Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MRP-L20 | PF12824 | 141 - 218 | 1.2e-06 | Mitochondrial ribosomal protein subunit L20 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 343 |
| Acc36I | ACCTGC | 1 cut(s) | 214 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 627 |
| AccBSI | CCGCTC | 1 cut(s) | 327 |
| AccII | CGCG | 1 cut(s) | 483 |
| AciI | CCGC | 3 cut(s) | 209, 212, 327 |
| AcoI | YGGCCR | 1 cut(s) | 582 |
| AcuI | CTGAAG | 2 cut(s) | 626, 653 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 102, 212, 586, 627 |
| AgsI | TTSAA | 4 cut(s) | 45, 119, 158, 451 |
| AjnI | CCWGG | 2 cut(s) | 487, 579 |
| AluBI | AGCT | 7 cut(s) | 122, 130, 138, 640, 664, 694, 708 |
| AluI | AGCT | 7 cut(s) | 122, 130, 138, 640, 664, 694, 708 |
| Alw21I | GWGCWC | 2 cut(s) | 140, 696 |
| Alw26I | GTCTC | 1 cut(s) | 329 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 10 |
| AoxI | GGCC | 1 cut(s) | 582 |
| AspLEI | GCGC | 2 cut(s) | 483, 579 |
| AsuHPI | GGTGA | 1 cut(s) | 179 |
| BalI | TGGCCA | 1 cut(s) | 584 |
| BanII | GRGCYC | 2 cut(s) | 140, 696 |
| Bbv12I | GWGCWC | 2 cut(s) | 140, 696 |
| BccI | CCATC | 5 cut(s) | 164, 176, 293, 425, 429 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 473, 507 |
| BciT130I | CCWGG | 2 cut(s) | 489, 581 |
| BcoDI | GTCTC | 1 cut(s) | 329 |
| BfmI | CTRYAG | 1 cut(s) | 348 |
| BfoI | RGCGCY | 1 cut(s) | 580 |
| BfuAI | ACCTGC | 1 cut(s) | 214 |
| BisI | GCNGC | 1 cut(s) | 210 |
| BlsI | GCNGC | 1 cut(s) | 211 |
| Bme1390I | CCNGG | 2 cut(s) | 489, 581 |
| BmrFI | CCNGG | 2 cut(s) | 489, 581 |
| BmrI | ACTGGG | 1 cut(s) | 337 |
| BmsI | GCATC | 1 cut(s) | 242 |
| BmuI | ACTGGG | 1 cut(s) | 337 |
| BpuEI | CTTGAG | 1 cut(s) | 494 |
| Bsa29I | ATCGAT | 1 cut(s) | 538 |
| BsaJI | CCNNGG | 2 cut(s) | 285, 585 |
| BsaWI | WCCGGW | 1 cut(s) | 408 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 102, 212, 586, 627 |
| Bse1I | ACTGG | 2 cut(s) | 96, 343 |
| BseBI | CCWGG | 2 cut(s) | 489, 581 |
| BseCI | ATCGAT | 1 cut(s) | 538 |
| BseDI | CCNNGG | 2 cut(s) | 285, 585 |
| BseGI | GGATG | 1 cut(s) | 440 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 102, 212, 586, 627 |
| BseMII | CTCAG | 2 cut(s) | 519, 705 |
| BseNI | ACTGG | 2 cut(s) | 96, 343 |
| BseRI | GAGGAG | 1 cut(s) | 668 |
| Bsh1236I | CGCG | 1 cut(s) | 483 |
| BshFI | GGCC | 1 cut(s) | 584 |
| BshVI | ATCGAT | 1 cut(s) | 538 |
| BsiHKAI | GWGCWC | 2 cut(s) | 140, 696 |
| BsiSI | CCGG | 1 cut(s) | 409 |
| BslFI | GGGAC | 1 cut(s) | 657 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 102, 212, 586, 627 |
| BsmAI | GTCTC | 1 cut(s) | 329 |
| BsmFI | GGGAC | 1 cut(s) | 657 |
| BsnI | GGCC | 1 cut(s) | 584 |
| Bsp1286I | GDGCHC | 2 cut(s) | 140, 696 |
| BspACI | CCGC | 3 cut(s) | 209, 212, 327 |
| BspANI | GGCC | 1 cut(s) | 584 |
| BspCNI | CTCAG | 2 cut(s) | 520, 706 |
| BspDI | ATCGAT | 1 cut(s) | 538 |
| BspFNI | CGCG | 1 cut(s) | 483 |
| BspMAI | CTGCAG | 1 cut(s) | 352 |
| BspMI | ACCTGC | 1 cut(s) | 214 |
| BspQI | GCTCTTC | 1 cut(s) | 80 |
| BsrBI | CCGCTC | 1 cut(s) | 327 |
| BsrI | ACTGG | 2 cut(s) | 96, 343 |
| BssECI | CCNNGG | 2 cut(s) | 285, 585 |
| BssT1I | CCWWGG | 2 cut(s) | 285, 585 |
| Bst2UI | CCWGG | 2 cut(s) | 489, 581 |
| Bst4CI | ACNGT | 3 cut(s) | 17, 191, 571 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 10, 613 |
| BstC8I | GCNNGC | 2 cut(s) | 464, 618 |
| BstDEI | CTNAG | 3 cut(s) | 528, 676, 714 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 584 |
| BstF5I | GGATG | 1 cut(s) | 440 |
| BstFNI | CGCG | 1 cut(s) | 483 |
| BstH2I | RGCGCY | 1 cut(s) | 580 |
| BstHHI | GCGC | 2 cut(s) | 483, 579 |
| BstMAI | GTCTC | 1 cut(s) | 329 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 613, 637, 646 |
| BstNI | CCWGG | 2 cut(s) | 489, 581 |
| BstNSI | RCATGY | 2 cut(s) | 466, 620 |
| BstSCI | CCNGG | 2 cut(s) | 487, 579 |
| BstSFI | CTRYAG | 1 cut(s) | 348 |
| BstUI | CGCG | 1 cut(s) | 483 |
| Bsu15I | ATCGAT | 1 cut(s) | 538 |
| BsuRI | GGCC | 1 cut(s) | 584 |
| BsuTUI | ATCGAT | 1 cut(s) | 538 |
| BtsCI | GGATG | 1 cut(s) | 440 |
| BtsIMutI | CAGTG | 2 cut(s) | 196, 567 |
| BveI | ACCTGC | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 2 cut(s) | 464, 618 |
| CaiI | CAGNNNCTG | 1 cut(s) | 10 |
| CfoI | GCGC | 2 cut(s) | 483, 579 |
| ClaI | ATCGAT | 1 cut(s) | 538 |
| CsiI | ACCWGGT | 1 cut(s) | 487 |
| CviAII | CATG | 3 cut(s) | 58, 463, 617 |
| DdeI | CTNAG | 3 cut(s) | 528, 676, 714 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 343 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 343 |
| EaeI | YGGCCR | 1 cut(s) | 582 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Ecl136II | GAGCTC | 2 cut(s) | 138, 694 |
| Eco130I | CCWWGG | 2 cut(s) | 285, 585 |
| Eco24I | GRGCYC | 2 cut(s) | 140, 696 |
| Eco53kI | GAGCTC | 2 cut(s) | 138, 694 |
| Eco57I | CTGAAG | 2 cut(s) | 626, 653 |
| EcoICRI | GAGCTC | 2 cut(s) | 138, 694 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 584 |
| EcoRII | CCWGG | 2 cut(s) | 487, 579 |
| EcoT14I | CCWWGG | 2 cut(s) | 285, 585 |
| EcoT22I | ATGCAT | 1 cut(s) | 235 |
| EcoT38I | GRGCYC | 2 cut(s) | 140, 696 |
| ErhI | CCWWGG | 2 cut(s) | 285, 585 |
| FaeI | CATG | 3 cut(s) | 61, 466, 620 |
| FaiI | YATR | 7 cut(s) | 23, 59, 134, 464, 594, 602, 618 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 487, 519 |
| FaqI | GGGAC | 1 cut(s) | 657 |
| FatI | CATG | 3 cut(s) | 57, 462, 616 |
| FauI | CCCGC | 1 cut(s) | 205 |
| Fnu4HI | GCNGC | 1 cut(s) | 210 |
| FokI | GGATG | 1 cut(s) | 447 |
| FriOI | GRGCYC | 2 cut(s) | 140, 696 |
| Fsp4HI | GCNGC | 1 cut(s) | 210 |
| GlaI | GCGC | 2 cut(s) | 482, 578 |
| GluI | GCNGC | 1 cut(s) | 210 |
| HaeII | RGCGCY | 1 cut(s) | 580 |
| HaeIII | GGCC | 1 cut(s) | 584 |
| HapII | CCGG | 1 cut(s) | 409 |
| HhaI | GCGC | 2 cut(s) | 483, 579 |
| Hin1II | CATG | 3 cut(s) | 61, 466, 620 |
| Hin6I | GCGC | 2 cut(s) | 481, 577 |
| HinP1I | GCGC | 2 cut(s) | 481, 577 |
| HindIII | AAGCTT | 3 cut(s) | 120, 128, 662 |
| HinfI | GANTC | 5 cut(s) | 7, 254, 337, 515, 683 |
| HpaII | CCGG | 1 cut(s) | 409 |
| HphI | GGTGA | 1 cut(s) | 179 |
| Hpy166II | GTNNAC | 1 cut(s) | 565 |
| Hpy188I | TCNGA | 2 cut(s) | 238, 520 |
| Hpy188III | TCNNGA | 3 cut(s) | 141, 644, 713 |
| Hpy8I | GTNNAC | 1 cut(s) | 565 |
| Hpy99I | CGWCG | 2 cut(s) | 268, 321 |
| HpyAV | CCTTC | 1 cut(s) | 628 |
| HpyCH4III | ACNGT | 3 cut(s) | 17, 191, 571 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 13, 51, 233, 350, 367, 494, 544, 616 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 613, 637, 646 |
| HpyF3I | CTNAG | 3 cut(s) | 528, 676, 714 |
| Hsp92II | CATG | 3 cut(s) | 61, 466, 620 |
| HspAI | GCGC | 2 cut(s) | 481, 577 |
| LguI | GCTCTTC | 1 cut(s) | 80 |
| LmnI | GCTCC | 4 cut(s) | 143, 637, 646, 699 |
| LweI | GCATC | 1 cut(s) | 242 |
| MabI | ACCWGGT | 1 cut(s) | 487 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MbiI | CCGCTC | 1 cut(s) | 327 |
| MboII | GAAGA | 2 cut(s) | 97, 670 |
| MhlI | GDGCHC | 2 cut(s) | 140, 696 |
| MlsI | TGGCCA | 1 cut(s) | 584 |
| MluCI | AATT | 2 cut(s) | 241, 392 |
| MluNI | TGGCCA | 1 cut(s) | 584 |
| MlyI | GAGTC | 2 cut(s) | 331, 509 |
| MnlI | CCTC | 8 cut(s) | 46, 298, 370, 391, 414, 491, 597, 646 |
| Mox20I | TGGCCA | 1 cut(s) | 584 |
| Mph1103I | ATGCAT | 1 cut(s) | 235 |
| MscI | TGGCCA | 1 cut(s) | 584 |
| MslI | CAYNNNNRTG | 2 cut(s) | 265, 467 |
| Msp20I | TGGCCA | 1 cut(s) | 584 |
| MspI | CCGG | 1 cut(s) | 409 |
| MspR9I | CCNGG | 2 cut(s) | 489, 581 |
| MvaI | CCWGG | 2 cut(s) | 489, 581 |
| MvnI | CGCG | 1 cut(s) | 483 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 613, 637, 646 |
| NlaIII | CATG | 3 cut(s) | 61, 466, 620 |
| NsiI | ATGCAT | 1 cut(s) | 235 |
| NspI | RCATGY | 2 cut(s) | 466, 620 |
| PaeI | GCATGC | 2 cut(s) | 466, 620 |
| PciSI | GCTCTTC | 1 cut(s) | 80 |
| PfeI | GAWTC | 3 cut(s) | 7, 254, 683 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 627 |
| PkrI | GCNGC | 1 cut(s) | 211 |
| PleI | GAGTC | 2 cut(s) | 331, 509 |
| PpsI | GAGTC | 2 cut(s) | 331, 509 |
| Psp124BI | GAGCTC | 2 cut(s) | 140, 696 |
| Psp6I | CCWGG | 2 cut(s) | 487, 579 |
| PspGI | CCWGG | 2 cut(s) | 487, 579 |
| PstI | CTGCAG | 1 cut(s) | 352 |
| PstNI | CAGNNNCTG | 1 cut(s) | 10 |
| RseI | CAYNNNNRTG | 2 cut(s) | 265, 467 |
| SacI | GAGCTC | 2 cut(s) | 140, 696 |
| SapI | GCTCTTC | 1 cut(s) | 80 |
| SatI | GCNGC | 1 cut(s) | 210 |
| SchI | GAGTC | 2 cut(s) | 331, 509 |
| ScrFI | CCNGG | 2 cut(s) | 489, 581 |
| SduI | GDGCHC | 2 cut(s) | 140, 696 |
| SexAI | ACCWGGT | 1 cut(s) | 487 |
| SfaNI | GCATC | 1 cut(s) | 242 |
| SfcI | CTRYAG | 1 cut(s) | 348 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 265, 467 |
| SmlI | CTYRAG | 1 cut(s) | 509 |
| SmoI | CTYRAG | 1 cut(s) | 509 |
| SphI | GCATGC | 2 cut(s) | 466, 620 |
| Sse9I | AATT | 2 cut(s) | 241, 392 |
| SsiI | CCGC | 3 cut(s) | 209, 212, 327 |
| SstI | GAGCTC | 2 cut(s) | 140, 696 |
| StyD4I | CCNGG | 2 cut(s) | 487, 579 |
| StyI | CCWWGG | 2 cut(s) | 285, 585 |
| TaaI | ACNGT | 3 cut(s) | 17, 191, 571 |
| TaqI | TCGA | 1 cut(s) | 538 |
| TasI | AATT | 2 cut(s) | 241, 392 |
| TauI | GCSGC | 1 cut(s) | 212 |
| TfiI | GAWTC | 3 cut(s) | 7, 254, 683 |
| TscAI | CASTG | 2 cut(s) | 196, 574 |
| TspDTI | ATGAA | 1 cut(s) | 485 |
| TspRI | CASTG | 2 cut(s) | 196, 574 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 627 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 584 |
| XceI | RCATGY | 2 cut(s) | 466, 620 |
| Zsp2I | ATGCAT | 1 cut(s) | 235 |