Belongs to the universal ribosomal protein uL15 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23290 AT1G70600 |
| fragaria_vesca | FvH4_3g11450 FvH4_4g12340 FvH4_4g25520 |
| malus_domestica | MD09G1026900.v1.1 MD13G1102000.v1.1 MD16G1102500.v1.1 |
| prunus_persica | Prupe.1G243800_v2.0.a1 Prupe.3G291800_v2.0.a1 Prupe.4G102400_v2.0.a1 |
| pyrus_communis | pycom111g02100 pycom13g08910 pycom17g02200 |
| rosa_chinensis | RchiOBHm_Chr2g0172781 RchiOBHm_Chr4g0432911 RchiOBHm_Chr5g0018391 |
| rosa_laevigata | RLG00000006803 RLG00000022138 RLG00000032359 |
| rosa_multiflora | Rmu_sc0004464.1_g000011 Rmu_sc0004464.1_g000012 Rmu_sc0005847.1_g000003 Rmu_sc0010744.1_g000002 Rmu_sc0017459.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00043230 Rroxscaffold_5G00374310 |
| rosa_rugosa | Rorug02G0561600 Rorug04G0263700 |
| rosa_samantha | Rh2AG638700 Rh2BG652200 Rh2CG618500 Rh2DG666400 Rh4AG317800 Rh4BG326000 Rh4CG341100 Rh4DG321100 Rh5AG135500 Rh5BG134100 Rh5CG145800 Rh5DG135400 |
| rosa_wichuraiana | Rw2G052770 Rw4G027630 Rw5G011850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2054 |
| AarI | CACCTGC | 1 cut(s) | 4334 |
| Acc36I | ACCTGC | 3 cut(s) | 1597, 4334, 4873 |
| AccB1I | GGYRCC | 5 cut(s) | 14, 470, 2115, 2939, 5175 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 2411, 4556, 5485, 6085 |
| AccBSI | CCGCTC | 1 cut(s) | 5109 |
| AccI | GTMKAC | 3 cut(s) | 1504, 3450, 5346 |
| AccII | CGCG | 2 cut(s) | 20, 166 |
| AccIII | TCCGGA | 1 cut(s) | 1856 |
| AclI | AACGTT | 1 cut(s) | 2989 |
| AcoI | YGGCCR | 6 cut(s) | 767, 1345, 2505, 2521, 3271, 3307 |
| AcuI | CTGAAG | 9 cut(s) | 759, 1250, 1815, 2574, 2759, 3362, 3415, 3465, 3536 |
| AcyI | GRCGYC | 4 cut(s) | 15, 36, 70, 2116 |
| AdeI | CACNNNGTG | 2 cut(s) | 6099, 6116 |
| AfaI | GTAC | 4 cut(s) | 3257, 4099, 5205, 5762 |
| AfeI | AGCGCT | 3 cut(s) | 50, 509, 6129 |
| AflII | CTTAAG | 1 cut(s) | 3827 |
| AflIII | ACRYGT | 4 cut(s) | 4266, 5156, 5684, 6060 |
| AhlI | ACTAGT | 3 cut(s) | 545, 4316, 4996 |
| AjiI | CACGTC | 1 cut(s) | 5088 |
| AjnI | CCWGG | 8 cut(s) | 402, 1582, 2695, 2921, 4110, 5492, 5696, 6154 |
| AleI | CACNNNNGTG | 2 cut(s) | 4955, 5634 |
| Alw44I | GTGCAC | 4 cut(s) | 672, 2007, 5083, 5627 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2486 |
| Ama87I | CYCGRG | 2 cut(s) | 3835, 4518 |
| Aor13HI | TCCGGA | 1 cut(s) | 1856 |
| Aor51HI | AGCGCT | 3 cut(s) | 50, 509, 6129 |
| ApaLI | GTGCAC | 4 cut(s) | 672, 2007, 5083, 5627 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1396, 1428, 5630, 5662 |
| AseI | ATTAAT | 1 cut(s) | 381 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 2643, 4710, 6129, 6292 |
| AspA2I | CCTAGG | 4 cut(s) | 3200, 5191, 5438, 6400 |
| AsuC2I | CCSGG | 4 cut(s) | 556, 4519, 4520, 6364 |
| AsuII | TTCGAA | 1 cut(s) | 2647 |
| AsuNHI | GCTAGC | 3 cut(s) | 3439, 3935, 6220 |
| AvaI | CYCGRG | 2 cut(s) | 3835, 4518 |
| AvaII | GGWCC | 5 cut(s) | 3367, 4163, 4301, 4379, 4945 |
| AvrII | CCTAGG | 4 cut(s) | 3200, 5191, 5438, 6400 |
| BaeGI | GKGCMC | 6 cut(s) | 676, 2011, 5087, 5631, 5952, 6400 |
| BalI | TGGCCA | 4 cut(s) | 769, 1347, 2523, 3309 |
| BamHI | GGATCC | 2 cut(s) | 3520, 5722 |
| BanI | GGYRCC | 5 cut(s) | 14, 470, 2115, 2939, 5175 |
| BanII | GRGCYC | 6 cut(s) | 2192, 2212, 3208, 3608, 5367, 6317 |
| BauI | CACGAG | 2 cut(s) | 5373, 5853 |
| BbsI | GAAGAC | 3 cut(s) | 1001, 1259, 4776 |
| BbvCI | CCTCAGC | 3 cut(s) | 3588, 4092, 4328 |
| BceAI | ACGGC | 4 cut(s) | 83, 2619, 3258, 5975 |
| BciT130I | CCWGG | 8 cut(s) | 404, 1584, 2697, 2923, 4112, 5494, 5698, 6156 |
| BciVI | GTATCC | 1 cut(s) | 3209 |
| BclI | TGATCA | 4 cut(s) | 3388, 3892, 4105, 4896 |
| BcnI | CCSGG | 4 cut(s) | 556, 4519, 4520, 6364 |
| BcuI | ACTAGT | 3 cut(s) | 545, 4316, 4996 |
| BfmI | CTRYAG | 8 cut(s) | 1176, 1408, 4014, 4341, 4374, 4613, 6142, 6260 |
| BfoI | RGCGCY | 5 cut(s) | 18, 52, 511, 2119, 6131 |
| BfrI | CTTAAG | 1 cut(s) | 3827 |
| BfuAI | ACCTGC | 3 cut(s) | 1597, 4334, 4873 |
| BfuI | GTATCC | 1 cut(s) | 3209 |
| BglII | AGATCT | 3 cut(s) | 2258, 4961, 5035 |
| BlnI | CCTAGG | 4 cut(s) | 3200, 5191, 5438, 6400 |
| BlpI | GCTNAGC | 4 cut(s) | 286, 459, 4128, 5714 |
| Bme18I | GGWCC | 5 cut(s) | 3367, 4163, 4301, 4379, 4945 |
| BmeT110I | CYCGRG | 2 cut(s) | 3835, 4518 |
| BmgBI | CACGTC | 1 cut(s) | 5088 |
| BmrI | ACTGGG | 2 cut(s) | 6073, 6336 |
| BmtI | GCTAGC | 3 cut(s) | 3443, 3939, 6224 |
| BmuI | ACTGGG | 2 cut(s) | 6073, 6336 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5575 |
| BpiI | GAAGAC | 3 cut(s) | 1001, 1259, 4776 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 819, 851 |
| BpmI | CTGGAG | 7 cut(s) | 29, 1774, 4160, 5193, 5735, 5987, 6008 |
| Bpu10I | CCTNAGC | 6 cut(s) | 93, 3588, 3607, 4092, 4328, 4392 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 286, 459, 4128, 5714 |
| Bpu14I | TTCGAA | 1 cut(s) | 2647 |
| BpuEI | CTTGAG | 6 cut(s) | 1408, 1455, 3581, 4200, 5381, 5996 |
| BpuMI | CCSGG | 4 cut(s) | 556, 4519, 4520, 6364 |
| Bsa29I | ATCGAT | 2 cut(s) | 1578, 2058 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1574, 5678 |
| BsaHI | GRCGYC | 4 cut(s) | 15, 36, 70, 2116 |
| BsaI | GGTCTC | 1 cut(s) | 74 |
| BsaWI | WCCGGW | 4 cut(s) | 1485, 1617, 1856, 5172 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 199, 229, 1747, 1777, 5072, 5102 |
| Bse118I | RCCGGY | 1 cut(s) | 2973 |
| Bse3DI | GCAATG | 7 cut(s) | 1209, 2391, 5129, 5243, 5917, 6017, 6149 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1574, 5678 |
| BseAI | TCCGGA | 1 cut(s) | 1856 |
| BseBI | CCWGG | 8 cut(s) | 404, 1584, 2697, 2923, 4112, 5494, 5698, 6156 |
| BseCI | ATCGAT | 2 cut(s) | 1578, 2058 |
| BseJI | GATNNNNATC | 2 cut(s) | 1574, 5678 |
| BseMI | GCAATG | 7 cut(s) | 1209, 2391, 5129, 5243, 5917, 6017, 6149 |
| BseRI | GAGGAG | 5 cut(s) | 2084, 3740, 5159, 6216, 6421 |
| BseSI | GKGCMC | 6 cut(s) | 676, 2011, 5087, 5631, 5952, 6400 |
| BseYI | CCCAGC | 1 cut(s) | 6102 |
| BsgI | GTGCAG | 6 cut(s) | 774, 1625, 1929, 4977, 4998, 5076 |
| Bsh1236I | CGCG | 2 cut(s) | 20, 166 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1729 |
| BshNI | GGYRCC | 5 cut(s) | 14, 470, 2115, 2939, 5175 |
| BshVI | ATCGAT | 2 cut(s) | 1578, 2058 |
| BsiEI | CGRYCG | 1 cut(s) | 1729 |
| BsiHKCI | CYCGRG | 2 cut(s) | 3835, 4518 |
| BsiSI | CCGG | 8 cut(s) | 556, 1486, 1618, 1857, 2974, 4519, 5173, 6364 |
| BslFI | GGGAC | 7 cut(s) | 339, 989, 1088, 4501, 4535, 5486, 6061 |
| BsmBI | CGTCTC | 3 cut(s) | 2125, 2588, 2732 |
| BsmFI | GGGAC | 7 cut(s) | 339, 989, 1088, 4501, 4535, 5486, 6061 |
| BsmI | GAATGC | 5 cut(s) | 591, 634, 1131, 3013, 3100 |
| Bso31I | GGTCTC | 1 cut(s) | 74 |
| BsoBI | CYCGRG | 2 cut(s) | 3835, 4518 |
| Bsp119I | TTCGAA | 1 cut(s) | 2647 |
| Bsp13I | TCCGGA | 1 cut(s) | 1856 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 286, 459, 4128, 5714 |
| Bsp19I | CCATGG | 1 cut(s) | 5076 |
| BspDI | ATCGAT | 2 cut(s) | 1578, 2058 |
| BspEI | TCCGGA | 1 cut(s) | 1856 |
| BspFNI | CGCG | 2 cut(s) | 20, 166 |
| BspHI | TCATGA | 2 cut(s) | 1336, 6169 |
| BspMAI | CTGCAG | 3 cut(s) | 4018, 4345, 4617 |
| BspMI | ACCTGC | 3 cut(s) | 1597, 4334, 4873 |
| BspOI | GCTAGC | 3 cut(s) | 3443, 3939, 6224 |
| BspQI | GCTCTTC | 2 cut(s) | 1425, 2634 |
| BspT104I | TTCGAA | 1 cut(s) | 2647 |
| BspT107I | GGYRCC | 5 cut(s) | 14, 470, 2115, 2939, 5175 |
| BspTI | CTTAAG | 1 cut(s) | 3827 |
| BspTNI | GGTCTC | 1 cut(s) | 74 |
| BsrBI | CCGCTC | 1 cut(s) | 5109 |
| BsrDI | GCAATG | 7 cut(s) | 1209, 2391, 5129, 5243, 5917, 6017, 6149 |
| BsrFI | RCCGGY | 1 cut(s) | 2973 |
| BssAI | RCCGGY | 1 cut(s) | 2973 |
| BssNAI | GTATAC | 1 cut(s) | 1505 |
| BssNI | GRCGYC | 4 cut(s) | 15, 36, 70, 2116 |
| BssSI | CACGAG | 2 cut(s) | 5373, 5853 |
| BssT1I | CCWWGG | 9 cut(s) | 1458, 2442, 3200, 3797, 3944, 5076, 5191, 5438, 6400 |
| Bst1107I | GTATAC | 1 cut(s) | 1505 |
| Bst2BI | CACGAG | 2 cut(s) | 5373, 5853 |
| Bst2UI | CCWGG | 8 cut(s) | 404, 1584, 2697, 2923, 4112, 5494, 5698, 6156 |
| Bst6I | CTCTTC | 6 cut(s) | 189, 900, 1425, 1487, 1710, 2634 |
| BstACI | GRCGYC | 4 cut(s) | 15, 36, 70, 2116 |
| BstAFI | CTTAAG | 1 cut(s) | 3827 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 239, 282, 4688, 6099 |
| BstBI | TTCGAA | 1 cut(s) | 2647 |
| BstDSI | CCRYGG | 3 cut(s) | 3274, 4950, 5076 |
| BstEII | GGTNACC | 2 cut(s) | 911, 3635 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3722 |
| BstFNI | CGCG | 2 cut(s) | 20, 166 |
| BstH2I | RGCGCY | 5 cut(s) | 18, 52, 511, 2119, 6131 |
| BstMCI | CGRYCG | 1 cut(s) | 1729 |
| BstNI | CCWGG | 8 cut(s) | 404, 1584, 2697, 2923, 4112, 5494, 5698, 6156 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5575 |
| BstPI | GGTNACC | 2 cut(s) | 911, 3635 |
| BstSFI | CTRYAG | 8 cut(s) | 1176, 1408, 4014, 4341, 4374, 4613, 6142, 6260 |
| BstSLI | GKGCMC | 6 cut(s) | 676, 2011, 5087, 5631, 5952, 6400 |
| BstUI | CGCG | 2 cut(s) | 20, 166 |
| BstV2I | GAAGAC | 3 cut(s) | 1001, 1259, 4776 |
| BstX2I | RGATCY | 9 cut(s) | 2258, 2446, 2483, 2766, 3520, 4153, 4961, 5035, 5722 |
| BstYI | RGATCY | 9 cut(s) | 2258, 2446, 2483, 2766, 3520, 4153, 4961, 5035, 5722 |
| BstZ17I | GTATAC | 1 cut(s) | 1505 |
| Bsu15I | ATCGAT | 2 cut(s) | 1578, 2058 |
| BsuI | GTATCC | 1 cut(s) | 3209 |
| BsuTUI | ATCGAT | 2 cut(s) | 1578, 2058 |
| BtgI | CCRYGG | 3 cut(s) | 3274, 4950, 5076 |
| BtgZI | GCGATG | 1 cut(s) | 3299 |
| BtrI | CACGTC | 1 cut(s) | 5088 |
| BtsI | GCAGTG | 4 cut(s) | 1540, 1608, 1659, 6211 |
| BveI | ACCTGC | 3 cut(s) | 1597, 4334, 4873 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2486 |
| CciI | TCATGA | 2 cut(s) | 1336, 6169 |
| Cfr10I | RCCGGY | 1 cut(s) | 2973 |
| Cfr9I | CCCGGG | 1 cut(s) | 4518 |
| ClaI | ATCGAT | 2 cut(s) | 1578, 2058 |
| CseI | GACGC | 4 cut(s) | 44, 59, 1539, 1869 |
| CsiI | ACCWGGT | 1 cut(s) | 4110 |
| Csp6I | GTAC | 4 cut(s) | 3256, 4098, 5204, 5761 |
| CviQI | GTAC | 4 cut(s) | 3256, 4098, 5204, 5761 |
| DinI | GGCGCC | 2 cut(s) | 16, 2117 |
| DraIII | CACNNNGTG | 2 cut(s) | 6099, 6116 |
| EaeI | YGGCCR | 6 cut(s) | 767, 1345, 2505, 2521, 3271, 3307 |
| Eam1104I | CTCTTC | 6 cut(s) | 189, 900, 1425, 1487, 1710, 2634 |
| EarI | CTCTTC | 6 cut(s) | 189, 900, 1425, 1487, 1710, 2634 |
| EciI | GGCGGA | 1 cut(s) | 4351 |
| Ecl136II | GAGCTC | 2 cut(s) | 5365, 6315 |
| Eco130I | CCWWGG | 9 cut(s) | 1458, 2442, 3200, 3797, 3944, 5076, 5191, 5438, 6400 |
| Eco24I | GRGCYC | 6 cut(s) | 2192, 2212, 3208, 3608, 5367, 6317 |
| Eco31I | GGTCTC | 1 cut(s) | 74 |
| Eco32I | GATATC | 2 cut(s) | 881, 1478 |
| Eco47I | GGWCC | 5 cut(s) | 3367, 4163, 4301, 4379, 4945 |
| Eco47III | AGCGCT | 3 cut(s) | 50, 509, 6129 |
| Eco53kI | GAGCTC | 2 cut(s) | 5365, 6315 |
| Eco57I | CTGAAG | 9 cut(s) | 759, 1250, 1815, 2574, 2759, 3362, 3415, 3465, 3536 |
| Eco88I | CYCGRG | 2 cut(s) | 3835, 4518 |
| Eco91I | GGTNACC | 2 cut(s) | 911, 3635 |
| EcoICRI | GAGCTC | 2 cut(s) | 5365, 6315 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3722 |
| EcoO109I | RGGNCCY | 5 cut(s) | 4370, 4463, 4945, 5735, 5975 |
| EcoO65I | GGTNACC | 2 cut(s) | 911, 3635 |
| EcoRI | GAATTC | 3 cut(s) | 1697, 1871, 4208 |
| EcoRII | CCWGG | 8 cut(s) | 402, 1582, 2695, 2921, 4110, 5492, 5696, 6154 |
| EcoRV | GATATC | 2 cut(s) | 881, 1478 |
| EcoT14I | CCWWGG | 9 cut(s) | 1458, 2442, 3200, 3797, 3944, 5076, 5191, 5438, 6400 |
| EcoT22I | ATGCAT | 6 cut(s) | 244, 634, 843, 3791, 4012, 4593 |
| EcoT38I | GRGCYC | 6 cut(s) | 2192, 2212, 3208, 3608, 5367, 6317 |
| EgeI | GGCGCC | 2 cut(s) | 16, 2117 |
| EheI | GGCGCC | 2 cut(s) | 16, 2117 |
| ErhI | CCWWGG | 9 cut(s) | 1458, 2442, 3200, 3797, 3944, 5076, 5191, 5438, 6400 |
| Esp3I | CGTCTC | 3 cut(s) | 2125, 2588, 2732 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 5022, 5054, 5271, 5303 |
| FaqI | GGGAC | 7 cut(s) | 339, 989, 1088, 4501, 4535, 5486, 6061 |
| FauI | CCCGC | 5 cut(s) | 924, 1314, 1809, 3150, 6372 |
| FauNDI | CATATG | 3 cut(s) | 130, 1212, 4693 |
| FbaI | TGATCA | 4 cut(s) | 3388, 3892, 4105, 4896 |
| FblI | GTMKAC | 3 cut(s) | 1504, 3450, 5346 |
| FriOI | GRGCYC | 6 cut(s) | 2192, 2212, 3208, 3608, 5367, 6317 |
| GsaI | CCCAGC | 1 cut(s) | 6106 |
| GsuI | CTGGAG | 7 cut(s) | 29, 1774, 4160, 5193, 5735, 5987, 6008 |
| HaeII | RGCGCY | 5 cut(s) | 18, 52, 511, 2119, 6131 |
| HapII | CCGG | 8 cut(s) | 556, 1486, 1618, 1857, 2974, 4519, 5173, 6364 |
| HgaI | GACGC | 4 cut(s) | 44, 59, 1539, 1869 |
| Hin1I | GRCGYC | 4 cut(s) | 15, 36, 70, 2116 |
| HincII | GTYRAC | 3 cut(s) | 4793, 5241, 5580 |
| HindII | GTYRAC | 3 cut(s) | 4793, 5241, 5580 |
| HindIII | AAGCTT | 3 cut(s) | 260, 965, 5769 |
| HpaII | CCGG | 8 cut(s) | 556, 1486, 1618, 1857, 2974, 4519, 5173, 6364 |
| Hpy99I | CGWCG | 4 cut(s) | 75, 537, 1647, 5092 |
| HpyCH4IV | ACGT | 3 cut(s) | 2293, 2989, 5087 |
| HpySE526I | ACGT | 3 cut(s) | 2293, 2989, 5087 |
| Hsp92I | GRCGYC | 4 cut(s) | 15, 36, 70, 2116 |
| KasI | GGCGCC | 2 cut(s) | 14, 2115 |
| Kpn2I | TCCGGA | 1 cut(s) | 1856 |
| Ksp22I | TGATCA | 4 cut(s) | 3388, 3892, 4105, 4896 |
| LguI | GCTCTTC | 2 cut(s) | 1425, 2634 |
| MabI | ACCWGGT | 1 cut(s) | 4110 |
| MaeII | ACGT | 3 cut(s) | 2293, 2989, 5087 |
| MbiI | CCGCTC | 1 cut(s) | 5109 |
| MfeI | CAATTG | 4 cut(s) | 1374, 2409, 4101, 4158 |
| MflI | RGATCY | 9 cut(s) | 2258, 2446, 2483, 2766, 3520, 4153, 4961, 5035, 5722 |
| MlsI | TGGCCA | 4 cut(s) | 769, 1347, 2523, 3309 |
| MluNI | TGGCCA | 4 cut(s) | 769, 1347, 2523, 3309 |
| Mly113I | GGCGCC | 2 cut(s) | 15, 2116 |
| MmeI | TCCRAC | 8 cut(s) | 856, 1168, 1507, 1879, 4190, 5466, 5503, 6102 |
| Mox20I | TGGCCA | 4 cut(s) | 769, 1347, 2523, 3309 |
| Mph1103I | ATGCAT | 6 cut(s) | 244, 634, 843, 3791, 4012, 4593 |
| MroI | TCCGGA | 1 cut(s) | 1856 |
| MroXI | GAANNNNTTC | 4 cut(s) | 2643, 4710, 6129, 6292 |
| MscI | TGGCCA | 4 cut(s) | 769, 1347, 2523, 3309 |
| Msp20I | TGGCCA | 4 cut(s) | 769, 1347, 2523, 3309 |
| MspA1I | CMGCKG | 5 cut(s) | 3227, 4132, 4226, 4332, 6393 |
| MspCI | CTTAAG | 1 cut(s) | 3827 |
| MspI | CCGG | 8 cut(s) | 556, 1486, 1618, 1857, 2974, 4519, 5173, 6364 |
| MunI | CAATTG | 4 cut(s) | 1374, 2409, 4101, 4158 |
| Mva1269I | GAATGC | 5 cut(s) | 591, 634, 1131, 3013, 3100 |
| MvaI | CCWGG | 8 cut(s) | 404, 1584, 2697, 2923, 4112, 5494, 5698, 6156 |
| MvnI | CGCG | 2 cut(s) | 20, 166 |
| NarI | GGCGCC | 2 cut(s) | 15, 2116 |
| NciI | CCSGG | 4 cut(s) | 556, 4519, 4520, 6364 |
| NcoI | CCATGG | 1 cut(s) | 5076 |
| NdeI | CATATG | 3 cut(s) | 130, 1212, 4693 |
| NheI | GCTAGC | 3 cut(s) | 3439, 3935, 6220 |
| NsiI | ATGCAT | 6 cut(s) | 244, 634, 843, 3791, 4012, 4593 |
| NspV | TTCGAA | 1 cut(s) | 2647 |
| OliI | CACNNNNGTG | 2 cut(s) | 4955, 5634 |
| PaeI | GCATGC | 3 cut(s) | 2544, 2704, 5437 |
| PagI | TCATGA | 2 cut(s) | 1336, 6169 |
| PaqCI | CACCTGC | 1 cut(s) | 4334 |
| PciI | ACATGT | 4 cut(s) | 4266, 5156, 5684, 6060 |
| PciSI | GCTCTTC | 2 cut(s) | 1425, 2634 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2564 |
| PctI | GAATGC | 5 cut(s) | 591, 634, 1131, 3013, 3100 |
| PdmI | GAANNNNTTC | 4 cut(s) | 2643, 4710, 6129, 6292 |
| PflFI | GACNNNGTC | 1 cut(s) | 2087 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 2411, 4556, 5485, 6085 |
| PfoI | TCCNGGA | 1 cut(s) | 5492 |
| PluTI | GGCGCC | 2 cut(s) | 18, 2119 |
| PpuMI | RGGWCCY | 1 cut(s) | 4945 |
| PscI | ACATGT | 4 cut(s) | 4266, 5156, 5684, 6060 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5575 |
| PshBI | ATTAAT | 1 cut(s) | 381 |
| PsiI | TTATAA | 1 cut(s) | 2054 |
| Psp124BI | GAGCTC | 2 cut(s) | 5367, 6317 |
| Psp1406I | AACGTT | 1 cut(s) | 2989 |
| Psp5II | RGGWCCY | 1 cut(s) | 4945 |
| Psp6I | CCWGG | 8 cut(s) | 402, 1582, 2695, 2921, 4110, 5492, 5696, 6154 |
| PspEI | GGTNACC | 2 cut(s) | 911, 3635 |
| PspFI | CCCAGC | 1 cut(s) | 6102 |
| PspGI | CCWGG | 8 cut(s) | 402, 1582, 2695, 2921, 4110, 5492, 5696, 6154 |
| PspPPI | RGGWCCY | 1 cut(s) | 4945 |
| PstI | CTGCAG | 3 cut(s) | 4018, 4345, 4617 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2486 |
| PsuI | RGATCY | 9 cut(s) | 2258, 2446, 2483, 2766, 3520, 4153, 4961, 5035, 5722 |
| PsyI | GACNNNGTC | 1 cut(s) | 2087 |
| PvuII | CAGCTG | 4 cut(s) | 3227, 4226, 4332, 6393 |
| RsaI | GTAC | 4 cut(s) | 3257, 4099, 5205, 5762 |
| RsaNI | GTAC | 4 cut(s) | 3256, 4098, 5204, 5761 |
| SacI | GAGCTC | 2 cut(s) | 5367, 6317 |
| SapI | GCTCTTC | 2 cut(s) | 1425, 2634 |
| SexAI | ACCWGGT | 1 cut(s) | 4110 |
| SfcI | CTRYAG | 8 cut(s) | 1176, 1408, 4014, 4341, 4374, 4613, 6142, 6260 |
| SfoI | GGCGCC | 2 cut(s) | 16, 2117 |
| SfuI | TTCGAA | 1 cut(s) | 2647 |
| SinI | GGWCC | 5 cut(s) | 3367, 4163, 4301, 4379, 4945 |
| SmaI | CCCGGG | 1 cut(s) | 4520 |
| SmlI | CTYRAG | 7 cut(s) | 1387, 1470, 3560, 3827, 4215, 5360, 6011 |
| SmoI | CTYRAG | 7 cut(s) | 1387, 1470, 3560, 3827, 4215, 5360, 6011 |
| SpeI | ACTAGT | 3 cut(s) | 545, 4316, 4996 |
| SphI | GCATGC | 3 cut(s) | 2544, 2704, 5437 |
| SspDI | GGCGCC | 2 cut(s) | 14, 2115 |
| SspI | AATATT | 2 cut(s) | 1326, 2181 |
| SstI | GAGCTC | 2 cut(s) | 5367, 6317 |
| StyI | CCWWGG | 9 cut(s) | 1458, 2442, 3200, 3797, 3944, 5076, 5191, 5438, 6400 |
| TaiI | ACGT | 3 cut(s) | 2296, 2992, 5090 |
| TaqI | TCGA | 9 cut(s) | 1402, 1451, 1578, 2058, 2647, 4754, 5041, 5090, 5429 |
| TaqII | GACCGA | 3 cut(s) | 1715, 3003, 5400 |
| TatI | WGTACW | 1 cut(s) | 3255 |
| TauI | GCSGC | 7 cut(s) | 20, 169, 2507, 3886, 5109, 5137, 6204 |
| TspGWI | ACGGA | 9 cut(s) | 1838, 1865, 2573, 2612, 2714, 3527, 4293, 5345, 5632 |
| TspMI | CCCGGG | 1 cut(s) | 4518 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2087 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 2411, 4556, 5485, 6085 |
| Vha464I | CTTAAG | 1 cut(s) | 3827 |
| VneI | GTGCAC | 4 cut(s) | 672, 2007, 5083, 5627 |
| VpaK11BI | GGWCC | 5 cut(s) | 3367, 4163, 4301, 4379, 4945 |
| VspI | ATTAAT | 1 cut(s) | 381 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3722 |
| XbaI | TCTAGA | 2 cut(s) | 187, 6338 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 95, 3097 |
| XmaI | CCCGGG | 1 cut(s) | 4518 |
| XmaJI | CCTAGG | 4 cut(s) | 3200, 5191, 5438, 6400 |
| XmiI | GTMKAC | 3 cut(s) | 1504, 3450, 5346 |
| XmnI | GAANNNNTTC | 4 cut(s) | 2643, 4710, 6129, 6292 |
| Zsp2I | ATGCAT | 6 cut(s) | 244, 634, 843, 3791, 4012, 4593 |