Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002233

Physical Location & Seq

Genomic Coordinates Reverse (-)

5045851 .. 5048280

Gene Structure 2430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0064200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGCAATGACTTCTCGTATCATCTCCCCTAACCAAAGCGCCTTCATTAGAGGACGGTCCATTGTTGATCCCATTGTGCTGACCTCAGAATGTGTGAACCTCCTTGACAAGAAATGTAAGTATGGGAATTTAGCTATTAAATTTGACATTAGCAAAGCCTTTGACACTTTGGACTGGAATTTTCTTCTTCGTGTCCTCCGTGCCTTTGGGTTTGATGCCACCTTCGTTAACTACATTCACACTATCTTGCAATCTGCATATATATCTGTCAGTGTTAATGGGCAGGTCAATGGGTACTTTACATGCTCCAGGGGTGTCCGTCAAGGTGATCCTTTATCTCCTTTACTGTTTTGCCTAGCAGAAGAAGTCCTAAGTCGTGGCCTTTCTTCTCTGGTTAATAGAAGGAAGATAAGGACAATTGCAGCGCCATCAAGTGTTTCCCCACCTTCCCATGTGTTGTTTGCGGATGATATTATGGTATTTCTTCAGGGTAAGCCTTCTCACTTAAGAAATCTAATGTCTTTTATGGATGAATATGCTGTGAATTCTGGGCAGGTGGTCAACCAAGCCAAATCAAACTTACTTTTGGGAAGATATGCTTTGCCAAGGCAGAACAGAACTTGTGGTTTACTTGGAATACGACCAGGACAGTTTCCCTTCACCTATCTCGGTGTTCCCATTTTTATTGGGCATCCGAAATCTGTGCATTTGGTTCCAATTGCAGACAAAGTGAGGTGTAAGCTTAGCTCCTGGAAAGGCAAACAACTGTCGCAAGCAGGCAGACTGCAACTTATATCCTCCGTAATTGAAAGCATCTTGATCTACAGCTTCCACATCTATGAATGGCCAAAGTCCCTTCTTAACAAAGTACAGAGTTGGATGAGAAACTTCTTTTGGAGGGGAGATCCACTTAAGAACGGATCTGCCCTTGTAGCCTGGAGTACGATATGCTTTCCAAAATCTCAAGGAGGGTTGGGTTTAAAGGATCTTTTTGCTTTGAATAGATCATTGTTATTAAAAAGATGTTGGGAGATGGCTTCAAAGGCTTCTACATCAGCGAGGTTCCTTCATGATCGCTTTCTGCAAGTGGGTTTGCACCCTTGTTCGTCTTATAAGAAATCTGCCATTTGGCTTGGCTTAAAAAAATTATGGCCAAGGCTTCTTGCAAGGGTGCAATGGCTCTTGGGAGATGGTTCTACAATAAGGTTTTGGAAAGATAATTGGTTAGGTGAGGCAGTAATTCACTCCACAGACTATGAGGAGGAAGTCAGGAAGCTCCTTAATGACAAGGTTGGTGACTTCATCTTGAATGGTCAGTGGAACCTTCCCCCCAGCTTCTGCAGGGCCTTTCCCCAAGTTGCCCAAGTTATTAATGCAGTCCCCATATCGTCTGATCTTGCCCCGGACCAACTGATCTGGACTGAAACATCATCTGGCACTTTGTCGTCCAAGGAGGCATACCAGGTGTTGTCTCCTCCCATTCCAGCACCTCCTTGGTGTGCGCGGATCTGGCATCAGGCCATCCAACCTCGAAAGAGCATGGTGGCATGGAAAACCCTTCTCAATCGAGTTTCTACCGATGAACGGCTTCAGCGTCGTGGTACTAGGCTCTGTTCAAGATGTTATCTTTGCCGAAGACACAGTGAAACTATTGATCATCTATTTCTTGAGTGTGTGGTTGCCGCGTCCTCTTGGGCTTGGCTCCATCAAATGTTCAGGCTTCTTATCCCTCCAGGTACATCCCTGCCTGACTTGTTTCTTGATGCTACCCTCTCTATGCTTAATCAATCTTCAAAATTGCTATGGTTTATATCTGTCTGCAACTTACTTTGGTGCCTGTGGAGCGAACGTAATAAAAGAAAGTTTGAAGGTGGAGAGTGTTGCCCTTCTAGATTCAAACAGTTCTTCCTACTGTCCATAAAAGAATCTGCAGGTTTAGCTTTTGTCTCCGCCTCTTCTCCCTCAAGTCAGATTCCCATCTTTGGCTACTTGGGCATTTCACCTCTTCTTCCCTCGGCCCCCCGCTTCATTCCAGTGATTTGGCAATCCCCCCTAGAAGCTGGTTTAAAGCTAACTCTGATGGTTCTTACCGGGATCTTAACCATGCTGGCTATGGAGCGGTTTTCCGGAACTGCGATGCGGCCTTCTTGGGTGCTTTTTCTTGCAATGCTCCGGTCTCTTGTGCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

729

Amino Acids

82.23

Weight (kDa)

9.77

Isoelectric Point (pI)

45.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	6 - 227	3.2e-26	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	482 - 565	3.5e-21	zinc-binding in reverse transcriptase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35550
fragaria_vesca	FvH4_1g10280 FvH4_1g10280 FvH4_1g10280 FvH4_1g10280 FvH4_5g03570 FvH4_5g25470 FvH4_5g25470
malus_domestica	MD00G1207300.v1.1 MD02G1114900.v1.1 MD15G1230800.v1.1
prunus_persica	Prupe.5G009600_v2.0.a1 Prupe.5G009600_v2.0.a1 Prupe.7G183300_v2.0.a1 Prupe.7G183300_v2.0.a1 Prupe.7G183300_v2.0.a1
pyrus_communis	pycom02g08980 pycom06g00860 pycom15g20570
rosa_chinensis	RchiOBHm_Chr2g0097121 RchiOBHm_Chr7g0215711
rosa_laevigata	RLG00000016704
rosa_multiflora	Rmu_co8032686.1_g000001 Rmu_sc0000898.1_g000018 Rmu_sc0001182.1_g000004 Rmu_sc0022481.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144960 Rroxscaffold_3G00243910
rosa_rugosa	Rorug02G0064200 Rorug02G0064300 Rorug02G0064300 Rorug07G0156200 Rorug07G0156200
rosa_samantha	Rh2AG111500 Rh2BG113500 Rh2CG115800 Rh2DG114800 Rh7AG293200 Rh7BG285500 Rh7CG313300 Rh7DG296500
rosa_wichuraiana	Rw2G008670 Rw7G024960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1113
AarI	CACCTGC	1 cut(s)	544
Acc36I	ACCTGC	3 cut(s)	274, 544, 1922
AccB1I	GGYRCC	1 cut(s)	1833
AccBSI	CCGCTC	1 cut(s)	2119
AccII	CGCG	2 cut(s)	1504, 1685
AccIII	TCCGGA	1 cut(s)	2126
AciI	CCGC	7 cut(s)	464, 1504, 1683, 1950, 2023, 2119, 2140
AclWI	GGATC	7 cut(s)	62, 323, 899, 928, 993, 1514, 2102
AcoI	YGGCCR	2 cut(s)	845, 1151
AcsI	RAATTY	4 cut(s)	127, 140, 178, 544
AcuI	CTGAAG	2 cut(s)	470, 1574
AfaI	GTAC	5 cut(s)	296, 870, 943, 1603, 1738
AfiI	CCNNNNNNNGG	2 cut(s)	1584, 1982
AflII	CTTAAG	2 cut(s)	505, 911
AgsI	TTSAA	8 cut(s)	809, 1000, 1041, 1309, 1617, 1794, 1868, 1897
AjnI	CCWGG	6 cut(s)	308, 643, 749, 935, 1461, 1732
AjuI	GAANNNNNNNTTGG	2 cut(s)	877, 909
AluBI	AGCT	9 cut(s)	134, 742, 747, 828, 1276, 1335, 1940, 2060, 2071
AluI	AGCT	9 cut(s)	134, 742, 747, 828, 1276, 1335, 1940, 2060, 2071
Alw26I	GTCTC	3 cut(s)	1476, 1951, 2181
AlwI	GGATC	7 cut(s)	62, 323, 899, 928, 993, 1514, 2102
AlwNI	CAGNNNCTG	1 cut(s)	1338
Aor13HI	TCCGGA	1 cut(s)	2126
AoxI	GGCC	7 cut(s)	379, 845, 1151, 1344, 1518, 2016, 2141
ApeKI	GCWGC	1 cut(s)	422
ApoI	RAATTY	4 cut(s)	127, 140, 178, 544
AseI	ATTAAT	1 cut(s)	1371
Asp700I	GAANNNNTTC	1 cut(s)	1587
AspLEI	GCGC	3 cut(s)	41, 427, 1504
AspS9I	GGNCC	4 cut(s)	57, 1344, 1405, 2017
AsuC2I	CCSGG	2 cut(s)	1403, 2092
AsuHPI	GGTGA	5 cut(s)	338, 652, 1241, 1307, 1992
AvaII	GGWCC	2 cut(s)	57, 1405
BalI	TGGCCA	2 cut(s)	847, 1153
BanI	GGYRCC	1 cut(s)	1833
BbsI	GAAGAC	1 cut(s)	1642
BbvI	GCAGC	1 cut(s)	434
BccI	CCATC	7 cut(s)	436, 1027, 1184, 1529, 1713, 1985, 2074
BceAI	ACGGC	1 cut(s)	1601
BcgI	CGANNNNNNTGC	2 cut(s)	685, 719
BciT130I	CCWGG	6 cut(s)	310, 645, 751, 937, 1463, 1734
BclI	TGATCA	1 cut(s)	1654
BcnI	CCSGG	2 cut(s)	1403, 2092
BcoDI	GTCTC	3 cut(s)	1476, 1951, 2181
BfaI	CTAG	4 cut(s)	356, 1605, 1890, 2054
BfmI	CTRYAG	3 cut(s)	823, 1339, 1929
BfoI	RGCGCY	2 cut(s)	42, 428
BfrI	CTTAAG	2 cut(s)	505, 911
BfuAI	ACCTGC	3 cut(s)	274, 544, 1922
BisI	GCNGC	3 cut(s)	423, 1683, 2141
BlpI	GCTNAGC	1 cut(s)	743
BlsI	GCNGC	3 cut(s)	424, 1684, 2142
Bme1390I	CCNGG	8 cut(s)	310, 645, 751, 937, 1403, 1463, 1734, 2092
Bme18I	GGWCC	2 cut(s)	57, 1405
BmgT120I	GGNCC	4 cut(s)	57, 1344, 1405, 2017
BmiI	GGNNCC	6 cut(s)	714, 1064, 1322, 1703, 1835, 2019
BmrFI	CCNGG	8 cut(s)	310, 645, 751, 937, 1403, 1463, 1734, 2092
BmsI	GCATC	6 cut(s)	205, 700, 822, 1522, 1753, 2127
BpiI	GAAGAC	1 cut(s)	1642
BpmI	CTGGAG	3 cut(s)	292, 958, 1716
Bpu1102I	GCTNAGC	1 cut(s)	743
BpuEI	CTTGAG	3 cut(s)	948, 1688, 1948
BpuMI	CCSGG	2 cut(s)	1403, 2092
BsaBI	GATNNNNATC	1 cut(s)	1976
BsaI	GGTCTC	1 cut(s)	2181
BsaJI	CCNNGG	7 cut(s)	309, 605, 1154, 1401, 1449, 1493, 2013
BsaWI	WCCGGW	2 cut(s)	2126, 2172
BsaXI	ACNNNNNCTCC	2 cut(s)	1834, 1864
Bsc4I	CCNNNNNNNGG	2 cut(s)	1584, 1982
Bse1I	ACTGG	2 cut(s)	179, 2033
Bse3DI	GCAATG	3 cut(s)	12, 1181, 2172
Bse8I	GATNNNNATC	1 cut(s)	1976
BseAI	TCCGGA	1 cut(s)	2126
BseBI	CCWGG	6 cut(s)	310, 645, 751, 937, 1463, 1734
BseDI	CCNNGG	7 cut(s)	309, 605, 1154, 1401, 1449, 1493, 2013
BseGI	GGATG	6 cut(s)	472, 535, 691, 885, 1521, 1739
BseJI	GATNNNNATC	1 cut(s)	1976
BseLI	CCNNNNNNNGG	2 cut(s)	1584, 1982
BseMI	GCAATG	3 cut(s)	12, 1181, 2172
BseMII	CTCAG	1 cut(s)	99
BseNI	ACTGG	2 cut(s)	179, 2033
BseRI	GAGGAG	2 cut(s)	1274, 1464
BseXI	GCAGC	1 cut(s)	434
BseYI	CCCAGC	1 cut(s)	1331
Bsh1236I	CGCG	2 cut(s)	1504, 1685
BshFI	GGCC	7 cut(s)	381, 847, 1153, 1346, 1520, 2018, 2143
BshNI	GGYRCC	1 cut(s)	1833
BsiSI	CCGG	4 cut(s)	1403, 2091, 2127, 2173
BslFI	GGGAC	2 cut(s)	838, 1364
BslI	CCNNNNNNNGG	2 cut(s)	1584, 1982
BsmAI	GTCTC	3 cut(s)	1476, 1951, 2181
BsmFI	GGGAC	2 cut(s)	838, 1364
BsnI	GGCC	7 cut(s)	381, 847, 1153, 1346, 1520, 2018, 2143
Bso31I	GGTCTC	1 cut(s)	2181
Bsp13I	TCCGGA	1 cut(s)	2126
Bsp1720I	GCTNAGC	1 cut(s)	743
BspACI	CCGC	7 cut(s)	464, 1504, 1683, 1950, 2023, 2119, 2140
BspANI	GGCC	7 cut(s)	381, 847, 1153, 1346, 1520, 2018, 2143
BspCNI	CTCAG	1 cut(s)	98
BspEI	TCCGGA	1 cut(s)	2126
BspFNI	CGCG	2 cut(s)	1504, 1685
BspHI	TCATGA	1 cut(s)	1069
BspLI	GGNNCC	6 cut(s)	714, 1064, 1322, 1703, 1835, 2019
BspMAI	CTGCAG	2 cut(s)	1343, 1933
BspMI	ACCTGC	3 cut(s)	274, 544, 1922
BspPI	GGATC	7 cut(s)	62, 323, 899, 928, 993, 1514, 2102
BspT107I	GGYRCC	1 cut(s)	1833
BspTI	CTTAAG	2 cut(s)	505, 911
BspTNI	GGTCTC	1 cut(s)	2181
BsrBI	CCGCTC	1 cut(s)	2119
BsrDI	GCAATG	3 cut(s)	12, 1181, 2172
BsrI	ACTGG	2 cut(s)	179, 2033
BssECI	CCNNGG	7 cut(s)	309, 605, 1154, 1401, 1449, 1493, 2013
BssT1I	CCWWGG	4 cut(s)	605, 1154, 1449, 1493
Bst2UI	CCWGG	6 cut(s)	310, 645, 751, 937, 1463, 1734
Bst4CI	ACNGT	7 cut(s)	57, 348, 651, 768, 1643, 1902, 1914
Bst6I	CTCTTC	2 cut(s)	1960, 2010
BstAFI	CTTAAG	2 cut(s)	505, 911
BstC8I	GCNNGC	3 cut(s)	774, 778, 2109
BstDEI	CTNAG	3 cut(s)	85, 371, 743
BstF5I	GGATG	6 cut(s)	472, 535, 691, 885, 1521, 1739
BstFNI	CGCG	2 cut(s)	1504, 1685
BstH2I	RGCGCY	2 cut(s)	42, 428
BstHHI	GCGC	3 cut(s)	41, 427, 1504
BstMAI	GTCTC	3 cut(s)	1476, 1951, 2181
BstMWI	GCNNNNNNNGC	6 cut(s)	932, 1043, 1510, 1842, 1937, 1992
BstNI	CCWGG	6 cut(s)	310, 645, 751, 937, 1463, 1734
BstNSI	RCATGY	1 cut(s)	306
BstSCI	CCNGG	8 cut(s)	308, 643, 749, 935, 1401, 1461, 1732, 2090
BstSFI	CTRYAG	3 cut(s)	823, 1339, 1929
BstUI	CGCG	2 cut(s)	1504, 1685
BstV1I	GCAGC	1 cut(s)	434
BstV2I	GAAGAC	1 cut(s)	1642
BstX2I	RGATCY	5 cut(s)	904, 920, 985, 1506, 2094
BstXI	CCANNNNNNTGG	1 cut(s)	2040
BstYI	RGATCY	5 cut(s)	904, 920, 985, 1506, 2094
BsuRI	GGCC	7 cut(s)	381, 847, 1153, 1346, 1520, 2018, 2143
BtgZI	GCGATG	1 cut(s)	2150
BtsCI	GGATG	6 cut(s)	472, 535, 691, 885, 1521, 1739
BtsIMutI	CAGTG	4 cut(s)	277, 1322, 1648, 2040
BveI	ACCTGC	3 cut(s)	274, 544, 1922
Cac8I	GCNNGC	3 cut(s)	774, 778, 2109
CaiI	CAGNNNCTG	1 cut(s)	1338
CciI	TCATGA	1 cut(s)	1069
CfoI	GCGC	3 cut(s)	41, 427, 1504
Cfr13I	GGNCC	4 cut(s)	57, 1344, 1405, 2017
CseI	GACGC	2 cut(s)	1583, 1674
CsiI	ACCWGGT	1 cut(s)	1461
Csp6I	GTAC	5 cut(s)	295, 869, 942, 1602, 1737
CviAII	CATG	6 cut(s)	303, 452, 1070, 1540, 1548, 2104
CviQI	GTAC	5 cut(s)	295, 869, 942, 1602, 1737
DdeI	CTNAG	3 cut(s)	85, 371, 743
DraI	TTTAAA	2 cut(s)	981, 2067
EaeI	YGGCCR	2 cut(s)	845, 1151
Eam1104I	CTCTTC	2 cut(s)	1960, 2010
EarI	CTCTTC	2 cut(s)	1960, 2010
EciI	GGCGGA	1 cut(s)	1939
Eco130I	CCWWGG	4 cut(s)	605, 1154, 1449, 1493
Eco31I	GGTCTC	1 cut(s)	2181
Eco47I	GGWCC	2 cut(s)	57, 1405
Eco57I	CTGAAG	2 cut(s)	470, 1574
EcoO109I	RGGNCCY	1 cut(s)	1344
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	6 cut(s)	308, 643, 749, 935, 1461, 1732
EcoT14I	CCWWGG	4 cut(s)	605, 1154, 1449, 1493
ErhI	CCWWGG	4 cut(s)	605, 1154, 1449, 1493
FaeI	CATG	6 cut(s)	306, 455, 1073, 1543, 1551, 2107
FalI	AAGNNNNNCTT	2 cut(s)	583, 615
FaqI	GGGAC	2 cut(s)	838, 1364
FatI	CATG	6 cut(s)	302, 451, 1069, 1539, 1547, 2103
FauI	CCCGC	1 cut(s)	2030
FbaI	TGATCA	1 cut(s)	1654
Fnu4HI	GCNGC	3 cut(s)	423, 1683, 2141
FokI	GGATG	6 cut(s)	479, 542, 678, 892, 1508, 1726
Fsp4HI	GCNGC	3 cut(s)	423, 1683, 2141
FspBI	CTAG	4 cut(s)	356, 1605, 1890, 2054
GlaI	GCGC	3 cut(s)	40, 426, 1503
GluI	GCNGC	3 cut(s)	423, 1683, 2141
GsaI	CCCAGC	1 cut(s)	1335
GsuI	CTGGAG	3 cut(s)	292, 958, 1716
HaeII	RGCGCY	2 cut(s)	42, 428
HaeIII	GGCC	7 cut(s)	381, 847, 1153, 1346, 1520, 2018, 2143
HapII	CCGG	4 cut(s)	1403, 2091, 2127, 2173
HgaI	GACGC	2 cut(s)	1583, 1674
HhaI	GCGC	3 cut(s)	41, 427, 1504
Hin1II	CATG	6 cut(s)	306, 455, 1073, 1543, 1551, 2107
Hin6I	GCGC	3 cut(s)	39, 425, 1502
HinP1I	GCGC	3 cut(s)	39, 425, 1502
HincII	GTYRAC	2 cut(s)	229, 562
HindII	GTYRAC	2 cut(s)	229, 562
HindIII	AAGCTT	1 cut(s)	740
HinfI	GANTC	3 cut(s)	1893, 1925, 1972
HpaI	GTTAAC	1 cut(s)	229
HpaII	CCGG	4 cut(s)	1403, 2091, 2127, 2173
HphI	GGTGA	5 cut(s)	338, 652, 1241, 1307, 1992
Hpy166II	GTNNAC	4 cut(s)	97, 229, 562, 629
Hpy188I	TCNGA	5 cut(s)	88, 696, 1393, 1971, 2079
Hpy8I	GTNNAC	4 cut(s)	97, 229, 562, 629
Hpy99I	CGWCG	1 cut(s)	1599
HpyCH4III	ACNGT	7 cut(s)	57, 348, 651, 768, 1643, 1902, 1914
HpyCH4IV	ACGT	1 cut(s)	1849
HpyF10VI	GCNNNNNNNGC	6 cut(s)	932, 1043, 1510, 1842, 1937, 1992
HpyF3I	CTNAG	3 cut(s)	85, 371, 743
HpySE526I	ACGT	1 cut(s)	1849
Hsp92II	CATG	6 cut(s)	306, 455, 1073, 1543, 1551, 2107
HspAI	GCGC	3 cut(s)	39, 425, 1502
Kpn2I	TCCGGA	1 cut(s)	2126
Ksp22I	TGATCA	1 cut(s)	1654
KspAI	GTTAAC	1 cut(s)	229
LmnI	GCTCC	7 cut(s)	311, 752, 1281, 1707, 1842, 2116, 2175
Lsp1109I	GCAGC	1 cut(s)	434
LweI	GCATC	6 cut(s)	205, 700, 822, 1522, 1753, 2127
MabI	ACCWGGT	1 cut(s)	1461
MaeI	CTAG	4 cut(s)	356, 1605, 1890, 2054
MaeII	ACGT	1 cut(s)	1849
MaeIII	GTNAC	1 cut(s)	1295
MbiI	CCGCTC	1 cut(s)	2119
MfeI	CAATTG	2 cut(s)	417, 717
MflI	RGATCY	5 cut(s)	904, 920, 985, 1506, 2094
MlsI	TGGCCA	2 cut(s)	847, 1153
MluNI	TGGCCA	2 cut(s)	847, 1153
MmeI	TCCRAC	2 cut(s)	857, 1549
Mox20I	TGGCCA	2 cut(s)	847, 1153
MroI	TCCGGA	1 cut(s)	2126
MroXI	GAANNNNTTC	1 cut(s)	1587
MscI	TGGCCA	2 cut(s)	847, 1153
MslI	CAYNNNNRTG	2 cut(s)	837, 2033
Msp20I	TGGCCA	2 cut(s)	847, 1153
MspCI	CTTAAG	2 cut(s)	505, 911
MspI	CCGG	4 cut(s)	1403, 2091, 2127, 2173
MspR9I	CCNGG	8 cut(s)	310, 645, 751, 937, 1403, 1463, 1734, 2092
MunI	CAATTG	2 cut(s)	417, 717
MvaI	CCWGG	6 cut(s)	310, 645, 751, 937, 1463, 1734
MvnI	CGCG	2 cut(s)	1504, 1685
MwoI	GCNNNNNNNGC	6 cut(s)	932, 1043, 1510, 1842, 1937, 1992
NciI	CCSGG	2 cut(s)	1403, 2092
NlaIII	CATG	6 cut(s)	306, 455, 1073, 1543, 1551, 2107
NlaIV	GGNNCC	6 cut(s)	714, 1064, 1322, 1703, 1835, 2019
NmeAIII	GCCGAG	1 cut(s)	1994
NmuCI	GTSAC	1 cut(s)	1295
NspI	RCATGY	1 cut(s)	306
PagI	TCATGA	1 cut(s)	1069
PaqCI	CACCTGC	1 cut(s)	544
PcsI	WCGNNNNNNNCGW	2 cut(s)	196, 1591
PdmI	GAANNNNTTC	1 cut(s)	1587
PfeI	GAWTC	3 cut(s)	1893, 1925, 1972
PfoI	TCCNGGA	1 cut(s)	749
PkrI	GCNGC	3 cut(s)	424, 1684, 2142
PshBI	ATTAAT	1 cut(s)	1371
PsiI	TTATAA	1 cut(s)	1113
Psp6I	CCWGG	6 cut(s)	308, 643, 749, 935, 1461, 1732
PspFI	CCCAGC	1 cut(s)	1331
PspGI	CCWGG	6 cut(s)	308, 643, 749, 935, 1461, 1732
PspN4I	GGNNCC	6 cut(s)	714, 1064, 1322, 1703, 1835, 2019
PspPI	GGNCC	4 cut(s)	57, 1344, 1405, 2017
PstI	CTGCAG	2 cut(s)	1343, 1933
PstNI	CAGNNNCTG	1 cut(s)	1338
PsuI	RGATCY	5 cut(s)	904, 920, 985, 1506, 2094
RsaI	GTAC	5 cut(s)	296, 870, 943, 1603, 1738
RsaNI	GTAC	5 cut(s)	295, 869, 942, 1602, 1737
RseI	CAYNNNNRTG	2 cut(s)	837, 2033
SatI	GCNGC	3 cut(s)	423, 1683, 2141
Sau96I	GGNCC	4 cut(s)	57, 1344, 1405, 2017
ScrFI	CCNGG	8 cut(s)	310, 645, 751, 937, 1403, 1463, 1734, 2092
SexAI	ACCWGGT	1 cut(s)	1461
SfaNI	GCATC	6 cut(s)	205, 700, 822, 1522, 1753, 2127
SfcI	CTRYAG	3 cut(s)	823, 1339, 1929
SinI	GGWCC	2 cut(s)	57, 1405
SmiMI	CAYNNNNRTG	2 cut(s)	837, 2033
SmlI	CTYRAG	5 cut(s)	505, 911, 963, 1667, 1963
SmoI	CTYRAG	5 cut(s)	505, 911, 963, 1667, 1963
SsiI	CCGC	7 cut(s)	464, 1504, 1683, 1950, 2023, 2119, 2140
SspMI	CTAG	4 cut(s)	356, 1605, 1890, 2054
StyD4I	CCNGG	8 cut(s)	308, 643, 749, 935, 1401, 1461, 1732, 2090
StyI	CCWWGG	4 cut(s)	605, 1154, 1449, 1493
TaaI	ACNGT	7 cut(s)	57, 348, 651, 768, 1643, 1902, 1914
TaiI	ACGT	1 cut(s)	1852
TaqI	TCGA	2 cut(s)	1531, 1567
TatI	WGTACW	1 cut(s)	868
TauI	GCSGC	2 cut(s)	1685, 2143
TfiI	GAWTC	3 cut(s)	1893, 1925, 1972
TscAI	CASTG	4 cut(s)	277, 1322, 1648, 2040
TseFI	GTSAC	1 cut(s)	1295
TseI	GCWGC	1 cut(s)	422
Tsp45I	GTSAC	1 cut(s)	1295
TspDTI	ATGAA	7 cut(s)	34, 546, 855, 1058, 1291, 1596, 2017
TspGWI	ACGGA	4 cut(s)	188, 308, 790, 933
TspRI	CASTG	4 cut(s)	277, 1322, 1648, 2040
Vha464I	CTTAAG	2 cut(s)	505, 911
VpaK11BI	GGWCC	2 cut(s)	57, 1405
VspI	ATTAAT	1 cut(s)	1371
XapI	RAATTY	4 cut(s)	127, 140, 178, 544
XbaI	TCTAGA	1 cut(s)	1889
XceI	RCATGY	1 cut(s)	306
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1491, 2110
XmnI	GAANNNNTTC	1 cut(s)	1587
XspI	CTAG	4 cut(s)	356, 1605, 1890, 2054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.