Rorug07G0186700

Survival of motor neuron-related-splicing factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0002626
Physical Location & Seq
Forward (+)
15721721 .. 15726518
4798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0186700.1

Sequence Viewer

Length: 2304 bp
ATGGCGGCTACTAACACCACCACGCAGACGGTGGCCGTGGGGATGGAACTCGCGGTGGACACGTCGTCGCCGTCGCCGGACGACGCGGCGGCCAAGGCCGTGACGAAACGCTACGAGGGGCTGGTGACGGTGAGGACCAAGGCCATAAAGGGCAAAGGGGCTTGGTACTGGGCCCACCTAGAGCCCATTCTGGTTCACAACACCGACACCGGGCTACCCAAGGCCGTGAAGCTCCGCTGCGCTCTCTGCGAGGCCATTTTCTCGGCGTCGAACCCGTCGCGCACGGCGTCGGAGCACCTGAAGCGCGGGACTTGCCCCAATTTCAGCTCCGCATCCAAACCCATTTCGTCTCCGTCGCCAATATCGACTTCTTTGCCCAACTCCGCTCCGCCGCCGCCGCCGTCCCACCACAACCCCCGGAAGCGGAGCTCCTCCTCGGCGGCGGCCTCCGGGAGCGCCCCGACGCCGTCGTACAGCGTTCCGCCGCAGGGGATAGTCGATCCGACGCGGTTCTGCGGCGGCGAGCTGACGTACGCTTCGGCGGTGACGACGACGGTGCTGACTCAGCAGCCGCATTTGATGTTGTCCGGCGGGAAAGACGATTTGGGAGCTCTGGCGATGCTGGAGGACAGTGTGAAGAAGCTCAAGAGTCCCAAAACCTCACCTGGCCCGACGCTGTGTAAGAGCCAAGTCGATTGTGCGCTTGATTTTCTTGCTGATTGGGTCTACGAGTCTTGTGGGTCGGTCTCATTTTCGAGCCTGGAGCACCCCAAGTTCCGAGCTTTTCTTAACCAGGTGGGCTTGCCGGCGATTTCCCGGAGGGAGTTCACCGGGTCGAGGTTGGATGCTAAGTTTGAGGAAGCAAAGGCCGAGTCGGAGGCCAGAATTAGAGACGCTATGTTCTTCCAGATTGCCTCTGATGGATGGAAGTCCAAGAATGCTGGGGGTTTAGGTGAGGATAGTCTTGTCAATTTGACTGTGAATCTTCCCAATGGGACTAGTGTGTACCGGAGGGCGGTGTTTGTTGGCGGCTCTGTGCCGTGGAAGTACGCCGAGGAGGTTCTGTGGGAGACGATTACAAGCATTTGTGGGAATGCTGTGCAACAATGTGTAGGAATAGTAGCGGACAGGTTTAGGATCAAGGCATTGAGAAATTTAGAGAGTCAGAATCACTGGATGGTTAATCTATCTTGTCAGTTTCAGGGTTTTACTAGTTTGATTAAGGATTTCAGTAAGGAGCTTCGGTTGTTCAGGGCTGTTACTGAAAACTGTTACAAGCTCGCGAGTTTTGTGAATAACAAGTCTCAGGTTAGGATTAGCTTTCAGAGGTATCAATCCCAGGAGGGTGGTTATGCTGGTTTATTACGAGTGCCATCGATGCGCGATTATGAAATGCTCAACTTTGGTCCAGTGTATGTAATGGTTGAGGATATTCTTAGCTCCGCGCGAGCACTTCAGTTGGTCGTGCTAGATGAATCTTATAAAGGGGTATCAATGGAGGACCAAACGGCAAGAGAAGTTGCTGAGATGATTGGGGACGTGGCGTTTTGGAATGAATTGGAGGCGGTGCATTCTTTGGTTAAACTTATCAAGGACATGGCTCAAGAGATTGAGATAGAGAGGCCACTGGTTGGGAAATGCCTCCCACTTTGGGATGAATTAAGAGCAAAAGTGAAGGATTGGTGTTCAAGTTTCCACATTGATCAAGGTCCCGTGGAGAAGGTAATCGAAAAGCGGTTCAAGAAGAATTACCATCCAGCTTGGGCTGCTGCATTTATACTCGATCCAGTTTATTTGATTAAGGACATAAGTGGAAAGTATCTTCCACCATTCAAATTGTTGACGCCGGAGCAAGAGAAGGATGTGGACAAGCTCATAACCCGGCTTGTATCAAGGGAGGAGGCTCACATTGCACTAATGGAACTCATGAAGTGGAGAACAGAAGGGCTTGATCCCGTATATGCTCGCGCTGTACAAATGAAGGAGAAGGATCCCGTTTCAGGCAAGATGAGAATTACTAACCCACAAAGCAGTAGACTTGTGTGGGAAACATACCTCACTGAATTTAAGTCACTAGGGAAAGTTGCAGTTAGGCTCATTTTCCTTCATGCAACTTCATGTGGGTTCAAATCCAGTTGGTCTTTAATGAGGTGGGTGTCTGCAAATGGGCACTCAAGGGTGAGCATGGACAAGGCACAGAAGTTGATCTTCATTGCAGCTCATTCCAAGCTTGAAAGACGGGATTTTTCCTGTGATGAAGATAAGGACGCAGAGCTACTTGCCCTAGTAAACGGGTTTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
SMN

Protein Analysis

767

Amino Acids

84.99

Weight (kDa)

8.6

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7963 PF25908 27 - 109 8.5e-47 Domain of unknown function (DUF7963)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1482
AccB7I CCANNNNNTGG 1 cut(s) 1631
AccBSI CCGCTC 1 cut(s) 386
AccI GTMKAC 2 cut(s) 726, 2035
AclWI GGATC 6 cut(s) 494, 1145, 1778, 1946, 1985, 1998
AcoI YGGCCR 2 cut(s) 33, 90
AcsI RAATTY 2 cut(s) 1153, 2063
AcuI CTGAAG 2 cut(s) 320, 1439
AcyI GRCGYC 4 cut(s) 266, 287, 464, 1844
AfaI GTAC 6 cut(s) 167, 473, 533, 1007, 1049, 1974
AfiI CCNNNNNNNGG 8 cut(s) 210, 423, 488, 837, 1015, 1631, 1651, 2000
AflIII ACRYGT 1 cut(s) 60
AgsI TTSAA 5 cut(s) 1689, 1741, 1834, 2128, 2234
AhdI GACNNNNNGTC 1 cut(s) 64
AhlI ACTAGT 2 cut(s) 998, 1211
AjiI CACGTC 2 cut(s) 63, 1540
AjnI CCWGG 4 cut(s) 664, 759, 792, 1338
AjuI GAANNNNNNNTTGG 4 cut(s) 352, 384, 587, 619
Alw21I GWGCWC 5 cut(s) 297, 431, 613, 768, 1453
Alw26I GTCTC 5 cut(s) 354, 751, 885, 1064, 1308
AlwI GGATC 6 cut(s) 494, 1145, 1778, 1946, 1985, 1998
ApaI GGGCCC 1 cut(s) 175
ApeKI GCWGC 5 cut(s) 237, 568, 1766, 1769, 2216
ApoI RAATTY 2 cut(s) 1153, 2063
ArsI GACNNNNNNTTYG 4 cut(s) 520, 552, 857, 889
AspLEI GCGC 8 cut(s) 242, 282, 306, 458, 703, 1383, 1447, 1970
AspS9I GGNCC 7 cut(s) 135, 171, 172, 668, 1406, 1501, 1709
AsuC2I CCSGG 6 cut(s) 211, 418, 451, 817, 832, 1882
AsuHPI GGTGA 7 cut(s) 136, 142, 556, 654, 820, 965, 2191
AvaII GGWCC 4 cut(s) 135, 1406, 1501, 1709
BaeGI GKGCMC 2 cut(s) 175, 2172
BamHI GGATCC 1 cut(s) 1990
BanII GRGCYC 4 cut(s) 175, 186, 431, 613
Bbv12I GWGCWC 5 cut(s) 297, 431, 613, 768, 1453
BbvI GCAGC 5 cut(s) 224, 580, 1753, 1756, 2228
BccI CCATC 6 cut(s) 37, 914, 918, 1171, 1381, 1761
BceAI ACGGC 9 cut(s) 20, 55, 83, 209, 300, 385, 451, 1024, 1524
BcgI CGANNNNNNTGC 4 cut(s) 355, 389, 538, 572
BciT130I CCWGG 4 cut(s) 666, 761, 794, 1340
BclI TGATCA 1 cut(s) 1702
BcnI CCSGG 6 cut(s) 211, 418, 451, 817, 832, 1882
BcoDI GTCTC 5 cut(s) 354, 751, 885, 1064, 1308
BcuI ACTAGT 2 cut(s) 998, 1211
BfaI CTAG 6 cut(s) 179, 999, 1212, 1469, 2075, 2285
BfoI RGCGCY 1 cut(s) 459
Bme18I GGWCC 4 cut(s) 135, 1406, 1501, 1709
BmeRI GACNNNNNGTC 1 cut(s) 64
BmgBI CACGTC 2 cut(s) 63, 1540
BmgT120I GGNCC 7 cut(s) 135, 171, 172, 668, 1406, 1501, 1709
BmiI GGNNCC 3 cut(s) 173, 1711, 1992
BmrI ACTGGG 1 cut(s) 178
BmsI GCATC 4 cut(s) 341, 609, 835, 1368
BmuI ACTGGG 1 cut(s) 178
BpmI CTGGAG 2 cut(s) 644, 782
BpuEI CTTGAG 3 cut(s) 629, 1587, 2158
BpuMI CCSGG 6 cut(s) 211, 418, 451, 817, 832, 1882
Bsa29I ATCGAT 1 cut(s) 1376
BsaHI GRCGYC 4 cut(s) 266, 287, 464, 1844
BsaI GGTCTC 1 cut(s) 751
BsaWI WCCGGW 1 cut(s) 1008
BsaXI ACNNNNNCTCC 4 cut(s) 1049, 1079, 1229, 1259
Bsc4I CCNNNNNNNGG 8 cut(s) 210, 423, 488, 837, 1015, 1631, 1651, 2000
Bse118I RCCGGY 1 cut(s) 805
Bse1I ACTGG 6 cut(s) 173, 1178, 1409, 1632, 1787, 2133
Bse3DI GCAATG 2 cut(s) 1908, 2211
BseBI CCWGG 4 cut(s) 666, 761, 794, 1340
BseCI ATCGAT 1 cut(s) 1376
BseGI GGATG 8 cut(s) 48, 332, 850, 929, 1182, 1660, 1753, 1867
BseLI CCNNNNNNNGG 8 cut(s) 210, 423, 488, 837, 1015, 1631, 1651, 2000
BseMI GCAATG 2 cut(s) 1908, 2211
BseMII CTCAG 3 cut(s) 578, 1319, 1515
BseNI ACTGG 6 cut(s) 173, 1178, 1409, 1632, 1787, 2133
BseRI GAGGAG 4 cut(s) 421, 424, 1070, 1913
BseSI GKGCMC 2 cut(s) 175, 2172
BseXI GCAGC 5 cut(s) 224, 580, 1753, 1756, 2228
BseYI CCCAGC 1 cut(s) 941
BshVI ATCGAT 1 cut(s) 1376
BsiHKAI GWGCWC 5 cut(s) 297, 431, 613, 768, 1453
BsiWI CGTACG 1 cut(s) 531
BslFI GGGAC 6 cut(s) 322, 388, 636, 1009, 1550, 1695
BslI CCNNNNNNNGG 8 cut(s) 210, 423, 488, 837, 1015, 1631, 1651, 2000
BsmAI GTCTC 5 cut(s) 354, 751, 885, 1064, 1308
BsmBI CGTCTC 3 cut(s) 354, 885, 1064
BsmFI GGGAC 6 cut(s) 322, 388, 636, 1009, 1550, 1695
BsmI GAATGC 3 cut(s) 943, 1099, 1570
Bso31I GGTCTC 1 cut(s) 751
Bsp120I GGGCCC 1 cut(s) 171
Bsp1286I GDGCHC 8 cut(s) 175, 186, 297, 431, 613, 768, 1453, 2172
Bsp1407I TGTACA 1 cut(s) 1972
Bsp143I GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
Bsp68I TCGCGA 1 cut(s) 1283
BspCNI CTCAG 3 cut(s) 577, 1318, 1516
BspDI ATCGAT 1 cut(s) 1376
BspHI TCATGA 1 cut(s) 1926
BspLI GGNNCC 3 cut(s) 173, 1711, 1992
BspPI GGATC 6 cut(s) 494, 1145, 1778, 1946, 1985, 1998
BspTNI GGTCTC 1 cut(s) 751
BsrBI CCGCTC 1 cut(s) 386
BsrDI GCAATG 2 cut(s) 1908, 2211
BsrFI RCCGGY 1 cut(s) 805
BsrGI TGTACA 1 cut(s) 1972
BsrI ACTGG 6 cut(s) 173, 1178, 1409, 1632, 1787, 2133
BssAI RCCGGY 1 cut(s) 805
BssMI GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
BssNI GRCGYC 4 cut(s) 266, 287, 464, 1844
BssT1I CCWWGG 3 cut(s) 93, 138, 219
Bst2UI CCWGG 4 cut(s) 666, 761, 794, 1340
Bst4CI ACNGT 6 cut(s) 31, 130, 556, 632, 979, 1271
BstACI GRCGYC 4 cut(s) 266, 287, 464, 1844
BstAUI TGTACA 1 cut(s) 1972
BstC8I GCNNGC 6 cut(s) 524, 803, 807, 1281, 1449, 1966
BstDEI CTNAG 5 cut(s) 564, 849, 1305, 1436, 1524
BstDSI CCRYGG 3 cut(s) 36, 1040, 1713
BstF5I GGATG 8 cut(s) 48, 332, 850, 929, 1182, 1660, 1753, 1867
BstH2I RGCGCY 1 cut(s) 459
BstHHI GCGC 8 cut(s) 242, 282, 306, 458, 703, 1383, 1447, 1970
BstKTI GATC 7 cut(s) 502, 1140, 1705, 1786, 1954, 1993, 2208
BstMAI GTCTC 5 cut(s) 354, 751, 885, 1064, 1308
BstMBI GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
BstMWI GCNNNNNNNGC 9 cut(s) 95, 246, 301, 312, 397, 565, 1378, 1766, 1910
BstNI CCWGG 4 cut(s) 666, 761, 794, 1340
BstSLI GKGCMC 2 cut(s) 175, 2172
BstV1I GCAGC 5 cut(s) 224, 580, 1753, 1756, 2228
BstX2I RGATCY 1 cut(s) 1990
BstXI CCANNNNNNTGG 1 cut(s) 1346
BstYI RGATCY 1 cut(s) 1990
Bsu15I ATCGAT 1 cut(s) 1376
BsuTUI ATCGAT 1 cut(s) 1376
BtgI CCRYGG 3 cut(s) 36, 1040, 1713
BtgZI GCGATG 1 cut(s) 632
BtrI CACGTC 2 cut(s) 63, 1540
BtsCI GGATG 8 cut(s) 48, 332, 850, 929, 1182, 1660, 1753, 1867
BtsIMutI CAGTG 5 cut(s) 637, 1171, 1416, 1625, 2058
BtuMI TCGCGA 1 cut(s) 1283
Cac8I GCNNGC 6 cut(s) 524, 803, 807, 1281, 1449, 1966
CciI TCATGA 1 cut(s) 1926
CfoI GCGC 8 cut(s) 242, 282, 306, 458, 703, 1383, 1447, 1970
Cfr10I RCCGGY 1 cut(s) 805
Cfr13I GGNCC 7 cut(s) 135, 171, 172, 668, 1406, 1501, 1709
ClaI ATCGAT 1 cut(s) 1376
CseI GACGC 9 cut(s) 92, 255, 276, 472, 514, 682, 902, 1852, 2276
CsiI ACCWGGT 1 cut(s) 792
Csp6I GTAC 6 cut(s) 166, 472, 532, 1006, 1048, 1973
CviAII CATG 5 cut(s) 1597, 1927, 2108, 2118, 2185
CviQI GTAC 6 cut(s) 166, 472, 532, 1006, 1048, 1973
DdeI CTNAG 5 cut(s) 564, 849, 1305, 1436, 1524
DpnI GATC 7 cut(s) 501, 1139, 1704, 1785, 1953, 1992, 2207
DpnII GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
DriI GACNNNNNGTC 1 cut(s) 64
EaeI YGGCCR 2 cut(s) 33, 90
Eam1105I GACNNNNNGTC 1 cut(s) 64
EciI GGCGGA 2 cut(s) 378, 471
Ecl136II GAGCTC 2 cut(s) 429, 611
Eco130I CCWWGG 3 cut(s) 93, 138, 219
Eco24I GRGCYC 4 cut(s) 175, 186, 431, 613
Eco31I GGTCTC 1 cut(s) 751
Eco47I GGWCC 4 cut(s) 135, 1406, 1501, 1709
Eco53kI GAGCTC 2 cut(s) 429, 611
Eco57I CTGAAG 2 cut(s) 320, 1439
EcoICRI GAGCTC 2 cut(s) 429, 611
EcoO109I RGGNCCY 1 cut(s) 1709
EcoRII CCWGG 4 cut(s) 664, 759, 792, 1338
EcoT14I CCWWGG 3 cut(s) 93, 138, 219
EcoT38I GRGCYC 4 cut(s) 175, 186, 431, 613
ErhI CCWWGG 3 cut(s) 93, 138, 219
Esp3I CGTCTC 3 cut(s) 354, 885, 1064
FaeI CATG 5 cut(s) 1600, 1930, 2111, 2121, 2188
FalI AAGNNNNNCTT 2 cut(s) 2192, 2224
FaqI GGGAC 6 cut(s) 322, 388, 636, 1009, 1550, 1695
FatI CATG 5 cut(s) 1596, 1926, 2107, 2117, 2184
FauI CCCGC 2 cut(s) 299, 584
FbaI TGATCA 1 cut(s) 1702
FblI GTMKAC 2 cut(s) 726, 2035
FokI GGATG 8 cut(s) 55, 319, 857, 936, 1189, 1667, 1740, 1874
FriOI GRGCYC 4 cut(s) 175, 186, 431, 613
FspBI CTAG 6 cut(s) 179, 999, 1212, 1469, 2075, 2285
GlaI GCGC 8 cut(s) 241, 281, 305, 457, 702, 1382, 1446, 1969
GsaI CCCAGC 1 cut(s) 945
GsuI CTGGAG 2 cut(s) 644, 782
HaeII RGCGCY 1 cut(s) 459
HgaI GACGC 9 cut(s) 92, 255, 276, 472, 514, 682, 902, 1852, 2276
HhaI GCGC 8 cut(s) 242, 282, 306, 458, 703, 1383, 1447, 1970
Hin1I GRCGYC 4 cut(s) 266, 287, 464, 1844
Hin1II CATG 5 cut(s) 1600, 1930, 2111, 2121, 2188
Hin6I GCGC 8 cut(s) 240, 280, 304, 456, 701, 1381, 1445, 1968
HinP1I GCGC 8 cut(s) 240, 280, 304, 456, 701, 1381, 1445, 1968
HincII GTYRAC 1 cut(s) 1842
HindII GTYRAC 1 cut(s) 1842
HindIII AAGCTT 1 cut(s) 2228
HinfI GANTC 8 cut(s) 562, 649, 731, 872, 982, 1162, 1168, 1475
HphI GGTGA 7 cut(s) 136, 142, 556, 654, 820, 965, 2191
Hpy166II GTNNAC 9 cut(s) 58, 196, 727, 828, 1006, 1842, 1867, 2036, 2290
Hpy188I TCNGA 7 cut(s) 292, 504, 779, 877, 919, 1167, 1326
Hpy188III TCNNGA 6 cut(s) 646, 907, 1282, 1604, 1741, 1927
Hpy8I GTNNAC 9 cut(s) 58, 196, 727, 828, 1006, 1842, 1867, 2036, 2290
HpyAV CCTTC 7 cut(s) 1669, 1714, 1852, 1937, 1975, 1981, 2114
HpyCH4III ACNGT 6 cut(s) 31, 130, 556, 632, 979, 1271
HpyCH4IV ACGT 3 cut(s) 62, 530, 1539
HpyCH4V TGCA 8 cut(s) 1102, 1570, 1772, 1913, 2087, 2111, 2162, 2216
HpyF10VI GCNNNNNNNGC 9 cut(s) 95, 246, 301, 312, 397, 565, 1378, 1766, 1910
HpyF3I CTNAG 5 cut(s) 564, 849, 1305, 1436, 1524
HpySE526I ACGT 3 cut(s) 62, 530, 1539
Hsp92I GRCGYC 4 cut(s) 266, 287, 464, 1844
Hsp92II CATG 5 cut(s) 1600, 1930, 2111, 2121, 2188
HspAI GCGC 8 cut(s) 240, 280, 304, 456, 701, 1381, 1445, 1968
KroI GCCGGC 1 cut(s) 805
KroNI GCCGGC 1 cut(s) 807
Ksp22I TGATCA 1 cut(s) 1702
Kzo9I GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
Lsp1109I GCAGC 5 cut(s) 224, 580, 1753, 1756, 2228
LweI GCATC 4 cut(s) 341, 609, 835, 1368
MabI ACCWGGT 1 cut(s) 792
MaeI CTAG 6 cut(s) 179, 999, 1212, 1469, 2075, 2285
MaeII ACGT 3 cut(s) 62, 530, 1539
MaeIII GTNAC 6 cut(s) 100, 124, 544, 1258, 1271, 2070
MalI GATC 7 cut(s) 501, 1139, 1704, 1785, 1953, 1992, 2207
MbiI CCGCTC 1 cut(s) 386
MboI GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
MboII GAAGA 7 cut(s) 649, 895, 977, 1756, 1814, 2200, 2270
MflI RGATCY 1 cut(s) 1990
MhlI GDGCHC 8 cut(s) 175, 186, 297, 431, 613, 768, 1453, 2172
MlyI GAGTC 5 cut(s) 556, 658, 740, 881, 1171
MmeI TCCRAC 4 cut(s) 270, 527, 822, 855
MroNI GCCGGC 1 cut(s) 805
MseI TTAA 8 cut(s) 789, 1182, 1221, 1581, 1661, 1800, 2067, 2144
MspA1I CMGCKG 1 cut(s) 237
Mva1269I GAATGC 3 cut(s) 943, 1099, 1570
MvaI CCWGG 4 cut(s) 666, 761, 794, 1340
MwoI GCNNNNNNNGC 9 cut(s) 95, 246, 301, 312, 397, 565, 1378, 1766, 1910
NaeI GCCGGC 1 cut(s) 807
NciI CCSGG 6 cut(s) 211, 418, 451, 817, 832, 1882
NdeII GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
NgoMIV GCCGGC 1 cut(s) 805
NlaIII CATG 5 cut(s) 1600, 1930, 2111, 2121, 2188
NlaIV GGNNCC 3 cut(s) 173, 1711, 1992
NmeAIII GCCGAG 4 cut(s) 242, 416, 895, 1078
NmuCI GTSAC 4 cut(s) 100, 124, 544, 2070
NruI TCGCGA 1 cut(s) 1283
PagI TCATGA 1 cut(s) 1926
PcsI WCGNNNNNNNCGW 4 cut(s) 68, 284, 362, 545
PctI GAATGC 3 cut(s) 943, 1099, 1570
PdiI GCCGGC 1 cut(s) 807
PfeI GAWTC 3 cut(s) 982, 1168, 1475
Pfl23II CGTACG 1 cut(s) 531
PflFI GACNNNGTC 1 cut(s) 466
PflMI CCANNNNNTGG 1 cut(s) 1631
PfoI TCCNGGA 2 cut(s) 449, 815
PleI GAGTC 5 cut(s) 556, 657, 739, 880, 1170
PpsI GAGTC 5 cut(s) 556, 657, 739, 880, 1170
PpuMI RGGWCCY 1 cut(s) 1709
PsiI TTATAA 1 cut(s) 1482
Psp124BI GAGCTC 2 cut(s) 431, 613
Psp5II RGGWCCY 1 cut(s) 1709
Psp6I CCWGG 4 cut(s) 664, 759, 792, 1338
PspFI CCCAGC 1 cut(s) 941
PspGI CCWGG 4 cut(s) 664, 759, 792, 1338
PspLI CGTACG 1 cut(s) 531
PspN4I GGNNCC 3 cut(s) 173, 1711, 1992
PspOMI GGGCCC 1 cut(s) 171
PspPI GGNCC 7 cut(s) 135, 171, 172, 668, 1406, 1501, 1709
PspPPI RGGWCCY 1 cut(s) 1709
PsuI RGATCY 1 cut(s) 1990
PsyI GACNNNGTC 1 cut(s) 466
RruI TCGCGA 1 cut(s) 1283
RsaI GTAC 6 cut(s) 167, 473, 533, 1007, 1049, 1974
RsaNI GTAC 6 cut(s) 166, 472, 532, 1006, 1048, 1973
SacI GAGCTC 2 cut(s) 431, 613
SaqAI TTAA 8 cut(s) 789, 1182, 1221, 1581, 1661, 1800, 2067, 2144
Sau3AI GATC 7 cut(s) 499, 1137, 1702, 1783, 1951, 1990, 2205
Sau96I GGNCC 7 cut(s) 135, 171, 172, 668, 1406, 1501, 1709
SchI GAGTC 5 cut(s) 556, 658, 740, 881, 1171
SduI GDGCHC 8 cut(s) 175, 186, 297, 431, 613, 768, 1453, 2172
SexAI ACCWGGT 1 cut(s) 792
SfaNI GCATC 4 cut(s) 341, 609, 835, 1368
SinI GGWCC 4 cut(s) 135, 1406, 1501, 1709
SmlI CTYRAG 3 cut(s) 644, 1602, 2173
SmoI CTYRAG 3 cut(s) 644, 1602, 2173
SpeI ACTAGT 2 cut(s) 998, 1211
SspMI CTAG 6 cut(s) 179, 999, 1212, 1469, 2075, 2285
SstI GAGCTC 2 cut(s) 431, 613
StyI CCWWGG 3 cut(s) 93, 138, 219
TaaI ACNGT 6 cut(s) 31, 130, 556, 632, 979, 1271
TaiI ACGT 3 cut(s) 65, 533, 1542
TaqI TCGA 9 cut(s) 269, 365, 498, 693, 755, 836, 1376, 1728, 1782
TaqII GACCGA 1 cut(s) 733
TatI WGTACW 1 cut(s) 1972
TfiI GAWTC 3 cut(s) 982, 1168, 1475
Tru1I TTAA 8 cut(s) 789, 1182, 1221, 1581, 1661, 1800, 2067, 2144
Tru9I TTAA 8 cut(s) 789, 1182, 1221, 1581, 1661, 1800, 2067, 2144
TscAI CASTG 5 cut(s) 637, 1178, 1416, 1632, 2065
TseFI GTSAC 4 cut(s) 100, 124, 544, 2070
TseI GCWGC 5 cut(s) 237, 568, 1766, 1769, 2216
Tsp45I GTSAC 4 cut(s) 100, 124, 544, 2070
TspGWI ACGGA 1 cut(s) 342
TspRI CASTG 5 cut(s) 637, 1178, 1416, 1632, 2065
Tth111I GACNNNGTC 1 cut(s) 466
Van91I CCANNNNNTGG 1 cut(s) 1631
VpaK11BI GGWCC 4 cut(s) 135, 1406, 1501, 1709
XapI RAATTY 2 cut(s) 1153, 2063
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XmiI GTMKAC 2 cut(s) 726, 2035
XspI CTAG 6 cut(s) 179, 999, 1212, 1469, 2075, 2285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.