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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008443 |
| rosa_multiflora | Rmu_sc0000433.1_g000030 |
| rosa_roxburghii | Rroxscaffold_3G00229450 |
| rosa_samantha | Rh1BG120000 Rh2BG060500 Rh2CG062500 Rh2DG239300 Rh2DG288100 Rh3AG176700 Rh3BG202600 Rh3BG314100 Rh3CG192900 Rh3CG200100 Rh3DG172600 Rh5AG508800 Rh5BG530000 Rh5BG530100 Rh5CG554400 Rh5CG554500 Rh6AG027300 Rh6BG023200 Rh6BG023400 Rh6BG169600 Rh7DG276100 |
| rosa_wichuraiana | Rw5G046860 Rw6G002310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 141 |
| AciI | CCGC | 2 cut(s) | 76, 291 |
| AfaI | GTAC | 1 cut(s) | 566 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 341 |
| AgsI | TTSAA | 4 cut(s) | 246, 403, 461, 503 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 94 |
| AluBI | AGCT | 3 cut(s) | 392, 506, 533 |
| AluI | AGCT | 3 cut(s) | 392, 506, 533 |
| Alw26I | GTCTC | 1 cut(s) | 8 |
| AoxI | GGCC | 2 cut(s) | 332, 535 |
| ApeKI | GCWGC | 1 cut(s) | 61 |
| AspA2I | CCTAGG | 1 cut(s) | 431 |
| AspLEI | GCGC | 1 cut(s) | 84 |
| AspS9I | GGNCC | 1 cut(s) | 333 |
| AsuHPI | GGTGA | 2 cut(s) | 125, 484 |
| AvrII | CCTAGG | 1 cut(s) | 431 |
| BbvI | GCAGC | 1 cut(s) | 73 |
| BccI | CCATC | 3 cut(s) | 26, 34, 43 |
| BceAI | ACGGC | 1 cut(s) | 461 |
| BcoDI | GTCTC | 1 cut(s) | 8 |
| BfaI | CTAG | 4 cut(s) | 18, 324, 389, 432 |
| BisI | GCNGC | 1 cut(s) | 62 |
| BlnI | CCTAGG | 1 cut(s) | 431 |
| BlsI | GCNGC | 1 cut(s) | 63 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 94 |
| BmgT120I | GGNCC | 1 cut(s) | 333 |
| BmsI | GCATC | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 431 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 341 |
| Bse3DI | GCAATG | 1 cut(s) | 548 |
| BseDI | CCNNGG | 1 cut(s) | 431 |
| BseGI | GGATG | 1 cut(s) | 187 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 341 |
| BseMI | GCAATG | 1 cut(s) | 548 |
| BseMII | CTCAG | 1 cut(s) | 169 |
| BseRI | GAGGAG | 3 cut(s) | 131, 299, 353 |
| BseXI | GCAGC | 1 cut(s) | 73 |
| BsgI | GTGCAG | 1 cut(s) | 399 |
| BshFI | GGCC | 2 cut(s) | 334, 537 |
| BsiSI | CCGG | 2 cut(s) | 65, 191 |
| BslFI | GGGAC | 1 cut(s) | 49 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 341 |
| BsmAI | GTCTC | 1 cut(s) | 8 |
| BsmFI | GGGAC | 1 cut(s) | 49 |
| BsnI | GGCC | 2 cut(s) | 334, 537 |
| Bsp143I | GATC | 1 cut(s) | 382 |
| BspACI | CCGC | 2 cut(s) | 76, 291 |
| BspANI | GGCC | 2 cut(s) | 334, 537 |
| BspCNI | CTCAG | 1 cut(s) | 168 |
| BsrDI | GCAATG | 1 cut(s) | 548 |
| BssECI | CCNNGG | 1 cut(s) | 431 |
| BssMI | GATC | 1 cut(s) | 382 |
| BssT1I | CCWWGG | 1 cut(s) | 431 |
| Bst4CI | ACNGT | 2 cut(s) | 465, 569 |
| BstC8I | GCNNGC | 2 cut(s) | 535, 539 |
| BstDEI | CTNAG | 1 cut(s) | 155 |
| BstF5I | GGATG | 1 cut(s) | 187 |
| BstHHI | GCGC | 1 cut(s) | 84 |
| BstKTI | GATC | 1 cut(s) | 385 |
| BstMAI | GTCTC | 1 cut(s) | 8 |
| BstMBI | GATC | 1 cut(s) | 382 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 543 |
| BstV1I | GCAGC | 1 cut(s) | 73 |
| BsuRI | GGCC | 2 cut(s) | 334, 537 |
| BtsCI | GGATG | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 2 cut(s) | 535, 539 |
| CfoI | GCGC | 1 cut(s) | 84 |
| Cfr13I | GGNCC | 1 cut(s) | 333 |
| Csp6I | GTAC | 1 cut(s) | 565 |
| CviAII | CATG | 3 cut(s) | 85, 220, 490 |
| CviJI | RGCY | 9 cut(s) | 64, 301, 334, 392, 430, 506, 533, 537, 576 |
| CviKI_1 | RGCY | 9 cut(s) | 64, 301, 334, 392, 430, 506, 533, 537, 576 |
| CviQI | GTAC | 1 cut(s) | 565 |
| DdeI | CTNAG | 1 cut(s) | 155 |
| DpnI | GATC | 1 cut(s) | 384 |
| DpnII | GATC | 1 cut(s) | 382 |
| DriI | GACNNNNNGTC | 1 cut(s) | 94 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 94 |
| Eco130I | CCWWGG | 1 cut(s) | 431 |
| EcoT14I | CCWWGG | 1 cut(s) | 431 |
| ErhI | CCWWGG | 1 cut(s) | 431 |
| FaeI | CATG | 3 cut(s) | 88, 223, 493 |
| FaiI | YATR | 8 cut(s) | 86, 141, 170, 200, 221, 320, 491, 511 |
| FaqI | GGGAC | 1 cut(s) | 49 |
| FatI | CATG | 3 cut(s) | 84, 219, 489 |
| Fnu4HI | GCNGC | 1 cut(s) | 62 |
| FokI | GGATG | 1 cut(s) | 194 |
| Fsp4HI | GCNGC | 1 cut(s) | 62 |
| FspBI | CTAG | 4 cut(s) | 18, 324, 389, 432 |
| GlaI | GCGC | 1 cut(s) | 83 |
| GluI | GCNGC | 1 cut(s) | 62 |
| HaeIII | GGCC | 2 cut(s) | 334, 537 |
| HapII | CCGG | 2 cut(s) | 65, 191 |
| HhaI | GCGC | 1 cut(s) | 84 |
| Hin1II | CATG | 3 cut(s) | 88, 223, 493 |
| Hin6I | GCGC | 1 cut(s) | 82 |
| HinP1I | GCGC | 1 cut(s) | 82 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HinfI | GANTC | 2 cut(s) | 7, 494 |
| HpaII | CCGG | 2 cut(s) | 65, 191 |
| HphI | GGTGA | 2 cut(s) | 125, 484 |
| Hpy166II | GTNNAC | 1 cut(s) | 352 |
| Hpy188III | TCNNGA | 2 cut(s) | 11, 324 |
| Hpy8I | GTNNAC | 1 cut(s) | 352 |
| HpyAV | CCTTC | 2 cut(s) | 230, 409 |
| HpyCH4III | ACNGT | 2 cut(s) | 465, 569 |
| HpyCH4V | TGCA | 5 cut(s) | 61, 380, 489, 541, 546 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 543 |
| HpyF3I | CTNAG | 1 cut(s) | 155 |
| Hsp92II | CATG | 3 cut(s) | 88, 223, 493 |
| HspAI | GCGC | 1 cut(s) | 82 |
| Kzo9I | GATC | 1 cut(s) | 382 |
| LpnPI | CCDG | 9 cut(s) | 78, 204, 213, 270, 467, 504, 519, 551, 558 |
| Lsp1109I | GCAGC | 1 cut(s) | 73 |
| LweI | GCATC | 1 cut(s) | 48 |
| MaeI | CTAG | 4 cut(s) | 18, 324, 389, 432 |
| MaeIII | GTNAC | 1 cut(s) | 420 |
| MalI | GATC | 1 cut(s) | 384 |
| MboI | GATC | 1 cut(s) | 382 |
| MboII | GAAGA | 3 cut(s) | 448, 451, 491 |
| MluCI | AATT | 2 cut(s) | 241, 313 |
| MlyI | GAGTC | 1 cut(s) | 503 |
| MmeI | TCCRAC | 1 cut(s) | 261 |
| MnlI | CCTC | 8 cut(s) | 72, 103, 109, 217, 277, 320, 324, 374 |
| MseI | TTAA | 2 cut(s) | 45, 174 |
| MspI | CCGG | 2 cut(s) | 65, 191 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 543 |
| NdeII | GATC | 1 cut(s) | 382 |
| NlaIII | CATG | 3 cut(s) | 88, 223, 493 |
| PfeI | GAWTC | 1 cut(s) | 7 |
| PkrI | GCNGC | 1 cut(s) | 63 |
| PleI | GAGTC | 1 cut(s) | 502 |
| PpsI | GAGTC | 1 cut(s) | 502 |
| PsiI | TTATAA | 1 cut(s) | 141 |
| PspPI | GGNCC | 1 cut(s) | 333 |
| RsaI | GTAC | 1 cut(s) | 566 |
| RsaNI | GTAC | 1 cut(s) | 565 |
| SaqAI | TTAA | 2 cut(s) | 45, 174 |
| SatI | GCNGC | 1 cut(s) | 62 |
| Sau3AI | GATC | 1 cut(s) | 382 |
| Sau96I | GGNCC | 1 cut(s) | 333 |
| SchI | GAGTC | 1 cut(s) | 503 |
| SetI | ASST | 7 cut(s) | 241, 310, 343, 351, 394, 508, 535 |
| SfaNI | GCATC | 1 cut(s) | 48 |
| Sse9I | AATT | 2 cut(s) | 241, 313 |
| SsiI | CCGC | 2 cut(s) | 76, 291 |
| SspMI | CTAG | 4 cut(s) | 18, 324, 389, 432 |
| StyI | CCWWGG | 1 cut(s) | 431 |
| TaaI | ACNGT | 2 cut(s) | 465, 569 |
| TasI | AATT | 2 cut(s) | 241, 313 |
| TfiI | GAWTC | 1 cut(s) | 7 |
| Tru1I | TTAA | 2 cut(s) | 45, 174 |
| Tru9I | TTAA | 2 cut(s) | 45, 174 |
| TseI | GCWGC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 1 cut(s) | 208 |
| XbaI | TCTAGA | 1 cut(s) | 323 |
| XmaJI | CCTAGG | 1 cut(s) | 431 |
| XspI | CTAG | 4 cut(s) | 18, 324, 389, 432 |