Rorug05G0357600

Histone H3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000501
Physical Location & Seq
Reverse (-)
45303120 .. 45312339
9220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0357600.1

Sequence Viewer

Length: 2700 bp
ATGGTGATGGCTGAAACTGATGAGCTCAATGTGAATGGTCCCAAATCCCCGTGGAAGACTCCGGTCGCCGCCGAAGAAGCTCCCGTCAATGGCATGGGTGCCGAGTCCTGGCCTGCTCTGGCTGACGCCCAGGCCCAGGCCCAGGCCCATAGGTCCAAGACTCCCGACCTTGCCACTCCTCTGCCTCCTCAGGGATTAATCTCGCAGCAAAAGACGAATCGGCCTGGAAACTCTAACGCTTCGCATAAGCATTCATCGTCACAATATCAAAAGACAGGCCCTAAACGCAATCCAAATGTTGCACCTCCTTTCCCAGTACCCTTACCTTACCATCAACCATCACTTCCACCTGTTTTTCATACTATGGTACATCCGCCACACATTGCTGCTTCTGGTTATGCTTTCCAGCCATACCCTGGACCCATTGCAAATGTTGAAAATCATATAGCAAAATCTGGATCTGAGACCCCGGTGCAAGGTTTTGTGCAACCGGTTCAGCCCCAACCACGAGGTAATCCAAATGCTTATGGTGTCAATTTTTCTTCTAGAAGACCCAATATGCAAGAGCCTGGTGGGCCTGGTGGCCATTGGAATCATGCTTGGTATCAGCAACGACCATTTAATCCCAGAGAGAACATTCCTATGCAACAGGGGGTTGGACCTAGGCCTTTCTTGAGGCCTCCATTTTTTGGTCCAGCTCCAGGGTTCATGGTTGGCCCAACTATTCCAGGACCTGTCCCCATGTGCTATGTTCCAGTTCCGCCGACTGGTGCAATTAGGGGACCTCATCCTCCCCACTTTATGCCACATCCTTTAAATCCAGGGGCTCCATTACTACACCCGGAGACACATCCGGTAGCTTTGAGGGATAATATTATAAAACAAATAGAGTATTATTTTAGTGATGAAAATCTAAAGAATGACAAGTACCTAATTTCATTGATGGATGACCAAGGGTGGGTGCCAGTAACCTCTATTGCTGACTTTAAAAGGGTTAAGAAAATGTGTACAGACATAGCATTTATTCTTGATTCACTGCTGGGTTCAGCTACCGTTGAAGTGCAGGGCAACAAGATACGGAGACGAATTGAGTGGTCAAAGTGGATTGCAACTTCTACAGACTCTACATCAAAACCGGCCCAACTTGAACAGAGGTCTATCAATGTTTTAGAGAATAGTGATGCCAGTGGTGATGGAAGGACCACTTGCGAGGAGAATGTTGAACTTTCATCATGTGAAAAGAATTTGATGGAGGACAAGCCATCAAATACCGAACATGGCCTTGATACTCTTGACATTGATGGTAGATTACCAGAGTTGACTTGTAATAATGGTGATAAGATTCGAAAGTCTACTGCCAAATCAAATTTTAAGTCCTCATATCTTAAAACGAATCATTGCTCAGACTGCCCTGACCAATCCAAGGGAACTGAGCCTTCAGATATGGATATGAAGAATCTTGGTGGTCTGTCAAGTGATTTTGCAAACACATTTATGCTCGACGAAGAGCTAGAGCTTGAGCAGAAAATAATAAAAAAGGATGATCTCTATCCCAGTAGAAGGGTTGATGATGAAGATGATGAGATTGTCGTACATGATCAGGATGTCCAGAGACTTGTAATTGTTACCAGGAATTGCAGAGTAGGTGAAGGATCTAAAACTGATGATAAGGAATCAAAAACCATTACCAATGAGCTCGCTTCTGCTATAAATGAAGGCCTTTATTTCTATGAGCAGGAACTGAAAACCAAGCGATCAAACCGTAAAAAGAACAACTCCAGTTACGAAAATAGAGATGCAGGCTCAAGAGTTTCAAATTTGGCCAAAGGATTTTCAAATTTGAAACGTGCTGAAATATCTGGCAGTAACAGTGGCACTGAAGAGTCTATAAGTGCTAATTCCCGAAAGAAGCATAGCAAAAACTTCCAAAATCAACAGTCATCCCATAGACAGCGATTCTTCTCGAGCAACTTTAGAAATTATGGAACCGGTCGGAACTCTCTAGGAATCATATCTGAAAGTCCACCAAGTAACTCAGTTGGATTTTTCTTTAGTTCCACACCACCTGAAAATCATGGTCCAAGATCTTCCAAGTTGAGTATTTCTCCCCATGGGGTTCTGTCAGGGAGCAGTCCGCCAGTGGGTTCTGTGCCAAAGTCATTTCCACCATTTCAGCATCCAAGTCATCAGCTTCTAGAAGAAAATGGTTTTAAACAGCAGAAGTACCTAAAGTATCACAAGCGGTGCCTAAATGACAGGAAGAAGTTGGGAATCGGTTGCAGTGAGGAAATGAATACTTTATATAGATTTTGGTCGTATTTCCTAAGAAACATGTTCAACTGCTCAATGTATGATGAGTTCCGGAAATATGCACTTGAAGACGCTGCTGCTAGCTATCATTATGGACTAGAGTGCCTATTCAGATTCTATAGTTATGGGTTGGAGAAGGAATTTAGAGATGACCTGTATGATGACTTTGAACAGCTGACTCTGGAGTTTTACCATAAAGGAAATCTGTATGGCCTGGAAAAATATTGGGCATTTCATCATTATCGGGAAAAACGGGGTCAGAAGGAGCCTCTTAGAAAAAATCAAGAATTGGATCGATTGCTTAGGGAAGTATACCGTAGCTTGGATGATTTCCGTGCCAAAGAGAGGACTACAACGGCAATCACTACCATGAAAGAGAGGAGTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05034 ko05202 ko05322 map05034 map05202 map05322
Pfam Domains
Protein Families
Histone

Protein Analysis

899

Amino Acids

101.39

Weight (kDa)

8.23

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
La PF05383 292 - 346 2.6e-22 La domain
LARP1_HEAT PF21071 726 - 873 1.5e-61 LARP1 HEAT repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000501)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G09200 AT3G27360 AT5G10390 AT5G10400 AT5G65360
fragaria_vesca FvH4_3g08401 FvH4_3g35371 FvH4_3g39201 FvH4_3g43404 FvH4_5g38881 FvH4_6g43231 FvH4_6g43231
malus_domestica MD00G1200300.v1.1 MD03G1020400.v1.1 MD03G1023100.v1.1 MD05G1308500.v1.1 MD10G1287500.v1.1 MD11G1026900.v1.1
prunus_persica Prupe.4G054300_v2.0.a1 Prupe.6G016200_v2.0.a1 Prupe.6G021100_v2.0.a1 Prupe.6G021700_v2.0.a1
pyrus_communis pycom10g24050 pycom11g01750
rosa_chinensis RchiOBHm_Chr2g0159531 RchiOBHm_Chr5g0009481 RchiOBHm_Chr5g0063481 RchiOBHm_Chr5g0070661 RchiOBHm_Chr5g0077691 RchiOBHm_Chr5g0077731 RchiOBHm_Chr5g0077781 RchiOBHm_Chr5g0077851
rosa_laevigata RLG00000021163 RLG00000031665 RLG00000035639 RLG00000036148 RLG00000036709
rosa_multiflora Rmu_sc0002711.1_g000014 Rmu_sc0002944.1_g000060 Rmu_sc0004168.1_g000003 Rmu_sc0004168.1_g000010 Rmu_sc0004277.1_g000010 Rmu_sc0004277.1_g000017 Rmu_sc0004277.1_g000019 Rmu_sc0005197.1_g000016 Rmu_sc0007856.1_g000002 Rmu_sc0012414.1_g000011 Rmu_sc0016394.1_g000002 Rmu_ssc0000309.1_g000059
rosa_roxburghii Rroxscaffold_1G00004350 Rroxscaffold_1G00010570 Rroxscaffold_1G00017230 Rroxscaffold_2G00090420
rosa_rugosa Rorug02G0476400 Rorug04G0443400 Rorug05G0357600 Rorug05G0407400 Rorug05G0456200 Rorug05G0456600
rosa_samantha Rh2BG556100 Rh2BG556600 Rh2CG526800 Rh2DG565600 Rh5AG510400 Rh5AG510600 Rh5AG510800 Rh5BG070300 Rh5BG431900 Rh5BG481100 Rh5BG532700 Rh5BG532900 Rh5BG533400 Rh5BG533500 Rh5CG082700 Rh5CG455200 Rh5CG505300 Rh5CG556400 Rh5CG556600 Rh5CG556900 Rh5CG557000
rosa_wichuraiana Rw2G044950 Rw5G006900 Rw5G039150 Rw5G043100 Rw5G047360 Rw5G047380 Rw5G047410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 878
AccB1I GGYRCC 3 cut(s) 98, 961, 2244
AccB7I CCANNNNNTGG 2 cut(s) 416, 689
AccI GTMKAC 2 cut(s) 1352, 2622
AccIII TCCGGA 1 cut(s) 2361
AciI CCGC 5 cut(s) 69, 374, 761, 2135, 2242
AclWI GGATC 3 cut(s) 466, 1660, 2610
AcoI YGGCCR 2 cut(s) 583, 1821
AcsI RAATTY 5 cut(s) 1243, 1366, 1816, 1837, 2450
AcuI CTGAAG 2 cut(s) 1422, 1899
AcyI GRCGYC 1 cut(s) 126
AfaI GTAC 6 cut(s) 318, 369, 929, 1009, 1593, 2225
AflIII ACRYGT 1 cut(s) 2331
AgeI ACCGGT 2 cut(s) 490, 1988
Alw21I GWGCWC 2 cut(s) 27, 1698
Alw26I GTCTC 4 cut(s) 458, 839, 1075, 1606
AlwI GGATC 3 cut(s) 466, 1660, 2610
AlwNI CAGNNNCTG 2 cut(s) 734, 1741
Ama87I CYCGRG 1 cut(s) 1963
Aor13HI TCCGGA 1 cut(s) 2361
ApeKI GCWGC 4 cut(s) 205, 386, 2384, 2387
ApoI RAATTY 5 cut(s) 1243, 1366, 1816, 1837, 2450
ArsI GACNNNNNNTTYG 2 cut(s) 1358, 1390
AseI ATTAAT 1 cut(s) 197
AsiGI ACCGGT 2 cut(s) 490, 1988
AspA2I CCTAGG 1 cut(s) 662
AsuC2I CCSGG 2 cut(s) 470, 842
AsuHPI GGTGA 4 cut(s) 16, 1202, 1346, 1658
AsuII TTCGAA 1 cut(s) 1345
AsuNHI GCTAGC 1 cut(s) 2390
AvaI CYCGRG 1 cut(s) 1963
AvaII GGWCC 9 cut(s) 38, 153, 419, 659, 692, 731, 782, 1200, 2078
AvrII CCTAGG 1 cut(s) 662
AxyI CCTNAGG 1 cut(s) 189
BalI TGGCCA 2 cut(s) 585, 1823
BanI GGYRCC 3 cut(s) 98, 961, 2244
BanII GRGCYC 3 cut(s) 27, 829, 1698
BauI CACGAG 1 cut(s) 507
BbsI GAAGAC 3 cut(s) 62, 556, 2385
Bbv12I GWGCWC 2 cut(s) 27, 1698
BbvI GCAGC 4 cut(s) 217, 373, 2371, 2374
BccI CCATC 7 cut(s) 339, 346, 937, 1187, 1243, 1270, 1295
BceAI ACGGC 1 cut(s) 2682
BclI TGATCA 1 cut(s) 1597
BcnI CCSGG 2 cut(s) 470, 842
BcoDI GTCTC 4 cut(s) 458, 839, 1075, 1606
BfaI CTAG 7 cut(s) 546, 663, 1511, 2003, 2195, 2391, 2408
BfmI CTRYAG 2 cut(s) 1116, 2428
BglI GCCNNNNNGGC 1 cut(s) 574
BglII AGATCT 1 cut(s) 2084
BisI GCNGC 5 cut(s) 69, 206, 387, 2385, 2388
BlnI CCTAGG 1 cut(s) 662
BlsI GCNGC 5 cut(s) 70, 207, 388, 2386, 2389
Bme18I GGWCC 9 cut(s) 38, 153, 419, 659, 692, 731, 782, 1200, 2078
BmeT110I CYCGRG 1 cut(s) 1963
BmiI GGNNCC 9 cut(s) 40, 100, 421, 783, 828, 963, 1987, 2246, 2577
BmrI ACTGGG 2 cut(s) 308, 1548
BmsI GCATC 3 cut(s) 1171, 1786, 2185
BmtI GCTAGC 1 cut(s) 2394
BmuI ACTGGG 2 cut(s) 308, 1548
BoxI GACNNNNGTC 1 cut(s) 62
BpiI GAAGAC 3 cut(s) 62, 556, 2385
BplI GAGNNNNNCTC 2 cut(s) 2089, 2121
BpmI CTGGAG 3 cut(s) 684, 1762, 2513
Bpu10I CCTNAGC 1 cut(s) 2612
Bpu14I TTCGAA 1 cut(s) 1345
BpuEI CTTGAG 3 cut(s) 694, 1538, 1789
BpuMI CCSGG 2 cut(s) 470, 842
Bsa29I ATCGAT 1 cut(s) 2605
BsaBI GATNNNNATC 2 cut(s) 909, 1548
BsaHI GRCGYC 1 cut(s) 126
BsaI GGTCTC 1 cut(s) 458
BsaWI WCCGGW 5 cut(s) 61, 490, 853, 1988, 2361
Bse118I RCCGGY 3 cut(s) 490, 1135, 1988
Bse1I ACTGG 8 cut(s) 314, 755, 772, 965, 1185, 1554, 1779, 2138
Bse21I CCTNAGG 1 cut(s) 189
Bse3DI GCAATG 3 cut(s) 381, 423, 1396
Bse8I GATNNNNATC 2 cut(s) 909, 1548
BseAI TCCGGA 1 cut(s) 2361
BseCI ATCGAT 1 cut(s) 2605
BseJI GATNNNNATC 2 cut(s) 909, 1548
BseMI GCAATG 3 cut(s) 381, 423, 1396
BseMII CTCAG 5 cut(s) 203, 453, 1416, 1422, 2049
BseNI ACTGG 8 cut(s) 314, 755, 772, 965, 1185, 1554, 1779, 2138
BseRI GAGGAG 3 cut(s) 168, 177, 1226
BseXI GCAGC 4 cut(s) 217, 373, 2371, 2374
BseYI CCCAGC 1 cut(s) 1039
BsgI GTGCAG 1 cut(s) 1082
Bsh1285I CGRYCG 2 cut(s) 66, 1993
BshNI GGYRCC 3 cut(s) 98, 961, 2244
BshTI ACCGGT 2 cut(s) 490, 1988
BshVI ATCGAT 1 cut(s) 2605
BsiEI CGRYCG 2 cut(s) 66, 1993
BsiHKAI GWGCWC 2 cut(s) 27, 1698
BsiHKCI CYCGRG 1 cut(s) 1963
BsiSI CCGG 8 cut(s) 62, 470, 491, 842, 854, 1136, 1989, 2362
BslFI GGGAC 3 cut(s) 24, 722, 795
BsmAI GTCTC 4 cut(s) 458, 839, 1075, 1606
BsmBI CGTCTC 1 cut(s) 1075
BsmFI GGGAC 3 cut(s) 24, 722, 795
BsmI GAATGC 1 cut(s) 250
Bso31I GGTCTC 1 cut(s) 458
BsoBI CYCGRG 1 cut(s) 1963
Bsp119I TTCGAA 1 cut(s) 1345
Bsp1286I GDGCHC 3 cut(s) 27, 829, 1698
Bsp13I TCCGGA 1 cut(s) 2361
Bsp1407I TGTACA 1 cut(s) 1007
Bsp143I GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
Bsp19I CCATGG 1 cut(s) 2110
BspACI CCGC 5 cut(s) 69, 374, 761, 2135, 2242
BspCNI CTCAG 5 cut(s) 202, 454, 1415, 1423, 2048
BspDI ATCGAT 1 cut(s) 2605
BspEI TCCGGA 1 cut(s) 2361
BspLI GGNNCC 9 cut(s) 40, 100, 421, 783, 828, 963, 1987, 2246, 2577
BspOI GCTAGC 1 cut(s) 2394
BspPI GGATC 3 cut(s) 466, 1660, 2610
BspQI GCTCTTC 1 cut(s) 1500
BspT104I TTCGAA 1 cut(s) 1345
BspT107I GGYRCC 3 cut(s) 98, 961, 2244
BspTNI GGTCTC 1 cut(s) 458
BsrDI GCAATG 3 cut(s) 381, 423, 1396
BsrFI RCCGGY 3 cut(s) 490, 1135, 1988
BsrGI TGTACA 1 cut(s) 1007
BsrI ACTGG 8 cut(s) 314, 755, 772, 965, 1185, 1554, 1779, 2138
BssAI RCCGGY 3 cut(s) 490, 1135, 1988
BssMI GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
BssNAI GTATAC 1 cut(s) 2623
BssNI GRCGYC 1 cut(s) 126
BssSI CACGAG 1 cut(s) 507
BssT1I CCWWGG 4 cut(s) 662, 952, 1422, 2110
Bst1107I GTATAC 1 cut(s) 2623
Bst2BI CACGAG 1 cut(s) 507
Bst4CI ACNGT 5 cut(s) 1054, 1763, 1871, 1938, 2627
Bst6I CTCTTC 2 cut(s) 1500, 1875
BstACI GRCGYC 1 cut(s) 126
BstAUI TGTACA 1 cut(s) 1007
BstBI TTCGAA 1 cut(s) 1345
BstC8I GCNNGC 4 cut(s) 114, 1698, 1801, 2392
BstDEI CTNAG 8 cut(s) 189, 462, 1402, 1431, 2035, 2324, 2582, 2612
BstDSI CCRYGG 2 cut(s) 50, 2110
BstKTI GATC 7 cut(s) 461, 1546, 1600, 1655, 1757, 2087, 2605
BstMAI GTCTC 4 cut(s) 458, 839, 1075, 1606
BstMBI GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
BstMCI CGRYCG 2 cut(s) 66, 1993
BstMWI GCNNNNNNNGC 4 cut(s) 77, 285, 574, 1407
BstNSI RCATGY 1 cut(s) 2335
BstPAI GACNNNNGTC 1 cut(s) 62
BstSFI CTRYAG 2 cut(s) 1116, 2428
BstV1I GCAGC 4 cut(s) 217, 373, 2371, 2374
BstV2I GAAGAC 3 cut(s) 62, 556, 2385
BstX2I RGATCY 3 cut(s) 458, 1652, 2084
BstYI RGATCY 3 cut(s) 458, 1652, 2084
BstZ17I GTATAC 1 cut(s) 2623
Bsu15I ATCGAT 1 cut(s) 2605
Bsu36I CCTNAGG 1 cut(s) 189
BsuTUI ATCGAT 1 cut(s) 2605
BtgI CCRYGG 2 cut(s) 50, 2110
BtsI GCAGTG 2 cut(s) 1034, 2287
BtsIMutI CAGTG 6 cut(s) 1034, 1192, 1875, 1876, 2145, 2287
Cac8I GCNNGC 4 cut(s) 114, 1698, 1801, 2392
CaiI CAGNNNCTG 2 cut(s) 734, 1741
Cfr10I RCCGGY 3 cut(s) 490, 1135, 1988
ClaI ATCGAT 1 cut(s) 2605
CseI GACGC 2 cut(s) 134, 2390
Csp6I GTAC 6 cut(s) 317, 368, 928, 1008, 1592, 2224
CspAI ACCGGT 2 cut(s) 490, 1988
CviQI GTAC 6 cut(s) 317, 368, 928, 1008, 1592, 2224
DdeI CTNAG 8 cut(s) 189, 462, 1402, 1431, 2035, 2324, 2582, 2612
DpnI GATC 7 cut(s) 460, 1545, 1599, 1654, 1756, 2086, 2604
DpnII GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
DraI TTTAAA 3 cut(s) 816, 988, 2212
EaeI YGGCCR 2 cut(s) 583, 1821
Eam1104I CTCTTC 2 cut(s) 1500, 1875
EarI CTCTTC 2 cut(s) 1500, 1875
EciI GGCGGA 3 cut(s) 363, 750, 2124
Ecl136II GAGCTC 2 cut(s) 25, 1696
Eco130I CCWWGG 4 cut(s) 662, 952, 1422, 2110
Eco147I AGGCCT 3 cut(s) 667, 679, 1719
Eco24I GRGCYC 3 cut(s) 27, 829, 1698
Eco31I GGTCTC 1 cut(s) 458
Eco47I GGWCC 9 cut(s) 38, 153, 419, 659, 692, 731, 782, 1200, 2078
Eco53kI GAGCTC 2 cut(s) 25, 1696
Eco57I CTGAAG 2 cut(s) 1422, 1899
Eco81I CCTNAGG 1 cut(s) 189
Eco88I CYCGRG 1 cut(s) 1963
EcoICRI GAGCTC 2 cut(s) 25, 1696
EcoO109I RGGNCCY 3 cut(s) 278, 731, 782
EcoT14I CCWWGG 4 cut(s) 662, 952, 1422, 2110
EcoT38I GRGCYC 3 cut(s) 27, 829, 1698
ErhI CCWWGG 4 cut(s) 662, 952, 1422, 2110
Esp3I CGTCTC 1 cut(s) 1075
FalI AAGNNNNNCTT 2 cut(s) 1189, 1221
FaqI GGGAC 3 cut(s) 24, 722, 795
FbaI TGATCA 1 cut(s) 1597
FblI GTMKAC 2 cut(s) 1352, 2622
Fnu4HI GCNGC 5 cut(s) 69, 206, 387, 2385, 2388
FriOI GRGCYC 3 cut(s) 27, 829, 1698
Fsp4HI GCNGC 5 cut(s) 69, 206, 387, 2385, 2388
FspBI CTAG 7 cut(s) 546, 663, 1511, 2003, 2195, 2391, 2408
GluI GCNGC 5 cut(s) 69, 206, 387, 2385, 2388
GsaI CCCAGC 1 cut(s) 1043
GsuI CTGGAG 3 cut(s) 684, 1762, 2513
HapII CCGG 8 cut(s) 62, 470, 491, 842, 854, 1136, 1989, 2362
HgaI GACGC 2 cut(s) 134, 2390
Hin1I GRCGYC 1 cut(s) 126
HincII GTYRAC 1 cut(s) 1320
HindII GTYRAC 1 cut(s) 1320
HpaII CCGG 8 cut(s) 62, 470, 491, 842, 854, 1136, 1989, 2362
HphI GGTGA 4 cut(s) 16, 1202, 1346, 1658
Hpy166II GTNNAC 5 cut(s) 1008, 1320, 1353, 2024, 2623
Hpy188I TCNGA 7 cut(s) 463, 1405, 1441, 1995, 2017, 2423, 2571
Hpy8I GTNNAC 5 cut(s) 1008, 1320, 1353, 2024, 2623
Hpy99I CGWCG 1 cut(s) 1505
HpyAV CCTTC 7 cut(s) 1191, 1446, 1554, 1643, 1709, 2440, 2566
HpyCH4III ACNGT 5 cut(s) 1054, 1763, 1871, 1938, 2627
HpyCH4IV ACGT 1 cut(s) 1846
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 285, 574, 1407
HpyF3I CTNAG 8 cut(s) 189, 462, 1402, 1431, 2035, 2324, 2582, 2612
HpySE526I ACGT 1 cut(s) 1846
Hsp92I GRCGYC 1 cut(s) 126
Kpn2I TCCGGA 1 cut(s) 2361
Ksp22I TGATCA 1 cut(s) 1597
Kzo9I GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
LguI GCTCTTC 1 cut(s) 1500
LmnI GCTCC 5 cut(s) 85, 703, 832, 2127, 2575
Lsp1109I GCAGC 4 cut(s) 217, 373, 2371, 2374
LweI GCATC 3 cut(s) 1171, 1786, 2185
MaeI CTAG 7 cut(s) 546, 663, 1511, 2003, 2195, 2391, 2408
MaeII ACGT 1 cut(s) 1846
MaeIII GTNAC 6 cut(s) 258, 967, 1624, 1781, 1865, 2030
MalI GATC 7 cut(s) 460, 1545, 1599, 1654, 1756, 2086, 2604
MboI GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
MflI RGATCY 3 cut(s) 458, 1652, 2084
MhlI GDGCHC 3 cut(s) 27, 829, 1698
MlsI TGGCCA 2 cut(s) 585, 1823
MluNI TGGCCA 2 cut(s) 585, 1823
MlyI GAGTC 6 cut(s) 52, 113, 154, 1115, 1892, 2482
MmeI TCCRAC 4 cut(s) 637, 1973, 2020, 2421
Mox20I TGGCCA 2 cut(s) 585, 1823
MroI TCCGGA 1 cut(s) 2361
MscI TGGCCA 2 cut(s) 585, 1823
MseI TTAA 8 cut(s) 197, 621, 815, 987, 996, 1371, 1386, 2211
MslI CAYNNNNRTG 3 cut(s) 641, 1493, 2678
Msp20I TGGCCA 2 cut(s) 585, 1823
MspA1I CMGCKG 1 cut(s) 2485
MspI CCGG 8 cut(s) 62, 470, 491, 842, 854, 1136, 1989, 2362
Mva1269I GAATGC 1 cut(s) 250
MwoI GCNNNNNNNGC 4 cut(s) 77, 285, 574, 1407
NciI CCSGG 2 cut(s) 470, 842
NcoI CCATGG 1 cut(s) 2110
NdeII GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
NheI GCTAGC 1 cut(s) 2390
NlaIV GGNNCC 9 cut(s) 40, 100, 421, 783, 828, 963, 1987, 2246, 2577
NmeAIII GCCGAG 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 258
NspI RCATGY 1 cut(s) 2335
NspV TTCGAA 1 cut(s) 1345
PaeR7I CTCGAG 1 cut(s) 1963
PceI AGGCCT 3 cut(s) 667, 679, 1719
PciI ACATGT 1 cut(s) 2331
PciSI GCTCTTC 1 cut(s) 1500
PctI GAATGC 1 cut(s) 250
PflMI CCANNNNNTGG 2 cut(s) 416, 689
PfoI TCCNGGA 1 cut(s) 727
PinAI ACCGGT 2 cut(s) 490, 1988
PkrI GCNGC 5 cut(s) 70, 207, 388, 2386, 2389
PleI GAGTC 6 cut(s) 52, 112, 154, 1115, 1891, 2482
PpsI GAGTC 6 cut(s) 52, 112, 154, 1115, 1891, 2482
PpuMI RGGWCCY 2 cut(s) 731, 782
PscI ACATGT 1 cut(s) 2331
PshAI GACNNNNGTC 1 cut(s) 62
PshBI ATTAAT 1 cut(s) 197
PsiI TTATAA 1 cut(s) 878
Psp124BI GAGCTC 2 cut(s) 27, 1698
Psp5II RGGWCCY 2 cut(s) 731, 782
PspFI CCCAGC 1 cut(s) 1039
PspN4I GGNNCC 9 cut(s) 40, 100, 421, 783, 828, 963, 1987, 2246, 2577
PspPPI RGGWCCY 2 cut(s) 731, 782
PsrI GAACNNNNNNTAC 2 cut(s) 2342, 2374
PstNI CAGNNNCTG 2 cut(s) 734, 1741
PsuI RGATCY 3 cut(s) 458, 1652, 2084
PvuII CAGCTG 1 cut(s) 2485
RsaI GTAC 6 cut(s) 318, 369, 929, 1009, 1593, 2225
RsaNI GTAC 6 cut(s) 317, 368, 928, 1008, 1592, 2224
RseI CAYNNNNRTG 3 cut(s) 641, 1493, 2678
SacI GAGCTC 2 cut(s) 27, 1698
SapI GCTCTTC 1 cut(s) 1500
SaqAI TTAA 8 cut(s) 197, 621, 815, 987, 996, 1371, 1386, 2211
SatI GCNGC 5 cut(s) 69, 206, 387, 2385, 2388
Sau3AI GATC 7 cut(s) 458, 1543, 1597, 1652, 1754, 2084, 2602
SchI GAGTC 6 cut(s) 52, 113, 154, 1115, 1892, 2482
SduI GDGCHC 3 cut(s) 27, 829, 1698
SfaNI GCATC 3 cut(s) 1171, 1786, 2185
SfcI CTRYAG 2 cut(s) 1116, 2428
Sfr274I CTCGAG 1 cut(s) 1963
SfuI TTCGAA 1 cut(s) 1345
SinI GGWCC 9 cut(s) 38, 153, 419, 659, 692, 731, 782, 1200, 2078
SlaI CTCGAG 1 cut(s) 1963
SmiMI CAYNNNNRTG 3 cut(s) 641, 1493, 2678
SmlI CTYRAG 4 cut(s) 673, 1517, 1804, 1963
SmoI CTYRAG 4 cut(s) 673, 1517, 1804, 1963
SseBI AGGCCT 3 cut(s) 667, 679, 1719
SsiI CCGC 5 cut(s) 69, 374, 761, 2135, 2242
SspI AATATT 2 cut(s) 874, 2534
SspMI CTAG 7 cut(s) 546, 663, 1511, 2003, 2195, 2391, 2408
SstI GAGCTC 2 cut(s) 27, 1698
StuI AGGCCT 3 cut(s) 667, 679, 1719
StyI CCWWGG 4 cut(s) 662, 952, 1422, 2110
TaaI ACNGT 5 cut(s) 1054, 1763, 1871, 1938, 2627
TaiI ACGT 1 cut(s) 1849
TaqI TCGA 4 cut(s) 1345, 1500, 1964, 2605
TatI WGTACW 1 cut(s) 1007
TauI GCSGC 1 cut(s) 71
Tru1I TTAA 8 cut(s) 197, 621, 815, 987, 996, 1371, 1386, 2211
Tru9I TTAA 8 cut(s) 197, 621, 815, 987, 996, 1371, 1386, 2211
TscAI CASTG 6 cut(s) 1041, 1192, 1876, 1882, 2145, 2287
TseFI GTSAC 1 cut(s) 258
TseI GCWGC 4 cut(s) 205, 386, 2384, 2387
Tsp45I GTSAC 1 cut(s) 258
TspGWI ACGGA 2 cut(s) 1093, 2633
TspRI CASTG 6 cut(s) 1041, 1192, 1876, 1882, 2145, 2287
Van91I CCANNNNNTGG 2 cut(s) 416, 689
VpaK11BI GGWCC 9 cut(s) 38, 153, 419, 659, 692, 731, 782, 1200, 2078
VspI ATTAAT 1 cut(s) 197
XapI RAATTY 5 cut(s) 1243, 1366, 1816, 1837, 2450
XbaI TCTAGA 2 cut(s) 545, 2194
XceI RCATGY 1 cut(s) 2335
XcmI CCANNNNNNNNNTGG 1 cut(s) 413
XhoI CTCGAG 1 cut(s) 1963
XmaJI CCTAGG 1 cut(s) 662
XmiI GTMKAC 2 cut(s) 1352, 2622
XspI CTAG 7 cut(s) 546, 663, 1511, 2003, 2195, 2391, 2408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.