Rorug04G0263700

structural constituent of ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0002131
Physical Location & Seq
Forward (+)
43526287 .. 43528250
1964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0263700.1

Sequence Viewer

Length: 1320 bp
ATGATGGAAGGAATCAAAGGCTTAGGAGGAGGAGGGAAGGTTGCCATTGGTGTTGGCAATGGTGTTGGTCACGACCAGATTATTCAGGATCAAGACATGGGAGATGGAATGCAGTGCAGTGACCATCCTTACAGAAACAACCCAGGTGGGATCTGCGCTTTCTGTCTCCAAGAGAAGCTCGGCAAGCTCGTCTCTTCCTCCTTCCCTCTCCCCGTTCGTAACTCCGCCTCTTCTTCCTCCTCTCCTTCTTTTAGATCTGACATCACCGGCGCCACCAATGCCGGCGGTGTCAGCGTCGCCGCTCCTTCCTCTACCTCCCTCTCGCTCTCGCTCTCGGTCCGTCCCAAAGCCAACGGCGAGTCGTTTCATCACGACGAGTATTACAGCCGGCGGGCCAGGATCTCGTTCCTTCTGGCCAGGAAGAAGAAGAAGGTGACTGCTAATGCTTCCTCTGATAGTCAGAGCCGCGCCGCCGATATGGTTTTCAAGAGGAGCAAGTCGACCGCAACGCCTCGGAGGGGCCGTTTCATGGATGCCGCTGACGACTTTAGCCCCAGAAAGAGAAATGGGTTCTGGTCCTTTCTCTACCACCACCACAAAACTTCCAAGAAAATCGACAACAAGAGCTTCAGAGACAACTCCAAGATTTCTTCCTCCTCCTCCTTCGCATCTTCGGCCACAGCAACAGCAACAACAACAACAACAACAACAGCAGCTGGAAGGGACAAGTCTTTGGGCTCTTCTCTGAGGAATAAAGCCGAAACCGCGGTGGGTGACGTTGAAGACGACAGCAGTCCCAACAGCCAAGCCACTGCTTCAGCCTCTTCGTTCGAGCGGAAGGTCTCCAGATCCAGATCTGTCGGCTGCGGCAGCCGGAGCTTCTCCGGCGACTTTTTCGAGCGGATCTCGACTGGTTTCGGCGACTGCACTCTCAGAAGGGTCGAGTCTCAAAGAGAAGGCAAGCCTAAACACTCCTCATCATCAGCAGTTCGCAACGGCGCCGAGCGTGTCAAATGTGGTGGGCTTTTCAGTGGGTTCATGATGACTTCATCTTCTTCATCCTCTTCGTCTTCCTCGTATTGGGTCTCCTCCTCAGCCGAAGACATGAACGGGAAGCCAATGTCCGGTGGTCCCGGGCCGCTAGTCAACGGGAGAAGCAGGAGCAGCTGGGGTTGGGCCTTCGCTAGCCCCATGAGAGCTTTCAGCAAACCTTCTTCGAAAGACGGGAAGAGGGACATTGTTAGACAAGCGAATACTTCAGATAAGAACACCACCCCTAACTTGTCTGCAATTCCTTCCTTGCTATCTGTGAGAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000956 GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0006139 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0015031 GO:0015833 GO:0015934 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0019538 GO:0022625 GO:0022626 GO:0030684 GO:0030687 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0034641 GO:0034645 GO:0034655 GO:0042886 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048519 GO:0050789 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03010 ko04340 map03010 map04340
Pfam Domains
Protein Families
Ribosomal_L27A

Protein Analysis

439

Amino Acids

46.54

Weight (kDa)

10.13

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 269, 998
AccBSI CCGCTC 3 cut(s) 302, 835, 901
AccI GTMKAC 1 cut(s) 500
AccII CGCG 2 cut(s) 468, 767
AclWI GGATC 5 cut(s) 96, 158, 407, 843, 911
AcoI YGGCCR 2 cut(s) 414, 675
AcuI CTGAAG 3 cut(s) 613, 801, 1242
AcyI GRCGYC 2 cut(s) 270, 999
AfiI CCNNNNNNNGG 4 cut(s) 518, 529, 1080, 1124
AgsI TTSAA 2 cut(s) 487, 782
AjnI CCWGG 3 cut(s) 142, 395, 416
AluBI AGCT 7 cut(s) 178, 187, 627, 716, 879, 1167, 1199
AluI AGCT 7 cut(s) 178, 187, 627, 716, 879, 1167, 1199
Alw26I GTCTC 6 cut(s) 170, 196, 627, 847, 951, 1090
AlwI GGATC 5 cut(s) 96, 158, 407, 843, 911
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 1 cut(s) 1133
AoxI GGCC 6 cut(s) 393, 414, 520, 675, 1136, 1176
ApeKI GCWGC 4 cut(s) 713, 864, 870, 1164
AspLEI GCGC 4 cut(s) 158, 272, 470, 1001
AspS9I GGNCC 7 cut(s) 337, 393, 520, 576, 1130, 1136, 1176
AsuC2I CCSGG 2 cut(s) 1134, 1135
AsuHPI GGTGA 3 cut(s) 256, 445, 785
AsuII TTCGAA 1 cut(s) 1217
AsuNHI GCTAGC 1 cut(s) 1184
AvaI CYCGRG 1 cut(s) 1133
AvaII GGWCC 3 cut(s) 337, 576, 1130
BalI TGGCCA 1 cut(s) 416
BanI GGYRCC 2 cut(s) 269, 998
BanII GRGCYC 1 cut(s) 740
BbsI GAAGAC 3 cut(s) 789, 1062, 1107
BbvCI CCTCAGC 1 cut(s) 1093
BbvI GCAGC 4 cut(s) 725, 851, 882, 1176
BccI CCATC 2 cut(s) 98, 132
BceAI ACGGC 3 cut(s) 370, 507, 1012
BciT130I CCWGG 3 cut(s) 144, 397, 418
BcnI CCSGG 2 cut(s) 1134, 1135
BcoDI GTCTC 6 cut(s) 170, 196, 627, 847, 951, 1090
BfaI CTAG 2 cut(s) 1142, 1185
BfoI RGCGCY 2 cut(s) 273, 1002
BglII AGATCT 2 cut(s) 254, 854
Bme1390I CCNGG 5 cut(s) 144, 397, 418, 1134, 1135
Bme18I GGWCC 3 cut(s) 337, 576, 1130
BmeT110I CYCGRG 1 cut(s) 1133
BmgT120I GGNCC 7 cut(s) 337, 393, 520, 576, 1130, 1136, 1176
BmiI GGNNCC 4 cut(s) 271, 521, 1000, 1132
BmrFI CCNGG 5 cut(s) 144, 397, 418, 1134, 1135
BmsI GCATC 2 cut(s) 523, 677
BmtI GCTAGC 1 cut(s) 1188
BoxI GACNNNNGTC 1 cut(s) 792
BpiI GAAGAC 3 cut(s) 789, 1062, 1107
BplI GAGNNNNNCTC 2 cut(s) 890, 922
BpmI CTGGAG 1 cut(s) 829
Bpu10I CCTNAGC 2 cut(s) 22, 1093
Bpu14I TTCGAA 1 cut(s) 1217
BpuMI CCSGG 2 cut(s) 1134, 1135
BsaBI GATNNNNATC 1 cut(s) 853
BsaHI GRCGYC 2 cut(s) 270, 999
BsaI GGTCTC 2 cut(s) 847, 1090
BsaJI CCNNGG 4 cut(s) 142, 512, 765, 1133
BsaWI WCCGGW 1 cut(s) 1124
BsaXI ACNNNNNCTCC 4 cut(s) 24, 54, 508, 538
Bsc4I CCNNNNNNNGG 4 cut(s) 518, 529, 1080, 1124
Bse118I RCCGGY 3 cut(s) 266, 281, 387
Bse1I ACTGG 1 cut(s) 916
Bse3DI GCAATG 1 cut(s) 64
Bse8I GATNNNNATC 1 cut(s) 853
BseBI CCWGG 3 cut(s) 144, 397, 418
BseDI CCNNGG 4 cut(s) 142, 512, 765, 1133
BseGI GGATG 3 cut(s) 124, 538, 1058
BseJI GATNNNNATC 1 cut(s) 853
BseLI CCNNNNNNNGG 4 cut(s) 518, 529, 1080, 1124
BseMI GCAATG 1 cut(s) 64
BseMII CTCAG 3 cut(s) 737, 946, 1107
BseNI ACTGG 1 cut(s) 916
BseRI GAGGAG 9 cut(s) 42, 45, 229, 505, 646, 649, 964, 1078, 1081
BseXI GCAGC 4 cut(s) 725, 851, 882, 1176
BseYI CCCAGC 1 cut(s) 1167
BsgI GTGCAG 2 cut(s) 136, 910
Bsh1236I CGCG 2 cut(s) 468, 767
Bsh1285I CGRYCG 1 cut(s) 504
BshFI GGCC 6 cut(s) 395, 416, 522, 677, 1138, 1178
BshNI GGYRCC 2 cut(s) 269, 998
BsiEI CGRYCG 1 cut(s) 504
BsiHKCI CYCGRG 1 cut(s) 1133
BsiSI CCGG 7 cut(s) 267, 282, 388, 874, 885, 1125, 1134
BslFI GGGAC 5 cut(s) 327, 737, 780, 1116, 1247
BslI CCNNNNNNNGG 4 cut(s) 518, 529, 1080, 1124
BsmAI GTCTC 6 cut(s) 170, 196, 627, 847, 951, 1090
BsmBI CGTCTC 1 cut(s) 196
BsmFI GGGAC 5 cut(s) 327, 737, 780, 1116, 1247
BsmI GAATGC 1 cut(s) 114
BsnI GGCC 6 cut(s) 395, 416, 522, 677, 1138, 1178
Bso31I GGTCTC 2 cut(s) 847, 1090
BsoBI CYCGRG 1 cut(s) 1133
Bsp119I TTCGAA 1 cut(s) 1217
Bsp1286I GDGCHC 1 cut(s) 740
Bsp143I GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
BspANI GGCC 6 cut(s) 395, 416, 522, 677, 1138, 1178
BspCNI CTCAG 3 cut(s) 738, 945, 1106
BspFNI CGCG 2 cut(s) 468, 767
BspHI TCATGA 1 cut(s) 1038
BspLI GGNNCC 4 cut(s) 271, 521, 1000, 1132
BspOI GCTAGC 1 cut(s) 1188
BspPI GGATC 5 cut(s) 96, 158, 407, 843, 911
BspQI GCTCTTC 1 cut(s) 745
BspT104I TTCGAA 1 cut(s) 1217
BspT107I GGYRCC 2 cut(s) 269, 998
BspTNI GGTCTC 2 cut(s) 847, 1090
BsrBI CCGCTC 3 cut(s) 302, 835, 901
BsrDI GCAATG 1 cut(s) 64
BsrFI RCCGGY 3 cut(s) 266, 281, 387
BsrI ACTGG 1 cut(s) 916
BssAI RCCGGY 3 cut(s) 266, 281, 387
BssECI CCNNGG 4 cut(s) 142, 512, 765, 1133
BssMI GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
BssNI GRCGYC 2 cut(s) 270, 999
Bst2UI CCWGG 3 cut(s) 144, 397, 418
Bst6I CTCTTC 6 cut(s) 199, 235, 745, 829, 1069, 1223
BstACI GRCGYC 2 cut(s) 270, 999
BstBI TTCGAA 1 cut(s) 1217
BstC8I GCNNGC 6 cut(s) 185, 283, 389, 393, 962, 1186
BstDEI CTNAG 4 cut(s) 22, 746, 932, 1093
BstDSI CCRYGG 1 cut(s) 765
BstF5I GGATG 3 cut(s) 124, 538, 1058
BstFNI CGCG 2 cut(s) 468, 767
BstH2I RGCGCY 2 cut(s) 273, 1002
BstHHI GCGC 4 cut(s) 158, 272, 470, 1001
BstKTI GATC 7 cut(s) 91, 153, 257, 402, 851, 857, 906
BstMAI GTCTC 6 cut(s) 170, 196, 627, 847, 951, 1090
BstMBI GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
BstMCI CGRYCG 1 cut(s) 504
BstMWI GCNNNNNNNGC 9 cut(s) 184, 278, 291, 674, 764, 870, 876, 885, 1164
BstNI CCWGG 3 cut(s) 144, 397, 418
BstPAI GACNNNNGTC 1 cut(s) 792
BstSCI CCNGG 5 cut(s) 142, 395, 416, 1132, 1133
BstUI CGCG 2 cut(s) 468, 767
BstV1I GCAGC 4 cut(s) 725, 851, 882, 1176
BstV2I GAAGAC 3 cut(s) 789, 1062, 1107
BstX2I RGATCY 6 cut(s) 150, 254, 399, 848, 854, 903
BstYI RGATCY 6 cut(s) 150, 254, 399, 848, 854, 903
BsuRI GGCC 6 cut(s) 395, 416, 522, 677, 1138, 1178
BtgI CCRYGG 1 cut(s) 765
BtsCI GGATG 3 cut(s) 124, 538, 1058
BtsI GCAGTG 3 cut(s) 119, 124, 810
BtsIMutI CAGTG 4 cut(s) 119, 124, 810, 1036
Cac8I GCNNGC 6 cut(s) 185, 283, 389, 393, 962, 1186
CaiI CAGNNNCTG 1 cut(s) 716
CciI TCATGA 1 cut(s) 1038
CfoI GCGC 4 cut(s) 158, 272, 470, 1001
Cfr10I RCCGGY 3 cut(s) 266, 281, 387
Cfr13I GGNCC 7 cut(s) 337, 393, 520, 576, 1130, 1136, 1176
Cfr42I CCGCGG 1 cut(s) 768
Cfr9I CCCGGG 1 cut(s) 1133
CpoI CGGWCCG 1 cut(s) 337
CseI GACGC 1 cut(s) 283
CspCI CAANNNNNGTGG 4 cut(s) 127, 162, 1000, 1035
CspI CGGWCCG 1 cut(s) 337
CviAII CATG 5 cut(s) 97, 529, 1039, 1105, 1192
DdeI CTNAG 4 cut(s) 22, 746, 932, 1093
DinI GGCGCC 2 cut(s) 271, 1000
DpnI GATC 7 cut(s) 90, 152, 256, 401, 850, 856, 905
DpnII GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
EaeI YGGCCR 2 cut(s) 414, 675
Eam1104I CTCTTC 6 cut(s) 199, 235, 745, 829, 1069, 1223
EarI CTCTTC 6 cut(s) 199, 235, 745, 829, 1069, 1223
EciI GGCGGA 1 cut(s) 214
Eco24I GRGCYC 1 cut(s) 740
Eco31I GGTCTC 2 cut(s) 847, 1090
Eco47I GGWCC 3 cut(s) 337, 576, 1130
Eco57I CTGAAG 3 cut(s) 613, 801, 1242
Eco88I CYCGRG 1 cut(s) 1133
EcoRII CCWGG 3 cut(s) 142, 395, 416
EcoT38I GRGCYC 1 cut(s) 740
EgeI GGCGCC 2 cut(s) 271, 1000
EheI GGCGCC 2 cut(s) 271, 1000
Esp3I CGTCTC 1 cut(s) 196
FaeI CATG 5 cut(s) 100, 532, 1042, 1108, 1195
FaiI YATR 6 cut(s) 98, 479, 530, 1040, 1106, 1193
FaqI GGGAC 5 cut(s) 327, 737, 780, 1116, 1247
FatI CATG 5 cut(s) 96, 528, 1038, 1104, 1191
FauI CCCGC 1 cut(s) 384
FblI GTMKAC 1 cut(s) 500
FokI GGATG 3 cut(s) 111, 545, 1045
FriOI GRGCYC 1 cut(s) 740
FspBI CTAG 2 cut(s) 1142, 1185
GlaI GCGC 4 cut(s) 157, 271, 469, 1000
GsaI CCCAGC 1 cut(s) 1171
GsuI CTGGAG 1 cut(s) 829
HaeII RGCGCY 2 cut(s) 273, 1002
HaeIII GGCC 6 cut(s) 395, 416, 522, 677, 1138, 1178
HapII CCGG 7 cut(s) 267, 282, 388, 874, 885, 1125, 1134
HgaI GACGC 1 cut(s) 283
HhaI GCGC 4 cut(s) 158, 272, 470, 1001
Hin1I GRCGYC 2 cut(s) 270, 999
Hin1II CATG 5 cut(s) 100, 532, 1042, 1108, 1195
Hin6I GCGC 4 cut(s) 156, 270, 468, 999
HinP1I GCGC 4 cut(s) 156, 270, 468, 999
HincII GTYRAC 2 cut(s) 501, 1147
HindII GTYRAC 2 cut(s) 501, 1147
HinfI GANTC 3 cut(s) 12, 359, 944
HpaII CCGG 7 cut(s) 267, 282, 388, 874, 885, 1125, 1134
HphI GGTGA 3 cut(s) 256, 445, 785
Hpy166II GTNNAC 2 cut(s) 501, 1147
Hpy188I TCNGA 8 cut(s) 259, 454, 462, 516, 632, 747, 935, 1261
Hpy188III TCNNGA 9 cut(s) 71, 86, 92, 371, 487, 846, 852, 907, 1039
Hpy8I GTNNAC 2 cut(s) 501, 1147
Hpy99I CGWCG 2 cut(s) 299, 377
HpyCH4IV ACGT 1 cut(s) 777
HpyCH4V TGCA 4 cut(s) 112, 117, 927, 1289
HpyF10VI GCNNNNNNNGC 9 cut(s) 184, 278, 291, 674, 764, 870, 876, 885, 1164
HpyF3I CTNAG 4 cut(s) 22, 746, 932, 1093
HpySE526I ACGT 1 cut(s) 777
Hsp92I GRCGYC 2 cut(s) 270, 999
Hsp92II CATG 5 cut(s) 100, 532, 1042, 1108, 1195
HspAI GCGC 4 cut(s) 156, 270, 468, 999
KasI GGCGCC 2 cut(s) 269, 998
KroI GCCGGC 2 cut(s) 281, 387
KroNI GCCGGC 2 cut(s) 283, 389
KspI CCGCGG 1 cut(s) 768
Kzo9I GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
LguI GCTCTTC 1 cut(s) 745
LmnI GCTCC 4 cut(s) 307, 492, 876, 1161
Lsp1109I GCAGC 4 cut(s) 725, 851, 882, 1176
LweI GCATC 2 cut(s) 523, 677
MaeI CTAG 2 cut(s) 1142, 1185
MaeII ACGT 1 cut(s) 777
MaeIII GTNAC 5 cut(s) 68, 119, 218, 433, 773
MalI GATC 7 cut(s) 90, 152, 256, 401, 850, 856, 905
MbiI CCGCTC 3 cut(s) 302, 835, 901
MboI GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
MflI RGATCY 6 cut(s) 150, 254, 399, 848, 854, 903
MhlI GDGCHC 1 cut(s) 740
MlsI TGGCCA 1 cut(s) 416
MluCI AATT 1 cut(s) 1290
MluNI TGGCCA 1 cut(s) 416
Mly113I GGCGCC 2 cut(s) 270, 999
MlyI GAGTC 2 cut(s) 368, 953
Mox20I TGGCCA 1 cut(s) 416
MroNI GCCGGC 2 cut(s) 281, 387
MscI TGGCCA 1 cut(s) 416
Msp20I TGGCCA 1 cut(s) 416
MspA1I CMGCKG 4 cut(s) 539, 716, 767, 1167
MspI CCGG 7 cut(s) 267, 282, 388, 874, 885, 1125, 1134
MspR9I CCNGG 5 cut(s) 144, 397, 418, 1134, 1135
Mva1269I GAATGC 1 cut(s) 114
MvaI CCWGG 3 cut(s) 144, 397, 418
MvnI CGCG 2 cut(s) 468, 767
MwoI GCNNNNNNNGC 9 cut(s) 184, 278, 291, 674, 764, 870, 876, 885, 1164
NaeI GCCGGC 2 cut(s) 283, 389
NarI GGCGCC 2 cut(s) 270, 999
NciI CCSGG 2 cut(s) 1134, 1135
NdeII GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
NgoMIV GCCGGC 2 cut(s) 281, 387
NheI GCTAGC 1 cut(s) 1184
NlaIII CATG 5 cut(s) 100, 532, 1042, 1108, 1195
NlaIV GGNNCC 4 cut(s) 271, 521, 1000, 1132
NmeAIII GCCGAG 2 cut(s) 159, 1027
NmuCI GTSAC 4 cut(s) 68, 119, 433, 773
NspV TTCGAA 1 cut(s) 1217
PagI TCATGA 1 cut(s) 1038
PciSI GCTCTTC 1 cut(s) 745
PcsI WCGNNNNNNNCGW 4 cut(s) 186, 520, 783, 1073
PctI GAATGC 1 cut(s) 114
PdiI GCCGGC 2 cut(s) 283, 389
PfeI GAWTC 1 cut(s) 12
PleI GAGTC 2 cut(s) 367, 952
PluTI GGCGCC 2 cut(s) 273, 1002
PpsI GAGTC 2 cut(s) 367, 952
PshAI GACNNNNGTC 1 cut(s) 792
Psp6I CCWGG 3 cut(s) 142, 395, 416
PspFI CCCAGC 1 cut(s) 1167
PspGI CCWGG 3 cut(s) 142, 395, 416
PspN4I GGNNCC 4 cut(s) 271, 521, 1000, 1132
PspPI GGNCC 7 cut(s) 337, 393, 520, 576, 1130, 1136, 1176
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 6 cut(s) 150, 254, 399, 848, 854, 903
PvuII CAGCTG 2 cut(s) 716, 1167
Rsr2I CGGWCCG 1 cut(s) 337
RsrII CGGWCCG 1 cut(s) 337
SacII CCGCGG 1 cut(s) 768
SalI GTCGAC 1 cut(s) 499
SapI GCTCTTC 1 cut(s) 745
Sau3AI GATC 7 cut(s) 88, 150, 254, 399, 848, 854, 903
Sau96I GGNCC 7 cut(s) 337, 393, 520, 576, 1130, 1136, 1176
SchI GAGTC 2 cut(s) 368, 953
ScrFI CCNGG 5 cut(s) 144, 397, 418, 1134, 1135
SduI GDGCHC 1 cut(s) 740
SfaNI GCATC 2 cut(s) 523, 677
SfoI GGCGCC 2 cut(s) 271, 1000
Sfr303I CCGCGG 1 cut(s) 768
SfuI TTCGAA 1 cut(s) 1217
SgrAI CRCCGGYG 1 cut(s) 266
SgrBI CCGCGG 1 cut(s) 768
SinI GGWCC 3 cut(s) 337, 576, 1130
SmaI CCCGGG 1 cut(s) 1135
Sse9I AATT 1 cut(s) 1290
SspDI GGCGCC 2 cut(s) 269, 998
SspMI CTAG 2 cut(s) 1142, 1185
StyD4I CCNGG 5 cut(s) 142, 395, 416, 1132, 1133
TaiI ACGT 1 cut(s) 780
TaqI TCGA 7 cut(s) 500, 615, 831, 897, 908, 942, 1217
TaqII GACCGA 1 cut(s) 325
TasI AATT 1 cut(s) 1290
TauI GCSGC 6 cut(s) 302, 468, 473, 539, 870, 1141
TfiI GAWTC 1 cut(s) 12
TscAI CASTG 4 cut(s) 119, 124, 817, 1036
TseFI GTSAC 4 cut(s) 68, 119, 433, 773
TseI GCWGC 4 cut(s) 713, 864, 870, 1164
Tsp45I GTSAC 4 cut(s) 68, 119, 433, 773
TspDTI ATGAA 6 cut(s) 356, 517, 1027, 1038, 1047, 1121
TspGWI ACGGA 1 cut(s) 329
TspMI CCCGGG 1 cut(s) 1133
TspRI CASTG 4 cut(s) 119, 124, 817, 1036
VpaK11BI GGWCC 3 cut(s) 337, 576, 1130
XmaI CCCGGG 1 cut(s) 1133
XmiI GTMKAC 1 cut(s) 500
XspI CTAG 2 cut(s) 1142, 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.