transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 2306 |
| AccB1I | GGYRCC | 1 cut(s) | 2306 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2022 |
| AccII | CGCG | 2 cut(s) | 1731, 2574 |
| AccIII | TCCGGA | 1 cut(s) | 970 |
| AciI | CCGC | 2 cut(s) | 1731, 2414 |
| AcoI | YGGCCR | 1 cut(s) | 1972 |
| AcsI | RAATTY | 8 cut(s) | 225, 269, 382, 530, 723, 795, 1375, 1601 |
| AcuI | CTGAAG | 1 cut(s) | 1358 |
| AfaI | GTAC | 6 cut(s) | 40, 1354, 1737, 1792, 1869, 2308 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1564, 2022 |
| AflIII | ACRYGT | 1 cut(s) | 1745 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 238 |
| AhlI | ACTAGT | 1 cut(s) | 35 |
| AjnI | CCWGG | 1 cut(s) | 1528 |
| Alw21I | GWGCWC | 1 cut(s) | 109 |
| Alw26I | GTCTC | 6 cut(s) | 140, 258, 1578, 1994, 2261, 2563 |
| Ama87I | CYCGRG | 2 cut(s) | 861, 2108 |
| Aor13HI | TCCGGA | 1 cut(s) | 970 |
| AoxI | GGCC | 2 cut(s) | 1972, 2513 |
| ApeKI | GCWGC | 7 cut(s) | 154, 157, 782, 1037, 1622, 2009, 2428 |
| ApoI | RAATTY | 8 cut(s) | 225, 269, 382, 530, 723, 795, 1375, 1601 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2270 |
| Asp718I | GGTACC | 1 cut(s) | 2306 |
| AspA2I | CCTAGG | 1 cut(s) | 2516 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 3 cut(s) | 240, 1457, 2185 |
| AsuHPI | GGTGA | 5 cut(s) | 769, 803, 908, 1696, 2362 |
| AsuII | TTCGAA | 2 cut(s) | 587, 674 |
| AvaI | CYCGRG | 2 cut(s) | 861, 2108 |
| AvaII | GGWCC | 3 cut(s) | 240, 1457, 2185 |
| AvrII | CCTAGG | 1 cut(s) | 2516 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2290, 2323 |
| BalI | TGGCCA | 1 cut(s) | 1974 |
| BanI | GGYRCC | 1 cut(s) | 2306 |
| BanII | GRGCYC | 2 cut(s) | 109, 409 |
| BauI | CACGAG | 1 cut(s) | 1309 |
| BbsI | GAAGAC | 1 cut(s) | 837 |
| Bbv12I | GWGCWC | 1 cut(s) | 109 |
| BbvCI | CCTCAGC | 1 cut(s) | 957 |
| BbvI | GCAGC | 7 cut(s) | 166, 169, 769, 1024, 1609, 2021, 2415 |
| BccI | CCATC | 9 cut(s) | 530, 635, 713, 748, 1310, 1730, 1858, 2653, 2663 |
| BceAI | ACGGC | 1 cut(s) | 1505 |
| BciT130I | CCWGG | 1 cut(s) | 1530 |
| BclI | TGATCA | 1 cut(s) | 565 |
| BcoDI | GTCTC | 6 cut(s) | 140, 258, 1578, 1994, 2261, 2563 |
| BcuI | ACTAGT | 1 cut(s) | 35 |
| BfmI | CTRYAG | 3 cut(s) | 1356, 1674, 2564 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BglII | AGATCT | 2 cut(s) | 1894, 2194 |
| BisI | GCNGC | 7 cut(s) | 155, 158, 783, 1038, 1623, 2010, 2429 |
| BlnI | CCTAGG | 1 cut(s) | 2516 |
| BlsI | GCNGC | 7 cut(s) | 156, 159, 784, 1039, 1624, 2011, 2430 |
| BmcAI | AGTACT | 3 cut(s) | 40, 1354, 1869 |
| Bme1390I | CCNGG | 1 cut(s) | 1530 |
| Bme18I | GGWCC | 3 cut(s) | 240, 1457, 2185 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 238 |
| BmeT110I | CYCGRG | 2 cut(s) | 861, 2108 |
| BmgT120I | GGNCC | 3 cut(s) | 240, 1457, 2185 |
| BmiI | GGNNCC | 8 cut(s) | 256, 834, 1119, 1458, 1527, 1990, 2187, 2308 |
| BmrFI | CCNGG | 1 cut(s) | 1530 |
| BmrI | ACTGGG | 1 cut(s) | 1794 |
| BmsI | GCATC | 6 cut(s) | 971, 1002, 1054, 1492, 2099, 2596 |
| BmuI | ACTGGG | 1 cut(s) | 1794 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1028 |
| BpiI | GAAGAC | 1 cut(s) | 837 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1109, 1141 |
| BpmI | CTGGAG | 3 cut(s) | 1191, 1884, 2695 |
| Bpu10I | CCTNAGC | 2 cut(s) | 957, 992 |
| Bpu14I | TTCGAA | 2 cut(s) | 587, 674 |
| BpuEI | CTTGAG | 1 cut(s) | 1757 |
| BsaAI | YACGTR | 1 cut(s) | 1748 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1721 |
| BsaI | GGTCTC | 2 cut(s) | 1994, 2261 |
| BsaJI | CCNNGG | 8 cut(s) | 275, 401, 881, 1460, 1521, 2004, 2406, 2516 |
| BsaWI | WCCGGW | 1 cut(s) | 970 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 965, 995, 1164, 1194 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1564, 2022 |
| Bse118I | RCCGGY | 1 cut(s) | 1040 |
| Bse1I | ACTGG | 9 cut(s) | 350, 1174, 1276, 1789, 1867, 2124, 2336, 2712, 2807 |
| Bse3DI | GCAATG | 3 cut(s) | 1490, 1843, 2776 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1721 |
| BseAI | TCCGGA | 1 cut(s) | 970 |
| BseBI | CCWGG | 1 cut(s) | 1530 |
| BseDI | CCNNGG | 8 cut(s) | 275, 401, 881, 1460, 1521, 2004, 2406, 2516 |
| BseGI | GGATG | 9 cut(s) | 962, 1017, 1069, 1096, 1348, 1507, 2209, 2230, 2664 |
| BseJI | GATNNNNATC | 1 cut(s) | 1721 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1564, 2022 |
| BseMI | GCAATG | 3 cut(s) | 1490, 1843, 2776 |
| BseMII | CTCAG | 7 cut(s) | 86, 164, 948, 1571, 2142, 2272, 2610 |
| BseNI | ACTGG | 9 cut(s) | 350, 1174, 1276, 1789, 1867, 2124, 2336, 2712, 2807 |
| BseRI | GAGGAG | 5 cut(s) | 60, 764, 1130, 1894, 1925 |
| BseXI | GCAGC | 7 cut(s) | 166, 169, 769, 1024, 1609, 2021, 2415 |
| BseYI | CCCAGC | 1 cut(s) | 2188 |
| BsgI | GTGCAG | 2 cut(s) | 1608, 2192 |
| Bsh1236I | CGCG | 2 cut(s) | 1731, 2574 |
| BshFI | GGCC | 2 cut(s) | 1974, 2515 |
| BshNI | GGYRCC | 1 cut(s) | 2306 |
| BsiHKAI | GWGCWC | 1 cut(s) | 109 |
| BsiHKCI | CYCGRG | 2 cut(s) | 861, 2108 |
| BsiSI | CCGG | 3 cut(s) | 971, 1041, 2201 |
| BslFI | GGGAC | 2 cut(s) | 723, 2171 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1564, 2022 |
| BsmAI | GTCTC | 6 cut(s) | 140, 258, 1578, 1994, 2261, 2563 |
| BsmBI | CGTCTC | 1 cut(s) | 2563 |
| BsmFI | GGGAC | 2 cut(s) | 723, 2171 |
| BsnI | GGCC | 2 cut(s) | 1974, 2515 |
| Bso31I | GGTCTC | 2 cut(s) | 1994, 2261 |
| BsoBI | CYCGRG | 2 cut(s) | 861, 2108 |
| Bsp119I | TTCGAA | 2 cut(s) | 587, 674 |
| Bsp1286I | GDGCHC | 2 cut(s) | 109, 409 |
| Bsp13I | TCCGGA | 1 cut(s) | 970 |
| Bsp143I | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| Bsp19I | CCATGG | 2 cut(s) | 275, 2004 |
| BspACI | CCGC | 2 cut(s) | 1731, 2414 |
| BspANI | GGCC | 2 cut(s) | 1974, 2515 |
| BspCNI | CTCAG | 7 cut(s) | 85, 163, 949, 1572, 2143, 2271, 2609 |
| BspEI | TCCGGA | 1 cut(s) | 970 |
| BspFNI | CGCG | 2 cut(s) | 1731, 2574 |
| BspLI | GGNNCC | 8 cut(s) | 256, 834, 1119, 1458, 1527, 1990, 2187, 2308 |
| BspMAI | CTGCAG | 1 cut(s) | 1360 |
| BspT104I | TTCGAA | 2 cut(s) | 587, 674 |
| BspT107I | GGYRCC | 1 cut(s) | 2306 |
| BspTNI | GGTCTC | 2 cut(s) | 1994, 2261 |
| BsrDI | GCAATG | 3 cut(s) | 1490, 1843, 2776 |
| BsrFI | RCCGGY | 1 cut(s) | 1040 |
| BsrI | ACTGG | 9 cut(s) | 350, 1174, 1276, 1789, 1867, 2124, 2336, 2712, 2807 |
| BssAI | RCCGGY | 1 cut(s) | 1040 |
| BssECI | CCNNGG | 8 cut(s) | 275, 401, 881, 1460, 1521, 2004, 2406, 2516 |
| BssMI | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| BssSI | CACGAG | 1 cut(s) | 1309 |
| BssT1I | CCWWGG | 6 cut(s) | 275, 401, 881, 2004, 2406, 2516 |
| Bst2BI | CACGAG | 1 cut(s) | 1309 |
| Bst2UI | CCWGG | 1 cut(s) | 1530 |
| Bst4CI | ACNGT | 5 cut(s) | 136, 506, 1464, 2720, 2783 |
| Bst6I | CTCTTC | 6 cut(s) | 55, 94, 188, 980, 2508, 2718 |
| BstBAI | YACGTR | 1 cut(s) | 1748 |
| BstBI | TTCGAA | 2 cut(s) | 587, 674 |
| BstC8I | GCNNGC | 2 cut(s) | 1614, 2541 |
| BstDEI | CTNAG | 8 cut(s) | 72, 150, 957, 992, 1580, 2151, 2258, 2596 |
| BstDSI | CCRYGG | 4 cut(s) | 275, 1460, 1521, 2004 |
| BstF5I | GGATG | 9 cut(s) | 962, 1017, 1069, 1096, 1348, 1507, 2209, 2230, 2664 |
| BstFNI | CGCG | 2 cut(s) | 1731, 2574 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 7 cut(s) | 568, 1193, 1432, 1897, 1958, 2197, 2209 |
| BstMAI | GTCTC | 6 cut(s) | 140, 258, 1578, 1994, 2261, 2563 |
| BstMBI | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 404, 1355, 1622, 1718, 2156, 2389 |
| BstNI | CCWGG | 1 cut(s) | 1530 |
| BstNSI | RCATGY | 2 cut(s) | 102, 2323 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1028 |
| BstSCI | CCNGG | 1 cut(s) | 1528 |
| BstSFI | CTRYAG | 3 cut(s) | 1356, 1674, 2564 |
| BstUI | CGCG | 2 cut(s) | 1731, 2574 |
| BstV1I | GCAGC | 7 cut(s) | 166, 169, 769, 1024, 1609, 2021, 2415 |
| BstV2I | GAAGAC | 1 cut(s) | 837 |
| BstX2I | RGATCY | 2 cut(s) | 1894, 2194 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 250 |
| BstYI | RGATCY | 2 cut(s) | 1894, 2194 |
| BsuRI | GGCC | 2 cut(s) | 1974, 2515 |
| BtgI | CCRYGG | 4 cut(s) | 275, 1460, 1521, 2004 |
| BtgZI | GCGATG | 1 cut(s) | 2076 |
| BtsCI | GGATG | 9 cut(s) | 962, 1017, 1069, 1096, 1348, 1507, 2209, 2230, 2664 |
| BtsIMutI | CAGTG | 5 cut(s) | 30, 80, 2329, 2719, 2725 |
| Cac8I | GCNNGC | 2 cut(s) | 1614, 2541 |
| CfoI | GCGC | 1 cut(s) | 7 |
| Cfr10I | RCCGGY | 1 cut(s) | 1040 |
| Cfr13I | GGNCC | 3 cut(s) | 240, 1457, 2185 |
| CseI | GACGC | 1 cut(s) | 2580 |
| Csp6I | GTAC | 6 cut(s) | 39, 1353, 1736, 1791, 1868, 2307 |
| CviQI | GTAC | 6 cut(s) | 39, 1353, 1736, 1791, 1868, 2307 |
| DdeI | CTNAG | 8 cut(s) | 72, 150, 957, 992, 1580, 2151, 2258, 2596 |
| DpnI | GATC | 7 cut(s) | 567, 1192, 1431, 1896, 1957, 2196, 2208 |
| DpnII | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| DriI | GACNNNNNGTC | 1 cut(s) | 238 |
| EaeI | YGGCCR | 1 cut(s) | 1972 |
| Eam1104I | CTCTTC | 6 cut(s) | 55, 94, 188, 980, 2508, 2718 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 238 |
| EarI | CTCTTC | 6 cut(s) | 55, 94, 188, 980, 2508, 2718 |
| Ecl136II | GAGCTC | 1 cut(s) | 107 |
| Eco130I | CCWWGG | 6 cut(s) | 275, 401, 881, 2004, 2406, 2516 |
| Eco147I | AGGCCT | 1 cut(s) | 2515 |
| Eco24I | GRGCYC | 2 cut(s) | 109, 409 |
| Eco31I | GGTCTC | 2 cut(s) | 1994, 2261 |
| Eco32I | GATATC | 1 cut(s) | 1535 |
| Eco47I | GGWCC | 3 cut(s) | 240, 1457, 2185 |
| Eco53kI | GAGCTC | 1 cut(s) | 107 |
| Eco57I | CTGAAG | 1 cut(s) | 1358 |
| Eco88I | CYCGRG | 2 cut(s) | 861, 2108 |
| EcoICRI | GAGCTC | 1 cut(s) | 107 |
| EcoRII | CCWGG | 1 cut(s) | 1528 |
| EcoRV | GATATC | 1 cut(s) | 1535 |
| EcoT14I | CCWWGG | 6 cut(s) | 275, 401, 881, 2004, 2406, 2516 |
| EcoT38I | GRGCYC | 2 cut(s) | 109, 409 |
| ErhI | CCWWGG | 6 cut(s) | 275, 401, 881, 2004, 2406, 2516 |
| Esp3I | CGTCTC | 1 cut(s) | 2563 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 197, 229, 2733, 2765 |
| FaqI | GGGAC | 2 cut(s) | 723, 2171 |
| FauNDI | CATATG | 1 cut(s) | 1281 |
| FbaI | TGATCA | 1 cut(s) | 565 |
| Fnu4HI | GCNGC | 7 cut(s) | 155, 158, 783, 1038, 1623, 2010, 2429 |
| FokI | GGATG | 9 cut(s) | 949, 1024, 1076, 1103, 1355, 1514, 2216, 2237, 2671 |
| FriOI | GRGCYC | 2 cut(s) | 109, 409 |
| Fsp4HI | GCNGC | 7 cut(s) | 155, 158, 783, 1038, 1623, 2010, 2429 |
| GlaI | GCGC | 1 cut(s) | 6 |
| GluI | GCNGC | 7 cut(s) | 155, 158, 783, 1038, 1623, 2010, 2429 |
| GsaI | CCCAGC | 1 cut(s) | 2192 |
| GsuI | CTGGAG | 3 cut(s) | 1191, 1884, 2695 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 2 cut(s) | 1974, 2515 |
| HapII | CCGG | 3 cut(s) | 971, 1041, 2201 |
| HgaI | GACGC | 1 cut(s) | 2580 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HindIII | AAGCTT | 3 cut(s) | 211, 679, 1962 |
| HpaII | CCGG | 3 cut(s) | 971, 1041, 2201 |
| HphI | GGTGA | 5 cut(s) | 769, 803, 908, 1696, 2362 |
| Hpy166II | GTNNAC | 5 cut(s) | 28, 1277, 1460, 1793, 2299 |
| Hpy8I | GTNNAC | 5 cut(s) | 28, 1277, 1460, 1793, 2299 |
| Hpy99I | CGWCG | 1 cut(s) | 22 |
| HpyCH4III | ACNGT | 5 cut(s) | 136, 506, 1464, 2720, 2783 |
| HpyCH4IV | ACGT | 1 cut(s) | 1747 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 404, 1355, 1622, 1718, 2156, 2389 |
| HpyF3I | CTNAG | 8 cut(s) | 72, 150, 957, 992, 1580, 2151, 2258, 2596 |
| HpySE526I | ACGT | 1 cut(s) | 1747 |
| HspAI | GCGC | 1 cut(s) | 5 |
| Kpn2I | TCCGGA | 1 cut(s) | 970 |
| KpnI | GGTACC | 1 cut(s) | 2310 |
| Ksp22I | TGATCA | 1 cut(s) | 565 |
| Kzo9I | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| LmnI | GCTCC | 5 cut(s) | 73, 403, 973, 1034, 1117 |
| Lsp1109I | GCAGC | 7 cut(s) | 166, 169, 769, 1024, 1609, 2021, 2415 |
| LweI | GCATC | 6 cut(s) | 971, 1002, 1054, 1492, 2099, 2596 |
| MaeII | ACGT | 1 cut(s) | 1747 |
| MaeIII | GTNAC | 4 cut(s) | 500, 1284, 1858, 2714 |
| MalI | GATC | 7 cut(s) | 567, 1192, 1431, 1896, 1957, 2196, 2208 |
| MboI | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| MfeI | CAATTG | 3 cut(s) | 636, 1976, 2556 |
| MflI | RGATCY | 2 cut(s) | 1894, 2194 |
| MhlI | GDGCHC | 2 cut(s) | 109, 409 |
| MlsI | TGGCCA | 1 cut(s) | 1974 |
| MluNI | TGGCCA | 1 cut(s) | 1974 |
| MlyI | GAGTC | 3 cut(s) | 142, 1286, 1958 |
| MmeI | TCCRAC | 2 cut(s) | 1012, 1924 |
| Mox20I | TGGCCA | 1 cut(s) | 1974 |
| MroI | TCCGGA | 1 cut(s) | 970 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2270 |
| MscI | TGGCCA | 1 cut(s) | 1974 |
| MseI | TTAA | 6 cut(s) | 426, 773, 1131, 1467, 2082, 2510 |
| MslI | CAYNNNNRTG | 2 cut(s) | 248, 693 |
| Msp20I | TGGCCA | 1 cut(s) | 1974 |
| MspA1I | CMGCKG | 1 cut(s) | 2035 |
| MspI | CCGG | 3 cut(s) | 971, 1041, 2201 |
| MspR9I | CCNGG | 1 cut(s) | 1530 |
| MunI | CAATTG | 3 cut(s) | 636, 1976, 2556 |
| MvaI | CCWGG | 1 cut(s) | 1530 |
| MvnI | CGCG | 2 cut(s) | 1731, 2574 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 404, 1355, 1622, 1718, 2156, 2389 |
| NcoI | CCATGG | 2 cut(s) | 275, 2004 |
| NdeI | CATATG | 1 cut(s) | 1281 |
| NdeII | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| NlaIV | GGNNCC | 8 cut(s) | 256, 834, 1119, 1458, 1527, 1990, 2187, 2308 |
| NmeAIII | GCCGAG | 1 cut(s) | 2023 |
| NmuCI | GTSAC | 1 cut(s) | 2714 |
| NspI | RCATGY | 2 cut(s) | 102, 2323 |
| NspV | TTCGAA | 2 cut(s) | 587, 674 |
| PaeR7I | CTCGAG | 2 cut(s) | 861, 2108 |
| PceI | AGGCCT | 1 cut(s) | 2515 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 859 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2270 |
| PfeI | GAWTC | 8 cut(s) | 168, 293, 326, 488, 857, 2069, 2521, 2699 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2022 |
| PfoI | TCCNGGA | 1 cut(s) | 1528 |
| PkrI | GCNGC | 7 cut(s) | 156, 159, 784, 1039, 1624, 2011, 2430 |
| PleI | GAGTC | 3 cut(s) | 142, 1286, 1957 |
| PpsI | GAGTC | 3 cut(s) | 142, 1286, 1957 |
| Ppu21I | YACGTR | 1 cut(s) | 1748 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1028 |
| Psp124BI | GAGCTC | 1 cut(s) | 109 |
| Psp6I | CCWGG | 1 cut(s) | 1528 |
| PspFI | CCCAGC | 1 cut(s) | 2188 |
| PspGI | CCWGG | 1 cut(s) | 1528 |
| PspN4I | GGNNCC | 8 cut(s) | 256, 834, 1119, 1458, 1527, 1990, 2187, 2308 |
| PspPI | GGNCC | 3 cut(s) | 240, 1457, 2185 |
| PstI | CTGCAG | 1 cut(s) | 1360 |
| PsuI | RGATCY | 2 cut(s) | 1894, 2194 |
| PvuII | CAGCTG | 1 cut(s) | 2035 |
| RsaI | GTAC | 6 cut(s) | 40, 1354, 1737, 1792, 1869, 2308 |
| RsaNI | GTAC | 6 cut(s) | 39, 1353, 1736, 1791, 1868, 2307 |
| RseI | CAYNNNNRTG | 2 cut(s) | 248, 693 |
| SacI | GAGCTC | 1 cut(s) | 109 |
| SaqAI | TTAA | 6 cut(s) | 426, 773, 1131, 1467, 2082, 2510 |
| SatI | GCNGC | 7 cut(s) | 155, 158, 783, 1038, 1623, 2010, 2429 |
| Sau3AI | GATC | 7 cut(s) | 565, 1190, 1429, 1894, 1955, 2194, 2206 |
| Sau96I | GGNCC | 3 cut(s) | 240, 1457, 2185 |
| ScaI | AGTACT | 3 cut(s) | 40, 1354, 1869 |
| SchI | GAGTC | 3 cut(s) | 142, 1286, 1958 |
| ScrFI | CCNGG | 1 cut(s) | 1530 |
| SduI | GDGCHC | 2 cut(s) | 109, 409 |
| SfaNI | GCATC | 6 cut(s) | 971, 1002, 1054, 1492, 2099, 2596 |
| SfcI | CTRYAG | 3 cut(s) | 1356, 1674, 2564 |
| Sfr274I | CTCGAG | 2 cut(s) | 861, 2108 |
| SfuI | TTCGAA | 2 cut(s) | 587, 674 |
| SinI | GGWCC | 3 cut(s) | 240, 1457, 2185 |
| SlaI | CTCGAG | 2 cut(s) | 861, 2108 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 248, 693 |
| SmlI | CTYRAG | 3 cut(s) | 861, 1772, 2108 |
| SmoI | CTYRAG | 3 cut(s) | 861, 1772, 2108 |
| SpeI | ACTAGT | 1 cut(s) | 35 |
| SseBI | AGGCCT | 1 cut(s) | 2515 |
| SsiI | CCGC | 2 cut(s) | 1731, 2414 |
| SstI | GAGCTC | 1 cut(s) | 109 |
| StuI | AGGCCT | 1 cut(s) | 2515 |
| StyD4I | CCNGG | 1 cut(s) | 1528 |
| StyI | CCWWGG | 6 cut(s) | 275, 401, 881, 2004, 2406, 2516 |
| TaaI | ACNGT | 5 cut(s) | 136, 506, 1464, 2720, 2783 |
| TaiI | ACGT | 1 cut(s) | 1750 |
| TaqI | TCGA | 4 cut(s) | 587, 674, 862, 2109 |
| TaqII | GACCGA | 1 cut(s) | 2541 |
| TatI | WGTACW | 4 cut(s) | 38, 1352, 1735, 1867 |
| TfiI | GAWTC | 8 cut(s) | 168, 293, 326, 488, 857, 2069, 2521, 2699 |
| Tru1I | TTAA | 6 cut(s) | 426, 773, 1131, 1467, 2082, 2510 |
| Tru9I | TTAA | 6 cut(s) | 426, 773, 1131, 1467, 2082, 2510 |
| TscAI | CASTG | 5 cut(s) | 30, 80, 2336, 2719, 2725 |
| TseFI | GTSAC | 1 cut(s) | 2714 |
| TseI | GCWGC | 7 cut(s) | 154, 157, 782, 1037, 1622, 2009, 2428 |
| Tsp45I | GTSAC | 1 cut(s) | 2714 |
| TspDTI | ATGAA | 9 cut(s) | 114, 260, 474, 837, 1107, 1151, 1767, 2279, 2802 |
| TspGWI | ACGGA | 3 cut(s) | 1227, 1595, 2237 |
| TspRI | CASTG | 5 cut(s) | 30, 80, 2336, 2719, 2725 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2022 |
| VpaK11BI | GGWCC | 3 cut(s) | 240, 1457, 2185 |
| XapI | RAATTY | 8 cut(s) | 225, 269, 382, 530, 723, 795, 1375, 1601 |
| XbaI | TCTAGA | 2 cut(s) | 1802, 2440 |
| XceI | RCATGY | 2 cut(s) | 102, 2323 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1982 |
| XhoI | CTCGAG | 2 cut(s) | 861, 2108 |
| XmaJI | CCTAGG | 1 cut(s) | 2516 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2270 |
| ZrmI | AGTACT | 3 cut(s) | 40, 1354, 1869 |