Rorug07G0236600

disulfide-isomerase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
21721458 .. 21726777
5320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0236600.1

Sequence Viewer

Length: 999 bp
ATGAAAATGTACCAGAAGTCCCCCATTTCGATAATGTTTCTCACCTTGCTTGCCTTGGCTACCACCTTATTACCCAGCTTGGTGCAAAGCCAGACCACCCGTGTCGGATTCTATTCCAGTTCATGTCCTAAGGCAGAGTCCATTGTCACACAAACAGTTCAAAAGCATTTTACATCCGCTCCTTCCATTGCTCCTGGATTACTGAGGATGCACTTTCATGACTGCTTTGTCCAAGGTTGTGATGCTTCTGTCCTCCTCGACGGTGCCAACACTGAAAAAACCGCTGGTCCAAACCGTGGATTGAGAGGTTGGGAAGTTATTGACGATGCAAAGACTCAGCTTGAAGCTGCATGCCCTGGTGTTGTTTCATGTGCAGACATTCTCGCCCTAGCTGCTCGCGATTCTGTCGTCTTGACAAAGGGAATTAACTGGAAGGTACCTACCGGAAGGTTAGACGGACGAGTACCATTGGCATCTGAGACTAACAATCTGCCTGGCTTTAGAGATTCTGTTGATGTACAAAAGACCAAGTTTCAAACTTTTGGTCTCAACACTCAAGATCTTGTCACGCTTGTTGGTGGACACACTATTGGCACTTCAGCTTGCCAGTTCTTCAGGTACAGGCTTTACAACTTCACTACAATTGGAAACGGCGCAGACCCTACCATCAATCCTTCATTTGTTCCTCAACTACGAGCACTTTGCCCCCAAGCTGGTGATGCAGCCAAGCGTGTCGATTTGGACACCGGCAGCGCAACTCGATTTGATGCAACATTCTTTACAAACTTAAAGAACGGCCGCGGGATACTCGAGTCTGATCAAAAGTTATGGACTGATGCCTCCACAAAAAGCCTTGTCCAACGGTTCTTGGGTGTGAGAGGTTTGCGGGCATTGAACTTCAACGTAGAGTTCGGAAGATCCATGGTGAAGATGAGTACTATCGGTGTAAAGTCTGCAACAAATGGTGAAATTCGCCGCATTTGTTCTGCAATTAACTAA

Protein Analysis

332

Amino Acids

35.96

Weight (kDa)

9.33

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 49 - 289 2.1e-84 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 227
Acc65I GGTACC 1 cut(s) 436
AccB1I GGYRCC 2 cut(s) 263, 436
AccB7I CCANNNNNTGG 1 cut(s) 296
AccBSI CCGCTC 1 cut(s) 179
AccII CGCG 2 cut(s) 399, 801
AciI CCGC 6 cut(s) 177, 282, 799, 801, 886, 976
AclWI GGATC 1 cut(s) 912
AcoI YGGCCR 1 cut(s) 796
AcsI RAATTY 1 cut(s) 969
AcuI CTGAAG 2 cut(s) 582, 598
AfaI GTAC 6 cut(s) 11, 438, 465, 519, 620, 937
AfiI CCNNNNNNNGG 2 cut(s) 296, 713
AgsI TTSAA 5 cut(s) 161, 344, 536, 895, 901
AjnI CCWGG 3 cut(s) 193, 355, 493
AluBI AGCT 6 cut(s) 78, 340, 347, 392, 602, 713
AluI AGCT 6 cut(s) 78, 340, 347, 392, 602, 713
Alw21I GWGCWC 1 cut(s) 700
Alw26I GTCTC 2 cut(s) 473, 551
AlwI GGATC 1 cut(s) 912
Ama87I CYCGRG 1 cut(s) 809
AoxI GGCC 1 cut(s) 796
ApeKI GCWGC 4 cut(s) 347, 392, 722, 750
ApoI RAATTY 1 cut(s) 969
ArsI GACNNNNNNTTYG 2 cut(s) 529, 561
Asp718I GGTACC 1 cut(s) 436
AspLEI GCGC 2 cut(s) 656, 755
AspS9I GGNCC 1 cut(s) 287
AsuHPI GGTGA 4 cut(s) 34, 728, 937, 977
AvaI CYCGRG 1 cut(s) 809
AvaII GGWCC 1 cut(s) 287
AxyI CCTNAGG 1 cut(s) 129
BaeI ACNNNNGTAYC 2 cut(s) 797, 830
BanI GGYRCC 2 cut(s) 263, 436
Bbv12I GWGCWC 1 cut(s) 700
BbvI GCAGC 4 cut(s) 334, 379, 734, 762
BccI CCATC 1 cut(s) 674
BceAI ACGGC 2 cut(s) 667, 811
BcgI CGANNNNNNTGC 2 cut(s) 684, 718
BciT130I CCWGG 3 cut(s) 195, 357, 495
BciVI GTATCC 1 cut(s) 798
BclI TGATCA 1 cut(s) 817
BcoDI GTCTC 2 cut(s) 473, 551
BfaI CTAG 1 cut(s) 389
BfuI GTATCC 1 cut(s) 798
BglII AGATCT 1 cut(s) 559
BisI GCNGC 6 cut(s) 348, 393, 723, 751, 799, 976
BlsI GCNGC 6 cut(s) 349, 394, 724, 752, 800, 977
BmcAI AGTACT 1 cut(s) 937
Bme1390I CCNGG 3 cut(s) 195, 357, 495
Bme18I GGWCC 1 cut(s) 287
BmeT110I CYCGRG 1 cut(s) 809
BmgT120I GGNCC 1 cut(s) 287
BmiI GGNNCC 2 cut(s) 265, 438
BmrFI CCNGG 3 cut(s) 195, 357, 495
BmsI GCATC 7 cut(s) 198, 232, 316, 482, 709, 757, 826
BpuEI CTTGAG 1 cut(s) 540
BsaI GGTCTC 1 cut(s) 551
BsaJI CCNNGG 6 cut(s) 54, 232, 295, 355, 799, 921
BsaWI WCCGGW 1 cut(s) 443
BsaXI ACNNNNNCTCC 2 cut(s) 163, 193
Bsc4I CCNNNNNNNGG 2 cut(s) 296, 713
Bse118I RCCGGY 1 cut(s) 746
Bse1I ACTGG 3 cut(s) 117, 434, 607
Bse21I CCTNAGG 1 cut(s) 129
Bse3DI GCAATG 1 cut(s) 186
BseBI CCWGG 3 cut(s) 195, 357, 495
BseDI CCNNGG 6 cut(s) 54, 232, 295, 355, 799, 921
BseGI GGATG 2 cut(s) 173, 213
BseLI CCNNNNNNNGG 2 cut(s) 296, 713
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 3 cut(s) 194, 350, 468
BseNI ACTGG 3 cut(s) 117, 434, 607
BseRI GAGGAG 1 cut(s) 245
BseX3I CGGCCG 1 cut(s) 796
BseXI GCAGC 4 cut(s) 334, 379, 734, 762
BseYI CCCAGC 1 cut(s) 74
BsgI GTGCAG 1 cut(s) 393
Bsh1236I CGCG 2 cut(s) 399, 801
Bsh1285I CGRYCG 1 cut(s) 799
BshFI GGCC 1 cut(s) 798
BshNI GGYRCC 2 cut(s) 263, 436
BsiEI CGRYCG 1 cut(s) 799
BsiHKAI GWGCWC 1 cut(s) 700
BsiHKCI CYCGRG 1 cut(s) 809
BsiSI CCGG 2 cut(s) 444, 747
BslFI GGGAC 1 cut(s) 4
BslI CCNNNNNNNGG 2 cut(s) 296, 713
BsmAI GTCTC 2 cut(s) 473, 551
BsmFI GGGAC 1 cut(s) 4
BsnI GGCC 1 cut(s) 798
Bso31I GGTCTC 1 cut(s) 551
BsoBI CYCGRG 1 cut(s) 809
Bsp1286I GDGCHC 1 cut(s) 700
Bsp1407I TGTACA 1 cut(s) 517
Bsp143I GATC 3 cut(s) 559, 817, 917
Bsp19I CCATGG 1 cut(s) 921
Bsp68I TCGCGA 1 cut(s) 399
BspACI CCGC 6 cut(s) 177, 282, 799, 801, 886, 976
BspANI GGCC 1 cut(s) 798
BspCNI CTCAG 3 cut(s) 195, 349, 469
BspFNI CGCG 2 cut(s) 399, 801
BspHI TCATGA 1 cut(s) 217
BspLI GGNNCC 2 cut(s) 265, 438
BspPI GGATC 1 cut(s) 912
BspT107I GGYRCC 2 cut(s) 263, 436
BspTNI GGTCTC 1 cut(s) 551
BsrBI CCGCTC 1 cut(s) 179
BsrDI GCAATG 1 cut(s) 186
BsrFI RCCGGY 1 cut(s) 746
BsrGI TGTACA 1 cut(s) 517
BsrI ACTGG 3 cut(s) 117, 434, 607
BssAI RCCGGY 1 cut(s) 746
BssECI CCNNGG 6 cut(s) 54, 232, 295, 355, 799, 921
BssMI GATC 3 cut(s) 559, 817, 917
BssT1I CCWWGG 3 cut(s) 54, 232, 921
Bst2UI CCWGG 3 cut(s) 195, 357, 495
Bst4CI ACNGT 4 cut(s) 157, 263, 296, 864
BstAUI TGTACA 1 cut(s) 517
BstC8I GCNNGC 5 cut(s) 51, 352, 397, 604, 888
BstDEI CTNAG 4 cut(s) 129, 203, 336, 477
BstDSI CCRYGG 3 cut(s) 295, 799, 921
BstF5I GGATG 2 cut(s) 173, 213
BstFNI CGCG 2 cut(s) 399, 801
BstHHI GCGC 2 cut(s) 656, 755
BstKTI GATC 3 cut(s) 562, 820, 920
BstMAI GTCTC 2 cut(s) 473, 551
BstMBI GATC 3 cut(s) 559, 817, 917
BstMCI CGRYCG 1 cut(s) 799
BstMWI GCNNNNNNNGC 2 cut(s) 392, 719
BstNI CCWGG 3 cut(s) 195, 357, 495
BstNSI RCATGY 1 cut(s) 354
BstSCI CCNGG 3 cut(s) 193, 355, 493
BstUI CGCG 2 cut(s) 399, 801
BstV1I GCAGC 4 cut(s) 334, 379, 734, 762
BstX2I RGATCY 2 cut(s) 559, 917
BstYI RGATCY 2 cut(s) 559, 917
BstZI CGGCCG 1 cut(s) 796
Bsu36I CCTNAGG 1 cut(s) 129
BsuI GTATCC 1 cut(s) 798
BsuRI GGCC 1 cut(s) 798
BtgI CCRYGG 3 cut(s) 295, 799, 921
BtsCI GGATG 2 cut(s) 173, 213
BtsIMutI CAGTG 1 cut(s) 270
BtuMI TCGCGA 1 cut(s) 399
Cac8I GCNNGC 5 cut(s) 51, 352, 397, 604, 888
CciI TCATGA 1 cut(s) 217
CfoI GCGC 2 cut(s) 656, 755
Cfr10I RCCGGY 1 cut(s) 746
Cfr13I GGNCC 1 cut(s) 287
Cfr42I CCGCGG 1 cut(s) 802
Csp6I GTAC 6 cut(s) 10, 437, 464, 518, 619, 936
CviAII CATG 5 cut(s) 123, 218, 351, 369, 922
CviQI GTAC 6 cut(s) 10, 437, 464, 518, 619, 936
DdeI CTNAG 4 cut(s) 129, 203, 336, 477
DpnI GATC 3 cut(s) 561, 819, 919
DpnII GATC 3 cut(s) 559, 817, 917
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 1 cut(s) 796
EagI CGGCCG 1 cut(s) 796
EclXI CGGCCG 1 cut(s) 796
Eco130I CCWWGG 3 cut(s) 54, 232, 921
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 1 cut(s) 287
Eco52I CGGCCG 1 cut(s) 796
Eco57I CTGAAG 2 cut(s) 582, 598
Eco81I CCTNAGG 1 cut(s) 129
Eco88I CYCGRG 1 cut(s) 809
EcoRII CCWGG 3 cut(s) 193, 355, 493
EcoT14I CCWWGG 3 cut(s) 54, 232, 921
ErhI CCWWGG 3 cut(s) 54, 232, 921
FaeI CATG 5 cut(s) 126, 221, 354, 372, 925
FaiI YATR 6 cut(s) 124, 219, 352, 370, 829, 923
FaqI GGGAC 1 cut(s) 4
FatI CATG 5 cut(s) 122, 217, 350, 368, 921
FauI CCCGC 2 cut(s) 794, 879
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 6 cut(s) 348, 393, 723, 751, 799, 976
FokI GGATG 2 cut(s) 160, 220
Fsp4HI GCNGC 6 cut(s) 348, 393, 723, 751, 799, 976
FspBI CTAG 1 cut(s) 389
GlaI GCGC 2 cut(s) 655, 754
GluI GCNGC 6 cut(s) 348, 393, 723, 751, 799, 976
GsaI CCCAGC 1 cut(s) 78
HaeIII GGCC 1 cut(s) 798
HapII CCGG 2 cut(s) 444, 747
HhaI GCGC 2 cut(s) 656, 755
Hin1II CATG 5 cut(s) 126, 221, 354, 372, 925
Hin6I GCGC 2 cut(s) 654, 753
HinP1I GCGC 2 cut(s) 654, 753
HinfI GANTC 6 cut(s) 108, 137, 334, 401, 506, 812
HpaII CCGG 2 cut(s) 444, 747
HphI GGTGA 4 cut(s) 34, 728, 937, 977
Hpy166II GTNNAC 1 cut(s) 581
Hpy188I TCNGA 4 cut(s) 107, 478, 817, 914
Hpy188III TCNNGA 4 cut(s) 218, 398, 412, 557
Hpy8I GTNNAC 1 cut(s) 581
Hpy99I CGWCG 1 cut(s) 263
HpyAV CCTTC 4 cut(s) 192, 427, 441, 684
HpyCH4III ACNGT 4 cut(s) 157, 263, 296, 864
HpyCH4IV ACGT 1 cut(s) 903
HpyCH4V TGCA 9 cut(s) 85, 211, 329, 350, 374, 722, 770, 956, 989
HpyF10VI GCNNNNNNNGC 2 cut(s) 392, 719
HpyF3I CTNAG 4 cut(s) 129, 203, 336, 477
HpySE526I ACGT 1 cut(s) 903
Hsp92II CATG 5 cut(s) 126, 221, 354, 372, 925
HspAI GCGC 2 cut(s) 654, 753
KpnI GGTACC 1 cut(s) 440
Ksp22I TGATCA 1 cut(s) 817
KspI CCGCGG 1 cut(s) 802
Kzo9I GATC 3 cut(s) 559, 817, 917
LmnI GCTCC 2 cut(s) 184, 196
Lsp1109I GCAGC 4 cut(s) 334, 379, 734, 762
LweI GCATC 7 cut(s) 198, 232, 316, 482, 709, 757, 826
MaeI CTAG 1 cut(s) 389
MaeII ACGT 1 cut(s) 903
MaeIII GTNAC 2 cut(s) 145, 565
MalI GATC 3 cut(s) 561, 819, 919
MbiI CCGCTC 1 cut(s) 179
MboI GATC 3 cut(s) 559, 817, 917
MboII GAAGA 3 cut(s) 604, 927, 940
MfeI CAATTG 1 cut(s) 642
MflI RGATCY 2 cut(s) 559, 917
MhlI GDGCHC 1 cut(s) 700
MluCI AATT 4 cut(s) 423, 642, 969, 990
MlyI GAGTC 3 cut(s) 146, 328, 821
MmeI TCCRAC 2 cut(s) 85, 883
MnlI CCTC 7 cut(s) 198, 263, 266, 299, 696, 850, 872
MseI TTAA 3 cut(s) 426, 788, 993
MslI CAYNNNNRTG 1 cut(s) 216
MspA1I CMGCKG 2 cut(s) 284, 801
MspI CCGG 2 cut(s) 444, 747
MspR9I CCNGG 3 cut(s) 195, 357, 495
MunI CAATTG 1 cut(s) 642
MvaI CCWGG 3 cut(s) 195, 357, 495
MvnI CGCG 2 cut(s) 399, 801
MwoI GCNNNNNNNGC 2 cut(s) 392, 719
NcoI CCATGG 1 cut(s) 921
NdeII GATC 3 cut(s) 559, 817, 917
NlaIII CATG 5 cut(s) 126, 221, 354, 372, 925
NlaIV GGNNCC 2 cut(s) 265, 438
NmuCI GTSAC 2 cut(s) 145, 565
NruI TCGCGA 1 cut(s) 399
NspI RCATGY 1 cut(s) 354
PaeI GCATGC 1 cut(s) 354
PaeR7I CTCGAG 1 cut(s) 809
PagI TCATGA 1 cut(s) 217
PfeI GAWTC 3 cut(s) 108, 401, 506
PflMI CCANNNNNTGG 1 cut(s) 296
PfoI TCCNGGA 1 cut(s) 193
PkrI GCNGC 6 cut(s) 349, 394, 724, 752, 800, 977
PleI GAGTC 3 cut(s) 145, 328, 820
PpsI GAGTC 3 cut(s) 145, 328, 820
Psp6I CCWGG 3 cut(s) 193, 355, 493
PspFI CCCAGC 1 cut(s) 74
PspGI CCWGG 3 cut(s) 193, 355, 493
PspN4I GGNNCC 2 cut(s) 265, 438
PspPI GGNCC 1 cut(s) 287
PspXI VCTCGAGB 1 cut(s) 809
PsuI RGATCY 2 cut(s) 559, 917
RruI TCGCGA 1 cut(s) 399
RsaI GTAC 6 cut(s) 11, 438, 465, 519, 620, 937
RsaNI GTAC 6 cut(s) 10, 437, 464, 518, 619, 936
RseI CAYNNNNRTG 1 cut(s) 216
SacII CCGCGG 1 cut(s) 802
SaqAI TTAA 3 cut(s) 426, 788, 993
SatI GCNGC 6 cut(s) 348, 393, 723, 751, 799, 976
Sau3AI GATC 3 cut(s) 559, 817, 917
Sau96I GGNCC 1 cut(s) 287
ScaI AGTACT 1 cut(s) 937
SchI GAGTC 3 cut(s) 146, 328, 821
ScrFI CCNGG 3 cut(s) 195, 357, 495
SduI GDGCHC 1 cut(s) 700
SfaNI GCATC 7 cut(s) 198, 232, 316, 482, 709, 757, 826
Sfr274I CTCGAG 1 cut(s) 809
Sfr303I CCGCGG 1 cut(s) 802
SgrBI CCGCGG 1 cut(s) 802
SinI GGWCC 1 cut(s) 287
SlaI CTCGAG 1 cut(s) 809
SmiMI CAYNNNNRTG 1 cut(s) 216
SmlI CTYRAG 2 cut(s) 555, 809
SmoI CTYRAG 2 cut(s) 555, 809
SphI GCATGC 1 cut(s) 354
Sse9I AATT 4 cut(s) 423, 642, 969, 990
SsiI CCGC 6 cut(s) 177, 282, 799, 801, 886, 976
SspMI CTAG 1 cut(s) 389
StyD4I CCNGG 3 cut(s) 193, 355, 493
StyI CCWWGG 3 cut(s) 54, 232, 921
TaaI ACNGT 4 cut(s) 157, 263, 296, 864
TaiI ACGT 1 cut(s) 906
TaqI TCGA 5 cut(s) 29, 258, 735, 760, 810
TasI AATT 4 cut(s) 423, 642, 969, 990
TatI WGTACW 2 cut(s) 517, 935
TauI GCSGC 2 cut(s) 801, 978
TfiI GAWTC 3 cut(s) 108, 401, 506
Tru1I TTAA 3 cut(s) 426, 788, 993
Tru9I TTAA 3 cut(s) 426, 788, 993
TscAI CASTG 1 cut(s) 277
TseFI GTSAC 2 cut(s) 145, 565
TseI GCWGC 4 cut(s) 347, 392, 722, 750
Tsp45I GTSAC 2 cut(s) 145, 565
TspDTI ATGAA 5 cut(s) 17, 111, 206, 357, 666
TspGWI ACGGA 1 cut(s) 471
TspRI CASTG 1 cut(s) 277
Van91I CCANNNNNTGG 1 cut(s) 296
VpaK11BI GGWCC 1 cut(s) 287
XapI RAATTY 1 cut(s) 969
XceI RCATGY 1 cut(s) 354
XhoI CTCGAG 1 cut(s) 809
XspI CTAG 1 cut(s) 389
ZrmI AGTACT 1 cut(s) 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.