Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003109

Physical Location & Seq

Genomic Coordinates Reverse (-)

24734184 .. 24740940

Gene Structure 6757 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0263300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGGTCGAAAGCTCAAAGACCCCTCAACTCTCAGCGACCCAGAAGCCCAGGAAGCCACGAACCACCGCGAAGCCAAAGCCGAGAAGAAGAAAAAGAAGCACAAAAACAGACACAGAGACGAAGAAGAAGAAGAAGATGACCAACTCAGTCCTCCTAAGCGAAAGTTGGAGGAAGAGAATTCAGAATCTAAAAAGAAGAAGAAGAAGCACAAGAAATCGAAAGAGAGCGTAAACAATGAGGAGGAGCCGAAGGGAAATGGAGAAGTGGAAGAGAGTAATTCCACTGATGCGGTTGTGATGGTTACTGGGAAAGATGCTAATGAAGCCAAATACAAGCCGTTGGATTCGTTCGCGGAGTCGAAGCTTCCCAGTGAGGTTTTACAGTGCTGTGTGAATTTCCAGAGACCGTCTCCGATTCAATCCCGGGCGTGGCCTTTCTTGTTGGACGGTCGTGATTTTATCGGGATTGCGAAAACTGGGTCAGGTAAAACTTTGGCGTTTGGGATACCAGCTATTAATCAGGTGTTGAATAAGAGGAATGGTAAGTTTTCGAGGGGGAGATATCCTCTCTGTCTTGTGCTCGCACCTACAAGAGAGCTAGCTCAACAAATTTCAGATGTACTGGTTGAGGCTGGGAAACCTTGTGGTGTGGAATCAGTTTGTTTGTATGGGGGAACATCTAAAGGACCTCAAATATCTTCTCTGAAATCTGGTGTGGACATCGTTATTGGAACACCTGGTCGTTTGAAGGATCTCATTGAAATGGGTTTGTGTTGCCTTAAGGAAGTATCTTTTGCGGTCCTTGATGAAGCAGATAGAATGCTTGACATGGGATTTGAACCTGAAGTCCGCTATATACTGGGACAGACATGCTCGGCTCGCCAAATGGTAATGTTCAGTGCGACATGGCCTCCATCAGTTCATCAGTTAGCTCAGGAGTTCATGGATCCTAATCCAGTTAAGGTGGTTGTTGGTTCAGAGGATTTAGCTGCCAACCATGATGTCCTGCAGATAGTCGAGGTCTTGGATGATCGATCTCGCGATGCACGTTTGGTTGCTTTGCTAGAAAAATACCACAAATCCAAAGGAAACAGAGTTTTGGTGTTTGTCTTGTACAAAATGGAAGCTACTCGTGTTGAAAATATGCTGCAAAGAGGGGGTTGGAAGGTCTGTTCTATACATGGTGATAAAGCACAAAATCAGCGCACACAGGCACTATCTCTATTTAAGCAGGGAAGCTGCCCCTTGATGATTGCTACTGATGTGGCTGCTCGAGGATTAGATATCCCAGATGTTGAGGTAGTGATTAACTATAGTTTTCCACTCACTACCGAGGATTATGTCCACAGAATTGGGCGCACTGGACGGGCCGGTAAGAAGGGTGTTGCTCATACCTTTTTCACACATCACAACAAGGGACTTGCTGGGGAGCTGGTCAATGTTCTCAGAGAAGCTGGGCAAAATGTGCCAGCTGACTTGTTGAAGTTTGGCACTCATGTAAAGAAAAAGGAATCCAAACTTTATGGGGCTCACTTCAGAGAAATTTCTGCCGATGCTCCAAAGGCTAAAAAGATCACATTCGCTGACTCTGATGATGAAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010143 GO:0010166 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0042221 GO:0043170 GO:0043565 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071369 GO:0071495 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901568 GO:1901576 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

534

Amino Acids

59.26

Weight (kDa)

8.47

Isoelectric Point (pI)

35.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	137 - 309	4.6e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	352 - 458	1.8e-31	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003109)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15360 AT1G15360
fragaria_vesca	FvH4_1g03190 FvH4_6g29930
malus_domestica	MD02G1030900.v1.1 MD15G1172600.v1.1 MD17G1209000.v1.1
prunus_persica	Prupe.3G084600_v2.0.a1 Prupe.7G243600_v2.0.a1
pyrus_communis	pycom15g15430
rosa_chinensis	RchiOBHm_Chr2g0088321 RchiOBHm_Chr2g0135921 RchiOBHm_Chr7g0230931
rosa_laevigata	RLG00000015943 RLG00000019490
rosa_multiflora	Rmu_sc0000483.1_g000022 Rmu_sc0004235.1_g000029 Rmu_sc0004243.1_g000002
rosa_roxburghii	Rroxscaffold_2G00108770 Rroxscaffold_2G00152750 Rroxscaffold_3G00229670
rosa_rugosa	Rorug01G0482900 Rorug02G0326900 Rorug07G0263300 Rorug07G0263400
rosa_samantha	Rh2AG378500 Rh2BG037200 Rh2BG385100 Rh2CG038300 Rh2CG364200 Rh2DG401400 Rh7AG416500 Rh7CG435700 Rh7DG410800
rosa_wichuraiana	Rw2G003000 Rw2G030840 Rw7G034490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	69, 353, 1041
AciI	CCGC	5 cut(s)	67, 290, 353, 797, 850
AclWI	GGATC	3 cut(s)	759, 941, 954
AcsI	RAATTY	4 cut(s)	178, 394, 609, 1542
AcuI	CTGAAG	2 cut(s)	864, 1519
AfaI	GTAC	2 cut(s)	621, 1115
AfiI	CCNNNNNNNGG	1 cut(s)	429
AflII	CTTAAG	1 cut(s)	779
AgsI	TTSAA	7 cut(s)	419, 529, 748, 761, 839, 1139, 1483
AjnI	CCWGG	2 cut(s)	48, 736
AloI	GAACNNNNNNTCC	4 cut(s)	831, 863, 1156, 1188
Alw21I	GWGCWC	1 cut(s)	582
Alw26I	GTCTC	3 cut(s)	111, 397, 414
AlwI	GGATC	3 cut(s)	759, 941, 954
Ama87I	CYCGRG	2 cut(s)	423, 1272
AoxI	GGCC	3 cut(s)	431, 908, 1368
ApeKI	GCWGC	4 cut(s)	989, 1147, 1239, 1268
ApoI	RAATTY	4 cut(s)	178, 394, 609, 1542
ArsI	GACNNNNNNTTYG	4 cut(s)	464, 496, 818, 850
AseI	ATTAAT	1 cut(s)	516
AspLEI	GCGC	2 cut(s)	1206, 1359
AspS9I	GGNCC	3 cut(s)	686, 799, 1368
AsuC2I	CCSGG	2 cut(s)	424, 425
AsuHPI	GGTGA	1 cut(s)	1196
AsuNHI	GCTAGC	1 cut(s)	598
AvaI	CYCGRG	2 cut(s)	423, 1272
AvaII	GGWCC	2 cut(s)	686, 799
BamHI	GGATCC	1 cut(s)	946
BanII	GRGCYC	1 cut(s)	1531
BauI	CACGAG	1 cut(s)	1131
Bbv12I	GWGCWC	1 cut(s)	582
BbvI	GCAGC	4 cut(s)	976, 1134, 1226, 1255
BccI	CCATC	2 cut(s)	292, 922
BceAI	ACGGC	1 cut(s)	322
BciT130I	CCWGG	2 cut(s)	50, 738
BciVI	GTATCC	1 cut(s)	498
BcnI	CCSGG	2 cut(s)	424, 425
BcoDI	GTCTC	3 cut(s)	111, 397, 414
BfaI	CTAG	2 cut(s)	599, 1064
BfmI	CTRYAG	2 cut(s)	1007, 1312
BfrI	CTTAAG	1 cut(s)	779
BfuI	GTATCC	1 cut(s)	498
BisI	GCNGC	4 cut(s)	990, 1148, 1240, 1269
BlsI	GCNGC	4 cut(s)	991, 1149, 1241, 1270
Bme1390I	CCNGG	4 cut(s)	50, 424, 425, 738
Bme18I	GGWCC	2 cut(s)	686, 799
BmeT110I	CYCGRG	2 cut(s)	423, 1272
BmgT120I	GGNCC	3 cut(s)	686, 799, 1368
BmiI	GGNNCC	2 cut(s)	246, 948
BmrFI	CCNGG	4 cut(s)	50, 424, 425, 738
BmrI	ACTGGG	4 cut(s)	315, 363, 486, 869
BmsI	GCATC	4 cut(s)	277, 304, 1033, 1543
BmtI	GCTAGC	1 cut(s)	602
BmuI	ACTGGG	4 cut(s)	315, 363, 486, 869
BplI	GAGNNNNNCTC	4 cut(s)	394, 426, 550, 582
Bpu10I	CCTNAGC	2 cut(s)	156, 933
BpuMI	CCSGG	2 cut(s)	424, 425
Bsa29I	ATCGAT	1 cut(s)	1033
BsaBI	GATNNNNATC	1 cut(s)	951
BsaI	GGTCTC	1 cut(s)	397
BsaJI	CCNNGG	3 cut(s)	48, 423, 1332
BsaXI	ACNNNNNCTCC	2 cut(s)	895, 925
Bsc4I	CCNNNNNNNGG	1 cut(s)	429
Bse118I	RCCGGY	1 cut(s)	1370
Bse1I	ACTGG	7 cut(s)	310, 369, 481, 627, 864, 956, 1366
Bse8I	GATNNNNATC	1 cut(s)	951
BseBI	CCWGG	2 cut(s)	50, 738
BseCI	ATCGAT	1 cut(s)	1033
BseDI	CCNNGG	3 cut(s)	48, 423, 1332
BseGI	GGATG	1 cut(s)	1033
BseJI	GATNNNNATC	1 cut(s)	951
BseLI	CCNNNNNNNGG	1 cut(s)	429
BseMII	CTCAG	4 cut(s)	46, 160, 947, 1459
BseNI	ACTGG	7 cut(s)	310, 369, 481, 627, 864, 956, 1366
BseRI	GAGGAG	2 cut(s)	254, 257
BseXI	GCAGC	4 cut(s)	976, 1134, 1226, 1255
BseYI	CCCAGC	3 cut(s)	632, 1424, 1454
Bsh1236I	CGCG	3 cut(s)	69, 353, 1041
Bsh1285I	CGRYCG	1 cut(s)	451
BshFI	GGCC	3 cut(s)	433, 910, 1370
BshVI	ATCGAT	1 cut(s)	1033
BsiEI	CGRYCG	1 cut(s)	451
BsiHKAI	GWGCWC	1 cut(s)	582
BsiHKCI	CYCGRG	2 cut(s)	423, 1272
BsiSI	CCGG	2 cut(s)	424, 1371
BslFI	GGGAC	2 cut(s)	876, 1431
BslI	CCNNNNNNNGG	1 cut(s)	429
BsmAI	GTCTC	3 cut(s)	111, 397, 414
BsmBI	CGTCTC	2 cut(s)	111, 414
BsmFI	GGGAC	2 cut(s)	876, 1431
BsmI	GAATGC	1 cut(s)	825
BsnI	GGCC	3 cut(s)	433, 910, 1370
Bso31I	GGTCTC	1 cut(s)	397
BsoBI	CYCGRG	2 cut(s)	423, 1272
Bsp1286I	GDGCHC	2 cut(s)	582, 1531
Bsp1407I	TGTACA	1 cut(s)	1113
Bsp143I	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
Bsp68I	TCGCGA	1 cut(s)	1041
BspACI	CCGC	5 cut(s)	67, 290, 353, 797, 850
BspANI	GGCC	3 cut(s)	433, 910, 1370
BspCNI	CTCAG	4 cut(s)	45, 159, 946, 1458
BspDI	ATCGAT	1 cut(s)	1033
BspFNI	CGCG	3 cut(s)	69, 353, 1041
BspLI	GGNNCC	2 cut(s)	246, 948
BspMAI	CTGCAG	1 cut(s)	1011
BspOI	GCTAGC	1 cut(s)	602
BspPI	GGATC	3 cut(s)	759, 941, 954
BspTI	CTTAAG	1 cut(s)	779
BspTNI	GGTCTC	1 cut(s)	397
BsrFI	RCCGGY	1 cut(s)	1370
BsrGI	TGTACA	1 cut(s)	1113
BsrI	ACTGG	7 cut(s)	310, 369, 481, 627, 864, 956, 1366
BssAI	RCCGGY	1 cut(s)	1370
BssECI	CCNNGG	3 cut(s)	48, 423, 1332
BssMI	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
BssSI	CACGAG	1 cut(s)	1131
Bst2BI	CACGAG	1 cut(s)	1131
Bst2UI	CCWGG	2 cut(s)	50, 738
Bst4CI	ACNGT	3 cut(s)	384, 408, 449
Bst6I	CTCTTC	2 cut(s)	168, 264
BstAFI	CTTAAG	1 cut(s)	779
BstAPI	GCANNNNNTGC	1 cut(s)	1465
BstAUI	TGTACA	1 cut(s)	1113
BstC8I	GCNNGC	4 cut(s)	582, 600, 880, 1470
BstDEI	CTNAG	5 cut(s)	32, 146, 156, 933, 1445
BstF5I	GGATG	1 cut(s)	1033
BstFNI	CGCG	3 cut(s)	69, 353, 1041
BstHHI	GCGC	2 cut(s)	1206, 1359
BstKTI	GATC	5 cut(s)	754, 949, 1033, 1037, 1575
BstMAI	GTCTC	3 cut(s)	111, 397, 414
BstMBI	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
BstMCI	CGRYCG	1 cut(s)	451
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 323, 879, 1465, 1562
BstNI	CCWGG	2 cut(s)	50, 738
BstNSI	RCATGY	1 cut(s)	873
BstSCI	CCNGG	4 cut(s)	48, 422, 423, 736
BstSFI	CTRYAG	2 cut(s)	1007, 1312
BstUI	CGCG	3 cut(s)	69, 353, 1041
BstV1I	GCAGC	4 cut(s)	976, 1134, 1226, 1255
BstX2I	RGATCY	2 cut(s)	751, 946
BstXI	CCANNNNNNTGG	1 cut(s)	1352
BstYI	RGATCY	2 cut(s)	751, 946
Bsu15I	ATCGAT	1 cut(s)	1033
BsuI	GTATCC	1 cut(s)	498
BsuRI	GGCC	3 cut(s)	433, 910, 1370
BsuTUI	ATCGAT	1 cut(s)	1033
BtgZI	GCGATG	1 cut(s)	1056
BtsCI	GGATG	1 cut(s)	1033
BtsIMutI	CAGTG	5 cut(s)	282, 376, 389, 904, 1359
BtuMI	TCGCGA	1 cut(s)	1041
Cac8I	GCNNGC	4 cut(s)	582, 600, 880, 1470
CfoI	GCGC	2 cut(s)	1206, 1359
Cfr10I	RCCGGY	1 cut(s)	1370
Cfr13I	GGNCC	3 cut(s)	686, 799, 1368
Cfr9I	CCCGGG	1 cut(s)	423
ClaI	ATCGAT	1 cut(s)	1033
CsiI	ACCWGGT	1 cut(s)	736
Csp6I	GTAC	2 cut(s)	620, 1114
CviAII	CATG	7 cut(s)	829, 870, 906, 943, 998, 1181, 1496
CviQI	GTAC	2 cut(s)	620, 1114
DdeI	CTNAG	5 cut(s)	32, 146, 156, 933, 1445
DpnI	GATC	5 cut(s)	753, 948, 1032, 1036, 1574
DpnII	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
Eam1104I	CTCTTC	2 cut(s)	168, 264
EarI	CTCTTC	2 cut(s)	168, 264
Eco24I	GRGCYC	1 cut(s)	1531
Eco31I	GGTCTC	1 cut(s)	397
Eco32I	GATATC	2 cut(s)	563, 1285
Eco47I	GGWCC	2 cut(s)	686, 799
Eco57I	CTGAAG	2 cut(s)	864, 1519
Eco88I	CYCGRG	2 cut(s)	423, 1272
EcoO109I	RGGNCCY	1 cut(s)	686
EcoRI	GAATTC	1 cut(s)	178
EcoRII	CCWGG	2 cut(s)	48, 736
EcoRV	GATATC	2 cut(s)	563, 1285
EcoT38I	GRGCYC	1 cut(s)	1531
Esp3I	CGTCTC	2 cut(s)	111, 414
FaeI	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
FaqI	GGGAC	2 cut(s)	876, 1431
FatI	CATG	7 cut(s)	828, 869, 905, 942, 997, 1180, 1495
Fnu4HI	GCNGC	4 cut(s)	990, 1148, 1240, 1269
FokI	GGATG	1 cut(s)	1040
FriOI	GRGCYC	1 cut(s)	1531
Fsp4HI	GCNGC	4 cut(s)	990, 1148, 1240, 1269
FspBI	CTAG	2 cut(s)	599, 1064
GlaI	GCGC	2 cut(s)	1205, 1358
GluI	GCNGC	4 cut(s)	990, 1148, 1240, 1269
GsaI	CCCAGC	3 cut(s)	636, 1428, 1458
HaeIII	GGCC	3 cut(s)	433, 910, 1370
HapII	CCGG	2 cut(s)	424, 1371
HhaI	GCGC	2 cut(s)	1206, 1359
Hin1II	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
Hin6I	GCGC	2 cut(s)	1204, 1357
HinP1I	GCGC	2 cut(s)	1204, 1357
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	7 cut(s)	185, 344, 356, 415, 653, 1511, 1586
HpaII	CCGG	2 cut(s)	424, 1371
HphI	GGTGA	1 cut(s)	1196
Hpy166II	GTNNAC	3 cut(s)	232, 718, 1345
Hpy188I	TCNGA	8 cut(s)	184, 414, 616, 705, 979, 1448, 1538, 1591
Hpy188III	TCNNGA	5 cut(s)	400, 452, 463, 935, 1040
Hpy8I	GTNNAC	3 cut(s)	232, 718, 1345
HpyAV	CCTTC	4 cut(s)	244, 742, 1159, 1372
HpyCH4III	ACNGT	3 cut(s)	384, 408, 449
HpyCH4IV	ACGT	1 cut(s)	1048
HpyCH4V	TGCA	3 cut(s)	1009, 1046, 1150
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 323, 879, 1465, 1562
HpyF3I	CTNAG	5 cut(s)	32, 146, 156, 933, 1445
HpySE526I	ACGT	1 cut(s)	1048
Hsp92II	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
HspAI	GCGC	2 cut(s)	1204, 1357
Kzo9I	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
LmnI	GCTCC	3 cut(s)	244, 1429, 1561
Lsp1109I	GCAGC	4 cut(s)	976, 1134, 1226, 1255
LweI	GCATC	4 cut(s)	277, 304, 1033, 1543
MabI	ACCWGGT	1 cut(s)	736
MaeI	CTAG	2 cut(s)	599, 1064
MaeII	ACGT	1 cut(s)	1048
MaeIII	GTNAC	1 cut(s)	301
MalI	GATC	5 cut(s)	753, 948, 1032, 1036, 1574
MboI	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
MflI	RGATCY	2 cut(s)	751, 946
MhlI	GDGCHC	2 cut(s)	582, 1531
MluCI	AATT	6 cut(s)	178, 277, 394, 609, 1350, 1542
MlyI	GAGTC	2 cut(s)	365, 1580
MmeI	TCCRAC	4 cut(s)	147, 321, 423, 1142
MseI	TTAA	5 cut(s)	516, 780, 960, 1227, 1308
MslI	CAYNNNNRTG	1 cut(s)	761
MspA1I	CMGCKG	1 cut(s)	1472
MspCI	CTTAAG	1 cut(s)	779
MspI	CCGG	2 cut(s)	424, 1371
MspR9I	CCNGG	4 cut(s)	50, 424, 425, 738
Mva1269I	GAATGC	1 cut(s)	825
MvaI	CCWGG	2 cut(s)	50, 738
MvnI	CGCG	3 cut(s)	69, 353, 1041
MwoI	GCNNNNNNNGC	5 cut(s)	53, 323, 879, 1465, 1562
NciI	CCSGG	2 cut(s)	424, 425
NdeII	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
NheI	GCTAGC	1 cut(s)	598
NlaIII	CATG	7 cut(s)	832, 873, 909, 946, 1001, 1184, 1499
NlaIV	GGNNCC	2 cut(s)	246, 948
NmeAIII	GCCGAG	2 cut(s)	106, 854
NruI	TCGCGA	1 cut(s)	1041
NspI	RCATGY	1 cut(s)	873
PaeR7I	CTCGAG	1 cut(s)	1272
PcsI	WCGNNNNNNNCGW	1 cut(s)	1045
PctI	GAATGC	1 cut(s)	825
PfeI	GAWTC	5 cut(s)	185, 344, 415, 653, 1511
PkrI	GCNGC	4 cut(s)	991, 1149, 1241, 1270
PleI	GAGTC	2 cut(s)	364, 1580
PpsI	GAGTC	2 cut(s)	364, 1580
PpuMI	RGGWCCY	1 cut(s)	686
PshBI	ATTAAT	1 cut(s)	516
Psp5II	RGGWCCY	1 cut(s)	686
Psp6I	CCWGG	2 cut(s)	48, 736
PspFI	CCCAGC	3 cut(s)	632, 1424, 1454
PspGI	CCWGG	2 cut(s)	48, 736
PspN4I	GGNNCC	2 cut(s)	246, 948
PspPI	GGNCC	3 cut(s)	686, 799, 1368
PspPPI	RGGWCCY	1 cut(s)	686
PspXI	VCTCGAGB	1 cut(s)	1272
PstI	CTGCAG	1 cut(s)	1011
PsuI	RGATCY	2 cut(s)	751, 946
PvuII	CAGCTG	1 cut(s)	1472
RruI	TCGCGA	1 cut(s)	1041
RsaI	GTAC	2 cut(s)	621, 1115
RsaNI	GTAC	2 cut(s)	620, 1114
RseI	CAYNNNNRTG	1 cut(s)	761
SaqAI	TTAA	5 cut(s)	516, 780, 960, 1227, 1308
SatI	GCNGC	4 cut(s)	990, 1148, 1240, 1269
Sau3AI	GATC	5 cut(s)	751, 946, 1030, 1034, 1572
Sau96I	GGNCC	3 cut(s)	686, 799, 1368
SchI	GAGTC	2 cut(s)	365, 1580
ScrFI	CCNGG	4 cut(s)	50, 424, 425, 738
SduI	GDGCHC	2 cut(s)	582, 1531
SexAI	ACCWGGT	1 cut(s)	736
SfaNI	GCATC	4 cut(s)	277, 304, 1033, 1543
SfcI	CTRYAG	2 cut(s)	1007, 1312
Sfr274I	CTCGAG	1 cut(s)	1272
SinI	GGWCC	2 cut(s)	686, 799
SlaI	CTCGAG	1 cut(s)	1272
SmaI	CCCGGG	1 cut(s)	425
SmiMI	CAYNNNNRTG	1 cut(s)	761
SmlI	CTYRAG	2 cut(s)	779, 1272
SmoI	CTYRAG	2 cut(s)	779, 1272
Sse9I	AATT	6 cut(s)	178, 277, 394, 609, 1350, 1542
SsiI	CCGC	5 cut(s)	67, 290, 353, 797, 850
SspMI	CTAG	2 cut(s)	599, 1064
StyD4I	CCNGG	4 cut(s)	48, 422, 423, 736
TaaI	ACNGT	3 cut(s)	384, 408, 449
TaiI	ACGT	1 cut(s)	1051
TaqI	TCGA	7 cut(s)	7, 218, 359, 551, 1017, 1033, 1273
TasI	AATT	6 cut(s)	178, 277, 394, 609, 1350, 1542
TatI	WGTACW	2 cut(s)	619, 1113
TfiI	GAWTC	5 cut(s)	185, 344, 415, 653, 1511
Tru1I	TTAA	5 cut(s)	516, 780, 960, 1227, 1308
Tru9I	TTAA	5 cut(s)	516, 780, 960, 1227, 1308
TscAI	CASTG	5 cut(s)	289, 376, 389, 904, 1366
TseI	GCWGC	4 cut(s)	989, 1147, 1239, 1268
TspDTI	ATGAA	4 cut(s)	336, 822, 911, 931
TspMI	CCCGGG	1 cut(s)	423
TspRI	CASTG	5 cut(s)	289, 376, 389, 904, 1366
Vha464I	CTTAAG	1 cut(s)	779
VpaK11BI	GGWCC	2 cut(s)	686, 799
VspI	ATTAAT	1 cut(s)	516
XapI	RAATTY	4 cut(s)	178, 394, 609, 1542
XceI	RCATGY	1 cut(s)	873
XhoI	CTCGAG	1 cut(s)	1272
XmaI	CCCGGG	1 cut(s)	423
XspI	CTAG	2 cut(s)	599, 1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.