAGAC 3 cut(s) 90, 1166, 3160
Bbv12I GWGCWC 5 cut(s) 14, 2226, 2965, 3246, 3374
BbvCI CCTCAGC 1 cut(s) 2349
BbvI GCAGC 6 cut(s) 384, 1683, 2108, 2290, 3300, 3363
BccI CCATC 7 cut(s) 191, 471, 667, 1298, 1312, 2014, 2788
BceAI ACGGC 1 cut(s) 2978
BcgI CGANNNNNNTGC 2 cut(s) 2972, 3006
BciT130I CCWGG 4 cut(s) 1472, 1539, 2853, 3305
BciVI GTATCC 2 cut(s) 592, 1788
BclI TGATCA 2 cut(s) 1852, 3261
BcnI CCSGG 2 cut(s) 152, 3230
BcoDI GTCTC 6 cut(s) 352, 473, 563, 2020, 2838, 2889
BcuI ACTAGT 2 cut(s) 706, 1387
BfaI CTAG 5 cut(s) 707, 791, 911, 1005, 1388
BfmI CTRYAG 3 cut(s) 657, 3186, 3393
BfrI CTTAAG 2 cut(s) 2297, 2470
BfuI GTATCC 2 cut(s) 592, 1788
BisI GCNGC 7 cut(s) 373, 1697, 2122, 2279, 2821, 3289, 3352
BlsI GCNGC 7 cut(s) 374, 1698, 2123, 2280, 2822, 3290, 3353
Bme1390I CCNGG 6 cut(s) 152, 1472, 1539, 2853, 3230, 3305
Bme18I GGWCC 2 cut(s) 1730, 3226
BmeRI GACNNNNNGTC 1 cut(s) 2986
BmeT110I CYCGRG 1 cut(s) 2707
BmgBI CACGTC 1 cut(s) 61
BmgT120I GGNCC 3 cut(s) 1730, 2822, 3226
BmiI GGNNCC 4 cut(s) 345, 574, 3227, 3328
BmrFI CCNGG 6 cut(s) 152, 1472, 1539, 2853, 3230, 3305
BmsI GCATC 6 cut(s) 436, 559, 753, 1597, 2914, 3191
BpiI GAAGAC 3 cut(s) 90, 1166, 3160
BplI GAGNNNNNCTC 4 cut(s) 1708, 1740, 2762, 2794
BpmI CTGGAG 5 cut(s) 174, 1188, 1917, 3179, 3201
Bpu10I CCTNAGC 1 cut(s) 2349
Bpu14I TTCGAA 2 cut(s) 2335, 3171
BpuEI CTTGAG 4 cut(s) 1774, 1979, 2248, 2961
BpuMI CCSGG 2 cut(s) 152, 3230
Bsa29I ATCGAT 1 cut(s) 1899
BsaAI YACGTR 2 cut(s) 92, 1161
BsaBI GATNNNNATC 2 cut(s) 927, 1659
BsaJI CCNNGG 5 cut(s) 47, 76, 784, 3304, 3330
BsaWI WCCGGW 1 cut(s) 1810
BsaXI ACNNNNNCTCC 2 cut(s) 1915, 1945
Bsc4I CCNNNNNNNGG 4 cut(s) 2472, 2666, 3136, 3310
Bse1I ACTGG 4 cut(s) 465, 948, 1026, 3184
Bse3DI GCAATG 4 cut(s) 1341, 1573, 2010, 2015
Bse8I GATNNNNATC 2 cut(s) 927, 1659
BseBI CCWGG 4 cut(s) 1472, 1539, 2853, 3305
BseCI ATCGAT 1 cut(s) 1899
BseDI CCNNGG 5 cut(s) 47, 76, 784, 3304, 3330
BseGI GGATG 7 cut(s) 482, 678, 1511, 1819, 2002, 2006, 2929
BseJI GATNNNNATC 2 cut(s) 927, 1659
BseLI CCNNNNNNNGG 4 cut(s) 2472, 2666, 3136, 3310
BseMI GCAATG 4 cut(s) 1341, 1573, 2010, 2015
BseMII CTCAG 8 cut(s) 591, 1428, 1754, 1843, 2363, 2500, 2898, 3138
BseNI ACTGG 4 cut(s) 465, 948, 1026, 3184
BseRI GAGGAG 3 cut(s) 188, 320, 997
BseSI GKGCMC 1 cut(s) 3235
BseXI GCAGC 6 cut(s) 384, 1683, 2108, 2290, 3300, 3363
Bsh1236I CGCG 1 cut(s) 2820
Bsh1285I CGRYCG 1 cut(s) 231
BshFI GGCC 2 cut(s) 464, 2823
BshVI ATCGAT 1 cut(s) 1899
BsiEI CGRYCG 1 cut(s) 231
BsiHKAI GWGCWC 5 cut(s) 14, 2226, 2965, 3246, 3374
BsiHKCI CYCGRG 1 cut(s) 2707
BsiSI CCGG 4 cut(s) 151, 1811, 2594, 3229
BslFI GGGAC 4 cut(s) 167, 328, 2206, 3062
BslI CCNNNNNNNGG 4 cut(s) 2472, 2666, 3136, 3310
BsmAI GTCTC 6 cut(s) 352, 473, 563, 2020, 2838, 2889
BsmFI GGGAC 4 cut(s) 167, 328, 2206, 3062
BsmI GAATGC 3 cut(s) 302, 2520, 2699
BsnI GGCC 2 cut(s) 464, 2823
BsoBI CYCGRG 1 cut(s) 2707
Bsp119I TTCGAA 2 cut(s) 2335, 3171
Bsp1286I GDGCHC 6 cut(s) 14, 2226, 2965, 3235, 3246, 3374
Bsp19I CCATGG 2 cut(s) 784, 3330
BspACI CCGC 5 cut(s) 902, 1354, 2755, 2820, 3361
BspANI GGCC 2 cut(s) 464, 2823
BspCNI CTCAG 8 cut(s) 590, 1429, 1755, 1842, 2362, 2499, 2899, 3139
BspDI ATCGAT 1 cut(s) 1899
BspFNI CGCG 1 cut(s) 2820
BspLI GGNNCC 4 cut(s) 345, 574, 3227, 3328
BspMAI CTGCAG 1 cut(s) 3397
BspPI GGATC 6 cut(s) 338, 351, 936, 2648, 2978, 3011
BspQI GCTCTTC 2 cut(s) 1086, 3249
BspT104I TTCGAA 2 cut(s) 2335, 3171
BspTI CTTAAG 2 cut(s) 2297, 2470
BsrDI GCAATG 4 cut(s) 1341, 1573, 2010, 2015
BsrI ACTGG 4 cut(s) 465, 948, 1026, 3184
BssECI CCNNGG 5 cut(s) 47, 76, 784, 3304, 3330
BssSI CACGAG 1 cut(s) 3345
BssT1I CCWWGG 2 cut(s) 784, 3330
Bst2BI CACGAG 1 cut(s) 3345
Bst2UI CCWGG 4 cut(s) 1472, 1539, 2853, 3305
Bst4CI ACNGT 8 cut(s) 129, 282, 537, 1143, 1397, 2420, 2832, 3237
Bst6I CTCTTC 6 cut(s) 396, 1086, 1641, 2018, 2395, 3249
BstAFI CTTAAG 2 cut(s) 2297, 2470
BstAPI GCANNNNNTGC 1 cut(s) 2703
BstBAI YACGTR 2 cut(s) 92, 1161
BstBI TTCGAA 2 cut(s) 2335, 3171
BstC8I GCNNGC 3 cut(s) 272, 531, 2518
BstDSI CCRYGG 3 cut(s) 47, 784, 3330
BstENI CCTNNNNNAGG 1 cut(s) 2470
BstF5I GGATG 7 cut(s) 482, 678, 1511, 1819, 2002, 2006, 2929
BstFNI CGCG 1 cut(s) 2820
BstMAI GTCTC 6 cut(s) 352, 473, 563, 2020, 2838, 2889
BstMCI CGRYCG 1 cut(s) 231
BstMWI GCNNNNNNNGC 4 cut(s) 470, 2536, 2703, 2960
BstNI CCWGG 4 cut(s) 1472, 1539, 2853, 3305
BstNSI RCATGY 1 cut(s) 2931
BstSCI CCNGG 6 cut(s) 150, 1470, 1537, 2851, 3228, 3303
BstSFI CTRYAG 3 cut(s) 657, 3186, 3393
BstSLI GKGCMC 1 cut(s) 3235
BstSNI TACGTA 1 cut(s) 1161
BstUI CGCG 1 cut(s) 2820
BstV1I GCAGC 6 cut(s) 384, 1683, 2108, 2290, 3300, 3363
BstV2I GAAGAC 3 cut(s) 90, 1166, 3160
BstX2I RGATCY 3 cut(s) 343, 2653, 3016
BstYI RGATCY 3 cut(s) 343, 2653, 3016
Bsu15I ATCGAT 1 cut(s) 1899
BsuI GTATCC 2 cut(s) 592, 1788
BsuRI GGCC 2 cut(s) 464, 2823
BsuTUI ATCGAT 1 cut(s) 1899
BtgI CCRYGG 3 cut(s) 47, 784, 3330
BtrI CACGTC 1 cut(s) 61
BtsCI GGATG 7 cut(s) 482, 678, 1511, 1819, 2002, 2006, 2929
BtsIMutI CAGTG 5 cut(s) 134, 533, 2751, 3177, 3233
Cac8I GCNNGC 3 cut(s) 272, 531, 2518
Cfr13I GGNCC 3 cut(s) 1730, 2822, 3226
ClaI ATCGAT 1 cut(s) 1899
CseI GACGC 1 cut(s) 3143
CsiI ACCWGGT 1 cut(s) 1470
Csp6I GTAC 5 cut(s) 1019, 1983, 2631, 2774, 3238
CspCI CAANNNNNGTGG 4 cut(s) 518, 553, 2646, 2681
CviQI GTAC 5 cut(s) 1019, 1983, 2631, 2774, 3238
DraIII CACNNNGTG 2 cut(s) 267, 1034
DriI GACNNNNNGTC 1 cut(s) 2986
EaeI YGGCCR 1 cut(s) 462
Eam1104I CTCTTC 6 cut(s) 396, 1086, 1641, 2018, 2395, 3249
Eam1105I GACNNNNNGTC 1 cut(s) 2986
EarI CTCTTC 6 cut(s) 396, 1086, 1641, 2018, 2395, 3249
Eco105I TACGTA 1 cut(s) 1161
Eco130I CCWWGG 2 cut(s) 784, 3330
Eco47I GGWCC 2 cut(s) 1730, 3226
Eco57I CTGAAG 6 cut(s) 402, 468, 1067, 1143, 1310, 1712
Eco88I CYCGRG 1 cut(s) 2707
EcoNI CCTNNNNNAGG 1 cut(s) 2470
EcoRI GAATTC 1 cut(s) 1234
EcoRII CCWGG 4 cut(s) 1470, 1537, 2851, 3303
EcoT14I CCWWGG 2 cut(s) 784, 3330
EcoT22I ATGCAT 3 cut(s) 302, 2929, 3206
ErhI CCWWGG 2 cut(s) 784, 3330
FalI AAGNNNNNCTT 2 cut(s) 891, 923
FaqI GGGAC 4 cut(s) 167, 328, 2206, 3062
FauNDI CATATG 2 cut(s) 1048, 2802
FbaI TGATCA 2 cut(s) 1852, 3261
FblI GTMKAC 3 cut(s) 1392, 1561, 2071
Fnu4HI GCNGC 7 cut(s) 373, 1697, 2122, 2279, 2821, 3289, 3352
FokI GGATG 7 cut(s) 489, 685, 1518, 1826, 1989, 1993, 2936
Fsp4HI GCNGC 7 cut(s) 373, 1697, 2122, 2279, 2821, 3289, 3352
FspBI CTAG 5 cut(s) 707, 791, 911, 1005, 1388
GluI GCNGC 7 cut(s) 373, 1697, 2122, 2279, 2821, 3289, 3352
GsuI CTGGAG 5 cut(s) 174, 1188, 1917, 3179, 3201
HaeIII GGCC 2 cut(s) 464, 2823
HapII CCGG 4 cut(s) 151, 1811, 2594, 3229
HgaI GACGC 1 cut(s) 3143
HindIII AAGCTT 3 cut(s) 2177, 2537, 2570
HpaII CCGG 4 cut(s) 151, 1811, 2594, 3229
HphI GGTGA 5 cut(s) 92, 1847, 2626, 3095, 3223
Hpy166II GTNNAC 7 cut(s) 712, 1019, 1393, 1544, 1562, 1688, 2072
Hpy8I GTNNAC 7 cut(s) 712, 1019, 1393, 1544, 1562, 1688, 2072
Hpy99I CGWCG 3 cut(s) 62, 2820, 3383
HpyAV CCTTC 9 cut(s) 1610, 1681, 1791, 1970, 2223, 2426, 2519, 2928, 3317
HpyCH4III ACNGT 8 cut(s) 129, 282, 537, 1143, 1397, 2420, 2832, 3237
HpyCH4IV ACGT 6 cut(s) 60, 91, 621, 1160, 1546, 2545
HpyF10VI GCNNNNNNNGC 4 cut(s) 470, 2536, 2703, 2960
HpySE526I ACGT 6 cut(s) 60, 91, 621, 1160, 1546, 2545
Ksp22I TGATCA 2 cut(s) 1852, 3261
LguI GCTCTTC 2 cut(s) 1086, 3249
LmnI GCTCC 3 cut(s) 540, 2245, 3182
Lsp1109I GCAGC 6 cut(s) 384, 1683, 2108, 2290, 3300, 3363
LweI GCATC 6 cut(s) 436, 559, 753, 1597, 2914, 3191
MabI ACCWGGT 1 cut(s) 1470
MaeI CTAG 5 cut(s) 707, 791, 911, 1005, 1388
MaeII ACGT 6 cut(s) 60, 91, 621, 1160, 1546, 2545
MaeIII GTNAC 5 cut(s) 123, 1024, 1156, 1907, 2913
MfeI CAATTG 4 cut(s) 207, 2217, 2579, 2626
MflI RGATCY 3 cut(s) 343, 2653, 3016
MhlI GDGCHC 6 cut(s) 14, 2226, 2965, 3235, 3246, 3374
MlsI TGGCCA 1 cut(s) 464
MluNI TGGCCA 1 cut(s) 464
MlyI GAGTC 5 cut(s) 1924, 2022, 2077, 2353, 2891
MmeI TCCRAC 3 cut(s) 571, 1076, 1748
Mox20I TGGCCA 1 cut(s) 464
Mph1103I ATGCAT 3 cut(s) 302, 2929, 3206
MroXI GAANNNNTTC 5 cut(s) 387, 840, 1080, 1515, 2384
MscI TGGCCA 1 cut(s) 464
MslI CAYNNNNRTG 2 cut(s) 2229, 3209
Msp20I TGGCCA 1 cut(s) 464
MspA1I CMGCKG 1 cut(s) 1356
MspCI CTTAAG 2 cut(s) 2297, 2470
MspI CCGG 4 cut(s) 151, 1811, 2594, 3229
MspR9I CCNGG 6 cut(s) 152, 1472, 1539, 2853, 3230, 3305
MunI CAATTG 4 cut(s) 207, 2217, 2579, 2626
Mva1269I GAATGC 3 cut(s) 302, 2520, 2699
MvaI CCWGG 4 cut(s) 1472, 1539, 2853, 3305
MvnI CGCG 1 cut(s) 2820
MwoI GCNNNNNNNGC 4 cut(s) 470, 2536, 2703, 2960
NciI CCSGG 2 cut(s) 152, 3230
NcoI CCATGG 2 cut(s) 784, 3330
NdeI CATATG 2 cut(s) 1048, 2802
NlaIV GGNNCC 4 cut(s) 345, 574, 3227, 3328
NmuCI GTSAC 1 cut(s) 1024
NsiI ATGCAT 3 cut(s) 302, 2929, 3206
NspI RCATGY 1 cut(s) 2931
NspV TTCGAA 2 cut(s) 2335, 3171
OliI CACNNNNGTG 1 cut(s) 2229
PaeR7I CTCGAG 1 cut(s) 2707
PciSI GCTCTTC 2 cut(s) 1086, 3249
PcsI WCGNNNNNNNCGW 1 cut(s) 224
PctI GAATGC 3 cut(s) 302, 2520, 2699
PdmI GAANNNNTTC 5 cut(s) 387, 840, 1080, 1515, 2384
PfeI GAWTC 9 cut(s) 289, 503, 990, 1660, 1999, 2140, 2305, 2359, 2440
PflFI GACNNNGTC 1 cut(s) 1548
PflMI CCANNNNNTGG 1 cut(s) 3310
PfoI TCCNGGA 2 cut(s) 150, 2851
PkrI GCNGC 7 cut(s) 374, 1698, 2123, 2280, 2822, 3290, 3353
Ple19I CGATCG 1 cut(s) 231
PleI GAGTC 5 cut(s) 1924, 2022, 2076, 2352, 2891
PpsI GAGTC 5 cut(s) 1924, 2022, 2076, 2352, 2891
Ppu21I YACGTR 2 cut(s) 92, 1161
PshBI ATTAAT 2 cut(s) 2550, 2675
PsiI TTATAA 1 cut(s) 2270
Psp6I CCWGG 4 cut(s) 1470, 1537, 2851, 3303
PspGI CCWGG 4 cut(s) 1470, 1537, 2851, 3303
PspN4I GGNNCC 4 cut(s) 345, 574, 3227, 3328
PspPI GGNCC 3 cut(s) 1730, 2822, 3226
PspXI VCTCGAGB 1 cut(s) 2707
PstI CTGCAG 1 cut(s) 3397
PsuI RGATCY 3 cut(s) 343, 2653, 3016
PsyI GACNNNGTC 1 cut(s) 1548
PvuI CGATCG 1 cut(s) 231
RsaI GTAC 5 cut(s) 1020, 1984, 2632, 2775, 3239
RsaNI GTAC 5 cut(s) 1019, 1983, 2631, 2774, 3238
RseI CAYNNNNRTG 2 cut(s) 2229, 3209
SapI GCTCTTC 2 cut(s) 1086, 3249
SatI GCNGC 7 cut(s) 373, 1697, 2122, 2279, 2821, 3289, 3352
Sau96I GGNCC 3 cut(s) 1730, 2822, 3226
SchI GAGTC 5 cut(s) 1924, 2022, 2077, 2353, 2891
ScrFI CCNGG 6 cut(s) 152, 1472, 1539, 2853, 3230, 3305
SduI GDGCHC 6 cut(s) 14, 2226, 2965, 3235, 3246, 3374
SexAI ACCWGGT 1 cut(s) 1470
SfaNI GCATC 6 cut(s) 436, 559, 753, 1597, 2914, 3191
SfcI CTRYAG 3 cut(s) 657, 3186, 3393
Sfr274I CTCGAG 1 cut(s) 2707
SfuI TTCGAA 2 cut(s) 2335, 3171
SinI GGWCC 2 cut(s) 1730, 3226
SlaI CTCGAG 1 cut(s) 2707
SmiMI CAYNNNNRTG 2 cut(s) 2229, 3209
SmlI CTYRAG 7 cut(s) 1753, 1958, 2227, 2297, 2470, 2707, 2976
SmoI CTYRAG 7 cut(s) 1753, 1958, 2227, 2297, 2470, 2707, 2976
SnaBI TACGTA 1 cut(s) 1161
SpeI ACTAGT 2 cut(s) 706, 1387
SsiI CCGC 5 cut(s) 902, 1354, 2755, 2820, 3361
SspI AATATT 3 cut(s) 1849, 3075, 3386
SspMI CTAG 5 cut(s) 707, 791, 911, 1005, 1388
StyD4I CCNGG 6 cut(s) 150, 1470, 1537, 2851, 3228, 3303
StyI CCWWGG 2 cut(s) 784, 3330
TaaI ACNGT 8 cut(s) 129, 282, 537, 1143, 1397, 2420, 2832, 3237
TaiI ACGT 6 cut(s) 63, 94, 624, 1163, 1549, 2548
TaqI TCGA 9 cut(s) 218, 865, 1519, 1899, 2335, 2691, 2708, 2900, 3171
TatI WGTACW 2 cut(s) 1018, 2630
TauI GCSGC 1 cut(s) 2823
TfiI GAWTC 9 cut(s) 289, 503, 990, 1660, 1999, 2140, 2305, 2359, 2440
TscAI CASTG 5 cut(s) 134, 540, 2751, 3184, 3240
TseFI GTSAC 1 cut(s) 1024
TseI GCWGC 6 cut(s) 372, 1696, 2121, 2278, 3288, 3351
Tsp45I GTSAC 1 cut(s) 1024
TspGWI ACGGA 4 cut(s) 1167, 1227, 2636, 2976
TspRI CASTG 5 cut(s) 134, 540, 2751, 3184, 3240
Tth111I GACNNNGTC 1 cut(s) 1548
Van91I CCANNNNNTGG 1 cut(s) 3310
Vha464I CTTAAG 2 cut(s) 2297, 2470
VpaK11BI GGWCC 2 cut(s) 1730, 3226
VspI ATTAAT 2 cut(s) 2550, 2675
XagI CCTNNNNNAGG 1 cut(s) 2470
XapI RAATTY 8 cut(s) 810, 1191, 1234, 1736, 2034, 2041, 2147, 2862
XceI RCATGY 1 cut(s) 2931
XhoI CTCGAG 1 cut(s) 2707
XmiI GTMKAC 3 cut(s) 1392, 1561, 2071
XmnI GAANNNNTTC 5 cut(s) 387, 840, 1080, 1515, 2384
XspI CTAG 5 cut(s) 707, 791, 911, 1005, 1388
Zsp2I ATGCAT 3 cut(s) 302, 2929, 3206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.