Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002143

Physical Location & Seq

Genomic Coordinates Forward (+)

61013694 .. 61042919

Gene Structure 29226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0479200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2874 bp

ATGGCAGCGGATGTTGTTGAGTTTCTCCGGAACAGGTTCTCGAGGTCTCTTGTAGAGGCAAAGTCTGAATTATCAGGCTCTGGTCCTGCAAATCTCTTGTCTTTCTTGGGAGAAATCGAACATACCGTCACGCAGAAACAAATAAATCCGAGAGCTGATTTCACTGCCCTCATCCGTACACTCACCAAGCTCAACGACGCATTGTCCGAGTGCCGAACTTTCCTGGCAAATCATGTGGGTAAAGAGCTAAACTGGGCAGTAATGACGAATTGTTACTTCATCCAAAAGATAAAGAAGCGGCTGTCGGCACTGGAAAGGGAGTTTGCCACTTTGGTTGAAAACCCTTACACCCCGGAGGCGGCGGCGGGGGAGAGGAAAGAGGAGGCGGCGGCGTCGGGGAGGAAATTGGAGGAGGAGGAGGAGCGGTGCACAAGCGAATTAGATGATGATGATGAGTTAGTAGAACCCATTTTGGATGCGTTATTCACTAAATTTTTAGCTGAAGATATTGGTGTGACGGTAATTGGGATAGTGGGCATGGCTGGTACGGGTAAGACCACCCTGGTGCAGAAGCTTTTGAAAAAATATAGAGTGAAGCACCCTTTTTCTCCTATCATACAGGTTTGCATGTCCGATGTGATAAAAGATAAACAAGCTGGGGTTGGAAATGGCATGGAGGAGGAGACTCGAATTGTGAAACATATTCTTGAAAAGCTGGATCTTATGATCAGCAAGGTCGACCAAGAAGAGAAGTCTGGTATTTCTGGTGCCGGACTTGAATCCCTCTTGCAAAGGCTCCACAAACATTTATTGGGCAAAAGGTATGTAATCGTATTGGATGATGTGTGGGACATTAAGCCTTTCTATTCGGATTTAGCAGGAACTAGGAGAAGAGGTATTGAGCAAACAGAAGAACATGATGATCAATGTCCTCGCTTAACGCAGGGATTGCCCAAGGATAAGGGTAGTAGTAGAGGTGCGGTCATTTTCACCACCAGAATACCCGAAGTCGTTCATCATATGGCTAGCAAAGATGACACGATTATTGATTTAAGATCTATGGATGAAGACTCTTTGATGGAAATAGCAAGTGCCGGACTCGACCGTTGGGCAAGAGAATCATCTGTTGTACGAGCCTGGGTAGATATGATACGTGAGATTATTCATCGATGTCAAGGTCTACCTTTGGCTGCTAAGATATTCGGCGACACCATTCCCTACAAGATATTCGAGTATATTCTTCTCACTATTCTTTTTATTTTTTATTTTATTTTATTTTTTATTTCTTGGGGTTTTTTTTTATTTATTGGGTTCATAATCAACAGGTCCATGCGCTTTTTCAATATGTGGTCCCTTGATGACTCTCGGTTTAGCTACAAGGAACCACCAGAATATCCGGTGGTAGTGTTTATTGATGTGCAAAATGAAAAGCTAGGAGTAAGACTCTTTGACGAATTTAGCTACCGTTTGGGAGGGTACCAGGTCTGTGCTGTGCTGGAAGACAACTCTGTTTTTGTGCCAAAACGAATCAAGGCTAGGAATCTCTCAGGAGTGTTGGTTCAATATTATACTGCACTTGCATATTTTAATAGGGAAATTACCAATGAGATTCGACAGAGGATGAGGATTATAATTGTTGGTGGGGATGCTGTGGCCAACAAGATCTTCCGAACTCTATCTGATCTAGAACTGTCAGAGTCGCCTGACATTGTTGTGATAGCAACACCTGGAACAGGAAATAACATCGCATTTTCGTTTGGATGGGAGCTAAAGCAGGTTGATCGTCAATCAATGAGATCATTCCTTGAACAAGTATTAAGGGCAAAGCCAATGACAATAGACAGCTGGCATATTCTCATTGAGATGAGAGACGCTCAAAGTTTAACTGCTCATCAACAAAGACAAACTTCTCTGCTTCCATTTCCTCATGTTGACGAAAGAAAGAAGCCAAAAGTGGATAATTCAACACTCTGCGGAGGATTTTGGAACTACTTCAGCTTAGAGATGATCTTTAAAGAATCATATGACACAGCTTTTAATGCTCCGAGTTGTAGGGGAGCTTCATGCTTTCACCCGACTCCAAGAAACAGGACCTCATCTTCATTTGCAAAAGTCCGAGTTTTGAAACATCCGGGAGGTCAATGGGAGACTTTTAACATTCCTTCAAGTATCAGGTCAATTCTTTGTCTCAACTTGCCTTGCTTTCATGGTGGACTAAATCCCTGGCAAATAGGACGTTCAAAGAAAGATCAAAAGACGGGCCTAACCCCATCTTTCATAGATGATGCACGCTTTGAAATTATTGGTTCCAAAGATAACTTCCTTTCTCAGACGAAAAGGAAAGAGTGGATTCACCTTGATCAGGTACGGGGAATTCGATTTGAGTTTACTGAGGGCGCAGCAGAGGCTATGAGCATGAGGATAGACGGAGCACCATGGGGAAACATCCCACTTGATGTCATCACATCGATTGAAATCTCTTATCACGGTAAACTCAACATCCTTGCCCATCCAAATCGTGATTGCCCAGCAAAGAGTATCCACGAGTCGTCACAACCCCGCGTTTCTGAAACCGATGTTAACAACAATATTGCTAAAGATGGCTCCTCTGGAGGACATAAGGAGCTGCTGGGTGTAGCAAGCACTGATTCCAAACTTCCCATTGATGATAACAAGGCTAAAGACCACTCTGAAAGCCATAAGACGTTGGGTAATGTAGCAAGCAGTTCCAAAATCCCCAGTCATGATGGCAATGCTGAAGATTATTGCCATGAATGGCGTCATAAGAAGTTTGGTGCAGCAAGTACCTTCAAATTCGATCCTGATTATAATCCTTATTCTGATTCTGATTCGGATTCTGATTGTCCGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

SUI1

Protein Analysis

957

Amino Acids

108.2

Weight (kDa)

6.16

Isoelectric Point (pI)

41.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	164 - 286	7.2e-18	NB-ARC domain
DAGK_acc	PF00609	713 - 812	2.1e-09	Diacylglycerol kinase accessory domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002143)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21740
fragaria_vesca	FvH4_6g43470 FvH4_6g43470
malus_domestica	MD01G1026000.v1.1 MD09G1106100.v1.1 MD09G1106200.v1.1 MD12G1177800.v1.1 MD12G1178000.v1.1 MD17G1094000.v1.1
prunus_persica	Prupe.3G219400_v2.0.a1 Prupe.3G219400_v2.0.a1 Prupe.8G006000_v2.0.a1
pyrus_communis	pycom01g05430 pycom09g02880 pycom09g04290 pycom12g16820 pycom17g09080
rosa_chinensis	RchiOBHm_Chr2g0159941 RchiOBHm_Chr5g0074711
rosa_laevigata	RLG00000021186 RLG00000022621 RLG00000036499
rosa_multiflora	Rmu_sc0000909.1_g000025 Rmu_sc0002508.1_g000037 Rmu_sc0012797.1_g000002 Rmu_sc0019386.1_g000001 Rmu_sc0029076.1_g000003
rosa_roxburghii	Rroxscaffold_1G00006850 Rroxscaffold_2G00090140
rosa_rugosa	Rorug02G0479200 Rorug02G0479200 Rorug02G0479300
rosa_samantha	Rh2AG545900 Rh2BG559200 Rh2CG529300 Rh2DG567900 Rh3BG356500 Rh5AG490900 Rh5BG512200 Rh5CG535900 Rh5DG524600
rosa_wichuraiana	Rw2G045150 Rw3G028060 Rw5G045480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1631, 2829
Acc36I	ACCTGC	1 cut(s)	1765
Acc65I	GGTACC	1 cut(s)	1476
AccB1I	GGYRCC	2 cut(s)	767, 1476
AccBSI	CCGCTC	1 cut(s)	424
AccI	GTMKAC	2 cut(s)	738, 1180
AccII	CGCG	1 cut(s)	2562
AccIII	TCCGGA	1 cut(s)	27
AclWI	GGATC	2 cut(s)	726, 2813
AcoI	YGGCCR	1 cut(s)	1653
AcsI	RAATTY	4 cut(s)	491, 1454, 2373, 2813
AcuI	CTGAAG	3 cut(s)	522, 1978, 2778
AcyI	GRCGYC	2 cut(s)	392, 2779
AfaI	GTAC	6 cut(s)	178, 547, 1131, 1478, 2367, 2806
AfiI	CCNNNNNNNGG	3 cut(s)	358, 1733, 2362
AhdI	GACNNNNNGTC	1 cut(s)	202
AjnI	CCWGG	6 cut(s)	222, 561, 1136, 1479, 1726, 2222
AjuI	GAANNNNNNNTTGG	4 cut(s)	1649, 1681, 2303, 2335
AleI	CACNNNNGTG	1 cut(s)	563
AloI	GAACNNNNNNTCC	2 cut(s)	1542, 1574
Alw21I	GWGCWC	2 cut(s)	431, 2434
Alw26I	GTCTC	5 cut(s)	51, 677, 1863, 2141, 2192
Alw44I	GTGCAC	1 cut(s)	427
AlwI	GGATC	2 cut(s)	726, 2813
AlwNI	CAGNNNCTG	1 cut(s)	80
Ama87I	CYCGRG	1 cut(s)	40
Aor13HI	TCCGGA	1 cut(s)	27
AoxI	GGCC	2 cut(s)	1653, 2260
ApaLI	GTGCAC	1 cut(s)	427
ApeKI	GCWGC	5 cut(s)	5, 1190, 2399, 2626, 2798
ApoI	RAATTY	4 cut(s)	491, 1454, 2373, 2813
ArsI	GACNNNNNNTTYG	4 cut(s)	83, 111, 115, 143
Asp700I	GAANNNNTTC	3 cut(s)	35, 1011, 1991
Asp718I	GGTACC	1 cut(s)	1476
AspLEI	GCGC	2 cut(s)	1335, 2399
AspS9I	GGNCC	5 cut(s)	83, 1326, 1350, 2091, 2260
AsuC2I	CCSGG	2 cut(s)	353, 2133
AsuHPI	GGTGA	4 cut(s)	175, 982, 2063, 2345
AsuNHI	GCTAGC	1 cut(s)	1025
AvaI	CYCGRG	1 cut(s)	40
AvaII	GGWCC	4 cut(s)	83, 1326, 1350, 2091
BaeGI	GKGCMC	1 cut(s)	431
BalI	TGGCCA	1 cut(s)	1655
BanI	GGYRCC	2 cut(s)	767, 1476
BarI	GAAGNNNNNNTAC	2 cut(s)	2044, 2076
BauI	CACGAG	1 cut(s)	2543
BbsI	GAAGAC	2 cut(s)	1074, 1506
Bbv12I	GWGCWC	2 cut(s)	431, 2434
BbvI	GCAGC	5 cut(s)	17, 1177, 2411, 2613, 2810
BccI	CCATC	6 cut(s)	1072, 1755, 2278, 2517, 2594, 2741
BcgI	CGANNNNNNTGC	2 cut(s)	1763, 1797
BciT130I	CCWGG	6 cut(s)	224, 563, 1138, 1481, 1728, 2224
BciVI	GTATCC	1 cut(s)	2549
BclI	TGATCA	3 cut(s)	726, 922, 2359
BcnI	CCSGG	2 cut(s)	353, 2133
BcoDI	GTCTC	5 cut(s)	51, 677, 1863, 2141, 2192
BfaI	CTAG	5 cut(s)	885, 1026, 1433, 1536, 1685
BfuAI	ACCTGC	1 cut(s)	1765
BfuI	GTATCC	1 cut(s)	2549
BglII	AGATCT	2 cut(s)	1055, 1662
Bme1390I	CCNGG	8 cut(s)	224, 353, 563, 1138, 1481, 1728, 2133, 2224
Bme18I	GGWCC	4 cut(s)	83, 1326, 1350, 2091
BmeRI	GACNNNNNGTC	1 cut(s)	202
BmeT110I	CYCGRG	1 cut(s)	40
BmgT120I	GGNCC	5 cut(s)	83, 1326, 1350, 2091, 2260
BmiI	GGNNCC	7 cut(s)	769, 797, 1352, 1383, 1478, 2308, 2605
BmrFI	CCNGG	8 cut(s)	224, 353, 563, 1138, 1481, 1728, 2133, 2224
BmrI	ACTGGG	2 cut(s)	262, 2733
BmsI	GCATC	3 cut(s)	466, 1636, 2275
BmtI	GCTAGC	1 cut(s)	1029
BmuI	ACTGGG	2 cut(s)	262, 2733
BpiI	GAAGAC	2 cut(s)	1074, 1506
BplI	GAGNNNNNCTC	4 cut(s)	1428, 1460, 1858, 1890
BpmI	CTGGAG	1 cut(s)	2631
BpuMI	CCSGG	2 cut(s)	353, 2133
Bsa29I	ATCGAT	2 cut(s)	1168, 2468
BsaAI	YACGTR	1 cut(s)	1154
BsaBI	GATNNNNATC	2 cut(s)	2474, 2829
BsaHI	GRCGYC	2 cut(s)	392, 2779
BsaI	GGTCTC	1 cut(s)	51
BsaJI	CCNNGG	6 cut(s)	351, 561, 954, 1137, 2222, 2435
BsaWI	WCCGGW	2 cut(s)	27, 1396
BsaXI	ACNNNNNCTCC	6 cut(s)	410, 440, 880, 910, 1542, 1572
Bsc4I	CCNNNNNNNGG	3 cut(s)	358, 1733, 2362
Bse1I	ACTGG	3 cut(s)	257, 315, 2739
Bse3DI	GCAATG	1 cut(s)	2758
Bse8I	GATNNNNATC	2 cut(s)	2474, 2829
BseAI	TCCGGA	1 cut(s)	27
BseBI	CCWGG	6 cut(s)	224, 563, 1138, 1481, 1728, 2224
BseCI	ATCGAT	2 cut(s)	1168, 2468
BseDI	CCNNGG	6 cut(s)	351, 561, 954, 1137, 2222, 2435
BseJI	GATNNNNATC	2 cut(s)	2474, 2829
BseLI	CCNNNNNNNGG	3 cut(s)	358, 1733, 2362
BseMI	GCAATG	1 cut(s)	2758
BseMII	CTCAG	3 cut(s)	1560, 2342, 2382
BseNI	ACTGG	3 cut(s)	257, 315, 2739
BseRI	GAGGAG	8 cut(s)	395, 425, 428, 431, 434, 692, 695, 2596
BseSI	GKGCMC	1 cut(s)	431
BseXI	GCAGC	5 cut(s)	17, 1177, 2411, 2613, 2810
BseYI	CCCAGC	3 cut(s)	656, 2527, 2629
BsgI	GTGCAG	3 cut(s)	587, 1557, 2817
Bsh1236I	CGCG	1 cut(s)	2562
Bsh1285I	CGRYCG	1 cut(s)	1105
BshFI	GGCC	2 cut(s)	1655, 2262
BshNI	GGYRCC	2 cut(s)	767, 1476
BshVI	ATCGAT	2 cut(s)	1168, 2468
BsiEI	CGRYCG	1 cut(s)	1105
BsiHKAI	GWGCWC	2 cut(s)	431, 2434
BsiHKCI	CYCGRG	1 cut(s)	40
BsiSI	CCGG	6 cut(s)	28, 353, 771, 1095, 1397, 2132
BslFI	GGGAC	2 cut(s)	863, 1336
BslI	CCNNNNNNNGG	3 cut(s)	358, 1733, 2362
BsmAI	GTCTC	5 cut(s)	51, 677, 1863, 2141, 2192
BsmBI	CGTCTC	1 cut(s)	1863
BsmFI	GGGAC	2 cut(s)	863, 1336
BsnI	GGCC	2 cut(s)	1655, 2262
Bso31I	GGTCTC	1 cut(s)	51
BsoBI	CYCGRG	1 cut(s)	40
Bsp1286I	GDGCHC	2 cut(s)	431, 2434
Bsp13I	TCCGGA	1 cut(s)	27
Bsp19I	CCATGG	1 cut(s)	2435
BspANI	GGCC	2 cut(s)	1655, 2262
BspCNI	CTCAG	3 cut(s)	1559, 2341, 2383
BspDI	ATCGAT	2 cut(s)	1168, 2468
BspEI	TCCGGA	1 cut(s)	27
BspFNI	CGCG	1 cut(s)	2562
BspHI	TCATGA	1 cut(s)	2743
BspLI	GGNNCC	7 cut(s)	769, 797, 1352, 1383, 1478, 2308, 2605
BspMI	ACCTGC	1 cut(s)	1765
BspOI	GCTAGC	1 cut(s)	1029
BspPI	GGATC	2 cut(s)	726, 2813
BspT107I	GGYRCC	2 cut(s)	767, 1476
BspTNI	GGTCTC	1 cut(s)	51
BsrBI	CCGCTC	1 cut(s)	424
BsrDI	GCAATG	1 cut(s)	2758
BsrI	ACTGG	3 cut(s)	257, 315, 2739
BssECI	CCNNGG	6 cut(s)	351, 561, 954, 1137, 2222, 2435
BssNI	GRCGYC	2 cut(s)	392, 2779
BssSI	CACGAG	1 cut(s)	2543
BssT1I	CCWWGG	2 cut(s)	954, 2435
Bst2BI	CACGAG	1 cut(s)	2543
Bst2UI	CCWGG	6 cut(s)	224, 563, 1138, 1481, 1728, 2224
Bst4CI	ACNGT	6 cut(s)	127, 520, 1106, 1466, 1692, 2489
Bst6I	CTCTTC	2 cut(s)	741, 886
BstACI	GRCGYC	2 cut(s)	392, 2779
BstAPI	GCANNNNNTGC	1 cut(s)	949
BstBAI	YACGTR	1 cut(s)	1154
BstC8I	GCNNGC	5 cut(s)	1027, 1847, 2290, 2641, 2722
BstDEI	CTNAG	5 cut(s)	1194, 1546, 1999, 2328, 2391
BstDSI	CCRYGG	1 cut(s)	2435
BstENI	CCTNNNNNAGG	2 cut(s)	1731, 2360
BstFNI	CGCG	1 cut(s)	2562
BstHHI	GCGC	2 cut(s)	1335, 2399
BstMAI	GTCTC	5 cut(s)	51, 677, 1863, 2141, 2192
BstMCI	CGRYCG	1 cut(s)	1105
BstMWI	GCNNNNNNNGC	3 cut(s)	949, 2039, 2405
BstNI	CCWGG	6 cut(s)	224, 563, 1138, 1481, 1728, 2224
BstNSI	RCATGY	1 cut(s)	631
BstSCI	CCNGG	8 cut(s)	222, 351, 561, 1136, 1479, 1726, 2131, 2222
BstSLI	GKGCMC	1 cut(s)	431
BstUI	CGCG	1 cut(s)	2562
BstV1I	GCAGC	5 cut(s)	17, 1177, 2411, 2613, 2810
BstV2I	GAAGAC	2 cut(s)	1074, 1506
BstX2I	RGATCY	3 cut(s)	718, 1055, 1662
BstYI	RGATCY	3 cut(s)	718, 1055, 1662
Bsu15I	ATCGAT	2 cut(s)	1168, 2468
BsuI	GTATCC	1 cut(s)	2549
BsuRI	GGCC	2 cut(s)	1655, 2262
BsuTUI	ATCGAT	2 cut(s)	1168, 2468
BtgI	CCRYGG	1 cut(s)	2435
BtgZI	GCGATG	1 cut(s)	1729
BtsI	GCAGTG	1 cut(s)	162
BtsIMutI	CAGTG	3 cut(s)	162, 308, 2643
BveI	ACCTGC	1 cut(s)	1765
Cac8I	GCNNGC	5 cut(s)	1027, 1847, 2290, 2641, 2722
CaiI	CAGNNNCTG	1 cut(s)	80
CciI	TCATGA	1 cut(s)	2743
CfoI	GCGC	2 cut(s)	1335, 2399
Cfr13I	GGNCC	5 cut(s)	83, 1326, 1350, 2091, 2260
ClaI	ATCGAT	2 cut(s)	1168, 2468
CseI	GACGC	4 cut(s)	206, 381, 1880, 2768
CsiI	ACCWGGT	1 cut(s)	1479
Csp6I	GTAC	6 cut(s)	177, 546, 1130, 1477, 2366, 2805
CspCI	CAANNNNNGTGG	4 cut(s)	216, 251, 316, 351
CviQI	GTAC	6 cut(s)	177, 546, 1130, 1477, 2366, 2805
DdeI	CTNAG	5 cut(s)	1194, 1546, 1999, 2328, 2391
DraI	TTTAAA	1 cut(s)	2014
DriI	GACNNNNNGTC	1 cut(s)	202
EaeI	YGGCCR	1 cut(s)	1653
Eam1104I	CTCTTC	2 cut(s)	741, 886
Eam1105I	GACNNNNNGTC	1 cut(s)	202
EarI	CTCTTC	2 cut(s)	741, 886
Eco130I	CCWWGG	2 cut(s)	954, 2435
Eco31I	GGTCTC	1 cut(s)	51
Eco47I	GGWCC	4 cut(s)	83, 1326, 1350, 2091
Eco57I	CTGAAG	3 cut(s)	522, 1978, 2778
Eco88I	CYCGRG	1 cut(s)	40
EcoNI	CCTNNNNNAGG	2 cut(s)	1731, 2360
EcoO109I	RGGNCCY	1 cut(s)	2091
EcoRI	GAATTC	1 cut(s)	2373
EcoRII	CCWGG	6 cut(s)	222, 561, 1136, 1479, 1726, 2222
EcoT14I	CCWWGG	2 cut(s)	954, 2435
ErhI	CCWWGG	2 cut(s)	954, 2435
Esp3I	CGTCTC	1 cut(s)	1863
FalI	AAGNNNNNCTT	2 cut(s)	1891, 1923
FaqI	GGGAC	2 cut(s)	863, 1336
FauI	CCCGC	2 cut(s)	358, 2567
FauNDI	CATATG	2 cut(s)	1020, 2023
FbaI	TGATCA	3 cut(s)	726, 922, 2359
FblI	GTMKAC	2 cut(s)	738, 1180
FspBI	CTAG	5 cut(s)	885, 1026, 1433, 1536, 1685
GlaI	GCGC	2 cut(s)	1334, 2398
GsaI	CCCAGC	3 cut(s)	660, 2531, 2633
GsuI	CTGGAG	1 cut(s)	2631
HaeIII	GGCC	2 cut(s)	1655, 2262
HapII	CCGG	6 cut(s)	28, 353, 771, 1095, 1397, 2132
HgaI	GACGC	4 cut(s)	206, 381, 1880, 2768
HhaI	GCGC	2 cut(s)	1335, 2399
Hin1I	GRCGYC	2 cut(s)	392, 2779
Hin6I	GCGC	2 cut(s)	1333, 2397
HinP1I	GCGC	2 cut(s)	1333, 2397
HincII	GTYRAC	3 cut(s)	739, 1933, 2581
HindII	GTYRAC	3 cut(s)	739, 1933, 2581
HindIII	AAGCTT	1 cut(s)	572
HpaI	GTTAAC	1 cut(s)	2581
HpaII	CCGG	6 cut(s)	28, 353, 771, 1095, 1397, 2132
HphI	GGTGA	4 cut(s)	175, 982, 2063, 2345
Hpy166II	GTNNAC	9 cut(s)	179, 429, 739, 1181, 1933, 2213, 2388, 2492, 2581
Hpy188III	TCNNGA	9 cut(s)	28, 40, 707, 1548, 1685, 2519, 2610, 2744, 2822
Hpy8I	GTNNAC	9 cut(s)	179, 429, 739, 1181, 1933, 2213, 2388, 2492, 2581
Hpy99I	CGWCG	2 cut(s)	200, 397
HpyAV	CCTTC	2 cut(s)	2172, 2818
HpyCH4III	ACNGT	6 cut(s)	127, 520, 1106, 1466, 1692, 2489
HpyCH4IV	ACGT	3 cut(s)	1153, 2236, 2705
HpyF10VI	GCNNNNNNNGC	3 cut(s)	949, 2039, 2405
HpyF3I	CTNAG	5 cut(s)	1194, 1546, 1999, 2328, 2391
HpySE526I	ACGT	3 cut(s)	1153, 2236, 2705
Hsp92I	GRCGYC	2 cut(s)	392, 2779
HspAI	GCGC	2 cut(s)	1333, 2397
Kpn2I	TCCGGA	1 cut(s)	27
KpnI	GGTACC	1 cut(s)	1480
Ksp22I	TGATCA	3 cut(s)	726, 922, 2359
KspAI	GTTAAC	1 cut(s)	2581
LmnI	GCTCC	8 cut(s)	421, 801, 1765, 2047, 2057, 2429, 2609, 2623
Lsp1109I	GCAGC	5 cut(s)	17, 1177, 2411, 2613, 2810
LweI	GCATC	3 cut(s)	466, 1636, 2275
MabI	ACCWGGT	1 cut(s)	1479
MaeI	CTAG	5 cut(s)	885, 1026, 1433, 1536, 1685
MaeII	ACGT	3 cut(s)	1153, 2236, 2705
MaeIII	GTNAC	4 cut(s)	127, 272, 514, 2550
MbiI	CCGCTC	1 cut(s)	424
MflI	RGATCY	3 cut(s)	718, 1055, 1662
MhlI	GDGCHC	2 cut(s)	431, 2434
MlsI	TGGCCA	1 cut(s)	1655
MluNI	TGGCCA	1 cut(s)	1655
MlyI	GAGTC	8 cut(s)	679, 1064, 1092, 1355, 1437, 1706, 2071, 2555
MmeI	TCCRAC	1 cut(s)	643
Mox20I	TGGCCA	1 cut(s)	1655
MroI	TCCGGA	1 cut(s)	27
MroXI	GAANNNNTTC	3 cut(s)	35, 1011, 1991
MscI	TGGCCA	1 cut(s)	1655
MslI	CAYNNNNRTG	3 cut(s)	563, 1712, 1862
Msp20I	TGGCCA	1 cut(s)	1655
MspA1I	CMGCKG	2 cut(s)	8, 1845
MspI	CCGG	6 cut(s)	28, 353, 771, 1095, 1397, 2132
MspR9I	CCNGG	8 cut(s)	224, 353, 563, 1138, 1481, 1728, 2133, 2224
MvaI	CCWGG	6 cut(s)	224, 563, 1138, 1481, 1728, 2224
MvnI	CGCG	1 cut(s)	2562
MwoI	GCNNNNNNNGC	3 cut(s)	949, 2039, 2405
NciI	CCSGG	2 cut(s)	353, 2133
NcoI	CCATGG	1 cut(s)	2435
NdeI	CATATG	2 cut(s)	1020, 2023
NheI	GCTAGC	1 cut(s)	1025
NlaIV	GGNNCC	7 cut(s)	769, 797, 1352, 1383, 1478, 2308, 2605
NmuCI	GTSAC	3 cut(s)	127, 514, 2550
NspI	RCATGY	1 cut(s)	631
OliI	CACNNNNGTG	1 cut(s)	563
PaeR7I	CTCGAG	1 cut(s)	40
PagI	TCATGA	1 cut(s)	2743
PcsI	WCGNNNNNNNCGW	3 cut(s)	123, 204, 2374
PdmI	GAANNNNTTC	3 cut(s)	35, 1011, 1991
PfoI	TCCNGGA	1 cut(s)	2131
PleI	GAGTC	8 cut(s)	679, 1064, 1092, 1355, 1437, 1705, 2071, 2554
PpsI	GAGTC	8 cut(s)	679, 1064, 1092, 1355, 1437, 1705, 2071, 2554
Ppu21I	YACGTR	1 cut(s)	1154
PpuMI	RGGWCCY	1 cut(s)	2091
PsiI	TTATAA	2 cut(s)	1631, 2829
Psp5II	RGGWCCY	1 cut(s)	2091
Psp6I	CCWGG	6 cut(s)	222, 561, 1136, 1479, 1726, 2222
PspFI	CCCAGC	3 cut(s)	656, 2527, 2629
PspGI	CCWGG	6 cut(s)	222, 561, 1136, 1479, 1726, 2222
PspN4I	GGNNCC	7 cut(s)	769, 797, 1352, 1383, 1478, 2308, 2605
PspPI	GGNCC	5 cut(s)	83, 1326, 1350, 2091, 2260
PspPPI	RGGWCCY	1 cut(s)	2091
PstNI	CAGNNNCTG	1 cut(s)	80
PsuI	RGATCY	3 cut(s)	718, 1055, 1662
PvuII	CAGCTG	1 cut(s)	1845
RsaI	GTAC	6 cut(s)	178, 547, 1131, 1478, 2367, 2806
RsaNI	GTAC	6 cut(s)	177, 546, 1130, 1477, 2366, 2805
RseI	CAYNNNNRTG	3 cut(s)	563, 1712, 1862
SalI	GTCGAC	1 cut(s)	737
Sau96I	GGNCC	5 cut(s)	83, 1326, 1350, 2091, 2260
SchI	GAGTC	8 cut(s)	679, 1064, 1092, 1355, 1437, 1706, 2071, 2555
ScrFI	CCNGG	8 cut(s)	224, 353, 563, 1138, 1481, 1728, 2133, 2224
SduI	GDGCHC	2 cut(s)	431, 2434
SexAI	ACCWGGT	1 cut(s)	1479
SfaNI	GCATC	3 cut(s)	466, 1636, 2275
Sfr274I	CTCGAG	1 cut(s)	40
SinI	GGWCC	4 cut(s)	83, 1326, 1350, 2091
SlaI	CTCGAG	1 cut(s)	40
SmiMI	CAYNNNNRTG	3 cut(s)	563, 1712, 1862
SmlI	CTYRAG	1 cut(s)	40
SmoI	CTYRAG	1 cut(s)	40
SspI	AATATT	2 cut(s)	1565, 2590
SspMI	CTAG	5 cut(s)	885, 1026, 1433, 1536, 1685
StyD4I	CCNGG	8 cut(s)	222, 351, 561, 1136, 1479, 1726, 2131, 2222
StyI	CCWWGG	2 cut(s)	954, 2435
TaaI	ACNGT	6 cut(s)	127, 520, 1106, 1466, 1692, 2489
TaiI	ACGT	3 cut(s)	1156, 2239, 2708
TauI	GCSGC	5 cut(s)	301, 362, 365, 389, 392
TscAI	CASTG	3 cut(s)	169, 315, 2650
TseFI	GTSAC	3 cut(s)	127, 514, 2550
TseI	GCWGC	5 cut(s)	5, 1190, 2399, 2626, 2798
Tsp45I	GTSAC	3 cut(s)	127, 514, 2550
TspGWI	ACGGA	2 cut(s)	164, 2442
TspRI	CASTG	3 cut(s)	169, 315, 2650
VneI	GTGCAC	1 cut(s)	427
VpaK11BI	GGWCC	4 cut(s)	83, 1326, 1350, 2091
XagI	CCTNNNNNAGG	2 cut(s)	1731, 2360
XapI	RAATTY	4 cut(s)	491, 1454, 2373, 2813
XbaI	TCTAGA	1 cut(s)	1684
XceI	RCATGY	1 cut(s)	631
XhoI	CTCGAG	1 cut(s)	40
XmiI	GTMKAC	2 cut(s)	738, 1180
XmnI	GAANNNNTTC	3 cut(s)	35, 1011, 1991
XspI	CTAG	5 cut(s)	885, 1026, 1433, 1536, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.