Rorug02G0105100

HVA22-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001583
Physical Location & Seq
Reverse (-)
8948089 .. 8951883
3795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0105100.1

Sequence Viewer

Length: 2250 bp
ATGTATACATGTAATTTTTGGATCAAAAGGATGAGTAAACTATGCCCATTTGGTAAAATGGAGTTTGAGCCATTGAGCTTGGGGAATGAGGTTGTTGAATTTGACCTGATGGGTCTTGGTGACATTGACCACCCTGTTGTTGACATTGACATTTTTGACGATTCTCTTGCTGTTGTTGGTTCCAATCCCATTGCCCTACCTTACATTATCGAAGGAGAGACTAATCTCGAGCCGTATGAGGGGATGGAGTTTGAGTCAGAAGAGGCTGCCAAGGCCTTTTACAACTCCTATGCTCGCCGCACTGGCTTCAGCACTCGGGTCAGCATGTCTCGCCGCTCCAGGCGGGATGGTGCCATCATCCAGAGGTCTTTTGTTTGTGCCAAGGAGGGTTTTCGTATGGATAAGCATGAAAAGCGTGGTCCTGAGTGTGATGGCAGGGTAAAGCGCCCGCGTGCTGAGACTAGAGTTGGTTGTAAGGCAATGTTGGTGGTCAAGATTCAAGACTCTGGGGGATGGGTTGTGTCATGTTTTGTTAAGGAACATAACCATGAGCTGGTTCCCCCGGATAAGGTGCATTGCCTCCGCTCTCATCGTCACGTCTCTGGTTCTGCAAAGTCTTTGATTGATACCTTGCAGGGTGCTGGGATTGGGCCTAGTGGAATTATGTCCGCCCTCATCAAAGAATATGGTGATATTAGCAAAGTTGGCTTCACGGAGCGTGACTGCAGGAATTACATGAGGAGTAGTCGGCAAAGGACCCTAGGAGGTGACACTCGGGTGCTCTTGGATTACTTGAAGAACAGGCAAGCCAACAACCCAGCATTTTTCTATTCTGTGCAGGGTGATCAAGACCAGTGCATGAGCAATATCTTCTGGGCTGATCCTAAGGCAAGGAGTGATTACACTTACTTTGGTGATACTGTTACCTTTGACACAACTTACAGGTCAAACCGGTATAGATTACCTTTTGCACCTTTCACCGGGGTTAACCATCATGGACAGCCTGTGTTGTTTGGGTGTGCCCTCTTGGTAAATGAATCTGAGGCATCGTTTCTATGGCTTTTTAAAACATGGCTTATGGCAATGTCTGGCCGACCTCCAGTCTCAATCACTACTGATCATGATAGGGTGATCCGCATGGCTATCACCCAGGTTTTTCCTGAGACTCGACACCGCTTCTGCAAGTGGCATATTTTTAAAGAGTGCCAAGAGAAACTGTCCCATGTACTTTCTGAGCATTCCAACTTTGAAGCAGAGCTTCACAAATGTGTCGACCTGACTGAATCTATTGAAGAGTTTGAGTCTAGTTGGTTGTCTCTAATTGAAAAATATGATCTCAGAGATCATGAATGGCTTCAAGGGATATATGCTGATCGAAGGCAGTGGGTACCTATATACTTGAGGGACACCTTCTTTGCAGAAATGTCTATAACACAACGTAGCGATATCATGAACTCATATTTTGATGGATATGTCAATGCGTCAACATCTCTACAGCTGTTCGTTAAGCAGTATGAGAAAGCTCTTGAAAGTCGGTATGAGAAAGAAGTGAAGGCAGATTATGATACTATAAACACTGCCCCTCTTCTCAAGACCCCTTCACCGATGGAGAAACAGACTGGTGAGCTTTACACGAGGAAATTGTTTATGAAGTTCCAAGAGGAGCTGGTTGAGACATTAACTTTCTTGGCAACCAAAGTTGAGGATGAGGAGGCAGGATCCATATATCAAGTTGCTAAATTTGGAGAAAGTCACAGAGCTTATTTTGTCAGATACGATGTTCATGAGATGAAAGCATTTTGTAGTTGCCAGATGTTTGAGTTCTCTGGCCTTCTTTGTGGACACATCTTGACAGTTTTTCGGGTGACAAATGTTCTTACTCTGCCATCTCATTATATTTTGAAGCGGTGGACGAGGAATGCCAAGAGTGATGTCATATTGGAGGAACGTGCCAGCAATTTGTTGAATAGGTCGCAAGAATATCTCACGGCACGATACAATAATCTTCGTCATGAGGCACTCAAGTATGTTGATGAAGGTGTTGGAACTGTTGAAATTTATAATGTGGCTATTGCTGCCCTTCAAGAAGCTGCAAAAAAAGTTGCTCTTGAAAACAAGAGTGGCGGGAGGTTGGTTAGTGTTAACAAAACTGGCAGAGATGACGATTTGCACTGGGGATGTCAAGCAAATACATTTGGTGATCATAAATGGGGCTTGGAAACTCTGTCTCCGATGCCAGCAAATCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TB2_DP1_HVA22

Protein Analysis

749

Amino Acids

86.0

Weight (kDa)

6.32

Isoelectric Point (pI)

51.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 93 - 187 2.2e-31 FAR1 DNA-binding domain
MULE PF10551 308 - 400 1.5e-30 MULE transposase domain
SWIM PF04434 595 - 621 7.3e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2061
Acc65I GGTACC 1 cut(s) 1387
AccB1I GGYRCC 2 cut(s) 350, 1387
AccB7I CCANNNNNTGG 1 cut(s) 553
AccBSI CCGCTC 2 cut(s) 336, 585
AccI GTMKAC 2 cut(s) 5, 1272
AccII CGCG 1 cut(s) 451
AclWI GGATC 5 cut(s) 29, 875, 1126, 1713, 1726
AcoI YGGCCR 1 cut(s) 1090
AcsI RAATTY 3 cut(s) 98, 1739, 2055
AcuI CTGAAG 1 cut(s) 292
AfaI GTAC 2 cut(s) 1227, 1389
AfiI CCNNNNNNNGG 4 cut(s) 239, 553, 568, 980
AflIII ACRYGT 1 cut(s) 8
AgeI ACCGGT 1 cut(s) 951
AhdI GACNNNNNGTC 1 cut(s) 1100
AjiI CACGTC 1 cut(s) 598
AjnI CCWGG 2 cut(s) 338, 1149
AleI CACNNNNGTG 2 cut(s) 776, 1266
AluBI AGCT 9 cut(s) 78, 553, 1258, 1498, 1523, 1627, 1666, 1760, 2090
AluI AGCT 9 cut(s) 78, 553, 1258, 1498, 1523, 1627, 1666, 1760, 2090
Alw21I GWGCWC 1 cut(s) 783
Alw26I GTCTC 9 cut(s) 212, 333, 452, 604, 1108, 1157, 1320, 1667, 2232
AlwI GGATC 5 cut(s) 29, 875, 1126, 1713, 1726
Ama87I CYCGRG 3 cut(s) 227, 315, 774
AoxI GGCC 4 cut(s) 273, 650, 1090, 1828
ApeKI GCWGC 3 cut(s) 266, 2075, 2090
ApoI RAATTY 3 cut(s) 98, 1739, 2055
ArsI GACNNNNNNTTYG 2 cut(s) 1397, 1429
AsiGI ACCGGT 1 cut(s) 951
Asp700I GAANNNNTTC 1 cut(s) 1353
Asp718I GGTACC 1 cut(s) 1387
AspA2I CCTAGG 1 cut(s) 760
AspLEI GCGC 1 cut(s) 447
AspS9I GGNCC 3 cut(s) 419, 650, 756
AsuC2I CCSGG 2 cut(s) 563, 982
AvaI CYCGRG 3 cut(s) 227, 315, 774
AvaII GGWCC 2 cut(s) 419, 756
AvrII CCTAGG 1 cut(s) 760
AxyI CCTNAGG 1 cut(s) 885
BaeGI GKGCMC 1 cut(s) 1024
BamHI GGATCC 1 cut(s) 1718
BanI GGYRCC 2 cut(s) 350, 1387
BauI CACGAG 1 cut(s) 1633
Bbv12I GWGCWC 1 cut(s) 783
BbvI GCAGC 3 cut(s) 253, 2062, 2077
BceAI ACGGC 2 cut(s) 217, 2004
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 2 cut(s) 340, 1151
BclI TGATCA 3 cut(s) 844, 1117, 2200
BcnI CCSGG 2 cut(s) 563, 982
BcoDI GTCTC 9 cut(s) 212, 333, 452, 604, 1108, 1157, 1320, 1667, 2232
BfaI CTAG 4 cut(s) 462, 654, 761, 1305
BfmI CTRYAG 2 cut(s) 724, 1493
BfoI RGCGCY 1 cut(s) 448
BglI GCCNNNNNGGC 1 cut(s) 303
BisI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
BlnI CCTAGG 1 cut(s) 760
BlsI GCNGC 5 cut(s) 268, 299, 335, 2077, 2092
Bme1390I CCNGG 4 cut(s) 340, 563, 982, 1151
Bme18I GGWCC 2 cut(s) 419, 756
BmeRI GACNNNNNGTC 1 cut(s) 1100
BmeT110I CYCGRG 3 cut(s) 227, 315, 774
BmgBI CACGTC 1 cut(s) 598
BmgT120I GGNCC 3 cut(s) 419, 650, 756
BmiI GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
BmrFI CCNGG 4 cut(s) 340, 563, 982, 1151
BmrI ACTGGG 1 cut(s) 2182
BmsI GCATC 2 cut(s) 1055, 2223
BmuI ACTGGG 1 cut(s) 2182
BpmI CTGGAG 2 cut(s) 322, 1083
BpuEI CTTGAG 3 cut(s) 1420, 1574, 2006
BpuMI CCSGG 2 cut(s) 563, 982
BsaJI CCNNGG 6 cut(s) 270, 381, 561, 760, 981, 1149
BsaWI WCCGGW 1 cut(s) 951
BsaXI ACNNNNNCTCC 4 cut(s) 239, 269, 2212, 2242
Bsc4I CCNNNNNNNGG 4 cut(s) 239, 553, 568, 980
Bse118I RCCGGY 1 cut(s) 951
Bse1I ACTGG 6 cut(s) 307, 853, 1100, 1624, 2155, 2177
Bse21I CCTNAGG 1 cut(s) 885
Bse3DI GCAATG 4 cut(s) 189, 486, 574, 1089
BseBI CCWGG 2 cut(s) 340, 1151
BseDI CCNNGG 6 cut(s) 270, 381, 561, 760, 981, 1149
BseGI GGATG 7 cut(s) 36, 249, 352, 357, 518, 1711, 2183
BseLI CCNNNNNNNGG 4 cut(s) 239, 553, 568, 980
BseMI GCAATG 4 cut(s) 189, 486, 574, 1089
BseMII CTCAG 6 cut(s) 414, 447, 1032, 1152, 1224, 1351
BseNI ACTGG 6 cut(s) 307, 853, 1100, 1624, 2155, 2177
BseRI GAGGAG 3 cut(s) 754, 1676, 1724
BseSI GKGCMC 1 cut(s) 1024
BseXI GCAGC 3 cut(s) 253, 2062, 2077
BseYI CCCAGC 2 cut(s) 641, 817
BsgI GTGCAG 1 cut(s) 857
Bsh1236I CGCG 1 cut(s) 451
BshFI GGCC 4 cut(s) 275, 652, 1092, 1830
BshNI GGYRCC 2 cut(s) 350, 1387
BshTI ACCGGT 1 cut(s) 951
BsiHKAI GWGCWC 1 cut(s) 783
BsiHKCI CYCGRG 3 cut(s) 227, 315, 774
BsiSI CCGG 3 cut(s) 563, 952, 981
BslFI GGGAC 2 cut(s) 1204, 1418
BslI CCNNNNNNNGG 4 cut(s) 239, 553, 568, 980
BsmAI GTCTC 9 cut(s) 212, 333, 452, 604, 1108, 1157, 1320, 1667, 2232
BsmBI CGTCTC 1 cut(s) 604
BsmFI GGGAC 2 cut(s) 1204, 1418
BsmI GAATGC 2 cut(s) 1237, 1924
BsnI GGCC 4 cut(s) 275, 652, 1092, 1830
BsoBI CYCGRG 3 cut(s) 227, 315, 774
Bsp1286I GDGCHC 2 cut(s) 783, 1024
BspANI GGCC 4 cut(s) 275, 652, 1092, 1830
BspCNI CTCAG 6 cut(s) 415, 448, 1033, 1153, 1225, 1350
BspFNI CGCG 1 cut(s) 451
BspHI TCATGA 5 cut(s) 1120, 1345, 1449, 1783, 2011
BspLI GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
BspMAI CTGCAG 1 cut(s) 728
BspPI GGATC 5 cut(s) 29, 875, 1126, 1713, 1726
BspT107I GGYRCC 2 cut(s) 350, 1387
BsrBI CCGCTC 2 cut(s) 336, 585
BsrDI GCAATG 4 cut(s) 189, 486, 574, 1089
BsrFI RCCGGY 1 cut(s) 951
BsrI ACTGG 6 cut(s) 307, 853, 1100, 1624, 2155, 2177
BssAI RCCGGY 1 cut(s) 951
BssECI CCNNGG 6 cut(s) 270, 381, 561, 760, 981, 1149
BssNAI GTATAC 1 cut(s) 6
BssSI CACGAG 1 cut(s) 1633
BssT1I CCWWGG 3 cut(s) 270, 381, 760
Bst1107I GTATAC 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 1633
Bst2UI CCWGG 2 cut(s) 340, 1151
Bst4CI ACNGT 4 cut(s) 922, 1218, 1855, 2050
Bst6I CTCTTC 3 cut(s) 255, 1287, 1590
BstC8I GCNNGC 6 cut(s) 295, 449, 453, 807, 1954, 2238
BstDEI CTNAG 7 cut(s) 423, 456, 885, 1041, 1161, 1233, 1337
BstF5I GGATG 7 cut(s) 36, 249, 352, 357, 518, 1711, 2183
BstFNI CGCG 1 cut(s) 451
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 1 cut(s) 447
BstMAI GTCTC 9 cut(s) 212, 333, 452, 604, 1108, 1157, 1320, 1667, 2232
BstMWI GCNNNNNNNGC 6 cut(s) 272, 303, 330, 412, 705, 2075
BstNI CCWGG 2 cut(s) 340, 1151
BstNSI RCATGY 2 cut(s) 12, 328
BstSCI CCNGG 4 cut(s) 338, 561, 980, 1149
BstSFI CTRYAG 2 cut(s) 724, 1493
BstSLI GKGCMC 1 cut(s) 1024
BstUI CGCG 1 cut(s) 451
BstV1I GCAGC 3 cut(s) 253, 2062, 2077
BstX2I RGATCY 1 cut(s) 1718
BstYI RGATCY 1 cut(s) 1718
BstZ17I GTATAC 1 cut(s) 6
Bsu36I CCTNAGG 1 cut(s) 885
BsuRI GGCC 4 cut(s) 275, 652, 1092, 1830
BtrI CACGTC 1 cut(s) 598
BtsCI GGATG 7 cut(s) 36, 249, 352, 357, 518, 1711, 2183
BtsI GCAGTG 2 cut(s) 1388, 1575
BtsIMutI CAGTG 5 cut(s) 300, 860, 1388, 1575, 2170
Cac8I GCNNGC 6 cut(s) 295, 449, 453, 807, 1954, 2238
CciI TCATGA 5 cut(s) 1120, 1345, 1449, 1783, 2011
CfoI GCGC 1 cut(s) 447
Cfr10I RCCGGY 1 cut(s) 951
Cfr13I GGNCC 3 cut(s) 419, 650, 756
CseI GACGC 1 cut(s) 1470
Csp6I GTAC 2 cut(s) 1226, 1388
CspAI ACCGGT 1 cut(s) 951
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviQI GTAC 2 cut(s) 1226, 1388
DdeI CTNAG 7 cut(s) 423, 456, 885, 1041, 1161, 1233, 1337
DraI TTTAAA 2 cut(s) 1066, 1198
DriI GACNNNNNGTC 1 cut(s) 1100
EaeI YGGCCR 1 cut(s) 1090
Eam1104I CTCTTC 3 cut(s) 255, 1287, 1590
Eam1105I GACNNNNNGTC 1 cut(s) 1100
EarI CTCTTC 3 cut(s) 255, 1287, 1590
EciI GGCGGA 1 cut(s) 658
Eco130I CCWWGG 3 cut(s) 270, 381, 760
Eco147I AGGCCT 1 cut(s) 275
Eco32I GATATC 1 cut(s) 1447
Eco47I GGWCC 2 cut(s) 419, 756
Eco57I CTGAAG 1 cut(s) 292
Eco81I CCTNAGG 1 cut(s) 885
Eco88I CYCGRG 3 cut(s) 227, 315, 774
EcoO109I RGGNCCY 1 cut(s) 756
EcoRII CCWGG 2 cut(s) 338, 1149
EcoRV GATATC 1 cut(s) 1447
EcoT14I CCWWGG 3 cut(s) 270, 381, 760
ErhI CCWWGG 3 cut(s) 270, 381, 760
Esp3I CGTCTC 1 cut(s) 604
FalI AAGNNNNNCTT 4 cut(s) 1242, 1274, 2091, 2123
FaqI GGGAC 2 cut(s) 1204, 1418
FauI CCCGC 3 cut(s) 336, 456, 2117
FbaI TGATCA 3 cut(s) 844, 1117, 2200
FblI GTMKAC 2 cut(s) 5, 1272
Fnu4HI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
FokI GGATG 7 cut(s) 43, 256, 344, 359, 525, 1718, 2190
Fsp4HI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
FspBI CTAG 4 cut(s) 462, 654, 761, 1305
GlaI GCGC 1 cut(s) 446
GluI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
GsaI CCCAGC 2 cut(s) 645, 821
GsuI CTGGAG 2 cut(s) 322, 1083
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 4 cut(s) 275, 652, 1092, 1830
HapII CCGG 3 cut(s) 563, 952, 981
HgaI GACGC 1 cut(s) 1470
HhaI GCGC 1 cut(s) 447
Hin6I GCGC 1 cut(s) 445
HinP1I GCGC 1 cut(s) 445
HincII GTYRAC 5 cut(s) 142, 988, 1273, 1485, 2143
HindII GTYRAC 5 cut(s) 142, 988, 1273, 1485, 2143
HinfI GANTC 8 cut(s) 161, 254, 496, 503, 1037, 1165, 1283, 1301
HpaI GTTAAC 2 cut(s) 988, 2143
HpaII CCGG 3 cut(s) 563, 952, 981
Hpy166II GTNNAC 9 cut(s) 6, 38, 142, 988, 1273, 1485, 1841, 1911, 2143
Hpy188I TCNGA 6 cut(s) 259, 1042, 1234, 1340, 1772, 2232
Hpy8I GTNNAC 9 cut(s) 6, 38, 142, 988, 1273, 1485, 1841, 1911, 2143
HpyAV CCTTC 8 cut(s) 206, 1371, 1420, 1546, 1608, 1841, 2030, 2090
HpyCH4III ACNGT 4 cut(s) 922, 1218, 1855, 2050
HpyCH4IV ACGT 3 cut(s) 597, 1438, 1948
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 303, 330, 412, 705, 2075
HpyF3I CTNAG 7 cut(s) 423, 456, 885, 1041, 1161, 1233, 1337
HpySE526I ACGT 3 cut(s) 597, 1438, 1948
HspAI GCGC 1 cut(s) 445
KpnI GGTACC 1 cut(s) 1391
Ksp22I TGATCA 3 cut(s) 844, 1117, 2200
KspAI GTTAAC 2 cut(s) 988, 2143
LmnI GCTCC 3 cut(s) 341, 715, 1663
Lsp1109I GCAGC 3 cut(s) 253, 2062, 2077
LweI GCATC 2 cut(s) 1055, 2223
MaeI CTAG 4 cut(s) 462, 654, 761, 1305
MaeII ACGT 3 cut(s) 597, 1438, 1948
MaeIII GTNAC 7 cut(s) 119, 593, 719, 767, 922, 1751, 1864
MbiI CCGCTC 2 cut(s) 336, 585
MboII GAAGA 6 cut(s) 272, 808, 862, 1304, 1577, 1997
MflI RGATCY 1 cut(s) 1718
MhlI GDGCHC 2 cut(s) 783, 1024
MluCI AATT 9 cut(s) 13, 98, 660, 730, 1320, 1640, 1739, 1957, 2055
MlyI GAGTC 4 cut(s) 263, 497, 1159, 1310
MmeI TCCRAC 2 cut(s) 1266, 2023
MroXI GAANNNNTTC 1 cut(s) 1353
MseI TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
MslI CAYNNNNRTG 3 cut(s) 546, 776, 1266
MspA1I CMGCKG 1 cut(s) 1498
MspI CCGG 3 cut(s) 563, 952, 981
MspR9I CCNGG 4 cut(s) 340, 563, 982, 1151
Mva1269I GAATGC 2 cut(s) 1237, 1924
MvaI CCWGG 2 cut(s) 340, 1151
MvnI CGCG 1 cut(s) 451
MwoI GCNNNNNNNGC 6 cut(s) 272, 303, 330, 412, 705, 2075
NciI CCSGG 2 cut(s) 563, 982
NlaIV GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
NmuCI GTSAC 6 cut(s) 119, 593, 719, 767, 1751, 1864
NspI RCATGY 2 cut(s) 12, 328
OliI CACNNNNGTG 2 cut(s) 776, 1266
PaeR7I CTCGAG 1 cut(s) 227
PagI TCATGA 5 cut(s) 1120, 1345, 1449, 1783, 2011
PceI AGGCCT 1 cut(s) 275
PciI ACATGT 1 cut(s) 8
PctI GAATGC 2 cut(s) 1237, 1924
PdmI GAANNNNTTC 1 cut(s) 1353
PfeI GAWTC 4 cut(s) 161, 496, 1037, 1283
PflMI CCANNNNNTGG 1 cut(s) 553
PinAI ACCGGT 1 cut(s) 951
PkrI GCNGC 5 cut(s) 268, 299, 335, 2077, 2092
PleI GAGTC 4 cut(s) 262, 497, 1159, 1309
PpsI GAGTC 4 cut(s) 262, 497, 1159, 1309
PpuMI RGGWCCY 1 cut(s) 756
PscI ACATGT 1 cut(s) 8
PsiI TTATAA 1 cut(s) 2061
Psp5II RGGWCCY 1 cut(s) 756
Psp6I CCWGG 2 cut(s) 338, 1149
PspFI CCCAGC 2 cut(s) 641, 817
PspGI CCWGG 2 cut(s) 338, 1149
PspN4I GGNNCC 6 cut(s) 181, 352, 558, 758, 1389, 1720
PspPI GGNCC 3 cut(s) 419, 650, 756
PspPPI RGGWCCY 1 cut(s) 756
PstI CTGCAG 1 cut(s) 728
PsuI RGATCY 1 cut(s) 1718
PvuII CAGCTG 1 cut(s) 1498
RsaI GTAC 2 cut(s) 1227, 1389
RsaNI GTAC 2 cut(s) 1226, 1388
RseI CAYNNNNRTG 3 cut(s) 546, 776, 1266
SalI GTCGAC 1 cut(s) 1271
SaqAI TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
SatI GCNGC 5 cut(s) 267, 298, 334, 2076, 2091
Sau96I GGNCC 3 cut(s) 419, 650, 756
SchI GAGTC 4 cut(s) 263, 497, 1159, 1310
ScrFI CCNGG 4 cut(s) 340, 563, 982, 1151
SduI GDGCHC 2 cut(s) 783, 1024
SfaNI GCATC 2 cut(s) 1055, 2223
SfcI CTRYAG 2 cut(s) 724, 1493
Sfr274I CTCGAG 1 cut(s) 227
SinI GGWCC 2 cut(s) 419, 756
SlaI CTCGAG 1 cut(s) 227
SmiMI CAYNNNNRTG 3 cut(s) 546, 776, 1266
SmlI CTYRAG 4 cut(s) 227, 1399, 1589, 2021
SmoI CTYRAG 4 cut(s) 227, 1399, 1589, 2021
Sse9I AATT 9 cut(s) 13, 98, 660, 730, 1320, 1640, 1739, 1957, 2055
SseBI AGGCCT 1 cut(s) 275
SspMI CTAG 4 cut(s) 462, 654, 761, 1305
StuI AGGCCT 1 cut(s) 275
StyD4I CCNGG 4 cut(s) 338, 561, 980, 1149
StyI CCWWGG 3 cut(s) 270, 381, 760
TaaI ACNGT 4 cut(s) 922, 1218, 1855, 2050
TaiI ACGT 3 cut(s) 600, 1441, 1951
TaqI TCGA 5 cut(s) 210, 228, 1168, 1272, 1375
TasI AATT 9 cut(s) 13, 98, 660, 730, 1320, 1640, 1739, 1957, 2055
TatI WGTACW 1 cut(s) 1225
TauI GCSGC 2 cut(s) 300, 336
TfiI GAWTC 4 cut(s) 161, 496, 1037, 1283
Tru1I TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
Tru9I TTAA 7 cut(s) 534, 987, 1065, 1197, 1506, 1679, 2142
TscAI CASTG 5 cut(s) 307, 860, 1388, 1582, 2177
TseFI GTSAC 6 cut(s) 119, 593, 719, 767, 1751, 1864
TseI GCWGC 3 cut(s) 266, 2075, 2090
Tsp45I GTSAC 6 cut(s) 119, 593, 719, 767, 1751, 1864
TspDTI ATGAA 8 cut(s) 423, 1050, 1362, 1466, 1664, 1772, 1805, 2049
TspGWI ACGGA 1 cut(s) 728
TspRI CASTG 5 cut(s) 307, 860, 1388, 1582, 2177
Van91I CCANNNNNTGG 1 cut(s) 553
VpaK11BI GGWCC 2 cut(s) 419, 756
XapI RAATTY 3 cut(s) 98, 1739, 2055
XceI RCATGY 2 cut(s) 12, 328
XhoI CTCGAG 1 cut(s) 227
XmaJI CCTAGG 1 cut(s) 760
XmiI GTMKAC 2 cut(s) 5, 1272
XmnI GAANNNNTTC 1 cut(s) 1353
XspI CTAG 4 cut(s) 462, 654, 761, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.