ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008443 |
| rosa_multiflora | Rmu_sc0000433.1_g000030 |
| rosa_roxburghii | Rroxscaffold_3G00229450 |
| rosa_samantha | Rh1BG120000 Rh2BG060500 Rh2CG062500 Rh2DG239300 Rh2DG288100 Rh3AG176700 Rh3BG202600 Rh3BG314100 Rh3CG192900 Rh3CG200100 Rh3DG172600 Rh5AG508800 Rh5BG530000 Rh5BG530100 Rh5CG554400 Rh5CG554500 Rh6AG027300 Rh6BG023200 Rh6BG023400 Rh6BG169600 Rh7DG276100 |
| rosa_wichuraiana | Rw5G046860 Rw6G002310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 74 |
| AfaI | GTAC | 1 cut(s) | 130 |
| AgsI | TTSAA | 3 cut(s) | 8, 60, 115 |
| AluBI | AGCT | 2 cut(s) | 197, 284 |
| AluI | AGCT | 2 cut(s) | 197, 284 |
| Alw21I | GWGCWC | 1 cut(s) | 286 |
| AlwI | GGATC | 1 cut(s) | 74 |
| AoxI | GGCC | 2 cut(s) | 53, 87 |
| AspS9I | GGNCC | 1 cut(s) | 87 |
| AsuC2I | CCSGG | 1 cut(s) | 84 |
| BanII | GRGCYC | 1 cut(s) | 286 |
| Bbv12I | GWGCWC | 1 cut(s) | 286 |
| BccI | CCATC | 1 cut(s) | 250 |
| BceAI | ACGGC | 1 cut(s) | 160 |
| BclI | TGATCA | 1 cut(s) | 94 |
| BcnI | CCSGG | 1 cut(s) | 84 |
| Bme1390I | CCNGG | 1 cut(s) | 84 |
| BmgT120I | GGNCC | 1 cut(s) | 87 |
| BmiI | GGNNCC | 1 cut(s) | 88 |
| BmrFI | CCNGG | 1 cut(s) | 84 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 235, 267 |
| BpuMI | CCSGG | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 1 cut(s) | 83 |
| BseDI | CCNNGG | 1 cut(s) | 83 |
| BshFI | GGCC | 2 cut(s) | 55, 89 |
| BsiHKAI | GWGCWC | 1 cut(s) | 286 |
| BsiSI | CCGG | 1 cut(s) | 83 |
| BsnI | GGCC | 2 cut(s) | 55, 89 |
| Bsp1286I | GDGCHC | 1 cut(s) | 286 |
| Bsp143I | GATC | 2 cut(s) | 79, 94 |
| BspANI | GGCC | 2 cut(s) | 55, 89 |
| BspLI | GGNNCC | 1 cut(s) | 88 |
| BspPI | GGATC | 1 cut(s) | 74 |
| BspQI | GCTCTTC | 1 cut(s) | 116 |
| BssECI | CCNNGG | 1 cut(s) | 83 |
| BssMI | GATC | 2 cut(s) | 79, 94 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstKTI | GATC | 2 cut(s) | 82, 97 |
| BstMBI | GATC | 2 cut(s) | 79, 94 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 61 |
| BstSCI | CCNGG | 1 cut(s) | 82 |
| BsuRI | GGCC | 2 cut(s) | 55, 89 |
| Cfr13I | GGNCC | 1 cut(s) | 87 |
| Csp6I | GTAC | 1 cut(s) | 129 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 203, 238 |
| CviAII | CATG | 2 cut(s) | 74, 143 |
| CviJI | RGCY | 8 cut(s) | 13, 55, 89, 104, 175, 197, 249, 284 |
| CviKI_1 | RGCY | 8 cut(s) | 13, 55, 89, 104, 175, 197, 249, 284 |
| CviQI | GTAC | 1 cut(s) | 129 |
| DpnI | GATC | 2 cut(s) | 81, 96 |
| DpnII | GATC | 2 cut(s) | 79, 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| Ecl136II | GAGCTC | 1 cut(s) | 284 |
| Eco24I | GRGCYC | 1 cut(s) | 286 |
| Eco53kI | GAGCTC | 1 cut(s) | 284 |
| EcoICRI | GAGCTC | 1 cut(s) | 284 |
| EcoO109I | RGGNCCY | 1 cut(s) | 87 |
| EcoT38I | GRGCYC | 1 cut(s) | 286 |
| FaeI | CATG | 2 cut(s) | 77, 146 |
| FaiI | YATR | 4 cut(s) | 45, 75, 107, 144 |
| FatI | CATG | 2 cut(s) | 73, 142 |
| FbaI | TGATCA | 1 cut(s) | 94 |
| FriOI | GRGCYC | 1 cut(s) | 286 |
| HaeIII | GGCC | 2 cut(s) | 55, 89 |
| HapII | CCGG | 1 cut(s) | 83 |
| Hin1II | CATG | 2 cut(s) | 77, 146 |
| HindIII | AAGCTT | 1 cut(s) | 195 |
| HpaII | CCGG | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 3 cut(s) | 94, 255, 292 |
| HpyAV | CCTTC | 1 cut(s) | 66 |
| HpyCH4IV | ACGT | 1 cut(s) | 131 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 64 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 61 |
| HpySE526I | ACGT | 1 cut(s) | 131 |
| Hsp92II | CATG | 2 cut(s) | 77, 146 |
| Ksp22I | TGATCA | 1 cut(s) | 94 |
| Kzo9I | GATC | 2 cut(s) | 79, 94 |
| LguI | GCTCTTC | 1 cut(s) | 116 |
| LpnPI | CCDG | 2 cut(s) | 86, 96 |
| MaeII | ACGT | 1 cut(s) | 131 |
| MaeIII | GTNAC | 1 cut(s) | 132 |
| MalI | GATC | 2 cut(s) | 81, 96 |
| MboI | GATC | 2 cut(s) | 79, 94 |
| MboII | GAAGA | 1 cut(s) | 103 |
| MhlI | GDGCHC | 1 cut(s) | 286 |
| MluCI | AATT | 2 cut(s) | 167, 263 |
| MmeI | TCCRAC | 1 cut(s) | 270 |
| MnlI | CCTC | 6 cut(s) | 14, 100, 140, 184, 196, 220 |
| MseI | TTAA | 2 cut(s) | 30, 186 |
| MspI | CCGG | 1 cut(s) | 83 |
| MspR9I | CCNGG | 1 cut(s) | 84 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 61 |
| NciI | CCSGG | 1 cut(s) | 84 |
| NdeII | GATC | 2 cut(s) | 79, 94 |
| NlaIII | CATG | 2 cut(s) | 77, 146 |
| NlaIV | GGNNCC | 1 cut(s) | 88 |
| PciSI | GCTCTTC | 1 cut(s) | 116 |
| Psp124BI | GAGCTC | 1 cut(s) | 286 |
| PspN4I | GGNNCC | 1 cut(s) | 88 |
| PspPI | GGNCC | 1 cut(s) | 87 |
| RsaI | GTAC | 1 cut(s) | 130 |
| RsaNI | GTAC | 1 cut(s) | 129 |
| SacI | GAGCTC | 1 cut(s) | 286 |
| SapI | GCTCTTC | 1 cut(s) | 116 |
| SaqAI | TTAA | 2 cut(s) | 30, 186 |
| Sau3AI | GATC | 2 cut(s) | 79, 94 |
| Sau96I | GGNCC | 1 cut(s) | 87 |
| ScrFI | CCNGG | 1 cut(s) | 84 |
| SduI | GDGCHC | 1 cut(s) | 286 |
| SetI | ASST | 5 cut(s) | 134, 199, 231, 235, 286 |
| Sse9I | AATT | 2 cut(s) | 167, 263 |
| SstI | GAGCTC | 1 cut(s) | 286 |
| StyD4I | CCNGG | 1 cut(s) | 82 |
| TaiI | ACGT | 1 cut(s) | 134 |
| TaqI | TCGA | 2 cut(s) | 78, 280 |
| TasI | AATT | 2 cut(s) | 167, 263 |
| Tru1I | TTAA | 2 cut(s) | 30, 186 |
| Tru9I | TTAA | 2 cut(s) | 30, 186 |
| TspDTI | ATGAA | 1 cut(s) | 62 |