acyl-activating enzyme
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AMP-binding | PF00501 | 36 - 350 | 4.1e-46 | AMP-binding enzyme |
| AMP-binding_C | PF13193 | 417 - 494 | 6.5e-10 | AMP-binding enzyme C-terminal domain |
| PQQ_2 | PF13360 | 709 - 832 | 2e-08 | Outer membrane protein assembly factor BamB |
| Beta-prop_ACSF4 | PF13570 | 716 - 941 | 1.2e-75 | Beta-alanine-activating enzyme, beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1346, 1448, 2499 |
| AarI | CACCTGC | 2 cut(s) | 410, 2016 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1131 |
| Acc36I | ACCTGC | 2 cut(s) | 410, 2016 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| AccBSI | CCGCTC | 1 cut(s) | 147 |
| AccI | GTMKAC | 2 cut(s) | 387, 1469 |
| AccII | CGCG | 1 cut(s) | 47 |
| AclWI | GGATC | 6 cut(s) | 329, 342, 2145, 2158, 2221, 2770 |
| AcoI | YGGCCR | 3 cut(s) | 344, 378, 1435 |
| AcsI | RAATTY | 4 cut(s) | 246, 451, 716, 910 |
| AcuI | CTGAAG | 2 cut(s) | 1632, 1938 |
| AcyI | GRCGYC | 1 cut(s) | 410 |
| AfaI | GTAC | 4 cut(s) | 158, 563, 1030, 1963 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| AflIII | ACRYGT | 3 cut(s) | 1824, 2012, 2287 |
| AhlI | ACTAGT | 1 cut(s) | 1964 |
| AjiI | CACGTC | 1 cut(s) | 2288 |
| AjnI | CCWGG | 5 cut(s) | 341, 1432, 2057, 2190, 2364 |
| AleI | CACNNNNGTG | 1 cut(s) | 1013 |
| Alw21I | GWGCWC | 3 cut(s) | 237, 297, 1010 |
| Alw26I | GTCTC | 5 cut(s) | 292, 876, 1061, 1067, 2688 |
| AlwI | GGATC | 6 cut(s) | 329, 342, 2145, 2158, 2221, 2770 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 358 |
| AoxI | GGCC | 7 cut(s) | 344, 378, 1435, 1584, 2188, 2602, 2792 |
| ApeKI | GCWGC | 9 cut(s) | 196, 358, 520, 686, 892, 1231, 1664, 1667, 2303 |
| ApoI | RAATTY | 4 cut(s) | 246, 451, 716, 910 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 57, 89, 973, 1005 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 785, 1458, 2254 |
| AspLEI | GCGC | 1 cut(s) | 2491 |
| AspS9I | GGNCC | 4 cut(s) | 981, 1207, 2550, 2792 |
| AvaII | GGWCC | 3 cut(s) | 981, 1207, 2550 |
| BalI | TGGCCA | 2 cut(s) | 346, 1437 |
| BamHI | GGATCC | 2 cut(s) | 334, 2150 |
| BanII | GRGCYC | 2 cut(s) | 237, 575 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 38 |
| BbsI | GAAGAC | 1 cut(s) | 1369 |
| Bbv12I | GWGCWC | 3 cut(s) | 237, 297, 1010 |
| BbvI | GCAGC | 9 cut(s) | 208, 345, 532, 698, 904, 1243, 1651, 1654, 2315 |
| BceAI | ACGGC | 5 cut(s) | 84, 161, 253, 397, 2643 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 185, 219 |
| BciT130I | CCWGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| BciVI | GTATCC | 2 cut(s) | 660, 1992 |
| BclI | TGATCA | 1 cut(s) | 703 |
| BcoDI | GTCTC | 5 cut(s) | 292, 876, 1061, 1067, 2688 |
| BcuI | ACTAGT | 1 cut(s) | 1964 |
| BfaI | CTAG | 7 cut(s) | 1751, 1851, 1887, 1965, 2085, 2492, 2849 |
| BfmI | CTRYAG | 1 cut(s) | 806 |
| BfuAI | ACCTGC | 2 cut(s) | 410, 2016 |
| BfuI | GTATCC | 2 cut(s) | 660, 1992 |
| BglII | AGATCT | 1 cut(s) | 1382 |
| BlpI | GCTNAGC | 1 cut(s) | 923 |
| BmcAI | AGTACT | 1 cut(s) | 1963 |
| Bme1390I | CCNGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| Bme18I | GGWCC | 3 cut(s) | 981, 1207, 2550 |
| BmgBI | CACGTC | 1 cut(s) | 2288 |
| BmgT120I | GGNCC | 4 cut(s) | 981, 1207, 2550, 2792 |
| BmiI | GGNNCC | 7 cut(s) | 336, 2056, 2152, 2257, 2551, 2552, 2809 |
| BmrFI | CCNGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| BmsI | GCATC | 4 cut(s) | 627, 1279, 2174, 2330 |
| BpiI | GAAGAC | 1 cut(s) | 1369 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 155, 187 |
| BpmI | CTGGAG | 2 cut(s) | 2619, 2826 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 923 |
| BsaAI | YACGTR | 1 cut(s) | 156 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1980 |
| BsaHI | GRCGYC | 1 cut(s) | 410 |
| BsaI | GGTCTC | 1 cut(s) | 2688 |
| BsaJI | CCNNGG | 4 cut(s) | 480, 977, 1985, 2058 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| Bse118I | RCCGGY | 1 cut(s) | 1420 |
| Bse1I | ACTGG | 8 cut(s) | 742, 1110, 1156, 1480, 2263, 2429, 2602, 2672 |
| Bse3DI | GCAATG | 2 cut(s) | 1431, 2506 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1980 |
| BseBI | CCWGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| BseDI | CCNNGG | 4 cut(s) | 480, 977, 1985, 2058 |
| BseGI | GGATG | 6 cut(s) | 642, 1273, 1407, 2259, 2345, 2737 |
| BseJI | GATNNNNATC | 1 cut(s) | 1980 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| BseMI | GCAATG | 2 cut(s) | 1431, 2506 |
| BseMII | CTCAG | 3 cut(s) | 243, 250, 2339 |
| BseNI | ACTGG | 8 cut(s) | 742, 1110, 1156, 1480, 2263, 2429, 2602, 2672 |
| BseRI | GAGGAG | 1 cut(s) | 680 |
| BseXI | GCAGC | 9 cut(s) | 208, 345, 532, 698, 904, 1243, 1651, 1654, 2315 |
| BseYI | CCCAGC | 1 cut(s) | 2789 |
| BsgI | GTGCAG | 2 cut(s) | 388, 1653 |
| Bsh1236I | CGCG | 1 cut(s) | 47 |
| Bsh1285I | CGRYCG | 1 cut(s) | 145 |
| BshFI | GGCC | 7 cut(s) | 346, 380, 1437, 1586, 2190, 2604, 2794 |
| BsiEI | CGRYCG | 1 cut(s) | 145 |
| BsiHKAI | GWGCWC | 3 cut(s) | 237, 297, 1010 |
| BsiSI | CCGG | 1 cut(s) | 1421 |
| BsiWI | CGTACG | 1 cut(s) | 156 |
| BslFI | GGGAC | 3 cut(s) | 34, 2084, 2536 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| BsmAI | GTCTC | 5 cut(s) | 292, 876, 1061, 1067, 2688 |
| BsmBI | CGTCTC | 1 cut(s) | 1067 |
| BsmFI | GGGAC | 3 cut(s) | 34, 2084, 2536 |
| BsmI | GAATGC | 1 cut(s) | 2630 |
| BsnI | GGCC | 7 cut(s) | 346, 380, 1437, 1586, 2190, 2604, 2794 |
| Bso31I | GGTCTC | 1 cut(s) | 2688 |
| Bsp1286I | GDGCHC | 4 cut(s) | 237, 297, 575, 1010 |
| Bsp1407I | TGTACA | 2 cut(s) | 561, 1028 |
| Bsp143I | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 923 |
| Bsp19I | CCATGG | 2 cut(s) | 480, 1985 |
| BspANI | GGCC | 7 cut(s) | 346, 380, 1437, 1586, 2190, 2604, 2794 |
| BspCNI | CTCAG | 3 cut(s) | 242, 249, 2338 |
| BspFNI | CGCG | 1 cut(s) | 47 |
| BspLI | GGNNCC | 7 cut(s) | 336, 2056, 2152, 2257, 2551, 2552, 2809 |
| BspMI | ACCTGC | 2 cut(s) | 410, 2016 |
| BspPI | GGATC | 6 cut(s) | 329, 342, 2145, 2158, 2221, 2770 |
| BspQI | GCTCTTC | 2 cut(s) | 1752, 2832 |
| BspTNI | GGTCTC | 1 cut(s) | 2688 |
| BsrBI | CCGCTC | 1 cut(s) | 147 |
| BsrDI | GCAATG | 2 cut(s) | 1431, 2506 |
| BsrFI | RCCGGY | 1 cut(s) | 1420 |
| BsrGI | TGTACA | 2 cut(s) | 561, 1028 |
| BsrI | ACTGG | 8 cut(s) | 742, 1110, 1156, 1480, 2263, 2429, 2602, 2672 |
| BssAI | RCCGGY | 1 cut(s) | 1420 |
| BssECI | CCNNGG | 4 cut(s) | 480, 977, 1985, 2058 |
| BssMI | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| BssNI | GRCGYC | 1 cut(s) | 410 |
| BssT1I | CCWWGG | 3 cut(s) | 480, 977, 1985 |
| Bst2UI | CCWGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| Bst4CI | ACNGT | 4 cut(s) | 121, 505, 1872, 2441 |
| Bst6I | CTCTTC | 3 cut(s) | 1608, 1752, 2832 |
| BstACI | GRCGYC | 1 cut(s) | 410 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1676 |
| BstAUI | TGTACA | 2 cut(s) | 561, 1028 |
| BstBAI | YACGTR | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 1 cut(s) | 2812 |
| BstDEI | CTNAG | 7 cut(s) | 229, 236, 722, 923, 1731, 2325, 2968 |
| BstDSI | CCRYGG | 2 cut(s) | 480, 1985 |
| BstEII | GGTNACC | 1 cut(s) | 89 |
| BstF5I | GGATG | 6 cut(s) | 642, 1273, 1407, 2259, 2345, 2737 |
| BstFNI | CGCG | 1 cut(s) | 47 |
| BstHHI | GCGC | 1 cut(s) | 2491 |
| BstKTI | GATC | 7 cut(s) | 337, 706, 1385, 2153, 2216, 2457, 2765 |
| BstMAI | GTCTC | 5 cut(s) | 292, 876, 1061, 1067, 2688 |
| BstMBI | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| BstMCI | CGRYCG | 1 cut(s) | 145 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 102, 105, 1228, 1499, 1676 |
| BstNI | CCWGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| BstNSI | RCATGY | 6 cut(s) | 1828, 2016, 2741, 2866, 2870, 2890 |
| BstPI | GGTNACC | 1 cut(s) | 89 |
| BstSCI | CCNGG | 5 cut(s) | 341, 1432, 2057, 2190, 2364 |
| BstSFI | CTRYAG | 1 cut(s) | 806 |
| BstUI | CGCG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 9 cut(s) | 208, 345, 532, 698, 904, 1243, 1651, 1654, 2315 |
| BstV2I | GAAGAC | 1 cut(s) | 1369 |
| BstX2I | RGATCY | 4 cut(s) | 334, 1382, 2150, 2762 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 442, 2408 |
| BstYI | RGATCY | 4 cut(s) | 334, 1382, 2150, 2762 |
| BsuI | GTATCC | 2 cut(s) | 660, 1992 |
| BsuRI | GGCC | 7 cut(s) | 346, 380, 1437, 1586, 2190, 2604, 2794 |
| BtgI | CCRYGG | 2 cut(s) | 480, 1985 |
| BtrI | CACGTC | 1 cut(s) | 2288 |
| BtsCI | GGATG | 6 cut(s) | 642, 1273, 1407, 2259, 2345, 2737 |
| BtsIMutI | CAGTG | 5 cut(s) | 510, 845, 905, 1515, 2270 |
| BveI | ACCTGC | 2 cut(s) | 410, 2016 |
| Cac8I | GCNNGC | 1 cut(s) | 2812 |
| CaiI | CAGNNNCTG | 1 cut(s) | 358 |
| CfoI | GCGC | 1 cut(s) | 2491 |
| Cfr10I | RCCGGY | 1 cut(s) | 1420 |
| Cfr13I | GGNCC | 4 cut(s) | 981, 1207, 2550, 2792 |
| CseI | GACGC | 4 cut(s) | 36, 418, 1084, 2171 |
| Csp6I | GTAC | 4 cut(s) | 157, 562, 1029, 1962 |
| CviQI | GTAC | 4 cut(s) | 157, 562, 1029, 1962 |
| DdeI | CTNAG | 7 cut(s) | 229, 236, 722, 923, 1731, 2325, 2968 |
| DpnI | GATC | 7 cut(s) | 336, 705, 1384, 2152, 2215, 2456, 2764 |
| DpnII | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1131 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1131 |
| EaeI | YGGCCR | 3 cut(s) | 344, 378, 1435 |
| Eam1104I | CTCTTC | 3 cut(s) | 1608, 1752, 2832 |
| EarI | CTCTTC | 3 cut(s) | 1608, 1752, 2832 |
| EciI | GGCGGA | 1 cut(s) | 163 |
| Ecl136II | GAGCTC | 1 cut(s) | 235 |
| Eco130I | CCWWGG | 3 cut(s) | 480, 977, 1985 |
| Eco147I | AGGCCT | 1 cut(s) | 1586 |
| Eco24I | GRGCYC | 2 cut(s) | 237, 575 |
| Eco31I | GGTCTC | 1 cut(s) | 2688 |
| Eco32I | GATATC | 1 cut(s) | 2197 |
| Eco47I | GGWCC | 3 cut(s) | 981, 1207, 2550 |
| Eco53kI | GAGCTC | 1 cut(s) | 235 |
| Eco57I | CTGAAG | 2 cut(s) | 1632, 1938 |
| Eco91I | GGTNACC | 1 cut(s) | 89 |
| EcoICRI | GAGCTC | 1 cut(s) | 235 |
| EcoO109I | RGGNCCY | 2 cut(s) | 981, 2550 |
| EcoO65I | GGTNACC | 1 cut(s) | 89 |
| EcoRI | GAATTC | 2 cut(s) | 246, 451 |
| EcoRII | CCWGG | 5 cut(s) | 341, 1432, 2057, 2190, 2364 |
| EcoRV | GATATC | 1 cut(s) | 2197 |
| EcoT14I | CCWWGG | 3 cut(s) | 480, 977, 1985 |
| EcoT22I | ATGCAT | 3 cut(s) | 2009, 2868, 2892 |
| EcoT38I | GRGCYC | 2 cut(s) | 237, 575 |
| ErhI | CCWWGG | 3 cut(s) | 480, 977, 1985 |
| Esp3I | CGTCTC | 1 cut(s) | 1067 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 705, 737, 1308, 1340, 1524, 1556, 2934, 2966 |
| FaqI | GGGAC | 3 cut(s) | 34, 2084, 2536 |
| FauNDI | CATATG | 2 cut(s) | 2387, 2470 |
| FbaI | TGATCA | 1 cut(s) | 703 |
| FblI | GTMKAC | 2 cut(s) | 387, 1469 |
| FokI | GGATG | 6 cut(s) | 649, 1260, 1414, 2246, 2352, 2744 |
| FriOI | GRGCYC | 2 cut(s) | 237, 575 |
| FspBI | CTAG | 7 cut(s) | 1751, 1851, 1887, 1965, 2085, 2492, 2849 |
| GlaI | GCGC | 1 cut(s) | 2490 |
| GsaI | CCCAGC | 1 cut(s) | 2793 |
| GsuI | CTGGAG | 2 cut(s) | 2619, 2826 |
| HaeIII | GGCC | 7 cut(s) | 346, 380, 1437, 1586, 2190, 2604, 2794 |
| HapII | CCGG | 1 cut(s) | 1421 |
| HgaI | GACGC | 4 cut(s) | 36, 418, 1084, 2171 |
| HhaI | GCGC | 1 cut(s) | 2491 |
| Hin1I | GRCGYC | 1 cut(s) | 410 |
| Hin6I | GCGC | 1 cut(s) | 2489 |
| HinP1I | GCGC | 1 cut(s) | 2489 |
| HincII | GTYRAC | 5 cut(s) | 388, 1408, 1486, 2143, 2161 |
| HindII | GTYRAC | 5 cut(s) | 388, 1408, 1486, 2143, 2161 |
| HindIII | AAGCTT | 2 cut(s) | 694, 1733 |
| HpaII | CCGG | 1 cut(s) | 1421 |
| Hpy166II | GTNNAC | 8 cut(s) | 388, 564, 905, 1408, 1470, 1486, 2143, 2161 |
| Hpy188I | TCNGA | 7 cut(s) | 232, 239, 1382, 1624, 1795, 1801, 2703 |
| Hpy188III | TCNNGA | 6 cut(s) | 332, 797, 1277, 1751, 1811, 1865 |
| Hpy8I | GTNNAC | 8 cut(s) | 388, 564, 905, 1408, 1470, 1486, 2143, 2161 |
| Hpy99I | CGWCG | 6 cut(s) | 182, 207, 274, 371, 412, 580 |
| HpyAV | CCTTC | 7 cut(s) | 8, 160, 872, 1194, 1198, 1884, 2276 |
| HpyCH4III | ACNGT | 4 cut(s) | 121, 505, 1872, 2441 |
| HpyCH4IV | ACGT | 2 cut(s) | 155, 2287 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 102, 105, 1228, 1499, 1676 |
| HpyF3I | CTNAG | 7 cut(s) | 229, 236, 722, 923, 1731, 2325, 2968 |
| HpySE526I | ACGT | 2 cut(s) | 155, 2287 |
| Hsp92I | GRCGYC | 1 cut(s) | 410 |
| HspAI | GCGC | 1 cut(s) | 2489 |
| KflI | GGGWCCC | 1 cut(s) | 2550 |
| Ksp22I | TGATCA | 1 cut(s) | 703 |
| Kzo9I | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| LguI | GCTCTTC | 2 cut(s) | 1752, 2832 |
| LmnI | GCTCC | 5 cut(s) | 152, 204, 1005, 2807, 2918 |
| Lsp1109I | GCAGC | 9 cut(s) | 208, 345, 532, 698, 904, 1243, 1651, 1654, 2315 |
| LweI | GCATC | 4 cut(s) | 627, 1279, 2174, 2330 |
| MaeI | CTAG | 7 cut(s) | 1751, 1851, 1887, 1965, 2085, 2492, 2849 |
| MaeII | ACGT | 2 cut(s) | 155, 2287 |
| MalI | GATC | 7 cut(s) | 336, 705, 1384, 2152, 2215, 2456, 2764 |
| MbiI | CCGCTC | 1 cut(s) | 147 |
| MboI | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| MboII | GAAGA | 9 cut(s) | 1259, 1374, 1377, 1625, 1739, 2138, 2365, 2811, 2819 |
| MfeI | CAATTG | 3 cut(s) | 436, 1092, 2450 |
| MflI | RGATCY | 4 cut(s) | 334, 1382, 2150, 2762 |
| MhlI | GDGCHC | 4 cut(s) | 237, 297, 575, 1010 |
| MlsI | TGGCCA | 2 cut(s) | 346, 1437 |
| MluNI | TGGCCA | 2 cut(s) | 346, 1437 |
| MlyI | GAGTC | 1 cut(s) | 425 |
| MmeI | TCCRAC | 4 cut(s) | 148, 1379, 1745, 2317 |
| Mox20I | TGGCCA | 2 cut(s) | 346, 1437 |
| Mph1103I | ATGCAT | 3 cut(s) | 2009, 2868, 2892 |
| MroXI | GAANNNNTTC | 3 cut(s) | 785, 1458, 2254 |
| MscI | TGGCCA | 2 cut(s) | 346, 1437 |
| MslI | CAYNNNNRTG | 6 cut(s) | 260, 1013, 1179, 1278, 2511, 2903 |
| Msp20I | TGGCCA | 2 cut(s) | 346, 1437 |
| MspA1I | CMGCKG | 1 cut(s) | 836 |
| MspI | CCGG | 1 cut(s) | 1421 |
| MspR9I | CCNGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| MunI | CAATTG | 3 cut(s) | 436, 1092, 2450 |
| Mva1269I | GAATGC | 1 cut(s) | 2630 |
| MvaI | CCWGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| MvnI | CGCG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 102, 105, 1228, 1499, 1676 |
| NcoI | CCATGG | 2 cut(s) | 480, 1985 |
| NdeI | CATATG | 2 cut(s) | 2387, 2470 |
| NdeII | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| NlaIV | GGNNCC | 7 cut(s) | 336, 2056, 2152, 2257, 2551, 2552, 2809 |
| NmeAIII | GCCGAG | 1 cut(s) | 231 |
| NmuCI | GTSAC | 6 cut(s) | 89, 115, 499, 1181, 2315, 2421 |
| NsiI | ATGCAT | 3 cut(s) | 2009, 2868, 2892 |
| NspI | RCATGY | 6 cut(s) | 1828, 2016, 2741, 2866, 2870, 2890 |
| OliI | CACNNNNGTG | 1 cut(s) | 1013 |
| PaqCI | CACCTGC | 2 cut(s) | 410, 2016 |
| PceI | AGGCCT | 1 cut(s) | 1586 |
| PciI | ACATGT | 2 cut(s) | 1824, 2012 |
| PciSI | GCTCTTC | 2 cut(s) | 1752, 2832 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 584 |
| PctI | GAATGC | 1 cut(s) | 2630 |
| PdmI | GAANNNNTTC | 3 cut(s) | 785, 1458, 2254 |
| Pfl23II | CGTACG | 1 cut(s) | 156 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| PfoI | TCCNGGA | 1 cut(s) | 2364 |
| PleI | GAGTC | 1 cut(s) | 425 |
| PpsI | GAGTC | 1 cut(s) | 425 |
| Ppu21I | YACGTR | 1 cut(s) | 156 |
| PpuMI | RGGWCCY | 2 cut(s) | 981, 2550 |
| PscI | ACATGT | 2 cut(s) | 1824, 2012 |
| PsiI | TTATAA | 3 cut(s) | 1346, 1448, 2499 |
| Psp124BI | GAGCTC | 1 cut(s) | 237 |
| Psp5II | RGGWCCY | 2 cut(s) | 981, 2550 |
| Psp6I | CCWGG | 5 cut(s) | 341, 1432, 2057, 2190, 2364 |
| PspEI | GGTNACC | 1 cut(s) | 89 |
| PspFI | CCCAGC | 1 cut(s) | 2789 |
| PspGI | CCWGG | 5 cut(s) | 341, 1432, 2057, 2190, 2364 |
| PspLI | CGTACG | 1 cut(s) | 156 |
| PspN4I | GGNNCC | 7 cut(s) | 336, 2056, 2152, 2257, 2551, 2552, 2809 |
| PspPI | GGNCC | 4 cut(s) | 981, 1207, 2550, 2792 |
| PspPPI | RGGWCCY | 2 cut(s) | 981, 2550 |
| PstNI | CAGNNNCTG | 1 cut(s) | 358 |
| PsuI | RGATCY | 4 cut(s) | 334, 1382, 2150, 2762 |
| PvuII | CAGCTG | 1 cut(s) | 836 |
| RsaI | GTAC | 4 cut(s) | 158, 563, 1030, 1963 |
| RsaNI | GTAC | 4 cut(s) | 157, 562, 1029, 1962 |
| RseI | CAYNNNNRTG | 6 cut(s) | 260, 1013, 1179, 1278, 2511, 2903 |
| SacI | GAGCTC | 1 cut(s) | 237 |
| SalI | GTCGAC | 1 cut(s) | 386 |
| SapI | GCTCTTC | 2 cut(s) | 1752, 2832 |
| Sau3AI | GATC | 7 cut(s) | 334, 703, 1382, 2150, 2213, 2454, 2762 |
| Sau96I | GGNCC | 4 cut(s) | 981, 1207, 2550, 2792 |
| ScaI | AGTACT | 1 cut(s) | 1963 |
| SchI | GAGTC | 1 cut(s) | 425 |
| ScrFI | CCNGG | 5 cut(s) | 343, 1434, 2059, 2192, 2366 |
| SduI | GDGCHC | 4 cut(s) | 237, 297, 575, 1010 |
| SfaNI | GCATC | 4 cut(s) | 627, 1279, 2174, 2330 |
| SfcI | CTRYAG | 1 cut(s) | 806 |
| SinI | GGWCC | 3 cut(s) | 981, 1207, 2550 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 260, 1013, 1179, 1278, 2511, 2903 |
| SpeI | ACTAGT | 1 cut(s) | 1964 |
| SseBI | AGGCCT | 1 cut(s) | 1586 |
| SspI | AATATT | 2 cut(s) | 1377, 2713 |
| SspMI | CTAG | 7 cut(s) | 1751, 1851, 1887, 1965, 2085, 2492, 2849 |
| SstI | GAGCTC | 1 cut(s) | 237 |
| StuI | AGGCCT | 1 cut(s) | 1586 |
| StyD4I | CCNGG | 5 cut(s) | 341, 1432, 2057, 2190, 2364 |
| StyI | CCWWGG | 3 cut(s) | 480, 977, 1985 |
| TaaI | ACNGT | 4 cut(s) | 121, 505, 1872, 2441 |
| TaiI | ACGT | 2 cut(s) | 158, 2290 |
| TaqI | TCGA | 4 cut(s) | 180, 387, 575, 798 |
| TaqII | GACCGA | 1 cut(s) | 256 |
| TatI | WGTACW | 3 cut(s) | 561, 1028, 1961 |
| TauI | GCSGC | 6 cut(s) | 47, 99, 108, 268, 315, 2084 |
| TscAI | CASTG | 5 cut(s) | 510, 852, 912, 1515, 2270 |
| TseFI | GTSAC | 6 cut(s) | 89, 115, 499, 1181, 2315, 2421 |
| TseI | GCWGC | 9 cut(s) | 196, 358, 520, 686, 892, 1231, 1664, 1667, 2303 |
| Tsp45I | GTSAC | 6 cut(s) | 89, 115, 499, 1181, 2315, 2421 |
| TspGWI | ACGGA | 6 cut(s) | 103, 191, 280, 327, 355, 1025 |
| TspRI | CASTG | 5 cut(s) | 510, 852, 912, 1515, 2270 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 659, 1976, 2265, 2534, 2678 |
| VpaK11BI | GGWCC | 3 cut(s) | 981, 1207, 2550 |
| XapI | RAATTY | 4 cut(s) | 246, 451, 716, 910 |
| XbaI | TCTAGA | 1 cut(s) | 1750 |
| XceI | RCATGY | 6 cut(s) | 1828, 2016, 2741, 2866, 2870, 2890 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1538 |
| XmiI | GTMKAC | 2 cut(s) | 387, 1469 |
| XmnI | GAANNNNTTC | 3 cut(s) | 785, 1458, 2254 |
| XspI | CTAG | 7 cut(s) | 1751, 1851, 1887, 1965, 2085, 2492, 2849 |
| ZrmI | AGTACT | 1 cut(s) | 1963 |
| Zsp2I | ATGCAT | 3 cut(s) | 2009, 2868, 2892 |