Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005159

Physical Location & Seq

Genomic Coordinates Forward (+)

20074328 .. 20075977

Gene Structure 1650 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0220100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGATGAATATTTTGTTGTTGTGCCTCTTGATTGGCGCAATCTCGGTTGTTCATGGTGAGGATCCTTACCTTTTCTTCACATGGAATGTAACCTATGGAACCATCTCTCCCCTAGGAGTCCCCCAGCAAGGCATTCTCATCAACGGCGAGTTTCCGGGACCTAACATTAACTCCACCACCAACAACAACATCGTCATCAATGTCTTCAACAACCTTGATGAACCATTGATGTTCACATGGAATGGAATCCAACAGAAGAAGAATTCATGGCAAGATGGAACACCAGGGACTATGTGCCCTATTCCTCCTGGTCAGAACTACACGTACCACTTCCAAGTGAAGGACCAGATTGGAAGCTATTTCTACTATCCCATCACCGCCATGCACAGAGCAGGTGGTGCCTTCGGTGGCCTCCGTATTAACAGTCGTCTCTTGATCCCAGTTCCATATGCTGATCCCGAGGATGACTACACCGTCCTCATCGGCGACTGGTACACCAAAAGCCACAGCAGTCTCAGGAAACAATTGGACATGGGTCGCTCCATGGGAAGGCCGGACGGTGTCCTCATTAATGGCAAGAACGCAAAGGGAGATGGCACTGATGAGCCCCTCTTCACCATGACGCCCGGAAAGACCTACAAGTTCAGAGTCTGCAATGTTGGCCTCAAGAACTCCCTCAACTTCAGGATCCAAGGCCACACAATGAAGCTTGTTGAGATGGAAGGCTCTCACGTCGTCCAGAACATATACGAGTCTCTTGATGTGCATCTCGGGCAATGCTTTTCGGCGCTTGTCACGGCTGACAAAGAACCTATGGACTACTATATGGTGGCTGACACCCGATTCACCAAGACTATGCTCACCGGTTTAGGCATTATCCGATACACCAACGGCAAGGGTCCTGCAAGCCCCGAACTCCCTTCGCCTCCTGTGGGATTGGCTTGGTCTCTCAACCAAGCCCGCTCCTTCAGATGGAACCTCACTGCCAGTGCTGCCAGGCCTAACCCTCAAGGCTCCTATCACTATGGTGCCATCAACATCACCCGCACCATCAAGCTCGTCAACTCTGCCAGCAAGGTTGATGGCAAGCTGCGCTATGCCATAAATGGAGTCTCCCACATTGATACTGAAACCCCACTCAAGTATGCCCAGTACTTTGGAGTTGCGGACAAGGTCTTCAAGTACGACATCATCAAGGACGAGCCCTCATCCGAAGCAGAAGACAAGATCACCTTAGCACCTAATGTTGTCAACCAAACCTACCGGGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCATTCAGTCATGGCATCTGGATGGATTTGCTTTCTTTCCCGCTGCCATTGAGTTTGGGAGGTGGGCACCAGAGAAGAGAAGGAACTACAACCTTCTTGACGCCATTAGCCGACACACCGTCCACGTGTATCCCGGCTCATGGGCCGCCATTATGTTGACATTCGACAACGCTGGAATGTGGAACTTGAGGTCAGCACAGCCAGAGAGGGCGTACCTAGGACAACAGCTCTACCTGAGTGTTGAAAATGTCGCACGCTCTCTCAGGGACGAGTACATGCTGCCAGACCAGACACCTCTTTGTGGCATCGTCAAGGGTCTCCCTCCACCCCCTCCATACAGCCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

549

Amino Acids

61.5

Weight (kDa)

6.9

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	29 - 143	1.7e-39	Multicopper oxidase
Cu-oxidase	PF00394	155 - 297	7.3e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	379 - 517	5.8e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005159)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62030 AT3G62030 AT3G62030
fragaria_vesca	FvH4_1g26090
malus_domestica	MD10G1124600.v1.1 MD17G1286000.v1.1
prunus_persica	Prupe.3G001000_v2.0.a1 Prupe.3G001000_v2.0.a1
pyrus_communis	pycom17g28180
rosa_chinensis	RchiOBHm_Chr2g0135271 RchiOBHm_Chr2g0163561 RchiOBHm_Chr3g0485561 RchiOBHm_Chr3g0491891 RchiOBHm_Chr7g0181211
rosa_multiflora	Rmu_sc0001272.1_g000012 Rmu_sc0004711.1_g000017 Rmu_sc0008124.1_g000023 Rmu_sc0011240.1_g000010
rosa_roxburghii	Rroxscaffold_6G00396620 Rroxscaffold_6G00396920
rosa_rugosa	Rorug03G0220100
rosa_samantha	Rh3BG085100 Rh3BG304200 Rh3CG085300 Rh3CG302500 Rh3DG299100 Rh4CG129700 Rh7DG041000
rosa_wichuraiana	Rw3G023950 Rw3G024060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	383
AasI	GACNNNNNNGTC	1 cut(s)	473
Acc36I	ACCTGC	1 cut(s)	383
AccB1I	GGYRCC	3 cut(s)	398, 1028, 1369
AccBSI	CCGCTC	1 cut(s)	963
AciI	CCGC	6 cut(s)	378, 961, 1045, 1166, 1344, 1449
AclWI	GGATC	6 cut(s)	56, 69, 430, 449, 682, 695
AcsI	RAATTY	1 cut(s)	262
AcuI	CTGAAG	2 cut(s)	667, 952
AcvI	CACGTG	1 cut(s)	1429
AcyI	GRCGYC	2 cut(s)	623, 1404
AfaI	GTAC	6 cut(s)	326, 494, 1154, 1184, 1517, 1577
AfiI	CCNNNNNNNGG	7 cut(s)	128, 340, 549, 932, 972, 1443, 1604
AflIII	ACRYGT	2 cut(s)	321, 1428
AgeI	ACCGGT	1 cut(s)	863
AgsI	TTSAA	3 cut(s)	208, 1180, 1547
AhdI	GACNNNNNGTC	1 cut(s)	1421
AjiI	CACGTC	1 cut(s)	733
AjnI	CCWGG	3 cut(s)	283, 307, 995
AleI	CACNNNNGTG	1 cut(s)	1026
AloI	GAACNNNNNNTCC	2 cut(s)	91, 123
AluBI	AGCT	5 cut(s)	357, 709, 1057, 1090, 1531
AluI	AGCT	5 cut(s)	357, 709, 1057, 1090, 1531
Alw26I	GTCTC	6 cut(s)	434, 518, 759, 951, 1117, 1625
AlwI	GGATC	6 cut(s)	56, 69, 430, 449, 682, 695
AlwNI	CAGNNNCTG	1 cut(s)	651
Ama87I	CYCGRG	2 cut(s)	458, 770
AoxI	GGCC	6 cut(s)	409, 551, 661, 694, 998, 1446
ApeKI	GCWGC	4 cut(s)	992, 1090, 1346, 1582
ApoI	RAATTY	1 cut(s)	262
AseI	ATTAAT	1 cut(s)	570
AsiGI	ACCGGT	1 cut(s)	863
AspA2I	CCTAGG	2 cut(s)	112, 1519
AspLEI	GCGC	3 cut(s)	38, 790, 1095
AspS9I	GGNCC	4 cut(s)	158, 343, 899, 1446
AsuC2I	CCSGG	4 cut(s)	156, 627, 1265, 1437
AsuHPI	GGTGA	7 cut(s)	68, 367, 607, 838, 853, 1033, 1222
AvaI	CYCGRG	2 cut(s)	458, 770
AvaII	GGWCC	3 cut(s)	158, 343, 899
AvrII	CCTAGG	2 cut(s)	112, 1519
BaeGI	GKGCMC	2 cut(s)	299, 1372
BamHI	GGATCC	2 cut(s)	61, 687
BanI	GGYRCC	3 cut(s)	398, 1028, 1369
BanII	GRGCYC	2 cut(s)	609, 1206
BauI	CACGAG	1 cut(s)	1295
BbrPI	CACGTG	1 cut(s)	1429
BbsI	GAAGAC	3 cut(s)	196, 1168, 1227
BbvI	GCAGC	4 cut(s)	979, 1077, 1333, 1569
BceAI	ACGGC	3 cut(s)	160, 813, 907
BciT130I	CCWGG	3 cut(s)	285, 309, 997
BciVI	GTATCC	1 cut(s)	1443
BcnI	CCSGG	4 cut(s)	156, 627, 1265, 1437
BcoDI	GTCTC	6 cut(s)	434, 518, 759, 951, 1117, 1625
BfaI	CTAG	2 cut(s)	113, 1520
BfoI	RGCGCY	1 cut(s)	791
BfuAI	ACCTGC	1 cut(s)	383
BfuI	GTATCC	1 cut(s)	1443
BisI	GCNGC	5 cut(s)	993, 1091, 1347, 1449, 1583
BlnI	CCTAGG	2 cut(s)	112, 1519
BlsI	GCNGC	5 cut(s)	994, 1092, 1348, 1450, 1584
BmcAI	AGTACT	1 cut(s)	1154
Bme1390I	CCNGG	7 cut(s)	156, 285, 309, 627, 997, 1265, 1437
Bme18I	GGWCC	3 cut(s)	158, 343, 899
BmeRI	GACNNNNNGTC	1 cut(s)	1421
BmeT110I	CYCGRG	2 cut(s)	458, 770
BmgBI	CACGTC	1 cut(s)	733
BmgT120I	GGNCC	4 cut(s)	158, 343, 899, 1446
BmrFI	CCNGG	7 cut(s)	156, 285, 309, 627, 997, 1265, 1437
BmrI	ACTGGG	2 cut(s)	434, 1144
BmsI	GCATC	3 cut(s)	775, 1327, 1617
BmuI	ACTGGG	2 cut(s)	434, 1144
BoxI	GACNNNNGTC	1 cut(s)	534
BpiI	GAAGAC	3 cut(s)	196, 1168, 1227
Bpu10I	CCTNAGC	1 cut(s)	1234
BpuEI	CTTGAG	4 cut(s)	650, 993, 1124, 1510
BpuMI	CCSGG	4 cut(s)	156, 627, 1265, 1437
BsaAI	YACGTR	2 cut(s)	324, 1429
BsaBI	GATNNNNATC	1 cut(s)	765
BsaHI	GRCGYC	2 cut(s)	623, 1404
BsaI	GGTCTC	2 cut(s)	951, 1625
BsaJI	CCNNGG	6 cut(s)	112, 284, 459, 543, 691, 1519
BsaWI	WCCGGW	1 cut(s)	863
BsaXI	ACNNNNNCTCC	4 cut(s)	91, 121, 155, 185
Bsc4I	CCNNNNNNNGG	7 cut(s)	128, 340, 549, 932, 972, 1443, 1604
Bse118I	RCCGGY	1 cut(s)	863
Bse1I	ACTGG	4 cut(s)	440, 494, 987, 1150
Bse3DI	GCAATG	2 cut(s)	661, 782
Bse8I	GATNNNNATC	1 cut(s)	765
BseBI	CCWGG	3 cut(s)	285, 309, 997
BseDI	CCNNGG	6 cut(s)	112, 284, 459, 543, 691, 1519
BseGI	GGATG	3 cut(s)	469, 1208, 1330
BseJI	GATNNNNATC	1 cut(s)	765
BseLI	CCNNNNNNNGG	7 cut(s)	128, 340, 549, 932, 972, 1443, 1604
BseMI	GCAATG	2 cut(s)	661, 782
BseMII	CTCAG	3 cut(s)	529, 1529, 1579
BseNI	ACTGG	4 cut(s)	440, 494, 987, 1150
BseSI	GKGCMC	2 cut(s)	299, 1372
BseXI	GCAGC	4 cut(s)	979, 1077, 1333, 1569
BseYI	CCCAGC	1 cut(s)	123
BshFI	GGCC	6 cut(s)	411, 553, 663, 696, 1000, 1448
BshNI	GGYRCC	3 cut(s)	398, 1028, 1369
BshTI	ACCGGT	1 cut(s)	863
BsiHKCI	CYCGRG	2 cut(s)	458, 770
BsiSI	CCGG	6 cut(s)	155, 554, 627, 864, 1264, 1437
BslFI	GGGAC	5 cut(s)	104, 171, 301, 1280, 1583
BslI	CCNNNNNNNGG	7 cut(s)	128, 340, 549, 932, 972, 1443, 1604
BsmAI	GTCTC	6 cut(s)	434, 518, 759, 951, 1117, 1625
BsmBI	CGTCTC	1 cut(s)	434
BsmFI	GGGAC	5 cut(s)	104, 171, 301, 1280, 1583
BsmI	GAATGC	2 cut(s)	132, 1305
BsnI	GGCC	6 cut(s)	411, 553, 663, 696, 1000, 1448
Bso31I	GGTCTC	2 cut(s)	951, 1625
BsoBI	CYCGRG	2 cut(s)	458, 770
Bsp1286I	GDGCHC	4 cut(s)	299, 609, 1206, 1372
Bsp143I	GATC	5 cut(s)	61, 435, 454, 687, 1227
Bsp19I	CCATGG	1 cut(s)	543
BspACI	CCGC	6 cut(s)	378, 961, 1045, 1166, 1344, 1449
BspANI	GGCC	6 cut(s)	411, 553, 663, 696, 1000, 1448
BspCNI	CTCAG	3 cut(s)	528, 1530, 1578
BspMI	ACCTGC	1 cut(s)	383
BspPI	GGATC	6 cut(s)	56, 69, 430, 449, 682, 695
BspQI	GCTCTTC	1 cut(s)	1295
BspT107I	GGYRCC	3 cut(s)	398, 1028, 1369
BspTNI	GGTCTC	2 cut(s)	951, 1625
BsrBI	CCGCTC	1 cut(s)	963
BsrDI	GCAATG	2 cut(s)	661, 782
BsrFI	RCCGGY	1 cut(s)	863
BsrI	ACTGG	4 cut(s)	440, 494, 987, 1150
BssAI	RCCGGY	1 cut(s)	863
BssECI	CCNNGG	6 cut(s)	112, 284, 459, 543, 691, 1519
BssMI	GATC	5 cut(s)	61, 435, 454, 687, 1227
BssNI	GRCGYC	2 cut(s)	623, 1404
BssSI	CACGAG	1 cut(s)	1295
BssT1I	CCWWGG	4 cut(s)	112, 543, 691, 1519
Bst2BI	CACGAG	1 cut(s)	1295
Bst2UI	CCWGG	3 cut(s)	285, 309, 997
Bst4CI	ACNGT	4 cut(s)	425, 475, 560, 1423
Bst6I	CTCTTC	3 cut(s)	617, 1295, 1373
BstACI	GRCGYC	2 cut(s)	623, 1404
BstAPI	GCANNNNNTGC	1 cut(s)	398
BstBAI	YACGTR	2 cut(s)	324, 1429
BstC8I	GCNNGC	5 cut(s)	907, 961, 1072, 1088, 1558
BstDEI	CTNAG	4 cut(s)	515, 1234, 1538, 1565
BstDSI	CCRYGG	1 cut(s)	543
BstF5I	GGATG	3 cut(s)	469, 1208, 1330
BstH2I	RGCGCY	1 cut(s)	791
BstHHI	GCGC	3 cut(s)	38, 790, 1095
BstKTI	GATC	5 cut(s)	64, 438, 457, 690, 1230
BstMAI	GTCTC	6 cut(s)	434, 518, 759, 951, 1117, 1625
BstMBI	GATC	5 cut(s)	61, 435, 454, 687, 1227
BstMWI	GCNNNNNNNGC	5 cut(s)	398, 660, 772, 992, 1092
BstNI	CCWGG	3 cut(s)	285, 309, 997
BstNSI	RCATGY	1 cut(s)	1582
BstPAI	GACNNNNGTC	1 cut(s)	534
BstSCI	CCNGG	7 cut(s)	154, 283, 307, 625, 995, 1263, 1435
BstSLI	GKGCMC	2 cut(s)	299, 1372
BstV1I	GCAGC	4 cut(s)	979, 1077, 1333, 1569
BstV2I	GAAGAC	3 cut(s)	196, 1168, 1227
BstX2I	RGATCY	2 cut(s)	61, 687
BstXI	CCANNNNNNTGG	1 cut(s)	1157
BstYI	RGATCY	2 cut(s)	61, 687
BsuI	GTATCC	1 cut(s)	1443
BsuRI	GGCC	6 cut(s)	411, 553, 663, 696, 1000, 1448
BtgI	CCRYGG	1 cut(s)	543
BtrI	CACGTC	1 cut(s)	733
BtsCI	GGATG	3 cut(s)	469, 1208, 1330
BtsI	GCAGTG	1 cut(s)	981
BtsIMutI	CAGTG	3 cut(s)	597, 981, 994
BveI	ACCTGC	1 cut(s)	383
Cac8I	GCNNGC	5 cut(s)	907, 961, 1072, 1088, 1558
CaiI	CAGNNNCTG	1 cut(s)	651
CfoI	GCGC	3 cut(s)	38, 790, 1095
Cfr10I	RCCGGY	1 cut(s)	863
Cfr13I	GGNCC	4 cut(s)	158, 343, 899, 1446
CseI	GACGC	2 cut(s)	631, 1412
Csp6I	GTAC	6 cut(s)	325, 493, 1153, 1183, 1516, 1576
CspAI	ACCGGT	1 cut(s)	863
CviQI	GTAC	6 cut(s)	325, 493, 1153, 1183, 1516, 1576
DdeI	CTNAG	4 cut(s)	515, 1234, 1538, 1565
DpnI	GATC	5 cut(s)	63, 437, 456, 689, 1229
DpnII	GATC	5 cut(s)	61, 435, 454, 687, 1227
DrdI	GACNNNNNNGTC	1 cut(s)	473
DriI	GACNNNNNGTC	1 cut(s)	1421
DseDI	GACNNNNNNGTC	1 cut(s)	473
Eam1104I	CTCTTC	3 cut(s)	617, 1295, 1373
Eam1105I	GACNNNNNGTC	1 cut(s)	1421
EarI	CTCTTC	3 cut(s)	617, 1295, 1373
Eco130I	CCWWGG	4 cut(s)	112, 543, 691, 1519
Eco147I	AGGCCT	1 cut(s)	1000
Eco24I	GRGCYC	2 cut(s)	609, 1206
Eco31I	GGTCTC	2 cut(s)	951, 1625
Eco47I	GGWCC	3 cut(s)	158, 343, 899
Eco57I	CTGAAG	2 cut(s)	667, 952
Eco72I	CACGTG	1 cut(s)	1429
Eco88I	CYCGRG	2 cut(s)	458, 770
EcoO109I	RGGNCCY	2 cut(s)	158, 899
EcoRI	GAATTC	1 cut(s)	262
EcoRII	CCWGG	3 cut(s)	283, 307, 995
EcoT14I	CCWWGG	4 cut(s)	112, 543, 691, 1519
EcoT38I	GRGCYC	2 cut(s)	609, 1206
ErhI	CCWWGG	4 cut(s)	112, 543, 691, 1519
Esp3I	CGTCTC	1 cut(s)	434
FalI	AAGNNNNNCTT	2 cut(s)	1217, 1249
FaqI	GGGAC	5 cut(s)	104, 171, 301, 1280, 1583
FauI	CCCGC	3 cut(s)	968, 1052, 1351
FauNDI	CATATG	1 cut(s)	448
Fnu4HI	GCNGC	5 cut(s)	993, 1091, 1347, 1449, 1583
FokI	GGATG	3 cut(s)	476, 1195, 1337
FriOI	GRGCYC	2 cut(s)	609, 1206
Fsp4HI	GCNGC	5 cut(s)	993, 1091, 1347, 1449, 1583
FspBI	CTAG	2 cut(s)	113, 1520
GlaI	GCGC	3 cut(s)	37, 789, 1094
GluI	GCNGC	5 cut(s)	993, 1091, 1347, 1449, 1583
GsaI	CCCAGC	1 cut(s)	127
HaeII	RGCGCY	1 cut(s)	791
HaeIII	GGCC	6 cut(s)	411, 553, 663, 696, 1000, 1448
HapII	CCGG	6 cut(s)	155, 554, 627, 864, 1264, 1437
HgaI	GACGC	2 cut(s)	631, 1412
HhaI	GCGC	3 cut(s)	38, 790, 1095
Hin1I	GRCGYC	2 cut(s)	623, 1404
Hin6I	GCGC	3 cut(s)	36, 788, 1093
HinP1I	GCGC	3 cut(s)	36, 788, 1093
HincII	GTYRAC	3 cut(s)	1063, 1252, 1461
HindII	GTYRAC	3 cut(s)	1063, 1252, 1461
HindIII	AAGCTT	1 cut(s)	707
HinfI	GANTC	6 cut(s)	117, 246, 648, 752, 843, 1110
HpaII	CCGG	6 cut(s)	155, 554, 627, 864, 1264, 1437
HphI	GGTGA	7 cut(s)	68, 367, 607, 838, 853, 1033, 1222
Hpy166II	GTNNAC	6 cut(s)	234, 495, 1063, 1252, 1426, 1461
Hpy188I	TCNGA	5 cut(s)	315, 647, 881, 971, 1213
Hpy8I	GTNNAC	6 cut(s)	234, 495, 1063, 1252, 1426, 1461
Hpy99I	CGWCG	1 cut(s)	737
HpyAV	CCTTC	8 cut(s)	334, 412, 543, 716, 930, 976, 1377, 1406
HpyCH4III	ACNGT	4 cut(s)	425, 475, 560, 1423
HpyCH4IV	ACGT	3 cut(s)	323, 732, 1428
HpyCH4V	TGCA	4 cut(s)	385, 654, 766, 905
HpyF10VI	GCNNNNNNNGC	5 cut(s)	398, 660, 772, 992, 1092
HpyF3I	CTNAG	4 cut(s)	515, 1234, 1538, 1565
HpySE526I	ACGT	3 cut(s)	323, 732, 1428
Hsp92I	GRCGYC	2 cut(s)	623, 1404
HspAI	GCGC	3 cut(s)	36, 788, 1093
Kzo9I	GATC	5 cut(s)	61, 435, 454, 687, 1227
LguI	GCTCTTC	1 cut(s)	1295
LmnI	GCTCC	3 cut(s)	545, 968, 1019
Lsp1109I	GCAGC	4 cut(s)	979, 1077, 1333, 1569
LweI	GCATC	3 cut(s)	775, 1327, 1617
MaeI	CTAG	2 cut(s)	113, 1520
MaeII	ACGT	3 cut(s)	323, 732, 1428
MaeIII	GTNAC	2 cut(s)	88, 793
MalI	GATC	5 cut(s)	63, 437, 456, 689, 1229
MbiI	CCGCTC	1 cut(s)	963
MboI	GATC	5 cut(s)	61, 435, 454, 687, 1227
MboII	GAAGA	9 cut(s)	67, 196, 268, 271, 604, 1168, 1232, 1312, 1390
MfeI	CAATTG	1 cut(s)	524
MflI	RGATCY	2 cut(s)	61, 687
MhlI	GDGCHC	4 cut(s)	299, 609, 1206, 1372
MluCI	AATT	2 cut(s)	262, 524
MlyI	GAGTC	4 cut(s)	126, 657, 761, 1119
MmeI	TCCRAC	1 cut(s)	274
MseI	TTAA	4 cut(s)	168, 420, 570, 1648
MslI	CAYNNNNRTG	3 cut(s)	380, 1026, 1323
MspA1I	CMGCKG	1 cut(s)	1346
MspI	CCGG	6 cut(s)	155, 554, 627, 864, 1264, 1437
MspR9I	CCNGG	7 cut(s)	156, 285, 309, 627, 997, 1265, 1437
MunI	CAATTG	1 cut(s)	524
Mva1269I	GAATGC	2 cut(s)	132, 1305
MvaI	CCWGG	3 cut(s)	285, 309, 997
MwoI	GCNNNNNNNGC	5 cut(s)	398, 660, 772, 992, 1092
NciI	CCSGG	4 cut(s)	156, 627, 1265, 1437
NcoI	CCATGG	1 cut(s)	543
NdeI	CATATG	1 cut(s)	448
NdeII	GATC	5 cut(s)	61, 435, 454, 687, 1227
NmuCI	GTSAC	1 cut(s)	793
NspI	RCATGY	1 cut(s)	1582
OliI	CACNNNNGTG	1 cut(s)	1026
PaqCI	CACCTGC	1 cut(s)	383
PceI	AGGCCT	1 cut(s)	1000
PciSI	GCTCTTC	1 cut(s)	1295
PctI	GAATGC	2 cut(s)	132, 1305
PfeI	GAWTC	2 cut(s)	246, 843
PflFI	GACNNNGTC	2 cut(s)	560, 1172
PfoI	TCCNGGA	1 cut(s)	154
PinAI	ACCGGT	1 cut(s)	863
PkrI	GCNGC	5 cut(s)	994, 1092, 1348, 1450, 1584
PleI	GAGTC	4 cut(s)	125, 656, 760, 1118
PmaCI	CACGTG	1 cut(s)	1429
PmlI	CACGTG	1 cut(s)	1429
PpsI	GAGTC	4 cut(s)	125, 656, 760, 1118
Ppu21I	YACGTR	2 cut(s)	324, 1429
PpuMI	RGGWCCY	2 cut(s)	158, 899
PshAI	GACNNNNGTC	1 cut(s)	534
PshBI	ATTAAT	1 cut(s)	570
Psp5II	RGGWCCY	2 cut(s)	158, 899
Psp6I	CCWGG	3 cut(s)	283, 307, 995
PspCI	CACGTG	1 cut(s)	1429
PspFI	CCCAGC	1 cut(s)	123
PspGI	CCWGG	3 cut(s)	283, 307, 995
PspPI	GGNCC	4 cut(s)	158, 343, 899, 1446
PspPPI	RGGWCCY	2 cut(s)	158, 899
PsrI	GAACNNNNNNTAC	2 cut(s)	308, 340
PstNI	CAGNNNCTG	1 cut(s)	651
PsuI	RGATCY	2 cut(s)	61, 687
PsyI	GACNNNGTC	2 cut(s)	560, 1172
RsaI	GTAC	6 cut(s)	326, 494, 1154, 1184, 1517, 1577
RsaNI	GTAC	6 cut(s)	325, 493, 1153, 1183, 1516, 1576
RseI	CAYNNNNRTG	3 cut(s)	380, 1026, 1323
SapI	GCTCTTC	1 cut(s)	1295
SaqAI	TTAA	4 cut(s)	168, 420, 570, 1648
SatI	GCNGC	5 cut(s)	993, 1091, 1347, 1449, 1583
Sau3AI	GATC	5 cut(s)	61, 435, 454, 687, 1227
Sau96I	GGNCC	4 cut(s)	158, 343, 899, 1446
ScaI	AGTACT	1 cut(s)	1154
SchI	GAGTC	4 cut(s)	126, 657, 761, 1119
ScrFI	CCNGG	7 cut(s)	156, 285, 309, 627, 997, 1265, 1437
SduI	GDGCHC	4 cut(s)	299, 609, 1206, 1372
SfaNI	GCATC	3 cut(s)	775, 1327, 1617
SinI	GGWCC	3 cut(s)	158, 343, 899
SmiMI	CAYNNNNRTG	3 cut(s)	380, 1026, 1323
SmlI	CTYRAG	4 cut(s)	665, 1008, 1139, 1489
SmoI	CTYRAG	4 cut(s)	665, 1008, 1139, 1489
Sse9I	AATT	2 cut(s)	262, 524
SseBI	AGGCCT	1 cut(s)	1000
SsiI	CCGC	6 cut(s)	378, 961, 1045, 1166, 1344, 1449
SspI	AATATT	1 cut(s)	10
SspMI	CTAG	2 cut(s)	113, 1520
StuI	AGGCCT	1 cut(s)	1000
StyD4I	CCNGG	7 cut(s)	154, 283, 307, 625, 995, 1263, 1435
StyI	CCWWGG	4 cut(s)	112, 543, 691, 1519
TaaI	ACNGT	4 cut(s)	425, 475, 560, 1423
TaiI	ACGT	3 cut(s)	326, 735, 1431
TaqI	TCGA	1 cut(s)	1467
TasI	AATT	2 cut(s)	262, 524
TatI	WGTACW	2 cut(s)	1152, 1575
TauI	GCSGC	1 cut(s)	1451
TfiI	GAWTC	2 cut(s)	246, 843
Tru1I	TTAA	4 cut(s)	168, 420, 570, 1648
Tru9I	TTAA	4 cut(s)	168, 420, 570, 1648
TscAI	CASTG	3 cut(s)	604, 988, 994
TseFI	GTSAC	1 cut(s)	793
TseI	GCWGC	4 cut(s)	992, 1090, 1346, 1582
Tsp45I	GTSAC	1 cut(s)	793
TspDTI	ATGAA	5 cut(s)	20, 41, 234, 255, 719
TspGWI	ACGGA	1 cut(s)	404
TspRI	CASTG	3 cut(s)	604, 988, 994
Tth111I	GACNNNGTC	2 cut(s)	560, 1172
VpaK11BI	GGWCC	3 cut(s)	158, 343, 899
VspI	ATTAAT	1 cut(s)	570
XapI	RAATTY	1 cut(s)	262
XceI	RCATGY	1 cut(s)	1582
XmaJI	CCTAGG	2 cut(s)	112, 1519
XspI	CTAG	2 cut(s)	113, 1520
ZrmI	AGTACT	1 cut(s)	1154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.