acyl-activating enzyme
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AMP-binding | PF00501 | 1 - 312 | 5.3e-45 | AMP-binding enzyme |
| AMP-binding_C | PF13193 | 379 - 456 | 3.2e-09 | AMP-binding enzyme C-terminal domain |
| PQQ_2 | PF13360 | 671 - 794 | 2.4e-08 | Outer membrane protein assembly factor BamB |
| Beta-prop_ACSF4 | PF13570 | 678 - 987 | 2.4e-88 | Beta-alanine-activating enzyme, beta-propeller |
| PQQ_2 | PF13360 | 820 - 977 | 4.3e-10 | Outer membrane protein assembly factor BamB |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1232, 1334, 2385 |
| AarI | CACCTGC | 2 cut(s) | 149, 1902 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1017 |
| Acc36I | ACCTGC | 2 cut(s) | 149, 1902 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 395, 1862, 2151, 2420, 2564 |
| AccI | GTMKAC | 1 cut(s) | 835 |
| AccIII | TCCGGA | 1 cut(s) | 2906 |
| AciI | CCGC | 4 cut(s) | 5, 51, 663, 1096 |
| AclWI | GGATC | 6 cut(s) | 2031, 2044, 2107, 2656, 2801, 2814 |
| AcoI | YGGCCR | 4 cut(s) | 83, 117, 1321, 1968 |
| AcsI | RAATTY | 6 cut(s) | 452, 646, 897, 1537, 2965, 2981 |
| AcuI | CTGAAG | 2 cut(s) | 1515, 1824 |
| AcyI | GRCGYC | 1 cut(s) | 149 |
| AfaI | GTAC | 7 cut(s) | 299, 745, 766, 882, 1849, 1879, 2727 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 395, 845, 1862, 2151, 2420, 2564, 2848, 3017 |
| AflIII | ACRYGT | 2 cut(s) | 1710, 2173 |
| AhlI | ACTAGT | 2 cut(s) | 1358, 1850 |
| AjiI | CACGTC | 1 cut(s) | 2174 |
| AjnI | CCWGG | 3 cut(s) | 80, 1318, 2250 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2901, 2933 |
| Alw21I | GWGCWC | 1 cut(s) | 2841 |
| Alw26I | GTCTC | 8 cut(s) | 31, 271, 612, 797, 803, 917, 2442, 2574 |
| AlwI | GGATC | 6 cut(s) | 2031, 2044, 2107, 2656, 2801, 2814 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 97, 986 |
| Aor13HI | TCCGGA | 1 cut(s) | 2906 |
| AoxI | GGCC | 8 cut(s) | 83, 117, 1321, 1470, 1968, 2074, 2488, 2678 |
| ApeKI | GCWGC | 7 cut(s) | 97, 628, 1117, 1178, 1547, 1550, 2189 |
| ApoI | RAATTY | 6 cut(s) | 452, 646, 897, 1537, 2965, 2981 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 709, 741 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 521, 1344, 2140 |
| AspLEI | GCGC | 1 cut(s) | 2377 |
| AspS9I | GGNCC | 5 cut(s) | 73, 127, 717, 1093, 2678 |
| AsuHPI | GGTGA | 6 cut(s) | 130, 770, 1052, 2046, 2213, 2309 |
| AvaII | GGWCC | 4 cut(s) | 73, 127, 717, 1093 |
| BalI | TGGCCA | 2 cut(s) | 85, 1323 |
| BamHI | GGATCC | 2 cut(s) | 2036, 2806 |
| BanII | GRGCYC | 1 cut(s) | 311 |
| BbsI | GAAGAC | 1 cut(s) | 1255 |
| Bbv12I | GWGCWC | 1 cut(s) | 2841 |
| BbvI | GCAGC | 7 cut(s) | 84, 640, 1129, 1165, 1534, 1537, 2201 |
| BceAI | ACGGC | 2 cut(s) | 136, 2529 |
| BciT130I | CCWGG | 3 cut(s) | 82, 1320, 2252 |
| BciVI | GTATCC | 3 cut(s) | 152, 396, 923 |
| BclI | TGATCA | 2 cut(s) | 439, 2857 |
| BcoDI | GTCTC | 8 cut(s) | 31, 271, 612, 797, 803, 917, 2442, 2574 |
| BcuI | ACTAGT | 2 cut(s) | 1358, 1850 |
| BfaI | CTAG | 6 cut(s) | 1359, 1403, 1634, 1737, 1851, 2378 |
| BfmI | CTRYAG | 2 cut(s) | 542, 840 |
| BfuAI | ACCTGC | 2 cut(s) | 149, 1902 |
| BfuI | GTATCC | 3 cut(s) | 152, 396, 923 |
| BglII | AGATCT | 1 cut(s) | 1268 |
| BlpI | GCTNAGC | 1 cut(s) | 659 |
| BmcAI | AGTACT | 2 cut(s) | 1849, 1879 |
| Bme1390I | CCNGG | 3 cut(s) | 82, 1320, 2252 |
| Bme18I | GGWCC | 4 cut(s) | 73, 127, 717, 1093 |
| BmgBI | CACGTC | 1 cut(s) | 2174 |
| BmgT120I | GGNCC | 5 cut(s) | 73, 127, 717, 1093, 2678 |
| BmiI | GGNNCC | 5 cut(s) | 75, 2038, 2143, 2695, 2808 |
| BmrFI | CCNGG | 3 cut(s) | 82, 1320, 2252 |
| BmsI | GCATC | 5 cut(s) | 363, 1165, 2060, 2216, 2929 |
| BpiI | GAAGAC | 1 cut(s) | 1255 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2769, 2801 |
| BpmI | CTGGAG | 4 cut(s) | 963, 2505, 2712, 2994 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2843 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 659 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1959 |
| BsaHI | GRCGYC | 1 cut(s) | 149 |
| BsaI | GGTCTC | 3 cut(s) | 917, 2442, 2574 |
| BsaJI | CCNNGG | 2 cut(s) | 713, 1871 |
| BsaWI | WCCGGW | 2 cut(s) | 995, 2906 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 395, 845, 1862, 2151, 2420, 2564, 2848, 3017 |
| Bse118I | RCCGGY | 2 cut(s) | 1970, 2314 |
| Bse1I | ACTGG | 6 cut(s) | 478, 1311, 2149, 2488, 2558, 3011 |
| Bse3DI | GCAATG | 3 cut(s) | 925, 1317, 2392 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1959 |
| BseAI | TCCGGA | 1 cut(s) | 2906 |
| BseBI | CCWGG | 3 cut(s) | 82, 1320, 2252 |
| BseDI | CCNNGG | 2 cut(s) | 713, 1871 |
| BseGI | GGATG | 7 cut(s) | 378, 1159, 1293, 2145, 2231, 2623, 2944 |
| BseJI | GATNNNNATC | 1 cut(s) | 1959 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 395, 845, 1862, 2151, 2420, 2564, 2848, 3017 |
| BseMI | GCAATG | 3 cut(s) | 925, 1317, 2392 |
| BseMII | CTCAG | 3 cut(s) | 1923, 2225, 2834 |
| BseNI | ACTGG | 6 cut(s) | 478, 1311, 2149, 2488, 2558, 3011 |
| BseRI | GAGGAG | 2 cut(s) | 267, 416 |
| BseXI | GCAGC | 7 cut(s) | 84, 640, 1129, 1165, 1534, 1537, 2201 |
| BseYI | CCCAGC | 1 cut(s) | 2675 |
| BsgI | GTGCAG | 3 cut(s) | 127, 1536, 2024 |
| BshFI | GGCC | 8 cut(s) | 85, 119, 1323, 1472, 1970, 2076, 2490, 2680 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2841 |
| BsiSI | CCGG | 4 cut(s) | 996, 1971, 2315, 2907 |
| BslFI | GGGAC | 2 cut(s) | 1170, 1970 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 395, 845, 1862, 2151, 2420, 2564, 2848, 3017 |
| BsmAI | GTCTC | 8 cut(s) | 31, 271, 612, 797, 803, 917, 2442, 2574 |
| BsmBI | CGTCTC | 1 cut(s) | 803 |
| BsmFI | GGGAC | 2 cut(s) | 1170, 1970 |
| BsmI | GAATGC | 1 cut(s) | 2516 |
| BsnI | GGCC | 8 cut(s) | 85, 119, 1323, 1472, 1970, 2076, 2490, 2680 |
| Bso31I | GGTCTC | 3 cut(s) | 917, 2442, 2574 |
| Bsp1286I | GDGCHC | 2 cut(s) | 311, 2841 |
| Bsp13I | TCCGGA | 1 cut(s) | 2906 |
| Bsp1407I | TGTACA | 2 cut(s) | 297, 764 |
| Bsp143I | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 659 |
| Bsp19I | CCATGG | 1 cut(s) | 1871 |
| BspACI | CCGC | 4 cut(s) | 5, 51, 663, 1096 |
| BspANI | GGCC | 8 cut(s) | 85, 119, 1323, 1472, 1970, 2076, 2490, 2680 |
| BspCNI | CTCAG | 3 cut(s) | 1924, 2224, 2835 |
| BspEI | TCCGGA | 1 cut(s) | 2906 |
| BspLI | GGNNCC | 5 cut(s) | 75, 2038, 2143, 2695, 2808 |
| BspMI | ACCTGC | 2 cut(s) | 149, 1902 |
| BspPI | GGATC | 6 cut(s) | 2031, 2044, 2107, 2656, 2801, 2814 |
| BspQI | GCTCTTC | 2 cut(s) | 1635, 2718 |
| BspTNI | GGTCTC | 3 cut(s) | 917, 2442, 2574 |
| BsrDI | GCAATG | 3 cut(s) | 925, 1317, 2392 |
| BsrFI | RCCGGY | 2 cut(s) | 1970, 2314 |
| BsrGI | TGTACA | 2 cut(s) | 297, 764 |
| BsrI | ACTGG | 6 cut(s) | 478, 1311, 2149, 2488, 2558, 3011 |
| BssAI | RCCGGY | 2 cut(s) | 1970, 2314 |
| BssECI | CCNNGG | 2 cut(s) | 713, 1871 |
| BssMI | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| BssNAI | GTATAC | 1 cut(s) | 836 |
| BssNI | GRCGYC | 1 cut(s) | 149 |
| BssT1I | CCWWGG | 2 cut(s) | 713, 1871 |
| Bst1107I | GTATAC | 1 cut(s) | 836 |
| Bst2UI | CCWGG | 3 cut(s) | 82, 1320, 2252 |
| Bst4CI | ACNGT | 8 cut(s) | 241, 282, 699, 967, 1758, 1882, 1940, 2327 |
| Bst6I | CTCTTC | 3 cut(s) | 1491, 1635, 2718 |
| BstACI | GRCGYC | 1 cut(s) | 149 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1559 |
| BstAUI | TGTACA | 2 cut(s) | 297, 764 |
| BstC8I | GCNNGC | 1 cut(s) | 2698 |
| BstDEI | CTNAG | 6 cut(s) | 458, 659, 1614, 1932, 2211, 2843 |
| BstDSI | CCRYGG | 1 cut(s) | 1871 |
| BstF5I | GGATG | 7 cut(s) | 378, 1159, 1293, 2145, 2231, 2623, 2944 |
| BstHHI | GCGC | 1 cut(s) | 2377 |
| BstKTI | GATC | 8 cut(s) | 442, 1271, 2039, 2102, 2343, 2651, 2809, 2860 |
| BstMAI | GTCTC | 8 cut(s) | 31, 271, 612, 797, 803, 917, 2442, 2574 |
| BstMBI | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 201, 1114, 1385, 1423, 1559, 2910 |
| BstNI | CCWGG | 3 cut(s) | 82, 1320, 2252 |
| BstNSI | RCATGY | 3 cut(s) | 1714, 1897, 2627 |
| BstSCI | CCNGG | 3 cut(s) | 80, 1318, 2250 |
| BstSFI | CTRYAG | 2 cut(s) | 542, 840 |
| BstV1I | GCAGC | 7 cut(s) | 84, 640, 1129, 1165, 1534, 1537, 2201 |
| BstV2I | GAAGAC | 1 cut(s) | 1255 |
| BstX2I | RGATCY | 4 cut(s) | 1268, 2036, 2648, 2806 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2294 |
| BstYI | RGATCY | 4 cut(s) | 1268, 2036, 2648, 2806 |
| BstZ17I | GTATAC | 1 cut(s) | 836 |
| BsuI | GTATCC | 3 cut(s) | 152, 396, 923 |
| BsuRI | GGCC | 8 cut(s) | 85, 119, 1323, 1472, 1970, 2076, 2490, 2680 |
| BtgI | CCRYGG | 1 cut(s) | 1871 |
| BtrI | CACGTC | 1 cut(s) | 2174 |
| BtsCI | GGATG | 7 cut(s) | 378, 1159, 1293, 2145, 2231, 2623, 2944 |
| BtsI | GCAGTG | 1 cut(s) | 1072 |
| BtsIMutI | CAGTG | 6 cut(s) | 246, 581, 641, 1072, 1304, 2156 |
| BveI | ACCTGC | 2 cut(s) | 149, 1902 |
| Cac8I | GCNNGC | 1 cut(s) | 2698 |
| CaiI | CAGNNNCTG | 2 cut(s) | 97, 986 |
| CfoI | GCGC | 1 cut(s) | 2377 |
| Cfr10I | RCCGGY | 2 cut(s) | 1970, 2314 |
| Cfr13I | GGNCC | 5 cut(s) | 73, 127, 717, 1093, 2678 |
| CseI | GACGC | 3 cut(s) | 157, 820, 2057 |
| Csp6I | GTAC | 7 cut(s) | 298, 744, 765, 881, 1848, 1878, 2726 |
| CviQI | GTAC | 7 cut(s) | 298, 744, 765, 881, 1848, 1878, 2726 |
| DdeI | CTNAG | 6 cut(s) | 458, 659, 1614, 1932, 2211, 2843 |
| DpnI | GATC | 8 cut(s) | 441, 1270, 2038, 2101, 2342, 2650, 2808, 2859 |
| DpnII | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1017 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1017 |
| EaeI | YGGCCR | 4 cut(s) | 83, 117, 1321, 1968 |
| Eam1104I | CTCTTC | 3 cut(s) | 1491, 1635, 2718 |
| EarI | CTCTTC | 3 cut(s) | 1491, 1635, 2718 |
| Eco130I | CCWWGG | 2 cut(s) | 713, 1871 |
| Eco147I | AGGCCT | 1 cut(s) | 1472 |
| Eco24I | GRGCYC | 1 cut(s) | 311 |
| Eco31I | GGTCTC | 3 cut(s) | 917, 2442, 2574 |
| Eco32I | GATATC | 1 cut(s) | 2083 |
| Eco47I | GGWCC | 4 cut(s) | 73, 127, 717, 1093 |
| Eco57I | CTGAAG | 2 cut(s) | 1515, 1824 |
| EcoO109I | RGGNCCY | 1 cut(s) | 717 |
| EcoRII | CCWGG | 3 cut(s) | 80, 1318, 2250 |
| EcoRV | GATATC | 1 cut(s) | 2083 |
| EcoT14I | CCWWGG | 2 cut(s) | 713, 1871 |
| EcoT22I | ATGCAT | 1 cut(s) | 1895 |
| EcoT38I | GRGCYC | 1 cut(s) | 311 |
| ErhI | CCWWGG | 2 cut(s) | 713, 1871 |
| Esp3I | CGTCTC | 1 cut(s) | 803 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 441, 473, 1194, 1226, 1410, 1442 |
| FaqI | GGGAC | 2 cut(s) | 1170, 1970 |
| FauNDI | CATATG | 2 cut(s) | 2273, 2356 |
| FbaI | TGATCA | 2 cut(s) | 439, 2857 |
| FblI | GTMKAC | 1 cut(s) | 835 |
| FokI | GGATG | 7 cut(s) | 385, 1146, 1300, 2132, 2238, 2630, 2951 |
| FriOI | GRGCYC | 1 cut(s) | 311 |
| FspBI | CTAG | 6 cut(s) | 1359, 1403, 1634, 1737, 1851, 2378 |
| GlaI | GCGC | 1 cut(s) | 2376 |
| GsaI | CCCAGC | 1 cut(s) | 2679 |
| GsuI | CTGGAG | 4 cut(s) | 963, 2505, 2712, 2994 |
| HaeIII | GGCC | 8 cut(s) | 85, 119, 1323, 1472, 1970, 2076, 2490, 2680 |
| HapII | CCGG | 4 cut(s) | 996, 1971, 2315, 2907 |
| HgaI | GACGC | 3 cut(s) | 157, 820, 2057 |
| HhaI | GCGC | 1 cut(s) | 2377 |
| Hin1I | GRCGYC | 1 cut(s) | 149 |
| Hin6I | GCGC | 1 cut(s) | 2375 |
| HinP1I | GCGC | 1 cut(s) | 2375 |
| HincII | GTYRAC | 5 cut(s) | 1294, 1372, 2029, 2047, 2330 |
| HindII | GTYRAC | 5 cut(s) | 1294, 1372, 2029, 2047, 2330 |
| HindIII | AAGCTT | 2 cut(s) | 430, 1616 |
| HpaII | CCGG | 4 cut(s) | 996, 1971, 2315, 2907 |
| HphI | GGTGA | 6 cut(s) | 130, 770, 1052, 2046, 2213, 2309 |
| Hpy188I | TCNGA | 9 cut(s) | 940, 1268, 1507, 1684, 1843, 1933, 2589, 2857, 2922 |
| Hpy99I | CGWCG | 4 cut(s) | 13, 110, 151, 316 |
| HpyAV | CCTTC | 7 cut(s) | 608, 884, 1080, 1084, 1770, 2162, 2942 |
| HpyCH4III | ACNGT | 8 cut(s) | 241, 282, 699, 967, 1758, 1882, 1940, 2327 |
| HpyCH4IV | ACGT | 2 cut(s) | 2173, 2291 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 201, 1114, 1385, 1423, 1559, 2910 |
| HpyF3I | CTNAG | 6 cut(s) | 458, 659, 1614, 1932, 2211, 2843 |
| HpySE526I | ACGT | 2 cut(s) | 2173, 2291 |
| Hsp92I | GRCGYC | 1 cut(s) | 149 |
| HspAI | GCGC | 1 cut(s) | 2375 |
| Kpn2I | TCCGGA | 1 cut(s) | 2906 |
| Ksp22I | TGATCA | 2 cut(s) | 439, 2857 |
| Kzo9I | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| LguI | GCTCTTC | 2 cut(s) | 1635, 2718 |
| LmnI | GCTCC | 2 cut(s) | 2693, 2909 |
| Lsp1109I | GCAGC | 7 cut(s) | 84, 640, 1129, 1165, 1534, 1537, 2201 |
| LweI | GCATC | 5 cut(s) | 363, 1165, 2060, 2216, 2929 |
| MaeI | CTAG | 6 cut(s) | 1359, 1403, 1634, 1737, 1851, 2378 |
| MaeII | ACGT | 2 cut(s) | 2173, 2291 |
| MaeIII | GTNAC | 7 cut(s) | 235, 1067, 1168, 2157, 2201, 2267, 2307 |
| MalI | GATC | 8 cut(s) | 441, 1270, 2038, 2101, 2342, 2650, 2808, 2859 |
| MboI | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| MboII | GAAGA | 9 cut(s) | 1145, 1260, 1263, 1508, 1622, 2024, 2251, 2697, 2705 |
| MfeI | CAATTG | 4 cut(s) | 175, 196, 828, 2336 |
| MflI | RGATCY | 4 cut(s) | 1268, 2036, 2648, 2806 |
| MhlI | GDGCHC | 2 cut(s) | 311, 2841 |
| MlsI | TGGCCA | 2 cut(s) | 85, 1323 |
| MluNI | TGGCCA | 2 cut(s) | 85, 1323 |
| MlyI | GAGTC | 2 cut(s) | 164, 239 |
| MmeI | TCCRAC | 5 cut(s) | 1265, 1628, 1989, 2203, 2258 |
| Mox20I | TGGCCA | 2 cut(s) | 85, 1323 |
| Mph1103I | ATGCAT | 1 cut(s) | 1895 |
| MroI | TCCGGA | 1 cut(s) | 2906 |
| MroXI | GAANNNNTTC | 3 cut(s) | 521, 1344, 2140 |
| MscI | TGGCCA | 2 cut(s) | 85, 1323 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1065, 1164, 2397 |
| Msp20I | TGGCCA | 2 cut(s) | 85, 1323 |
| MspA1I | CMGCKG | 1 cut(s) | 572 |
| MspI | CCGG | 4 cut(s) | 996, 1971, 2315, 2907 |
| MspR9I | CCNGG | 3 cut(s) | 82, 1320, 2252 |
| MunI | CAATTG | 4 cut(s) | 175, 196, 828, 2336 |
| Mva1269I | GAATGC | 1 cut(s) | 2516 |
| MvaI | CCWGG | 3 cut(s) | 82, 1320, 2252 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 201, 1114, 1385, 1423, 1559, 2910 |
| NcoI | CCATGG | 1 cut(s) | 1871 |
| NdeI | CATATG | 2 cut(s) | 2273, 2356 |
| NdeII | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| NlaIV | GGNNCC | 5 cut(s) | 75, 2038, 2143, 2695, 2808 |
| NmuCI | GTSAC | 4 cut(s) | 235, 1067, 2201, 2307 |
| NsiI | ATGCAT | 1 cut(s) | 1895 |
| NspI | RCATGY | 3 cut(s) | 1714, 1897, 2627 |
| PaqCI | CACCTGC | 2 cut(s) | 149, 1902 |
| PceI | AGGCCT | 1 cut(s) | 1472 |
| PciI | ACATGT | 1 cut(s) | 1710 |
| PciSI | GCTCTTC | 2 cut(s) | 1635, 2718 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 320, 2519, 3024 |
| PctI | GAATGC | 1 cut(s) | 2516 |
| PdmI | GAANNNNTTC | 3 cut(s) | 521, 1344, 2140 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 395, 1862, 2151, 2420, 2564 |
| PfoI | TCCNGGA | 1 cut(s) | 2250 |
| PleI | GAGTC | 2 cut(s) | 164, 238 |
| PpsI | GAGTC | 2 cut(s) | 164, 238 |
| PpuMI | RGGWCCY | 1 cut(s) | 717 |
| PscI | ACATGT | 1 cut(s) | 1710 |
| PsiI | TTATAA | 3 cut(s) | 1232, 1334, 2385 |
| Psp5II | RGGWCCY | 1 cut(s) | 717 |
| Psp6I | CCWGG | 3 cut(s) | 80, 1318, 2250 |
| PspFI | CCCAGC | 1 cut(s) | 2675 |
| PspGI | CCWGG | 3 cut(s) | 80, 1318, 2250 |
| PspN4I | GGNNCC | 5 cut(s) | 75, 2038, 2143, 2695, 2808 |
| PspPI | GGNCC | 5 cut(s) | 73, 127, 717, 1093, 2678 |
| PspPPI | RGGWCCY | 1 cut(s) | 717 |
| PstNI | CAGNNNCTG | 2 cut(s) | 97, 986 |
| PsuI | RGATCY | 4 cut(s) | 1268, 2036, 2648, 2806 |
| PvuII | CAGCTG | 1 cut(s) | 572 |
| RsaI | GTAC | 7 cut(s) | 299, 745, 766, 882, 1849, 1879, 2727 |
| RsaNI | GTAC | 7 cut(s) | 298, 744, 765, 881, 1848, 1878, 2726 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1065, 1164, 2397 |
| SapI | GCTCTTC | 2 cut(s) | 1635, 2718 |
| Sau3AI | GATC | 8 cut(s) | 439, 1268, 2036, 2099, 2340, 2648, 2806, 2857 |
| Sau96I | GGNCC | 5 cut(s) | 73, 127, 717, 1093, 2678 |
| ScaI | AGTACT | 2 cut(s) | 1849, 1879 |
| SchI | GAGTC | 2 cut(s) | 164, 239 |
| ScrFI | CCNGG | 3 cut(s) | 82, 1320, 2252 |
| SduI | GDGCHC | 2 cut(s) | 311, 2841 |
| SfaNI | GCATC | 5 cut(s) | 363, 1165, 2060, 2216, 2929 |
| SfcI | CTRYAG | 2 cut(s) | 542, 840 |
| SinI | GGWCC | 4 cut(s) | 73, 127, 717, 1093 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1065, 1164, 2397 |
| SmlI | CTYRAG | 1 cut(s) | 182 |
| SmoI | CTYRAG | 1 cut(s) | 182 |
| SpeI | ACTAGT | 2 cut(s) | 1358, 1850 |
| SseBI | AGGCCT | 1 cut(s) | 1472 |
| SsiI | CCGC | 4 cut(s) | 5, 51, 663, 1096 |
| SspI | AATATT | 2 cut(s) | 1263, 2599 |
| SspMI | CTAG | 6 cut(s) | 1359, 1403, 1634, 1737, 1851, 2378 |
| StuI | AGGCCT | 1 cut(s) | 1472 |
| StyD4I | CCNGG | 3 cut(s) | 80, 1318, 2250 |
| StyI | CCWWGG | 2 cut(s) | 713, 1871 |
| TaaI | ACNGT | 8 cut(s) | 241, 282, 699, 967, 1758, 1882, 1940, 2327 |
| TaiI | ACGT | 2 cut(s) | 2176, 2294 |
| TaqI | TCGA | 6 cut(s) | 311, 367, 534, 2166, 2528, 2832 |
| TatI | WGTACW | 5 cut(s) | 297, 764, 880, 1847, 1877 |
| TauI | GCSGC | 3 cut(s) | 7, 54, 666 |
| TscAI | CASTG | 6 cut(s) | 246, 588, 648, 1072, 1311, 2156 |
| TseFI | GTSAC | 4 cut(s) | 235, 1067, 2201, 2307 |
| TseI | GCWGC | 7 cut(s) | 97, 628, 1117, 1178, 1547, 1550, 2189 |
| Tsp45I | GTSAC | 4 cut(s) | 235, 1067, 2201, 2307 |
| TspGWI | ACGGA | 4 cut(s) | 19, 94, 761, 1023 |
| TspRI | CASTG | 6 cut(s) | 246, 588, 648, 1072, 1311, 2156 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 395, 1862, 2151, 2420, 2564 |
| VpaK11BI | GGWCC | 4 cut(s) | 73, 127, 717, 1093 |
| XapI | RAATTY | 6 cut(s) | 452, 646, 897, 1537, 2965, 2981 |
| XbaI | TCTAGA | 1 cut(s) | 1633 |
| XceI | RCATGY | 3 cut(s) | 1714, 1897, 2627 |
| XmiI | GTMKAC | 1 cut(s) | 835 |
| XmnI | GAANNNNTTC | 3 cut(s) | 521, 1344, 2140 |
| XspI | CTAG | 6 cut(s) | 1359, 1403, 1634, 1737, 1851, 2378 |
| ZrmI | AGTACT | 2 cut(s) | 1849, 1879 |
| Zsp2I | ATGCAT | 1 cut(s) | 1895 |