ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008443 |
| rosa_multiflora | Rmu_sc0000433.1_g000030 |
| rosa_roxburghii | Rroxscaffold_3G00229450 |
| rosa_samantha | Rh1BG120000 Rh2BG060500 Rh2CG062500 Rh2DG239300 Rh2DG288100 Rh3AG176700 Rh3BG202600 Rh3BG314100 Rh3CG192900 Rh3CG200100 Rh3DG172600 Rh5AG508800 Rh5BG530000 Rh5BG530100 Rh5CG554400 Rh5CG554500 Rh6AG027300 Rh6BG023200 Rh6BG023400 Rh6BG169600 Rh7DG276100 |
| rosa_wichuraiana | Rw5G046860 Rw6G002310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 180 |
| AcvI | CACGTG | 1 cut(s) | 90 |
| AfaI | GTAC | 1 cut(s) | 382 |
| AgsI | TTSAA | 5 cut(s) | 31, 220, 278, 320, 515 |
| AluBI | AGCT | 5 cut(s) | 14, 146, 209, 323, 350 |
| AluI | AGCT | 5 cut(s) | 14, 146, 209, 323, 350 |
| AoxI | GGCC | 2 cut(s) | 158, 352 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 489 |
| AsuHPI | GGTGA | 1 cut(s) | 301 |
| BbrPI | CACGTG | 1 cut(s) | 90 |
| BccI | CCATC | 1 cut(s) | 179 |
| BclI | TGATCA | 1 cut(s) | 472 |
| BfaI | CTAG | 1 cut(s) | 206 |
| BfmI | CTRYAG | 1 cut(s) | 39 |
| BmiI | GGNNCC | 1 cut(s) | 79 |
| BmsI | GCATC | 1 cut(s) | 486 |
| BpmI | CTGGAG | 1 cut(s) | 476 |
| BsaAI | YACGTR | 1 cut(s) | 90 |
| BsaJI | CCNNGG | 1 cut(s) | 248 |
| Bse1I | ACTGG | 2 cut(s) | 401, 459 |
| Bse3DI | GCAATG | 1 cut(s) | 365 |
| BseDI | CCNNGG | 1 cut(s) | 248 |
| BseGI | GGATG | 1 cut(s) | 475 |
| BseMI | GCAATG | 1 cut(s) | 365 |
| BseNI | ACTGG | 2 cut(s) | 401, 459 |
| BshFI | GGCC | 2 cut(s) | 160, 354 |
| BsnI | GGCC | 2 cut(s) | 160, 354 |
| Bsp143I | GATC | 3 cut(s) | 5, 199, 472 |
| BspANI | GGCC | 2 cut(s) | 160, 354 |
| BspLI | GGNNCC | 1 cut(s) | 79 |
| BsrDI | GCAATG | 1 cut(s) | 365 |
| BsrI | ACTGG | 2 cut(s) | 401, 459 |
| BssECI | CCNNGG | 1 cut(s) | 248 |
| BssMI | GATC | 3 cut(s) | 5, 199, 472 |
| BssT1I | CCWWGG | 1 cut(s) | 248 |
| Bst4CI | ACNGT | 2 cut(s) | 282, 385 |
| BstBAI | YACGTR | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 2 cut(s) | 352, 356 |
| BstF5I | GGATG | 1 cut(s) | 475 |
| BstKTI | GATC | 3 cut(s) | 8, 202, 475 |
| BstMBI | GATC | 3 cut(s) | 5, 199, 472 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 166, 360, 505 |
| BstSFI | CTRYAG | 1 cut(s) | 39 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 90, 185 |
| BsuRI | GGCC | 2 cut(s) | 160, 354 |
| BtsCI | GGATG | 1 cut(s) | 475 |
| Cac8I | GCNNGC | 2 cut(s) | 352, 356 |
| Csp6I | GTAC | 1 cut(s) | 381 |
| CviAII | CATG | 3 cut(s) | 179, 307, 482 |
| CviQI | GTAC | 1 cut(s) | 381 |
| DpnI | GATC | 3 cut(s) | 7, 201, 474 |
| DpnII | GATC | 3 cut(s) | 5, 199, 472 |
| Eco130I | CCWWGG | 1 cut(s) | 248 |
| Eco57I | CTGAAG | 1 cut(s) | 180 |
| Eco72I | CACGTG | 1 cut(s) | 90 |
| EcoT14I | CCWWGG | 1 cut(s) | 248 |
| ErhI | CCWWGG | 1 cut(s) | 248 |
| FaeI | CATG | 3 cut(s) | 182, 310, 485 |
| FaiI | YATR | 8 cut(s) | 105, 157, 180, 308, 328, 462, 483, 504 |
| FatI | CATG | 3 cut(s) | 178, 306, 481 |
| FbaI | TGATCA | 1 cut(s) | 472 |
| FokI | GGATG | 1 cut(s) | 462 |
| FspBI | CTAG | 1 cut(s) | 206 |
| GsuI | CTGGAG | 1 cut(s) | 476 |
| HaeIII | GGCC | 2 cut(s) | 160, 354 |
| Hin1II | CATG | 3 cut(s) | 182, 310, 485 |
| HindIII | AAGCTT | 1 cut(s) | 144 |
| HinfI | GANTC | 1 cut(s) | 485 |
| HphI | GGTGA | 1 cut(s) | 301 |
| Hpy188I | TCNGA | 3 cut(s) | 10, 199, 495 |
| HpyAV | CCTTC | 2 cut(s) | 226, 442 |
| HpyCH4III | ACNGT | 2 cut(s) | 282, 385 |
| HpyCH4IV | ACGT | 1 cut(s) | 89 |
| HpyCH4V | TGCA | 4 cut(s) | 306, 358, 363, 499 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 166, 360, 505 |
| HpySE526I | ACGT | 1 cut(s) | 89 |
| Hsp92II | CATG | 3 cut(s) | 182, 310, 485 |
| Ksp22I | TGATCA | 1 cut(s) | 472 |
| Kzo9I | GATC | 3 cut(s) | 5, 199, 472 |
| LmnI | GCTCC | 1 cut(s) | 457 |
| LpnPI | CCDG | 7 cut(s) | 60, 284, 336, 368, 374, 382, 440 |
| LweI | GCATC | 1 cut(s) | 486 |
| MaeI | CTAG | 1 cut(s) | 206 |
| MaeII | ACGT | 1 cut(s) | 89 |
| MaeIII | GTNAC | 1 cut(s) | 237 |
| MalI | GATC | 3 cut(s) | 7, 201, 474 |
| MboI | GATC | 3 cut(s) | 5, 199, 472 |
| MboII | GAAGA | 4 cut(s) | 58, 265, 268, 308 |
| MluCI | AATT | 2 cut(s) | 163, 440 |
| MnlI | CCTC | 5 cut(s) | 15, 28, 37, 108, 119 |
| MroXI | GAANNNNTTC | 1 cut(s) | 489 |
| MslI | CAYNNNNRTG | 3 cut(s) | 88, 183, 480 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 166, 360, 505 |
| NdeII | GATC | 3 cut(s) | 5, 199, 472 |
| NlaIII | CATG | 3 cut(s) | 182, 310, 485 |
| NlaIV | GGNNCC | 1 cut(s) | 79 |
| PdmI | GAANNNNTTC | 1 cut(s) | 489 |
| PfeI | GAWTC | 1 cut(s) | 485 |
| PmaCI | CACGTG | 1 cut(s) | 90 |
| PmlI | CACGTG | 1 cut(s) | 90 |
| Ppu21I | YACGTR | 1 cut(s) | 90 |
| PspCI | CACGTG | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 1 cut(s) | 79 |
| RsaI | GTAC | 1 cut(s) | 382 |
| RsaNI | GTAC | 1 cut(s) | 381 |
| RseI | CAYNNNNRTG | 3 cut(s) | 88, 183, 480 |
| Sau3AI | GATC | 3 cut(s) | 5, 199, 472 |
| SetI | ASST | 7 cut(s) | 16, 92, 130, 148, 211, 325, 352 |
| SfaNI | GCATC | 1 cut(s) | 486 |
| SfcI | CTRYAG | 1 cut(s) | 39 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 88, 183, 480 |
| Sse9I | AATT | 2 cut(s) | 163, 440 |
| SspMI | CTAG | 1 cut(s) | 206 |
| StyI | CCWWGG | 1 cut(s) | 248 |
| TaaI | ACNGT | 2 cut(s) | 282, 385 |
| TaiI | ACGT | 1 cut(s) | 92 |
| TaqI | TCGA | 1 cut(s) | 95 |
| TasI | AATT | 2 cut(s) | 163, 440 |
| TfiI | GAWTC | 1 cut(s) | 485 |
| TspDTI | ATGAA | 1 cut(s) | 498 |
| TspGWI | ACGGA | 1 cut(s) | 460 |
| XmnI | GAANNNNTTC | 1 cut(s) | 489 |
| XspI | CTAG | 1 cut(s) | 206 |