Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000816

Physical Location & Seq

Genomic Coordinates Forward (+)

58797724 .. 58802106

Gene Structure 4383 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0462200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCGTTGAGTGAGGTTGAAGCTGAATTTCAACATGACTTATCTGAATCTGGTTTGAACAATCCAGCGAAGTACGGGGAAGCTGGAGAAGAACTACAGGTGGATGATGATGGCAAACTCAAAAGGACTGGAACGGTATGGACTGCCTGTGCCCATATAATCACAGCATCAATAGGAGCTGGAGTGCTATCTCTAGCCTGGGCAATGGCCCAACTCGGATGGCTTGCCGGCATTTTCATTCTCTTGTTCTGCACCTTCACTGCTGGCTACGCTTCCACTCTCTTAGCAGATTGTTACAGATTTCCGGACCCAGTGTCAGGCAAGAGAAACTACTCCTATATGGAGGCTGTCAAAGTCTATTTAGGTGGAACAATGCACAAGATTTGTGGATGGATGTTATATTTGAACCTTGCTACCATTGGAGTTGGCTTCACTATAACCACCGCAAAAAGCTTGGTGGCTATACAGAAGTCGAGTTGTCATCGCAAAAATGGTGAAGATTCTCCATGCATGTTTTCCAACATTCCACATATGGTTGGATTTGGGCTTGTTGAAATTCTCTTATCACAACTCCAAAACTTTCACAAGTTGACTTGGCTCTCTAAGCTTGCAGCCGTGATGTCTTTTGTCTATGCAACTATTGGAATTGGACTTTCTCTAGCTAAGATCATATCAGGGGATGGAGGAACAACATATGTTGCAGGGGCAGACCGGTCGTCATCGGAAAAAATTTGGATGATGTTTATAGCAGCCGGAGATATTGCATTTGCTTGCTCGTATTCTCTTATCCTGTTTGATATCCAAGACACACTGAAGTCATCGCCACCAGAGAACAAAGTGATGAAGAGGGCTGTCGTTATAGGGGGTTTGACTATGGCATTACTCTTCATGATGTGTGGTAGCTTGGGTTATGCCGCGTTTGGCAACATCACACCCGAAAACCTGCTTGCTGGTTTTGGAGATGAGATGCCCTGGGCATTCTGGCTCCTGGATTTGGCTAATTTTTGCATTGTGGTGCACATAGTTGGTGCATTTCAGGTACTGTGCCAACCAGTGTTTCGCATTGTCGAACTGTTGGCTAGAAGAAGGTGGCCAAAATCCAATTTCATTACCAAAGAGAACCCGGTCATACTAGGGAAGATGAAGTTCAATATAAACATGTTTAGGCTGACATGGAGAACATCCTTTGTGGTGTTGGTGACTGTCATTGCCATGGCAATGCCATTCTTCACAGATATGCTGGCGCTTCTCGGTGCTATCGGGTACTGGCCTCTTATAGTTTATGTCCCAATAGAGATGCACATTGTGCAAAACAAGATTCAGAAACAAACCCTTCGCTGGTTCGGGCTCCAACTCCTGAGCTTTTTGTGCTTGCTTCTTTCCTTGGCCGCGACATCTGGTTCCATTTATGGTCTGCATAAGGGTCTCGGTGCGTACAAGCTCTTCCAAGTTAAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000038 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0006643 GO:0006665 GO:0006672 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016053 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0030148 GO:0032787 GO:0034641 GO:0042761 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046467 GO:0046513 GO:0050291 GO:0071704 GO:0072330 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 ko04071 map00600 map01100 map04071

Pfam Domains

Protein Families

TRAM_LAG1_CLN8

Protein Analysis

486

Amino Acids

53.48

Weight (kDa)

8.52

Isoelectric Point (pI)

46.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aa_trans	PF01490	42 - 472	7.4e-101	Transmembrane amino acid transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13580 AT1G13580 AT1G13580 AT3G25540 AT3G25540 AT3G25540
fragaria_vesca	FvH4_4g28710 FvH4_4g28710 FvH4_4g28710 FvH4_4g28710 FvH4_4g28710 FvH4_4g28710 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070 FvH4_5g13070
malus_domestica	MD06G1207300.v1.1 MD13G1053200.v1.1 MD14G1217800.v1.1 MD16G1052200.v1.1
prunus_persica	Prupe.1G298900_v2.0.a1 Prupe.5G211700_v2.0.a1
pyrus_communis	pycom06g18520 pycom13g04760 pycom14g18060 pycom16g04580
rosa_chinensis	RchiOBHm_Chr4g0436831 RchiOBHm_Chr7g0184061
rosa_laevigata	RLG00000005004 RLG00000006493
rosa_multiflora	Rmu_sc0001837.1_g000015 Rmu_sc0004712.1_g000010 Rmu_sc0025350.1_g000014
rosa_roxburghii	Rroxscaffold_2G00110680 Rroxscaffold_3G00269920 Rroxscaffold_5G00377880
rosa_rugosa	Rorug04G0296500 Rorug04G0296500 Rorug06G0461800 Rorug06G0461900 Rorug06G0462000 Rorug06G0462100 Rorug06G0462200 Rorug06G0462300 Rorug06G0462400 Rorug06G0462400
rosa_samantha	Rh2AG465300 Rh2CG361300 Rh2CG451700 Rh4BG359900 Rh4CG374200 Rh4DG353900 Rh6CG248500 Rh6DG208700 Rh7BG063800 Rh7CG064500 Rh7DG064000
rosa_wichuraiana	Rw4G030710 Rw7G005240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	951
AccII	CGCG	2 cut(s)	917, 1391
AccIII	TCCGGA	1 cut(s)	304
AciI	CCGC	3 cut(s)	444, 915, 1389
AcoI	YGGCCR	2 cut(s)	1091, 1386
AcsI	RAATTY	3 cut(s)	26, 555, 729
AcuI	CTGAAG	1 cut(s)	833
AdeI	CACNNNGTG	1 cut(s)	1306
AfaI	GTAC	4 cut(s)	74, 1041, 1265, 1436
AfiI	CCNNNNNNNGG	3 cut(s)	317, 994, 1338
AflIII	ACRYGT	1 cut(s)	1158
AgeI	ACCGGT	1 cut(s)	711
AgsI	TTSAA	6 cut(s)	20, 32, 58, 406, 554, 1150
AhdI	GACNNNNNGTC	2 cut(s)	313, 715
AjnI	CCWGG	3 cut(s)	197, 971, 987
AjuI	GAANNNNNNNTTGG	2 cut(s)	1041, 1073
AluBI	AGCT	9 cut(s)	23, 83, 179, 453, 607, 662, 903, 1362, 1441
AluI	AGCT	9 cut(s)	23, 83, 179, 453, 607, 662, 903, 1362, 1441
Alw21I	GWGCWC	1 cut(s)	1020
Alw26I	GTCTC	1 cut(s)	1430
Alw44I	GTGCAC	1 cut(s)	1016
AlwNI	CAGNNNCTG	1 cut(s)	1042
Aor13HI	TCCGGA	1 cut(s)	304
AoxI	GGCC	4 cut(s)	207, 1091, 1268, 1386
ApaLI	GTGCAC	1 cut(s)	1016
ApeKI	GCWGC	2 cut(s)	611, 749
ApoI	RAATTY	3 cut(s)	26, 555, 729
AsiGI	ACCGGT	1 cut(s)	711
AspLEI	GCGC	1 cut(s)	1246
AspS9I	GGNCC	2 cut(s)	208, 307
AsuC2I	CCSGG	1 cut(s)	1124
AsuHPI	GGTGA	2 cut(s)	506, 1210
AvaII	GGWCC	1 cut(s)	307
BaeGI	GKGCMC	2 cut(s)	154, 1020
BalI	TGGCCA	1 cut(s)	1093
BanII	GRGCYC	1 cut(s)	1350
BarI	GAAGNNNNNNTAC	2 cut(s)	1427, 1459
Bbv12I	GWGCWC	1 cut(s)	1020
BbvI	GCAGC	2 cut(s)	623, 761
BccI	CCATC	4 cut(s)	104, 213, 384, 674
BceAI	ACGGC	1 cut(s)	599
BcgI	CGANNNNNNTGC	2 cut(s)	696, 730
BciT130I	CCWGG	3 cut(s)	199, 973, 989
BcnI	CCSGG	1 cut(s)	1124
BcoDI	GTCTC	1 cut(s)	1430
BfaI	CTAG	4 cut(s)	194, 659, 1080, 1133
BfmI	CTRYAG	1 cut(s)	95
BfoI	RGCGCY	1 cut(s)	1247
BfuAI	ACCTGC	1 cut(s)	951
BisI	GCNGC	4 cut(s)	612, 750, 915, 1389
BlsI	GCNGC	4 cut(s)	613, 751, 916, 1390
Bme1390I	CCNGG	4 cut(s)	199, 973, 989, 1124
Bme18I	GGWCC	1 cut(s)	307
BmeRI	GACNNNNNGTC	2 cut(s)	313, 715
BmgT120I	GGNCC	2 cut(s)	208, 307
BmiI	GGNNCC	4 cut(s)	309, 986, 1349, 1402
BmrFI	CCNGG	4 cut(s)	199, 973, 989, 1124
BmrI	ACTGGG	1 cut(s)	305
BmsI	GCATC	3 cut(s)	176, 957, 1287
BmuI	ACTGGG	1 cut(s)	305
BpmI	CTGGAG	2 cut(s)	105, 201
Bpu10I	CCTNAGC	1 cut(s)	1358
BpuMI	CCSGG	1 cut(s)	1124
BsaI	GGTCTC	1 cut(s)	1430
BsaJI	CCNNGG	5 cut(s)	198, 971, 972, 1212, 1383
BsaWI	WCCGGW	2 cut(s)	304, 711
BsaXI	ACNNNNNCTCC	2 cut(s)	168, 198
Bsc4I	CCNNNNNNNGG	3 cut(s)	317, 994, 1338
Bse118I	RCCGGY	2 cut(s)	227, 711
Bse1I	ACTGG	4 cut(s)	133, 311, 1052, 1271
Bse3DI	GCAATG	3 cut(s)	210, 1206, 1224
BseAI	TCCGGA	1 cut(s)	304
BseBI	CCWGG	3 cut(s)	199, 973, 989
BseDI	CCNNGG	5 cut(s)	198, 971, 972, 1212, 1383
BseGI	GGATG	7 cut(s)	109, 224, 395, 399, 685, 741, 1181
BseLI	CCNNNNNNNGG	3 cut(s)	317, 994, 1338
BseMI	GCAATG	3 cut(s)	210, 1206, 1224
BseMII	CTCAG	1 cut(s)	1349
BseNI	ACTGG	4 cut(s)	133, 311, 1052, 1271
BseSI	GKGCMC	2 cut(s)	154, 1020
BseXI	GCAGC	2 cut(s)	623, 761
BsgI	GTGCAG	1 cut(s)	235
Bsh1236I	CGCG	2 cut(s)	917, 1391
Bsh1285I	CGRYCG	1 cut(s)	716
BshFI	GGCC	4 cut(s)	209, 1093, 1270, 1388
BshTI	ACCGGT	1 cut(s)	711
BsiEI	CGRYCG	1 cut(s)	716
BsiHKAI	GWGCWC	1 cut(s)	1020
BsiSI	CCGG	5 cut(s)	228, 305, 712, 753, 1124
BslFI	GGGAC	1 cut(s)	1271
BslI	CCNNNNNNNGG	3 cut(s)	317, 994, 1338
BsmAI	GTCTC	1 cut(s)	1430
BsmFI	GGGAC	1 cut(s)	1271
BsmI	GAATGC	1 cut(s)	977
BsnI	GGCC	4 cut(s)	209, 1093, 1270, 1388
Bso31I	GGTCTC	1 cut(s)	1430
Bsp1286I	GDGCHC	3 cut(s)	154, 1020, 1350
Bsp13I	TCCGGA	1 cut(s)	304
Bsp143I	GATC	1 cut(s)	666
Bsp19I	CCATGG	1 cut(s)	1212
BspACI	CCGC	3 cut(s)	444, 915, 1389
BspANI	GGCC	4 cut(s)	209, 1093, 1270, 1388
BspCNI	CTCAG	1 cut(s)	1350
BspEI	TCCGGA	1 cut(s)	304
BspFNI	CGCG	2 cut(s)	917, 1391
BspHI	TCATGA	1 cut(s)	888
BspLI	GGNNCC	4 cut(s)	309, 986, 1349, 1402
BspMI	ACCTGC	1 cut(s)	951
BspQI	GCTCTTC	1 cut(s)	1448
BspTNI	GGTCTC	1 cut(s)	1430
BsrDI	GCAATG	3 cut(s)	210, 1206, 1224
BsrFI	RCCGGY	2 cut(s)	227, 711
BsrI	ACTGG	4 cut(s)	133, 311, 1052, 1271
BssAI	RCCGGY	2 cut(s)	227, 711
BssECI	CCNNGG	5 cut(s)	198, 971, 972, 1212, 1383
BssMI	GATC	1 cut(s)	666
BssT1I	CCWWGG	2 cut(s)	1212, 1383
Bst2UI	CCWGG	3 cut(s)	199, 973, 989
Bst4CI	ACNGT	4 cut(s)	136, 1044, 1074, 1204
Bst6I	CTCTTC	3 cut(s)	839, 890, 1448
BstAPI	GCANNNNNTGC	1 cut(s)	1306
BstC8I	GCNNGC	8 cut(s)	225, 229, 265, 609, 772, 948, 1242, 1373
BstDEI	CTNAG	4 cut(s)	283, 603, 663, 1358
BstDSI	CCRYGG	1 cut(s)	1212
BstF5I	GGATG	7 cut(s)	109, 224, 395, 399, 685, 741, 1181
BstFNI	CGCG	2 cut(s)	917, 1391
BstH2I	RGCGCY	1 cut(s)	1247
BstHHI	GCGC	1 cut(s)	1246
BstKTI	GATC	1 cut(s)	669
BstMAI	GTCTC	1 cut(s)	1430
BstMBI	GATC	1 cut(s)	666
BstMCI	CGRYCG	1 cut(s)	716
BstMWI	GCNNNNNNNGC	4 cut(s)	269, 604, 1306, 1368
BstNI	CCWGG	3 cut(s)	199, 973, 989
BstNSI	RCATGY	2 cut(s)	514, 1162
BstSCI	CCNGG	4 cut(s)	197, 971, 987, 1122
BstSFI	CTRYAG	1 cut(s)	95
BstSLI	GKGCMC	2 cut(s)	154, 1020
BstUI	CGCG	2 cut(s)	917, 1391
BstV1I	GCAGC	2 cut(s)	623, 761
BsuRI	GGCC	4 cut(s)	209, 1093, 1270, 1388
BtgI	CCRYGG	1 cut(s)	1212
BtgZI	GCGATG	2 cut(s)	467, 804
BtsCI	GGATG	7 cut(s)	109, 224, 395, 399, 685, 741, 1181
BtsI	GCAGTG	1 cut(s)	258
BtsIMutI	CAGTG	4 cut(s)	258, 318, 809, 1059
BveI	ACCTGC	1 cut(s)	951
Cac8I	GCNNGC	8 cut(s)	225, 229, 265, 609, 772, 948, 1242, 1373
CaiI	CAGNNNCTG	1 cut(s)	1042
CciI	TCATGA	1 cut(s)	888
CfoI	GCGC	1 cut(s)	1246
Cfr10I	RCCGGY	2 cut(s)	227, 711
Cfr13I	GGNCC	2 cut(s)	208, 307
Csp6I	GTAC	4 cut(s)	73, 1040, 1264, 1435
CspAI	ACCGGT	1 cut(s)	711
CspCI	CAANNNNNGTGG	2 cut(s)	367, 402
CviAII	CATG	7 cut(s)	35, 507, 511, 889, 1159, 1173, 1213
CviQI	GTAC	4 cut(s)	73, 1040, 1264, 1435
DdeI	CTNAG	4 cut(s)	283, 603, 663, 1358
DpnI	GATC	1 cut(s)	668
DpnII	GATC	1 cut(s)	666
DraIII	CACNNNGTG	1 cut(s)	1306
DriI	GACNNNNNGTC	2 cut(s)	313, 715
EaeI	YGGCCR	2 cut(s)	1091, 1386
Eam1104I	CTCTTC	3 cut(s)	839, 890, 1448
Eam1105I	GACNNNNNGTC	2 cut(s)	313, 715
EarI	CTCTTC	3 cut(s)	839, 890, 1448
Eco130I	CCWWGG	2 cut(s)	1212, 1383
Eco24I	GRGCYC	1 cut(s)	1350
Eco31I	GGTCTC	1 cut(s)	1430
Eco32I	GATATC	1 cut(s)	799
Eco47I	GGWCC	1 cut(s)	307
Eco57I	CTGAAG	1 cut(s)	833
EcoRII	CCWGG	3 cut(s)	197, 971, 987
EcoRV	GATATC	1 cut(s)	799
EcoT14I	CCWWGG	2 cut(s)	1212, 1383
EcoT22I	ATGCAT	1 cut(s)	512
EcoT38I	GRGCYC	1 cut(s)	1350
ErhI	CCWWGG	2 cut(s)	1212, 1383
FaeI	CATG	7 cut(s)	38, 510, 514, 892, 1162, 1176, 1216
FaqI	GGGAC	1 cut(s)	1271
FatI	CATG	7 cut(s)	34, 506, 510, 888, 1158, 1172, 1212
FauNDI	CATATG	2 cut(s)	531, 694
Fnu4HI	GCNGC	4 cut(s)	612, 750, 915, 1389
FokI	GGATG	7 cut(s)	116, 231, 402, 406, 692, 748, 1168
FriOI	GRGCYC	1 cut(s)	1350
Fsp4HI	GCNGC	4 cut(s)	612, 750, 915, 1389
FspBI	CTAG	4 cut(s)	194, 659, 1080, 1133
GlaI	GCGC	1 cut(s)	1245
GluI	GCNGC	4 cut(s)	612, 750, 915, 1389
GsuI	CTGGAG	2 cut(s)	105, 201
HaeII	RGCGCY	1 cut(s)	1247
HaeIII	GGCC	4 cut(s)	209, 1093, 1270, 1388
HapII	CCGG	5 cut(s)	228, 305, 712, 753, 1124
HhaI	GCGC	1 cut(s)	1246
Hin1II	CATG	7 cut(s)	38, 510, 514, 892, 1162, 1176, 1216
Hin6I	GCGC	1 cut(s)	1244
HinP1I	GCGC	1 cut(s)	1244
HincII	GTYRAC	1 cut(s)	591
HindII	GTYRAC	1 cut(s)	591
HindIII	AAGCTT	2 cut(s)	451, 605
HinfI	GANTC	3 cut(s)	47, 500, 1318
HpaII	CCGG	5 cut(s)	228, 305, 712, 753, 1124
HphI	GGTGA	2 cut(s)	506, 1210
Hpy166II	GTNNAC	2 cut(s)	591, 1018
Hpy188I	TCNGA	4 cut(s)	46, 218, 724, 1323
Hpy188III	TCNNGA	3 cut(s)	305, 889, 1357
Hpy8I	GTNNAC	2 cut(s)	591, 1018
HpyAV	CCTTC	3 cut(s)	265, 1080, 1343
HpyCH4III	ACNGT	4 cut(s)	136, 1044, 1074, 1204
HpyF10VI	GCNNNNNNNGC	4 cut(s)	269, 604, 1306, 1368
HpyF3I	CTNAG	4 cut(s)	283, 603, 663, 1358
Hsp92II	CATG	7 cut(s)	38, 510, 514, 892, 1162, 1176, 1216
HspAI	GCGC	1 cut(s)	1244
Kpn2I	TCCGGA	1 cut(s)	304
KroI	GCCGGC	1 cut(s)	227
KroNI	GCCGGC	1 cut(s)	229
Kzo9I	GATC	1 cut(s)	666
LguI	GCTCTTC	1 cut(s)	1448
LmnI	GCTCC	3 cut(s)	176, 990, 1353
Lsp1109I	GCAGC	2 cut(s)	623, 761
LweI	GCATC	3 cut(s)	176, 957, 1287
MaeI	CTAG	4 cut(s)	194, 659, 1080, 1133
MaeIII	GTNAC	2 cut(s)	293, 1198
MalI	GATC	1 cut(s)	668
MboI	GATC	1 cut(s)	666
MboII	GAAGA	8 cut(s)	101, 509, 856, 877, 1095, 1150, 1219, 1435
MhlI	GDGCHC	3 cut(s)	154, 1020, 1350
MlsI	TGGCCA	1 cut(s)	1093
MluCI	AATT	6 cut(s)	26, 555, 645, 729, 1000, 1102
MluNI	TGGCCA	1 cut(s)	1093
MmeI	TCCRAC	3 cut(s)	517, 543, 1375
MnlI	CCTC	5 cut(s)	7, 337, 677, 840, 1281
Mox20I	TGGCCA	1 cut(s)	1093
Mph1103I	ATGCAT	1 cut(s)	512
MroI	TCCGGA	1 cut(s)	304
MroNI	GCCGGC	1 cut(s)	227
MscI	TGGCCA	1 cut(s)	1093
MseI	TTAA	1 cut(s)	1452
MslI	CAYNNNNRTG	4 cut(s)	1013, 1211, 1217, 1235
Msp20I	TGGCCA	1 cut(s)	1093
MspI	CCGG	5 cut(s)	228, 305, 712, 753, 1124
MspR9I	CCNGG	4 cut(s)	199, 973, 989, 1124
Mva1269I	GAATGC	1 cut(s)	977
MvaI	CCWGG	3 cut(s)	199, 973, 989
MvnI	CGCG	2 cut(s)	917, 1391
MwoI	GCNNNNNNNGC	4 cut(s)	269, 604, 1306, 1368
NaeI	GCCGGC	1 cut(s)	229
NciI	CCSGG	1 cut(s)	1124
NcoI	CCATGG	1 cut(s)	1212
NdeI	CATATG	2 cut(s)	531, 694
NdeII	GATC	1 cut(s)	666
NgoMIV	GCCGGC	1 cut(s)	227
NlaIII	CATG	7 cut(s)	38, 510, 514, 892, 1162, 1176, 1216
NlaIV	GGNNCC	4 cut(s)	309, 986, 1349, 1402
NmuCI	GTSAC	1 cut(s)	1198
NsiI	ATGCAT	1 cut(s)	512
NspI	RCATGY	2 cut(s)	514, 1162
PagI	TCATGA	1 cut(s)	888
PasI	CCCWGGG	1 cut(s)	972
PciI	ACATGT	1 cut(s)	1158
PciSI	GCTCTTC	1 cut(s)	1448
PctI	GAATGC	1 cut(s)	977
PdiI	GCCGGC	1 cut(s)	229
PfeI	GAWTC	3 cut(s)	47, 500, 1318
PfoI	TCCNGGA	1 cut(s)	987
PinAI	ACCGGT	1 cut(s)	711
PkrI	GCNGC	4 cut(s)	613, 751, 916, 1390
PscI	ACATGT	1 cut(s)	1158
Psp6I	CCWGG	3 cut(s)	197, 971, 987
PspGI	CCWGG	3 cut(s)	197, 971, 987
PspN4I	GGNNCC	4 cut(s)	309, 986, 1349, 1402
PspPI	GGNCC	2 cut(s)	208, 307
PstNI	CAGNNNCTG	1 cut(s)	1042
RsaI	GTAC	4 cut(s)	74, 1041, 1265, 1436
RsaNI	GTAC	4 cut(s)	73, 1040, 1264, 1435
RseI	CAYNNNNRTG	4 cut(s)	1013, 1211, 1217, 1235
SapI	GCTCTTC	1 cut(s)	1448
SaqAI	TTAA	1 cut(s)	1452
SatI	GCNGC	4 cut(s)	612, 750, 915, 1389
Sau3AI	GATC	1 cut(s)	666
Sau96I	GGNCC	2 cut(s)	208, 307
ScrFI	CCNGG	4 cut(s)	199, 973, 989, 1124
SduI	GDGCHC	3 cut(s)	154, 1020, 1350
SfaNI	GCATC	3 cut(s)	176, 957, 1287
SfcI	CTRYAG	1 cut(s)	95
SinI	GGWCC	1 cut(s)	307
SmiMI	CAYNNNNRTG	4 cut(s)	1013, 1211, 1217, 1235
Sse9I	AATT	6 cut(s)	26, 555, 645, 729, 1000, 1102
SsiI	CCGC	3 cut(s)	444, 915, 1389
SspMI	CTAG	4 cut(s)	194, 659, 1080, 1133
StyD4I	CCNGG	4 cut(s)	197, 971, 987, 1122
StyI	CCWWGG	2 cut(s)	1212, 1383
TaaI	ACNGT	4 cut(s)	136, 1044, 1074, 1204
TaqI	TCGA	2 cut(s)	473, 1068
TasI	AATT	6 cut(s)	26, 555, 645, 729, 1000, 1102
TauI	GCSGC	2 cut(s)	917, 1391
TfiI	GAWTC	3 cut(s)	47, 500, 1318
Tru1I	TTAA	1 cut(s)	1452
Tru9I	TTAA	1 cut(s)	1452
TscAI	CASTG	4 cut(s)	265, 318, 816, 1059
TseFI	GTSAC	1 cut(s)	1198
TseI	GCWGC	2 cut(s)	611, 749
Tsp45I	GTSAC	1 cut(s)	1198
TspDTI	ATGAA	5 cut(s)	226, 857, 877, 1096, 1157
TspRI	CASTG	4 cut(s)	265, 318, 816, 1059
VneI	GTGCAC	1 cut(s)	1016
VpaK11BI	GGWCC	1 cut(s)	307
XapI	RAATTY	3 cut(s)	26, 555, 729
XceI	RCATGY	2 cut(s)	514, 1162
XspI	CTAG	4 cut(s)	194, 659, 1080, 1133
Zsp2I	ATGCAT	1 cut(s)	512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.