No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008443 |
| rosa_multiflora | Rmu_sc0000433.1_g000030 |
| rosa_roxburghii | Rroxscaffold_3G00229450 |
| rosa_samantha | Rh1BG120000 Rh2BG060500 Rh2CG062500 Rh2DG239300 Rh2DG288100 Rh3AG176700 Rh3BG202600 Rh3BG314100 Rh3CG192900 Rh3CG200100 Rh3DG172600 Rh5AG508800 Rh5BG530000 Rh5BG530100 Rh5CG554400 Rh5CG554500 Rh6AG027300 Rh6BG023200 Rh6BG023400 Rh6BG169600 Rh7DG276100 |
| rosa_wichuraiana | Rw5G046860 Rw6G002310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 175 |
| AcsI | RAATTY | 1 cut(s) | 121 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AgsI | TTSAA | 3 cut(s) | 73, 140, 164 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 184 |
| AluBI | AGCT | 1 cut(s) | 143 |
| AluI | AGCT | 1 cut(s) | 143 |
| Alw26I | GTCTC | 1 cut(s) | 83 |
| Ama87I | CYCGRG | 1 cut(s) | 54 |
| ApoI | RAATTY | 1 cut(s) | 121 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 25 |
| AsuC2I | CCSGG | 1 cut(s) | 108 |
| AvaI | CYCGRG | 1 cut(s) | 54 |
| BauI | CACGAG | 1 cut(s) | 63 |
| BccI | CCATC | 2 cut(s) | 11, 149 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5, 39 |
| BcnI | CCSGG | 1 cut(s) | 108 |
| BcoDI | GTCTC | 1 cut(s) | 83 |
| Bme1390I | CCNGG | 1 cut(s) | 108 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 184 |
| BmeT110I | CYCGRG | 1 cut(s) | 54 |
| BmrFI | CCNGG | 1 cut(s) | 108 |
| BpuMI | CCSGG | 1 cut(s) | 108 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BsiHKCI | CYCGRG | 1 cut(s) | 54 |
| BsiSI | CCGG | 1 cut(s) | 107 |
| BslFI | GGGAC | 1 cut(s) | 26 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BsmAI | GTCTC | 1 cut(s) | 83 |
| BsmFI | GGGAC | 1 cut(s) | 26 |
| BsoBI | CYCGRG | 1 cut(s) | 54 |
| BspACI | CCGC | 1 cut(s) | 175 |
| BspHI | TCATGA | 1 cut(s) | 188 |
| BssSI | CACGAG | 1 cut(s) | 63 |
| Bst2BI | CACGAG | 1 cut(s) | 63 |
| BstMAI | GTCTC | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 181 |
| BstSCI | CCNGG | 1 cut(s) | 106 |
| CciI | TCATGA | 1 cut(s) | 188 |
| CviAII | CATG | 1 cut(s) | 189 |
| CviJI | RGCY | 1 cut(s) | 143 |
| CviKI_1 | RGCY | 1 cut(s) | 143 |
| DraI | TTTAAA | 1 cut(s) | 126 |
| DriI | GACNNNNNGTC | 1 cut(s) | 184 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 184 |
| Eco88I | CYCGRG | 1 cut(s) | 54 |
| FaeI | CATG | 1 cut(s) | 192 |
| FaiI | YATR | 2 cut(s) | 45, 190 |
| FaqI | GGGAC | 1 cut(s) | 26 |
| FatI | CATG | 1 cut(s) | 188 |
| FauI | CCCGC | 1 cut(s) | 168 |
| HapII | CCGG | 1 cut(s) | 107 |
| Hin1II | CATG | 1 cut(s) | 192 |
| HindIII | AAGCTT | 1 cut(s) | 141 |
| HinfI | GANTC | 1 cut(s) | 40 |
| HpaII | CCGG | 1 cut(s) | 107 |
| Hpy188III | TCNNGA | 4 cut(s) | 54, 63, 161, 189 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 181 |
| Hsp92II | CATG | 1 cut(s) | 192 |
| LpnPI | CCDG | 1 cut(s) | 120 |
| MfeI | CAATTG | 1 cut(s) | 93 |
| MluCI | AATT | 3 cut(s) | 76, 93, 121 |
| MnlI | CCTC | 1 cut(s) | 40 |
| MroXI | GAANNNNTTC | 1 cut(s) | 25 |
| MseI | TTAA | 1 cut(s) | 125 |
| MspI | CCGG | 1 cut(s) | 107 |
| MspR9I | CCNGG | 1 cut(s) | 108 |
| MunI | CAATTG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 181 |
| NciI | CCSGG | 1 cut(s) | 108 |
| NlaIII | CATG | 1 cut(s) | 192 |
| PaeR7I | CTCGAG | 1 cut(s) | 54 |
| PagI | TCATGA | 1 cut(s) | 188 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 61 |
| PdmI | GAANNNNTTC | 1 cut(s) | 25 |
| PfeI | GAWTC | 1 cut(s) | 40 |
| SaqAI | TTAA | 1 cut(s) | 125 |
| ScrFI | CCNGG | 1 cut(s) | 108 |
| SetI | ASST | 2 cut(s) | 145, 151 |
| Sfr274I | CTCGAG | 1 cut(s) | 54 |
| SlaI | CTCGAG | 1 cut(s) | 54 |
| SmiI | ATTTAAAT | 1 cut(s) | 126 |
| SmlI | CTYRAG | 1 cut(s) | 54 |
| SmoI | CTYRAG | 1 cut(s) | 54 |
| Sse9I | AATT | 3 cut(s) | 76, 93, 121 |
| SsiI | CCGC | 1 cut(s) | 175 |
| StyD4I | CCNGG | 1 cut(s) | 106 |
| SwaI | ATTTAAAT | 1 cut(s) | 126 |
| TaqI | TCGA | 1 cut(s) | 55 |
| TasI | AATT | 3 cut(s) | 76, 93, 121 |
| TfiI | GAWTC | 1 cut(s) | 40 |
| Tru1I | TTAA | 1 cut(s) | 125 |
| Tru9I | TTAA | 1 cut(s) | 125 |
| TspDTI | ATGAA | 2 cut(s) | 32, 147 |
| XapI | RAATTY | 1 cut(s) | 121 |
| XhoI | CTCGAG | 1 cut(s) | 54 |
| XmnI | GAANNNNTTC | 1 cut(s) | 25 |