Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001834

Physical Location & Seq

Genomic Coordinates Forward (+)

75940508 .. 75943393

Gene Structure 2886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0651600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGCTGCCCATGTCCAGCGGCGCCGTTTGGATGAACAGAGAGGGAGAAGACGCAGTTTCTTCTTGGACCAGCAACCCCCATAACAACAATGAAACAGAGCCCAAAGACCTGACCTTGGCCAGCTTCAAAGCCATGTTAGAAGGTGACTGGTACATGAACAACAACAACAACAACGTCGTCCTCAACCAAGACAACATTAACTGCTTCTCTTCCAACCCCTTTCAAATGGACACCTCCGCTTCTTGCTCTCCGTCCAGGGCATTTACTCTTTTAAATTCAAATTCAAATCCCAATCCCAACTCCAAATCCTGCTTCTCTACTCTCCCTAACTCTAATCCATTCGATAACAATTTCAATTTGGTTGGCGAAAGTGAGCTCTTGACCCAGCTTCAGCAGCAAAATGAAGCTTTGATGAACTTGGCAGCTCTTAATCCTCACTCCCAGGTGGCTGCTACTCCTGCACTCAGTTCCGGCACCGAGTTCCCCTCGAATCAGCTGCTTCCAGTATCCGGCAACACCGCCGGTGTCTTTAGCAACGCCGGCTTCGAAAGCTCCGGGAGTGCTCTGTTACTGAACAGGGCTGAGGATATGAGTTTCCCTTGTTCCATGGGTGGTGCACAGCCCACTCTGTATCAGAAGCGAGCTGCACTTCGCCAGAACTCCACTGGCAGCAGCGGCTGCGATATATTGGGCAACTTGGAGATTTCGGGGCCCAGTTACTCCGGCTTGGGTTTGGAGGAGAAAAGGAAGAGGAGACATAATGAGAGCGAAATGGAAGACGATATGTCTAGTTTGAATTTTTATGATTCTGATGGTCAAGCGGAGGAGGAGGAGGAGGAGGGGAATGTGAATAATGCCGCTGGTGGAGGCTATTCTAATGCCAATAGTAGTGTCACTGATGGAGATTTCAAGGGGAAGAAGACGGGTTTACCGGCCAAAAATCTCATGGCCGAAAGGCGCCGGAGGAAGAAGCTCAACGACAGGCTCTACATGCTTAGGTCTGTAGTACCCAAGATAAGCAAGATGGATAGAGCGTCCATACTTGGGGATGCAATTGACTATTTGAGAGAGCTTCTGGGAAGGATTGATGACCTCCATAAGGAGCTGGAATCAGATGCACCTGGCTCTTCGTTGCAACCTTCAACAAATTTTAACCCATTGACACCAAATTCACTCACCTATCCCGGCCGTATCAAGGAGGAGCTCCGTCCTAGCTCCTTGCCAACCCCTAAAAGCCAACAACCTGCTGCAAAGGTGGATGTTCAGATAAGGGAAGGACGAGCTCTTAACATCCGCATGTTATCTCCACGCAGACCAGGTCTGTTGCTCTCTACTATGAGAGCCTTGGACAACCTTGGGTTAGACATCCAGCAGGCTGTGATCAGCTGCTTTAATGGATTTGCTCTGGATGTGTTCCAAGCTGAGCAATCCAGGGAAAACCATTTCTTGCCTGAGCAAATTAGAGCGGTACTCTTGAAATCAGCTGGATTTGATGGTATGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0008150 GO:0009705 GO:0009987 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF679

Protein Analysis

501

Amino Acids

54.74

Weight (kDa)

5.08

Isoelectric Point (pI)

58.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH_SAC51	PF23173	315 - 358	3.5e-06	Transcription factor SAC51 bHLH domain
HLH	PF00010	316 - 358	3.8e-09	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	419 - 487	6.9e-10	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001834)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27370
fragaria_vesca	FvH4_6g05181 FvH4_6g05200 FvH4_6g05210
malus_domestica	MD04G1211300.v1.1 MD12G1225200.v1.1
prunus_persica	Prupe.6G331700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0453861 RchiOBHm_Chr3g0453871 RchiOBHm_Chr3g0453891 RchiOBHm_Chr3g0453901 RchiOBHm_Chr3g0453911
rosa_laevigata	RLG00000025494 RLG00000025495 RLG00000025497
rosa_multiflora	Rmu_sc0003556.1_g000017 Rmu_sc0003556.1_g000021 Rmu_sc0003556.1_g000024 Rmu_sc0003556.1_g000025
rosa_roxburghii	Rroxscaffold_6G00430650 Rroxscaffold_6G00430680 Rroxscaffold_6G00430690 Rroxscaffold_6G00430710 Rroxscaffold_6G00430720 Rroxscaffold_6G00430730
rosa_rugosa	Rorug02G0651400 Rorug02G0651600 Rorug02G0651700.1 Rorug02G0651800
rosa_samantha	Rh3AG054100 Rh3AG054300 Rh3AG054400 Rh3BG055500 Rh3BG055700 Rh3BG056000 Rh3CG054500 Rh3CG054800 Rh3CG055000 Rh3CG055100 Rh3CG055200 Rh3DG055700 Rh3DG056100 Rh3DG056200 Rh3DG056300 Rh3DG056500
rosa_wichuraiana	Rw3G004160 Rw3G004170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1252
AccB1I	GGYRCC	3 cut(s)	20, 473, 957
AccBSI	CCGCTC	1 cut(s)	1466
AciI	CCGC	8 cut(s)	18, 237, 519, 675, 821, 858, 1294, 1466
AcoI	YGGCCR	4 cut(s)	117, 933, 948, 1186
AcsI	RAATTY	5 cut(s)	274, 280, 796, 1147, 1168
AcuI	CTGAAG	1 cut(s)	374
AcyI	GRCGYC	2 cut(s)	21, 958
AfaI	GTAC	3 cut(s)	152, 1008, 1470
AfiI	CCNNNNNNNGG	5 cut(s)	115, 509, 1044, 1099, 1195
AgsI	TTSAA	9 cut(s)	127, 224, 279, 285, 355, 796, 910, 1143, 1477
AhdI	GACNNNNNGTC	1 cut(s)	784
AjnI	CCWGG	5 cut(s)	254, 441, 1120, 1315, 1430
AjuI	GAANNNNNNNTTGG	2 cut(s)	296, 328
Alw21I	GWGCWC	5 cut(s)	378, 565, 619, 1206, 1285
Alw26I	GTCTC	1 cut(s)	748
Alw44I	GTGCAC	1 cut(s)	615
AlwNI	CAGNNNCTG	1 cut(s)	678
AoxI	GGCC	5 cut(s)	117, 710, 933, 948, 1186
ApaI	GGGCCC	1 cut(s)	714
ApaLI	GTGCAC	1 cut(s)	615
ApoI	RAATTY	5 cut(s)	274, 280, 796, 1147, 1168
AspLEI	GCGC	2 cut(s)	23, 960
AspS9I	GGNCC	3 cut(s)	66, 710, 711
AsuC2I	CCSGG	2 cut(s)	556, 1185
AsuHPI	GGTGA	2 cut(s)	155, 1168
AsuII	TTCGAA	1 cut(s)	546
AvaII	GGWCC	1 cut(s)	66
BaeGI	GKGCMC	2 cut(s)	619, 714
BalI	TGGCCA	1 cut(s)	119
BanI	GGYRCC	3 cut(s)	20, 473, 957
BanII	GRGCYC	5 cut(s)	102, 378, 714, 1206, 1285
BbsI	GAAGAC	3 cut(s)	54, 783, 926
Bbv12I	GWGCWC	5 cut(s)	378, 565, 619, 1206, 1285
BbvCI	CCTCAGC	1 cut(s)	582
BccI	CCATC	4 cut(s)	806, 893, 1018, 1487
BceAI	ACGGC	2 cut(s)	8, 1173
BcgI	CGANNNNNNTGC	2 cut(s)	478, 512
BciT130I	CCWGG	5 cut(s)	256, 443, 1122, 1317, 1432
BciVI	GTATCC	1 cut(s)	517
BclI	TGATCA	1 cut(s)	1380
BcnI	CCSGG	2 cut(s)	556, 1185
BcoDI	GTCTC	1 cut(s)	748
BfaI	CTAG	2 cut(s)	789, 1212
BfmI	CTRYAG	1 cut(s)	1002
BfoI	RGCGCY	2 cut(s)	24, 961
BfuAI	ACCTGC	1 cut(s)	1252
BfuI	GTATCC	1 cut(s)	517
BlpI	GCTNAGC	1 cut(s)	1422
Bme1390I	CCNGG	7 cut(s)	256, 443, 556, 1122, 1185, 1317, 1432
Bme18I	GGWCC	1 cut(s)	66
BmeRI	GACNNNNNGTC	1 cut(s)	784
BmgT120I	GGNCC	3 cut(s)	66, 710, 711
BmiI	GGNNCC	5 cut(s)	22, 475, 711, 712, 959
BmrFI	CCNGG	7 cut(s)	256, 443, 556, 1122, 1185, 1317, 1432
BmrI	ACTGGG	1 cut(s)	708
BmsI	GCATC	2 cut(s)	1039, 1105
BmuI	ACTGGG	1 cut(s)	708
BpiI	GAAGAC	3 cut(s)	54, 783, 926
BplI	GAGNNNNNCTC	4 cut(s)	470, 502, 1455, 1487
Bpu10I	CCTNAGC	3 cut(s)	582, 995, 1452
Bpu1102I	GCTNAGC	1 cut(s)	1422
Bpu14I	TTCGAA	1 cut(s)	546
BpuMI	CCSGG	2 cut(s)	556, 1185
BsaHI	GRCGYC	2 cut(s)	21, 958
BsaJI	CCNNGG	7 cut(s)	114, 255, 441, 606, 1344, 1354, 1431
Bsc4I	CCNNNNNNNGG	5 cut(s)	115, 509, 1044, 1099, 1195
Bse118I	RCCGGY	3 cut(s)	521, 539, 931
Bse1I	ACTGG	4 cut(s)	152, 503, 670, 714
BseBI	CCWGG	5 cut(s)	256, 443, 1122, 1317, 1432
BseDI	CCNNGG	7 cut(s)	114, 255, 441, 606, 1344, 1354, 1431
BseGI	GGATG	6 cut(s)	36, 1054, 1264, 1290, 1365, 1414
BseLI	CCNNNNNNNGG	5 cut(s)	115, 509, 1044, 1099, 1195
BseMII	CTCAG	4 cut(s)	478, 573, 1413, 1443
BseNI	ACTGG	4 cut(s)	152, 503, 670, 714
BseRI	GAGGAG	8 cut(s)	752, 766, 839, 842, 845, 848, 851, 1214
BseSI	GKGCMC	2 cut(s)	619, 714
BseX3I	CGGCCG	1 cut(s)	1186
BseYI	CCCAGC	1 cut(s)	384
BsgI	GTGCAG	2 cut(s)	444, 630
Bsh1285I	CGRYCG	1 cut(s)	1189
BshFI	GGCC	5 cut(s)	119, 712, 935, 950, 1188
BshNI	GGYRCC	3 cut(s)	20, 473, 957
BsiEI	CGRYCG	1 cut(s)	1189
BsiHKAI	GWGCWC	5 cut(s)	378, 565, 619, 1206, 1285
BsiSI	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 932, 961, 1185
BslI	CCNNNNNNNGG	5 cut(s)	115, 509, 1044, 1099, 1195
BsmAI	GTCTC	1 cut(s)	748
BsnI	GGCC	5 cut(s)	119, 712, 935, 950, 1188
Bsp119I	TTCGAA	1 cut(s)	546
Bsp120I	GGGCCC	1 cut(s)	710
Bsp1286I	GDGCHC	7 cut(s)	102, 378, 565, 619, 714, 1206, 1285
Bsp143I	GATC	1 cut(s)	1380
Bsp1720I	GCTNAGC	1 cut(s)	1422
Bsp19I	CCATGG	1 cut(s)	606
BspACI	CCGC	8 cut(s)	18, 237, 519, 675, 821, 858, 1294, 1466
BspANI	GGCC	5 cut(s)	119, 712, 935, 950, 1188
BspCNI	CTCAG	4 cut(s)	477, 574, 1414, 1444
BspLI	GGNNCC	5 cut(s)	22, 475, 711, 712, 959
BspMI	ACCTGC	1 cut(s)	1252
BspQI	GCTCTTC	1 cut(s)	1132
BspT104I	TTCGAA	1 cut(s)	546
BspT107I	GGYRCC	3 cut(s)	20, 473, 957
BsrBI	CCGCTC	1 cut(s)	1466
BsrFI	RCCGGY	3 cut(s)	521, 539, 931
BsrI	ACTGG	4 cut(s)	152, 503, 670, 714
BssAI	RCCGGY	3 cut(s)	521, 539, 931
BssECI	CCNNGG	7 cut(s)	114, 255, 441, 606, 1344, 1354, 1431
BssMI	GATC	1 cut(s)	1380
BssNI	GRCGYC	2 cut(s)	21, 958
BssT1I	CCWWGG	4 cut(s)	114, 606, 1344, 1354
Bst2UI	CCWGG	5 cut(s)	256, 443, 1122, 1317, 1432
Bst6I	CTCTTC	3 cut(s)	214, 743, 1132
BstACI	GRCGYC	2 cut(s)	21, 958
BstAPI	GCANNNNNTGC	1 cut(s)	678
BstBI	TTCGAA	1 cut(s)	546
BstC8I	GCNNGC	4 cut(s)	121, 541, 642, 1374
BstDEI	CTNAG	5 cut(s)	464, 582, 995, 1422, 1452
BstDSI	CCRYGG	1 cut(s)	606
BstENI	CCTNNNNNAGG	1 cut(s)	1097
BstF5I	GGATG	6 cut(s)	36, 1054, 1264, 1290, 1365, 1414
BstH2I	RGCGCY	2 cut(s)	24, 961
BstHHI	GCGC	2 cut(s)	23, 960
BstKTI	GATC	1 cut(s)	1383
BstMAI	GTCTC	1 cut(s)	748
BstMBI	GATC	1 cut(s)	1380
BstMCI	CGRYCG	1 cut(s)	1189
BstMWI	GCNNNNNNNGC	7 cut(s)	394, 458, 540, 549, 675, 678, 991
BstNI	CCWGG	5 cut(s)	256, 443, 1122, 1317, 1432
BstNSI	RCATGY	2 cut(s)	994, 1300
BstSCI	CCNGG	7 cut(s)	254, 441, 554, 1120, 1183, 1315, 1430
BstSFI	CTRYAG	1 cut(s)	1002
BstSLI	GKGCMC	2 cut(s)	619, 714
BstV2I	GAAGAC	3 cut(s)	54, 783, 926
BstZI	CGGCCG	1 cut(s)	1186
BsuI	GTATCC	1 cut(s)	517
BsuRI	GGCC	5 cut(s)	119, 712, 935, 950, 1188
BtgI	CCRYGG	1 cut(s)	606
BtsCI	GGATG	6 cut(s)	36, 1054, 1264, 1290, 1365, 1414
BtsIMutI	CAGTG	2 cut(s)	663, 894
BveI	ACCTGC	1 cut(s)	1252
Cac8I	GCNNGC	4 cut(s)	121, 541, 642, 1374
CaiI	CAGNNNCTG	1 cut(s)	678
CfoI	GCGC	2 cut(s)	23, 960
Cfr10I	RCCGGY	3 cut(s)	521, 539, 931
Cfr13I	GGNCC	3 cut(s)	66, 710, 711
CseI	GACGC	2 cut(s)	59, 1023
CsiI	ACCWGGT	1 cut(s)	1315
Csp6I	GTAC	3 cut(s)	151, 1007, 1469
CviAII	CATG	7 cut(s)	10, 133, 154, 607, 946, 991, 1297
CviQI	GTAC	3 cut(s)	151, 1007, 1469
DdeI	CTNAG	5 cut(s)	464, 582, 995, 1422, 1452
DinI	GGCGCC	2 cut(s)	22, 959
DpnI	GATC	1 cut(s)	1382
DpnII	GATC	1 cut(s)	1380
DraI	TTTAAA	1 cut(s)	273
DriI	GACNNNNNGTC	1 cut(s)	784
EaeI	YGGCCR	4 cut(s)	117, 933, 948, 1186
EagI	CGGCCG	1 cut(s)	1186
Eam1104I	CTCTTC	3 cut(s)	214, 743, 1132
Eam1105I	GACNNNNNGTC	1 cut(s)	784
EarI	CTCTTC	3 cut(s)	214, 743, 1132
Ecl136II	GAGCTC	3 cut(s)	376, 1204, 1283
EclXI	CGGCCG	1 cut(s)	1186
Eco130I	CCWWGG	4 cut(s)	114, 606, 1344, 1354
Eco24I	GRGCYC	5 cut(s)	102, 378, 714, 1206, 1285
Eco47I	GGWCC	1 cut(s)	66
Eco52I	CGGCCG	1 cut(s)	1186
Eco53kI	GAGCTC	3 cut(s)	376, 1204, 1283
Eco57I	CTGAAG	1 cut(s)	374
EcoICRI	GAGCTC	3 cut(s)	376, 1204, 1283
EcoNI	CCTNNNNNAGG	1 cut(s)	1097
EcoO109I	RGGNCCY	1 cut(s)	710
EcoRII	CCWGG	5 cut(s)	254, 441, 1120, 1315, 1430
EcoT14I	CCWWGG	4 cut(s)	114, 606, 1344, 1354
EcoT38I	GRGCYC	5 cut(s)	102, 378, 714, 1206, 1285
EgeI	GGCGCC	2 cut(s)	22, 959
EheI	GGCGCC	2 cut(s)	22, 959
ErhI	CCWWGG	4 cut(s)	114, 606, 1344, 1354
FaeI	CATG	7 cut(s)	13, 136, 157, 610, 949, 994, 1300
FatI	CATG	7 cut(s)	9, 132, 153, 606, 945, 990, 1296
FbaI	TGATCA	1 cut(s)	1380
FokI	GGATG	6 cut(s)	43, 1061, 1271, 1277, 1352, 1421
FriOI	GRGCYC	5 cut(s)	102, 378, 714, 1206, 1285
FspBI	CTAG	2 cut(s)	789, 1212
GlaI	GCGC	2 cut(s)	22, 959
GsaI	CCCAGC	1 cut(s)	388
HaeII	RGCGCY	2 cut(s)	24, 961
HaeIII	GGCC	5 cut(s)	119, 712, 935, 950, 1188
HapII	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 932, 961, 1185
HgaI	GACGC	2 cut(s)	59, 1023
HhaI	GCGC	2 cut(s)	23, 960
Hin1I	GRCGYC	2 cut(s)	21, 958
Hin1II	CATG	7 cut(s)	13, 136, 157, 610, 949, 994, 1300
Hin6I	GCGC	2 cut(s)	21, 958
HinP1I	GCGC	2 cut(s)	21, 958
HindIII	AAGCTT	1 cut(s)	405
HinfI	GANTC	3 cut(s)	490, 806, 1109
HpaII	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 932, 961, 1185
HphI	GGTGA	2 cut(s)	155, 1168
Hpy166II	GTNNAC	2 cut(s)	617, 929
Hpy188I	TCNGA	4 cut(s)	636, 811, 1114, 1266
Hpy188III	TCNNGA	3 cut(s)	379, 1406, 1474
Hpy8I	GTNNAC	2 cut(s)	617, 929
Hpy99I	CGWCG	1 cut(s)	179
HpyAV	CCTTC	4 cut(s)	134, 1074, 1149, 1268
HpyCH4IV	ACGT	1 cut(s)	174
HpyCH4V	TGCA	7 cut(s)	461, 617, 647, 1052, 1118, 1135, 1250
HpyF10VI	GCNNNNNNNGC	7 cut(s)	394, 458, 540, 549, 675, 678, 991
HpyF3I	CTNAG	5 cut(s)	464, 582, 995, 1422, 1452
HpySE526I	ACGT	1 cut(s)	174
Hsp92I	GRCGYC	2 cut(s)	21, 958
Hsp92II	CATG	7 cut(s)	13, 136, 157, 610, 949, 994, 1300
HspAI	GCGC	2 cut(s)	21, 958
KasI	GGCGCC	2 cut(s)	20, 957
KroI	GCCGGC	1 cut(s)	539
KroNI	GCCGGC	1 cut(s)	541
Ksp22I	TGATCA	1 cut(s)	1380
Kzo9I	GATC	1 cut(s)	1380
LguI	GCTCTTC	1 cut(s)	1132
LmnI	GCTCC	5 cut(s)	557, 1102, 1201, 1209, 1220
LweI	GCATC	2 cut(s)	1039, 1105
MabI	ACCWGGT	1 cut(s)	1315
MaeI	CTAG	2 cut(s)	789, 1212
MaeII	ACGT	1 cut(s)	174
MaeIII	GTNAC	4 cut(s)	143, 567, 716, 892
MalI	GATC	1 cut(s)	1382
MbiI	CCGCTC	1 cut(s)	1466
MboI	GATC	1 cut(s)	1380
MboII	GAAGA	9 cut(s)	51, 59, 201, 760, 788, 928, 931, 979, 1119
MfeI	CAATTG	1 cut(s)	1053
MhlI	GDGCHC	7 cut(s)	102, 378, 565, 619, 714, 1206, 1285
MlsI	TGGCCA	1 cut(s)	119
MluCI	AATT	9 cut(s)	274, 280, 349, 355, 796, 1053, 1147, 1168, 1458
MluNI	TGGCCA	1 cut(s)	119
Mly113I	GGCGCC	2 cut(s)	21, 958
MmeI	TCCRAC	1 cut(s)	237
Mox20I	TGGCCA	1 cut(s)	119
MroNI	GCCGGC	1 cut(s)	539
MscI	TGGCCA	1 cut(s)	119
MseI	TTAA	6 cut(s)	198, 272, 429, 1152, 1287, 1392
MslI	CAYNNNNRTG	1 cut(s)	1295
Msp20I	TGGCCA	1 cut(s)	119
MspA1I	CMGCKG	6 cut(s)	18, 496, 675, 860, 1386, 1484
MspI	CCGG	9 cut(s)	471, 510, 522, 540, 555, 723, 932, 961, 1185
MspR9I	CCNGG	7 cut(s)	256, 443, 556, 1122, 1185, 1317, 1432
MunI	CAATTG	1 cut(s)	1053
MvaI	CCWGG	5 cut(s)	256, 443, 1122, 1317, 1432
MwoI	GCNNNNNNNGC	7 cut(s)	394, 458, 540, 549, 675, 678, 991
NaeI	GCCGGC	1 cut(s)	541
NarI	GGCGCC	2 cut(s)	21, 958
NciI	CCSGG	2 cut(s)	556, 1185
NcoI	CCATGG	1 cut(s)	606
NdeII	GATC	1 cut(s)	1380
NgoMIV	GCCGGC	1 cut(s)	539
NlaIII	CATG	7 cut(s)	13, 136, 157, 610, 949, 994, 1300
NlaIV	GGNNCC	5 cut(s)	22, 475, 711, 712, 959
NmuCI	GTSAC	2 cut(s)	143, 892
NspI	RCATGY	2 cut(s)	994, 1300
NspV	TTCGAA	1 cut(s)	546
PciSI	GCTCTTC	1 cut(s)	1132
PcsI	WCGNNNNNNNCGW	1 cut(s)	543
PdiI	GCCGGC	1 cut(s)	541
PfeI	GAWTC	3 cut(s)	490, 806, 1109
PflFI	GACNNNGTC	1 cut(s)	1317
PfoI	TCCNGGA	1 cut(s)	554
PluTI	GGCGCC	2 cut(s)	24, 961
Psp124BI	GAGCTC	3 cut(s)	378, 1206, 1285
Psp6I	CCWGG	5 cut(s)	254, 441, 1120, 1315, 1430
PspFI	CCCAGC	1 cut(s)	384
PspGI	CCWGG	5 cut(s)	254, 441, 1120, 1315, 1430
PspN4I	GGNNCC	5 cut(s)	22, 475, 711, 712, 959
PspOMI	GGGCCC	1 cut(s)	710
PspPI	GGNCC	3 cut(s)	66, 710, 711
PstNI	CAGNNNCTG	1 cut(s)	678
PsyI	GACNNNGTC	1 cut(s)	1317
PvuII	CAGCTG	3 cut(s)	496, 1386, 1484
RsaI	GTAC	3 cut(s)	152, 1008, 1470
RsaNI	GTAC	3 cut(s)	151, 1007, 1469
RseI	CAYNNNNRTG	1 cut(s)	1295
SacI	GAGCTC	3 cut(s)	378, 1206, 1285
SapI	GCTCTTC	1 cut(s)	1132
SaqAI	TTAA	6 cut(s)	198, 272, 429, 1152, 1287, 1392
Sau3AI	GATC	1 cut(s)	1380
Sau96I	GGNCC	3 cut(s)	66, 710, 711
ScrFI	CCNGG	7 cut(s)	256, 443, 556, 1122, 1185, 1317, 1432
SduI	GDGCHC	7 cut(s)	102, 378, 565, 619, 714, 1206, 1285
SexAI	ACCWGGT	1 cut(s)	1315
SfaNI	GCATC	2 cut(s)	1039, 1105
SfcI	CTRYAG	1 cut(s)	1002
SfoI	GGCGCC	2 cut(s)	22, 959
SfuI	TTCGAA	1 cut(s)	546
SgrAI	CRCCGGYG	1 cut(s)	521
SinI	GGWCC	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1295
Sse9I	AATT	9 cut(s)	274, 280, 349, 355, 796, 1053, 1147, 1168, 1458
SsiI	CCGC	8 cut(s)	18, 237, 519, 675, 821, 858, 1294, 1466
SspDI	GGCGCC	2 cut(s)	20, 957
SspMI	CTAG	2 cut(s)	789, 1212
SstI	GAGCTC	3 cut(s)	378, 1206, 1285
StyD4I	CCNGG	7 cut(s)	254, 441, 554, 1120, 1183, 1315, 1430
StyI	CCWWGG	4 cut(s)	114, 606, 1344, 1354
TaiI	ACGT	1 cut(s)	177
TaqI	TCGA	3 cut(s)	342, 488, 546
TasI	AATT	9 cut(s)	274, 280, 349, 355, 796, 1053, 1147, 1168, 1458
TauI	GCSGC	3 cut(s)	21, 678, 860
TfiI	GAWTC	3 cut(s)	490, 806, 1109
Tru1I	TTAA	6 cut(s)	198, 272, 429, 1152, 1287, 1392
Tru9I	TTAA	6 cut(s)	198, 272, 429, 1152, 1287, 1392
TscAI	CASTG	2 cut(s)	670, 901
TseFI	GTSAC	2 cut(s)	143, 892
Tsp45I	GTSAC	2 cut(s)	143, 892
TspDTI	ATGAA	5 cut(s)	47, 105, 170, 417, 428
TspGWI	ACGGA	2 cut(s)	240, 1196
TspRI	CASTG	2 cut(s)	670, 901
Tth111I	GACNNNGTC	1 cut(s)	1317
VneI	GTGCAC	1 cut(s)	615
VpaK11BI	GGWCC	1 cut(s)	66
XagI	CCTNNNNNAGG	1 cut(s)	1097
XapI	RAATTY	5 cut(s)	274, 280, 796, 1147, 1168
XceI	RCATGY	2 cut(s)	994, 1300
XcmI	CCANNNNNNNNNTGG	2 cut(s)	662, 943
XspI	CTAG	2 cut(s)	789, 1212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.