Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MoeA_N | PF03453 | 12 - 174 | 6.5e-39 | MoeA N-terminal region (domain I and II) |
| MoCF_biosynth | PF00994 | 187 - 335 | 2.2e-27 | Probable molybdopterin binding domain |
| MoeA_C | PF03454 | 349 - 424 | 9.4e-09 | MoeA C-terminal region (domain IV) |
| MoCF_biosynth | PF00994 | 468 - 616 | 5.7e-31 | Probable molybdopterin binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1944 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1261 |
| Acc16I | TGCGCA | 1 cut(s) | 1908 |
| Acc65I | GGTACC | 2 cut(s) | 991, 1531 |
| AccB1I | GGYRCC | 2 cut(s) | 991, 1531 |
| AccI | GTMKAC | 1 cut(s) | 505 |
| AccII | CGCG | 4 cut(s) | 138, 615, 884, 1383 |
| AciI | CCGC | 9 cut(s) | 8, 21, 41, 73, 615, 884, 1003, 1154, 1805 |
| AclWI | GGATC | 2 cut(s) | 1070, 1602 |
| AcoI | YGGCCR | 3 cut(s) | 123, 616, 1165 |
| AcsI | RAATTY | 1 cut(s) | 1091 |
| AcuI | CTGAAG | 3 cut(s) | 183, 252, 1043 |
| AcyI | GRCGYC | 1 cut(s) | 261 |
| AfaI | GTAC | 6 cut(s) | 336, 993, 1162, 1291, 1533, 1960 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 115, 433, 557, 599, 625, 1232, 1440 |
| AflIII | ACRYGT | 1 cut(s) | 1894 |
| AgsI | TTSAA | 2 cut(s) | 722, 1521 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 603 |
| AjnI | CCWGG | 6 cut(s) | 208, 274, 862, 946, 1141, 1681 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1453, 1485 |
| AluBI | AGCT | 7 cut(s) | 197, 656, 963, 1331, 1373, 1403, 1913 |
| AluI | AGCT | 7 cut(s) | 197, 656, 963, 1331, 1373, 1403, 1913 |
| Alw21I | GWGCWC | 1 cut(s) | 1938 |
| Alw26I | GTCTC | 2 cut(s) | 5, 1383 |
| AlwI | GGATC | 2 cut(s) | 1070, 1602 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 76, 1472 |
| Ama87I | CYCGRG | 3 cut(s) | 110, 1321, 1954 |
| AoxI | GGCC | 6 cut(s) | 123, 206, 616, 1165, 1442, 1950 |
| ApeKI | GCWGC | 7 cut(s) | 76, 491, 653, 943, 1748, 1751, 1913 |
| ApoI | RAATTY | 1 cut(s) | 1091 |
| AseI | ATTAAT | 1 cut(s) | 1302 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 54 |
| Asp718I | GGTACC | 2 cut(s) | 991, 1531 |
| AspLEI | GCGC | 2 cut(s) | 140, 1909 |
| AspS9I | GGNCC | 5 cut(s) | 206, 305, 1325, 1442, 1457 |
| AsuC2I | CCSGG | 4 cut(s) | 1322, 1323, 1435, 1791 |
| AsuHPI | GGTGA | 5 cut(s) | 79, 544, 760, 1597, 1732 |
| AvaI | CYCGRG | 3 cut(s) | 110, 1321, 1954 |
| AvaII | GGWCC | 3 cut(s) | 305, 1325, 1457 |
| BaeGI | GKGCMC | 1 cut(s) | 96 |
| BalI | TGGCCA | 1 cut(s) | 1167 |
| BanI | GGYRCC | 2 cut(s) | 991, 1531 |
| BauI | CACGAG | 1 cut(s) | 1632 |
| BbsI | GAAGAC | 1 cut(s) | 1679 |
| Bbv12I | GWGCWC | 1 cut(s) | 1938 |
| BbvI | GCAGC | 7 cut(s) | 63, 478, 665, 930, 1735, 1763, 1900 |
| BccI | CCATC | 8 cut(s) | 173, 245, 311, 987, 1007, 1011, 1107, 1566 |
| BceAI | ACGGC | 1 cut(s) | 1539 |
| BciT130I | CCWGG | 6 cut(s) | 210, 276, 864, 948, 1143, 1683 |
| BciVI | GTATCC | 2 cut(s) | 228, 1918 |
| BclI | TGATCA | 1 cut(s) | 1776 |
| BcnI | CCSGG | 4 cut(s) | 1322, 1323, 1435, 1791 |
| BcoDI | GTCTC | 2 cut(s) | 5, 1383 |
| BfaI | CTAG | 1 cut(s) | 699 |
| BfmI | CTRYAG | 5 cut(s) | 222, 492, 662, 1565, 1749 |
| BfuI | GTATCC | 2 cut(s) | 228, 1918 |
| BmcAI | AGTACT | 2 cut(s) | 1162, 1291 |
| Bme18I | GGWCC | 3 cut(s) | 305, 1325, 1457 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 603 |
| BmeT110I | CYCGRG | 3 cut(s) | 110, 1321, 1954 |
| BmgT120I | GGNCC | 5 cut(s) | 206, 305, 1325, 1442, 1457 |
| BmiI | GGNNCC | 4 cut(s) | 993, 1326, 1507, 1533 |
| BmsI | GCATC | 7 cut(s) | 94, 176, 316, 676, 1375, 1439, 1692 |
| BpiI | GAAGAC | 1 cut(s) | 1679 |
| BpmI | CTGGAG | 4 cut(s) | 231, 321, 795, 1629 |
| BpuEI | CTTGAG | 1 cut(s) | 1826 |
| BpuMI | CCSGG | 4 cut(s) | 1322, 1323, 1435, 1791 |
| BsaHI | GRCGYC | 1 cut(s) | 261 |
| BsaI | GGTCTC | 1 cut(s) | 5 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 256, 286, 1497, 1527, 1814, 1844 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 115, 433, 557, 599, 625, 1232, 1440 |
| Bse118I | RCCGGY | 2 cut(s) | 140, 242 |
| Bse1I | ACTGG | 8 cut(s) | 304, 402, 431, 956, 1079, 1168, 1624, 1966 |
| BseBI | CCWGG | 6 cut(s) | 210, 276, 864, 948, 1143, 1683 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 115, 433, 557, 599, 625, 1232, 1440 |
| BseMII | CTCAG | 4 cut(s) | 50, 599, 1365, 1803 |
| BseNI | ACTGG | 8 cut(s) | 304, 402, 431, 956, 1079, 1168, 1624, 1966 |
| BseRI | GAGGAG | 1 cut(s) | 1518 |
| BseSI | GKGCMC | 1 cut(s) | 96 |
| BseXI | GCAGC | 7 cut(s) | 63, 478, 665, 930, 1735, 1763, 1900 |
| BseYI | CCCAGC | 1 cut(s) | 1439 |
| BsgI | GTGCAG | 1 cut(s) | 1064 |
| Bsh1236I | CGCG | 4 cut(s) | 138, 615, 884, 1383 |
| BshFI | GGCC | 6 cut(s) | 125, 208, 618, 1167, 1444, 1952 |
| BshNI | GGYRCC | 2 cut(s) | 991, 1531 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1938 |
| BsiHKCI | CYCGRG | 3 cut(s) | 110, 1321, 1954 |
| BsiSI | CCGG | 6 cut(s) | 141, 243, 1322, 1434, 1445, 1790 |
| BslFI | GGGAC | 5 cut(s) | 292, 641, 844, 1267, 1883 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 115, 433, 557, 599, 625, 1232, 1440 |
| BsmAI | GTCTC | 2 cut(s) | 5, 1383 |
| BsmFI | GGGAC | 5 cut(s) | 292, 641, 844, 1267, 1883 |
| BsmI | GAATGC | 1 cut(s) | 367 |
| BsnI | GGCC | 6 cut(s) | 125, 208, 618, 1167, 1444, 1952 |
| Bso31I | GGTCTC | 1 cut(s) | 5 |
| BsoBI | CYCGRG | 3 cut(s) | 110, 1321, 1954 |
| Bsp1286I | GDGCHC | 2 cut(s) | 96, 1938 |
| Bsp1407I | TGTACA | 1 cut(s) | 334 |
| Bsp143I | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| Bsp68I | TCGCGA | 1 cut(s) | 1383 |
| BspACI | CCGC | 9 cut(s) | 8, 21, 41, 73, 615, 884, 1003, 1154, 1805 |
| BspANI | GGCC | 6 cut(s) | 125, 208, 618, 1167, 1444, 1952 |
| BspCNI | CTCAG | 4 cut(s) | 51, 600, 1366, 1804 |
| BspFNI | CGCG | 4 cut(s) | 138, 615, 884, 1383 |
| BspHI | TCATGA | 1 cut(s) | 1698 |
| BspLI | GGNNCC | 4 cut(s) | 993, 1326, 1507, 1533 |
| BspMAI | CTGCAG | 3 cut(s) | 496, 1569, 1753 |
| BspPI | GGATC | 2 cut(s) | 1070, 1602 |
| BspQI | GCTCTTC | 1 cut(s) | 35 |
| BspT107I | GGYRCC | 2 cut(s) | 991, 1531 |
| BspTNI | GGTCTC | 1 cut(s) | 5 |
| BsrFI | RCCGGY | 2 cut(s) | 140, 242 |
| BsrGI | TGTACA | 1 cut(s) | 334 |
| BsrI | ACTGG | 8 cut(s) | 304, 402, 431, 956, 1079, 1168, 1624, 1966 |
| BssAI | RCCGGY | 2 cut(s) | 140, 242 |
| BssMI | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| BssNAI | GTATAC | 1 cut(s) | 506 |
| BssNI | GRCGYC | 1 cut(s) | 261 |
| BssSI | CACGAG | 1 cut(s) | 1632 |
| BssT1I | CCWWGG | 4 cut(s) | 1460, 1509, 1609, 1920 |
| Bst1107I | GTATAC | 1 cut(s) | 506 |
| Bst2BI | CACGAG | 1 cut(s) | 1632 |
| Bst2UI | CCWGG | 6 cut(s) | 210, 276, 864, 948, 1143, 1683 |
| Bst6I | CTCTTC | 1 cut(s) | 35 |
| BstACI | GRCGYC | 1 cut(s) | 261 |
| BstAUI | TGTACA | 1 cut(s) | 334 |
| BstC8I | GCNNGC | 6 cut(s) | 142, 1047, 1051, 1227, 1836, 1911 |
| BstDEI | CTNAG | 4 cut(s) | 59, 608, 1374, 1812 |
| BstDSI | CCRYGG | 1 cut(s) | 570 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 113, 1230 |
| BstFNI | CGCG | 4 cut(s) | 138, 615, 884, 1383 |
| BstHHI | GCGC | 2 cut(s) | 140, 1909 |
| BstKTI | GATC | 6 cut(s) | 624, 729, 891, 1078, 1597, 1779 |
| BstMAI | GTCTC | 2 cut(s) | 5, 1383 |
| BstMBI | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 194, 1019, 1436, 1913 |
| BstNI | CCWGG | 6 cut(s) | 210, 276, 864, 948, 1143, 1683 |
| BstNSI | RCATGY | 3 cut(s) | 365, 1789, 1898 |
| BstSFI | CTRYAG | 5 cut(s) | 222, 492, 662, 1565, 1749 |
| BstSLI | GKGCMC | 1 cut(s) | 96 |
| BstUI | CGCG | 4 cut(s) | 138, 615, 884, 1383 |
| BstV1I | GCAGC | 7 cut(s) | 63, 478, 665, 930, 1735, 1763, 1900 |
| BstV2I | GAAGAC | 1 cut(s) | 1679 |
| BstX2I | RGATCY | 2 cut(s) | 1075, 1594 |
| BstYI | RGATCY | 2 cut(s) | 1075, 1594 |
| BstZ17I | GTATAC | 1 cut(s) | 506 |
| BsuI | GTATCC | 2 cut(s) | 228, 1918 |
| BsuRI | GGCC | 6 cut(s) | 125, 208, 618, 1167, 1444, 1952 |
| BtgI | CCRYGG | 1 cut(s) | 570 |
| BtgZI | GCGATG | 2 cut(s) | 264, 1398 |
| BtsI | GCAGTG | 3 cut(s) | 23, 195, 1243 |
| BtsIMutI | CAGTG | 7 cut(s) | 23, 195, 348, 438, 812, 1243, 1617 |
| BtuMI | TCGCGA | 1 cut(s) | 1383 |
| Cac8I | GCNNGC | 6 cut(s) | 142, 1047, 1051, 1227, 1836, 1911 |
| CaiI | CAGNNNCTG | 2 cut(s) | 76, 1472 |
| CciI | TCATGA | 1 cut(s) | 1698 |
| CfoI | GCGC | 2 cut(s) | 140, 1909 |
| Cfr10I | RCCGGY | 2 cut(s) | 140, 242 |
| Cfr13I | GGNCC | 5 cut(s) | 206, 305, 1325, 1442, 1457 |
| Cfr9I | CCCGGG | 1 cut(s) | 1321 |
| CseI | GACGC | 2 cut(s) | 250, 1905 |
| CsiI | ACCWGGT | 1 cut(s) | 1681 |
| Csp6I | GTAC | 6 cut(s) | 335, 992, 1161, 1290, 1532, 1959 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1509, 1544 |
| CviQI | GTAC | 6 cut(s) | 335, 992, 1161, 1290, 1532, 1959 |
| DdeI | CTNAG | 4 cut(s) | 59, 608, 1374, 1812 |
| DpnI | GATC | 6 cut(s) | 623, 728, 890, 1077, 1596, 1778 |
| DpnII | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| DraI | TTTAAA | 1 cut(s) | 1716 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1261 |
| DriI | GACNNNNNGTC | 1 cut(s) | 603 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1261 |
| EaeI | YGGCCR | 3 cut(s) | 123, 616, 1165 |
| Eam1104I | CTCTTC | 1 cut(s) | 35 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 603 |
| EarI | CTCTTC | 1 cut(s) | 35 |
| EciI | GGCGGA | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 4 cut(s) | 1460, 1509, 1609, 1920 |
| Eco31I | GGTCTC | 1 cut(s) | 5 |
| Eco32I | GATATC | 3 cut(s) | 424, 471, 1582 |
| Eco47I | GGWCC | 3 cut(s) | 305, 1325, 1457 |
| Eco57I | CTGAAG | 3 cut(s) | 183, 252, 1043 |
| Eco88I | CYCGRG | 3 cut(s) | 110, 1321, 1954 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 113, 1230 |
| EcoRI | GAATTC | 1 cut(s) | 1091 |
| EcoRII | CCWGG | 6 cut(s) | 208, 274, 862, 946, 1141, 1681 |
| EcoRV | GATATC | 3 cut(s) | 424, 471, 1582 |
| EcoT14I | CCWWGG | 4 cut(s) | 1460, 1509, 1609, 1920 |
| ErhI | CCWWGG | 4 cut(s) | 1460, 1509, 1609, 1920 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 702, 734 |
| FaqI | GGGAC | 5 cut(s) | 292, 641, 844, 1267, 1883 |
| FauI | CCCGC | 1 cut(s) | 28 |
| FauNDI | CATATG | 1 cut(s) | 289 |
| FbaI | TGATCA | 1 cut(s) | 1776 |
| FblI | GTMKAC | 1 cut(s) | 505 |
| FspBI | CTAG | 1 cut(s) | 699 |
| FspI | TGCGCA | 1 cut(s) | 1908 |
| GlaI | GCGC | 2 cut(s) | 139, 1908 |
| GsaI | CCCAGC | 1 cut(s) | 1443 |
| GsuI | CTGGAG | 4 cut(s) | 231, 321, 795, 1629 |
| HaeIII | GGCC | 6 cut(s) | 125, 208, 618, 1167, 1444, 1952 |
| HapII | CCGG | 6 cut(s) | 141, 243, 1322, 1434, 1445, 1790 |
| HgaI | GACGC | 2 cut(s) | 250, 1905 |
| HhaI | GCGC | 2 cut(s) | 140, 1909 |
| Hin1I | GRCGYC | 1 cut(s) | 261 |
| Hin6I | GCGC | 2 cut(s) | 138, 1907 |
| HinP1I | GCGC | 2 cut(s) | 138, 1907 |
| HincII | GTYRAC | 1 cut(s) | 1770 |
| HindII | GTYRAC | 1 cut(s) | 1770 |
| HinfI | GANTC | 7 cut(s) | 255, 377, 610, 629, 1376, 1795, 1970 |
| HpaII | CCGG | 6 cut(s) | 141, 243, 1322, 1434, 1445, 1790 |
| HphI | GGTGA | 5 cut(s) | 79, 544, 760, 1597, 1732 |
| Hpy166II | GTNNAC | 2 cut(s) | 506, 1770 |
| Hpy188I | TCNGA | 9 cut(s) | 60, 202, 405, 609, 898, 1040, 1112, 1282, 1492 |
| Hpy188III | TCNNGA | 8 cut(s) | 112, 474, 774, 1088, 1382, 1585, 1646, 1699 |
| Hpy8I | GTNNAC | 2 cut(s) | 506, 1770 |
| HpyAV | CCTTC | 5 cut(s) | 109, 516, 529, 707, 1064 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 194, 1019, 1436, 1913 |
| HpyF3I | CTNAG | 4 cut(s) | 59, 608, 1374, 1812 |
| Hsp92I | GRCGYC | 1 cut(s) | 261 |
| HspAI | GCGC | 2 cut(s) | 138, 1907 |
| KpnI | GGTACC | 2 cut(s) | 995, 1535 |
| KroI | GCCGGC | 1 cut(s) | 140 |
| KroNI | GCCGGC | 1 cut(s) | 142 |
| Ksp22I | TGATCA | 1 cut(s) | 1776 |
| Kzo9I | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| LguI | GCTCTTC | 1 cut(s) | 35 |
| LmnI | GCTCC | 2 cut(s) | 1505, 1933 |
| Lsp1109I | GCAGC | 7 cut(s) | 63, 478, 665, 930, 1735, 1763, 1900 |
| LweI | GCATC | 7 cut(s) | 94, 176, 316, 676, 1375, 1439, 1692 |
| MabI | ACCWGGT | 1 cut(s) | 1681 |
| MaeI | CTAG | 1 cut(s) | 699 |
| MaeIII | GTNAC | 7 cut(s) | 85, 262, 292, 440, 1477, 1639, 1720 |
| MalI | GATC | 6 cut(s) | 623, 728, 890, 1077, 1596, 1778 |
| MboI | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| MboII | GAAGA | 6 cut(s) | 22, 722, 755, 1049, 1679, 1682 |
| MflI | RGATCY | 2 cut(s) | 1075, 1594 |
| MhlI | GDGCHC | 2 cut(s) | 96, 1938 |
| MlsI | TGGCCA | 1 cut(s) | 1167 |
| MluCI | AATT | 7 cut(s) | 483, 498, 753, 892, 1091, 1361, 1551 |
| MluNI | TGGCCA | 1 cut(s) | 1167 |
| MlyI | GAGTC | 4 cut(s) | 619, 623, 1385, 1964 |
| MmeI | TCCRAC | 3 cut(s) | 499, 657, 1197 |
| Mox20I | TGGCCA | 1 cut(s) | 1167 |
| MreI | CGCCGGCG | 1 cut(s) | 140 |
| MroNI | GCCGGC | 1 cut(s) | 140 |
| MroXI | GAANNNNTTC | 1 cut(s) | 54 |
| MscI | TGGCCA | 1 cut(s) | 1167 |
| MseI | TTAA | 7 cut(s) | 1121, 1190, 1302, 1554, 1715, 1853, 1996 |
| MslI | CAYNNNNRTG | 3 cut(s) | 372, 672, 1784 |
| Msp20I | TGGCCA | 1 cut(s) | 1167 |
| MspA1I | CMGCKG | 1 cut(s) | 73 |
| MspI | CCGG | 6 cut(s) | 141, 243, 1322, 1434, 1445, 1790 |
| Mva1269I | GAATGC | 1 cut(s) | 367 |
| MvaI | CCWGG | 6 cut(s) | 210, 276, 864, 948, 1143, 1683 |
| MvnI | CGCG | 4 cut(s) | 138, 615, 884, 1383 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 194, 1019, 1436, 1913 |
| NaeI | GCCGGC | 1 cut(s) | 142 |
| NciI | CCSGG | 4 cut(s) | 1322, 1323, 1435, 1791 |
| NdeI | CATATG | 1 cut(s) | 289 |
| NdeII | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| NgoMIV | GCCGGC | 1 cut(s) | 140 |
| NlaIV | GGNNCC | 4 cut(s) | 993, 1326, 1507, 1533 |
| NmeAIII | GCCGAG | 1 cut(s) | 151 |
| NmuCI | GTSAC | 4 cut(s) | 85, 262, 440, 1720 |
| NruI | TCGCGA | 1 cut(s) | 1383 |
| NsbI | TGCGCA | 1 cut(s) | 1908 |
| NspI | RCATGY | 3 cut(s) | 365, 1789, 1898 |
| PaeR7I | CTCGAG | 1 cut(s) | 110 |
| PagI | TCATGA | 1 cut(s) | 1698 |
| PciI | ACATGT | 1 cut(s) | 1894 |
| PciSI | GCTCTTC | 1 cut(s) | 35 |
| PctI | GAATGC | 1 cut(s) | 367 |
| PdiI | GCCGGC | 1 cut(s) | 142 |
| PdmI | GAANNNNTTC | 1 cut(s) | 54 |
| PfeI | GAWTC | 3 cut(s) | 255, 377, 1795 |
| PflFI | GACNNNGTC | 1 cut(s) | 803 |
| PleI | GAGTC | 4 cut(s) | 618, 623, 1384, 1964 |
| PpsI | GAGTC | 4 cut(s) | 618, 623, 1384, 1964 |
| PscI | ACATGT | 1 cut(s) | 1894 |
| PshBI | ATTAAT | 1 cut(s) | 1302 |
| PsiI | TTATAA | 1 cut(s) | 1944 |
| Psp6I | CCWGG | 6 cut(s) | 208, 274, 862, 946, 1141, 1681 |
| PspFI | CCCAGC | 1 cut(s) | 1439 |
| PspGI | CCWGG | 6 cut(s) | 208, 274, 862, 946, 1141, 1681 |
| PspN4I | GGNNCC | 4 cut(s) | 993, 1326, 1507, 1533 |
| PspPI | GGNCC | 5 cut(s) | 206, 305, 1325, 1442, 1457 |
| PstI | CTGCAG | 3 cut(s) | 496, 1569, 1753 |
| PstNI | CAGNNNCTG | 2 cut(s) | 76, 1472 |
| PsuI | RGATCY | 2 cut(s) | 1075, 1594 |
| PsyI | GACNNNGTC | 1 cut(s) | 803 |
| RruI | TCGCGA | 1 cut(s) | 1383 |
| RsaI | GTAC | 6 cut(s) | 336, 993, 1162, 1291, 1533, 1960 |
| RsaNI | GTAC | 6 cut(s) | 335, 992, 1161, 1290, 1532, 1959 |
| RseI | CAYNNNNRTG | 3 cut(s) | 372, 672, 1784 |
| SapI | GCTCTTC | 1 cut(s) | 35 |
| SaqAI | TTAA | 7 cut(s) | 1121, 1190, 1302, 1554, 1715, 1853, 1996 |
| Sau3AI | GATC | 6 cut(s) | 621, 726, 888, 1075, 1594, 1776 |
| Sau96I | GGNCC | 5 cut(s) | 206, 305, 1325, 1442, 1457 |
| ScaI | AGTACT | 2 cut(s) | 1162, 1291 |
| SchI | GAGTC | 4 cut(s) | 619, 623, 1385, 1964 |
| SduI | GDGCHC | 2 cut(s) | 96, 1938 |
| SexAI | ACCWGGT | 1 cut(s) | 1681 |
| SfaNI | GCATC | 7 cut(s) | 94, 176, 316, 676, 1375, 1439, 1692 |
| SfcI | CTRYAG | 5 cut(s) | 222, 492, 662, 1565, 1749 |
| Sfr274I | CTCGAG | 1 cut(s) | 110 |
| SgrAI | CRCCGGYG | 1 cut(s) | 140 |
| SinI | GGWCC | 3 cut(s) | 305, 1325, 1457 |
| SlaI | CTCGAG | 1 cut(s) | 110 |
| SmaI | CCCGGG | 1 cut(s) | 1323 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 372, 672, 1784 |
| SmlI | CTYRAG | 2 cut(s) | 110, 1841 |
| SmoI | CTYRAG | 2 cut(s) | 110, 1841 |
| Sse9I | AATT | 7 cut(s) | 483, 498, 753, 892, 1091, 1361, 1551 |
| SsiI | CCGC | 9 cut(s) | 8, 21, 41, 73, 615, 884, 1003, 1154, 1805 |
| SspMI | CTAG | 1 cut(s) | 699 |
| StyI | CCWWGG | 4 cut(s) | 1460, 1509, 1609, 1920 |
| TaqI | TCGA | 3 cut(s) | 111, 1584, 1891 |
| TaqII | GACCGA | 1 cut(s) | 322 |
| TasI | AATT | 7 cut(s) | 483, 498, 753, 892, 1091, 1361, 1551 |
| TatI | WGTACW | 3 cut(s) | 334, 1160, 1289 |
| TauI | GCSGC | 3 cut(s) | 44, 76, 618 |
| TfiI | GAWTC | 3 cut(s) | 255, 377, 1795 |
| Tru1I | TTAA | 7 cut(s) | 1121, 1190, 1302, 1554, 1715, 1853, 1996 |
| Tru9I | TTAA | 7 cut(s) | 1121, 1190, 1302, 1554, 1715, 1853, 1996 |
| TscAI | CASTG | 7 cut(s) | 30, 195, 355, 438, 819, 1243, 1624 |
| TseFI | GTSAC | 4 cut(s) | 85, 262, 440, 1720 |
| TseI | GCWGC | 7 cut(s) | 76, 491, 653, 943, 1748, 1751, 1913 |
| Tsp45I | GTSAC | 4 cut(s) | 85, 262, 440, 1720 |
| TspDTI | ATGAA | 6 cut(s) | 22, 390, 594, 723, 872, 1211 |
| TspGWI | ACGGA | 4 cut(s) | 160, 416, 1073, 1357 |
| TspMI | CCCGGG | 1 cut(s) | 1321 |
| TspRI | CASTG | 7 cut(s) | 30, 195, 355, 438, 819, 1243, 1624 |
| Tth111I | GACNNNGTC | 1 cut(s) | 803 |
| VpaK11BI | GGWCC | 3 cut(s) | 305, 1325, 1457 |
| VspI | ATTAAT | 1 cut(s) | 1302 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 113, 1230 |
| XapI | RAATTY | 1 cut(s) | 1091 |
| XceI | RCATGY | 3 cut(s) | 365, 1789, 1898 |
| XhoI | CTCGAG | 1 cut(s) | 110 |
| XmaI | CCCGGG | 1 cut(s) | 1321 |
| XmiI | GTMKAC | 1 cut(s) | 505 |
| XmnI | GAANNNNTTC | 1 cut(s) | 54 |
| XspI | CTAG | 1 cut(s) | 699 |
| ZrmI | AGTACT | 2 cut(s) | 1162, 1291 |