A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g18410 FvH4_1g18410 |
| rosa_chinensis | RchiOBHm_Chr2g0109111 |
| rosa_laevigata | RLG00000008160 RLG00000008316 RLG00000008418 RLG00000009006 RLG00000012163 RLG00000021316 RLG00000027390 RLG00000032253 RLG00000033851 |
| rosa_multiflora | Rmu_sc0000186.1_g000009 Rmu_sc0000363.1_g000034 Rmu_sc0000820.1_g000019 Rmu_sc0006431.1_g000002 Rmu_sc0010364.1_g000003 Rmu_sc0023232.1_g000001 Rmu_ssc0000114.1_g000057 |
| rosa_roxburghii | Rroxscaffold_2G00092820 Rroxscaffold_7G00189280 |
| rosa_samantha | Rh2AG209000 Rh2AG289900 Rh2AG384200 Rh2BG219400 Rh4DG149700 Rh6AG171600 Rh7DG394000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 350 |
| AccB1I | GGYRCC | 1 cut(s) | 350 |
| AciI | CCGC | 1 cut(s) | 22 |
| AcsI | RAATTY | 1 cut(s) | 61 |
| AcuI | CTGAAG | 1 cut(s) | 266 |
| AfaI | GTAC | 1 cut(s) | 352 |
| AgsI | TTSAA | 1 cut(s) | 44 |
| AluBI | AGCT | 2 cut(s) | 198, 210 |
| AluI | AGCT | 2 cut(s) | 198, 210 |
| Alw26I | GTCTC | 3 cut(s) | 10, 162, 234 |
| ApeKI | GCWGC | 2 cut(s) | 125, 299 |
| ApoI | RAATTY | 1 cut(s) | 61 |
| Asp718I | GGTACC | 1 cut(s) | 350 |
| AxyI | CCTNAGG | 1 cut(s) | 36 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 342, 375 |
| BanI | GGYRCC | 1 cut(s) | 350 |
| BauI | CACGAG | 1 cut(s) | 178 |
| BbvI | GCAGC | 2 cut(s) | 112, 286 |
| BccI | CCATC | 1 cut(s) | 301 |
| BcoDI | GTCTC | 3 cut(s) | 10, 162, 234 |
| BfmI | CTRYAG | 1 cut(s) | 300 |
| BisI | GCNGC | 2 cut(s) | 126, 300 |
| BlsI | GCNGC | 2 cut(s) | 127, 301 |
| BmiI | GGNNCC | 1 cut(s) | 352 |
| BsaI | GGTCTC | 1 cut(s) | 234 |
| Bse21I | CCTNAGG | 1 cut(s) | 36 |
| BseRI | GAGGAG | 3 cut(s) | 20, 353, 356 |
| BseXI | GCAGC | 2 cut(s) | 112, 286 |
| BshNI | GGYRCC | 1 cut(s) | 350 |
| BsmAI | GTCTC | 3 cut(s) | 10, 162, 234 |
| Bso31I | GGTCTC | 1 cut(s) | 234 |
| BspACI | CCGC | 1 cut(s) | 22 |
| BspLI | GGNNCC | 1 cut(s) | 352 |
| BspMAI | CTGCAG | 1 cut(s) | 304 |
| BspT107I | GGYRCC | 1 cut(s) | 350 |
| BspTNI | GGTCTC | 1 cut(s) | 234 |
| BssSI | CACGAG | 1 cut(s) | 178 |
| Bst2BI | CACGAG | 1 cut(s) | 178 |
| Bst4CI | ACNGT | 1 cut(s) | 56 |
| Bst6I | CTCTTC | 1 cut(s) | 330 |
| BstDEI | CTNAG | 1 cut(s) | 36 |
| BstMAI | GTCTC | 3 cut(s) | 10, 162, 234 |
| BstNSI | RCATGY | 1 cut(s) | 190 |
| BstSFI | CTRYAG | 1 cut(s) | 300 |
| BstV1I | GCAGC | 2 cut(s) | 112, 286 |
| Bsu36I | CCTNAGG | 1 cut(s) | 36 |
| BtsI | GCAGTG | 1 cut(s) | 91 |
| BtsIMutI | CAGTG | 3 cut(s) | 61, 73, 91 |
| Csp6I | GTAC | 1 cut(s) | 351 |
| CviAII | CATG | 3 cut(s) | 154, 187, 387 |
| CviJI | RGCY | 3 cut(s) | 198, 210, 250 |
| CviKI_1 | RGCY | 3 cut(s) | 198, 210, 250 |
| CviQI | GTAC | 1 cut(s) | 351 |
| DdeI | CTNAG | 1 cut(s) | 36 |
| Eam1104I | CTCTTC | 1 cut(s) | 330 |
| EarI | CTCTTC | 1 cut(s) | 330 |
| Eco31I | GGTCTC | 1 cut(s) | 234 |
| Eco57I | CTGAAG | 1 cut(s) | 266 |
| Eco81I | CCTNAGG | 1 cut(s) | 36 |
| FaeI | CATG | 3 cut(s) | 157, 190, 390 |
| FaiI | YATR | 9 cut(s) | 106, 114, 155, 165, 188, 195, 357, 382, 388 |
| FatI | CATG | 3 cut(s) | 153, 186, 386 |
| Fnu4HI | GCNGC | 2 cut(s) | 126, 300 |
| Fsp4HI | GCNGC | 2 cut(s) | 126, 300 |
| GluI | GCNGC | 2 cut(s) | 126, 300 |
| Hin1II | CATG | 3 cut(s) | 157, 190, 390 |
| HindIII | AAGCTT | 1 cut(s) | 208 |
| HinfI | GANTC | 2 cut(s) | 176, 322 |
| Hpy166II | GTNNAC | 1 cut(s) | 329 |
| Hpy188I | TCNGA | 3 cut(s) | 15, 234, 246 |
| Hpy8I | GTNNAC | 1 cut(s) | 329 |
| HpyAV | CCTTC | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 3 cut(s) | 74, 84, 302 |
| HpyF3I | CTNAG | 1 cut(s) | 36 |
| Hsp92II | CATG | 3 cut(s) | 157, 190, 390 |
| KpnI | GGTACC | 1 cut(s) | 354 |
| LmnI | GCTCC | 1 cut(s) | 343 |
| LpnPI | CCDG | 1 cut(s) | 117 |
| Lsp1109I | GCAGC | 2 cut(s) | 112, 286 |
| MaeIII | GTNAC | 1 cut(s) | 259 |
| MboII | GAAGA | 1 cut(s) | 347 |
| MluCI | AATT | 1 cut(s) | 61 |
| MlyI | GAGTC | 1 cut(s) | 170 |
| MmeI | TCCRAC | 1 cut(s) | 246 |
| MnlI | CCTC | 4 cut(s) | 139, 331, 334, 358 |
| MseI | TTAA | 1 cut(s) | 237 |
| NlaIII | CATG | 3 cut(s) | 157, 190, 390 |
| NlaIV | GGNNCC | 1 cut(s) | 352 |
| NspI | RCATGY | 1 cut(s) | 190 |
| PfeI | GAWTC | 1 cut(s) | 322 |
| PkrI | GCNGC | 2 cut(s) | 127, 301 |
| PleI | GAGTC | 1 cut(s) | 170 |
| PpsI | GAGTC | 1 cut(s) | 170 |
| PspN4I | GGNNCC | 1 cut(s) | 352 |
| PstI | CTGCAG | 1 cut(s) | 304 |
| RsaI | GTAC | 1 cut(s) | 352 |
| RsaNI | GTAC | 1 cut(s) | 351 |
| SaqAI | TTAA | 1 cut(s) | 237 |
| SatI | GCNGC | 2 cut(s) | 126, 300 |
| SchI | GAGTC | 1 cut(s) | 170 |
| SetI | ASST | 7 cut(s) | 42, 95, 164, 200, 212, 356, 369 |
| SfcI | CTRYAG | 1 cut(s) | 300 |
| Sse9I | AATT | 1 cut(s) | 61 |
| SsiI | CCGC | 1 cut(s) | 22 |
| TaaI | ACNGT | 1 cut(s) | 56 |
| TaqI | TCGA | 1 cut(s) | 369 |
| TasI | AATT | 1 cut(s) | 61 |
| TfiI | GAWTC | 1 cut(s) | 322 |
| Tru1I | TTAA | 1 cut(s) | 237 |
| Tru9I | TTAA | 1 cut(s) | 237 |
| TscAI | CASTG | 3 cut(s) | 61, 73, 91 |
| TseI | GCWGC | 2 cut(s) | 125, 299 |
| TspGWI | ACGGA | 1 cut(s) | 18 |
| TspRI | CASTG | 3 cut(s) | 61, 73, 91 |
| XapI | RAATTY | 1 cut(s) | 61 |
| XceI | RCATGY | 1 cut(s) | 190 |