Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002222

Physical Location & Seq

Genomic Coordinates Forward (+)

4175819 .. 4182246

Gene Structure 6428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG052900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGCAGAGTGTCTTGGATTTGCTCCTGATACAGAGATATATGCGTTTCGTGTGTTTACAGATGCACAGCTTATTGCAGGTATCATACACATCATGGTTCCTTGATGCATTCAACTATGCCATTGCGACCAATATGGATGTACTGAACTTGAGCATAGGTGGACCTGATTACTTGGACCTCCCATTTGTGGAGAAGGTCTGGGAAATAACAGCAAACAACATAATTATGGTTTCAGCAATTGGAAACGATGGACCGCTTTATGGGACTCTAAATAATCCAGCAGACCAAAGTGATGTCATTGGTGTTGGTGGCATCGACTACAGTGATCACATTGCTTCTTTTTCCTCACGAGGCATGAGTACTTGGGAGATGCCGCACGGTTACGGTCGTGTTAAGCCAGATGTCGTTGCATATGGACGGGAAATTATGGGATCCAAGATCAGTACAGGCTGTAAAAGCTTATCTGGCACTAGTGTGGCAAGTCCTGTGGTTGCTGGTATGGTTTGTCTGCTTGTGAGTGTTATCCCTGAAAGCAGTCGGAAGGATACTTTAAATCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAACTCGGTGGTCCAAATATGTATGAGCAGGGTGCAGGGAGGGTTGATCTGTTAGAATCATATGAAATCCTGAAGAATTACCAACCTCGTGCCAGCATCTTCCCTAGTATTCTTGATTATACAGACTGCCCATACTCTTGGCCCTTCTGTCGTCAGCCACTTTATGCTGGTGCCATGCCTGTTATCTTCAATGCTACCATTCTAAATGGAATGGGTGTAATTGGCTATGTTGAAAGTCCACCAACTTGGCATCCTTCAGATGAAGTAGGGAATCTTCTAAGTATTCACTTTACATATTCTAATGTTATCTGGCCTTGGACAGGTTATTTAGCGCTTCACATGCAAATTAAGGACGAAGGTGCACAATTTTCAGGAGAGATTAATGGCAATGTTACTCTTAGGGTATACAGTCCTCCATCTCCAGGAGAAAAGAATCTTCGGATTAGCACTTGTGTGCTTCAGTTAAGATTGAAGATTGTTCCAACTCCACCAAGATCAAAACGAGTTTTGTGGGACCAGTTTCACAGTATTAAATACCCTCCAGGTTACATCCCTAGAGACTCTTTGGATGTTCGCAATGACATTCTTGACTGGCATGGAGATCACCTGCATACAAATTTTCACATTATGTTCAACATGTTACGAGATGCTGGGTATTATGTAGAAACACTTGGTTCGCCTCTTACTTGCTTTGATGCTCTTCGATATGGGACACTTCTTCTGGTAGATCTTGAAGAAGAGTACTTTCAGGAGGAGATTGAGAAGCTGCAAGATGATGTTCTTAATTCTGGACTGGGATTGGTTGTGTTTTCTGAGTGGTATAATGTAGACACGATGGTGAAGATGAGATTCTTTGATGATAACACACGTAGCTGGTGGACTCCAGTCACTGGAGGTGCAAATGTTCCAGCTTTGAACGACCTGCTGGCTCCGTTTGGGATTGCATTTGGAGATAAGATTCTGAATGGTGATTTTTCTATCAATGGTGAGCAAAGTCGGTATGCATCTGGAACGGATATTGTGAGGTTTCCGAAAGGGGGTTATGTACACAAGTTCCCTTTCCTGGATAGCTCTGAAAGTGGGGCCACTCAGAATGTACTTCGGGATCCTGAGGTGACAATGGCAGATTCTCCCATTCTTGGTCTTGTACAGGTGGGTGAAGGTCGTGTTGTAGTGTATGGAGATTCTAACTGTTTGGACAGCAGTCATATGGTAACTAATTGTTATTGGCTCTTGAGAAAAATGTTAGATTTCACCGGTGGAAACATCAGAGATCCTGTGCTTTTTTCAAGCTCGGTCAAACAAAGTTCACCTTTATATATGGAAGATAACCAATTACCGTCTCGTAGAACAGATGTGAATTTTTCTACATATTCCGCTGTAGTGGGGAAGGAATTGATCTGTGGGAGTGACTCTGTATTTGAAATATGGGGGACTAAAGGTTACAGTTTACAGGTCAGGGGAACAAACAGAAGATTACCAGGCTCTTCTGTGTCTAATCCAGGTAGAGGTTTGAATTCTACTGTCAAGGCTTCCCATTTGGAGCATTCCAAGTTGACACTGGGAAATAGAAGTGATCCTTCGGAATATAGGGATGAGGTAAGCAAACAAAATATCTGGCTAGAATGGTTATTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0004252 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0005789 GO:0005794 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006984 GO:0006986 GO:0006996 GO:0007033 GO:0007040 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008237 GO:0009628 GO:0009651 GO:0009889 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016043 GO:0016787 GO:0017171 GO:0019216 GO:0019218 GO:0019222 GO:0019538 GO:0023052 GO:0030968 GO:0031090 GO:0031293 GO:0031974 GO:0031984 GO:0033554 GO:0033619 GO:0034620 GO:0034976 GO:0035966 GO:0035967 GO:0036211 GO:0036500 GO:0042175 GO:0042221 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043687 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045540 GO:0046890 GO:0050789 GO:0050794 GO:0050810 GO:0050896 GO:0051716 GO:0062012 GO:0065007 GO:0070011 GO:0070013 GO:0070887 GO:0071310 GO:0071704 GO:0071840 GO:0080090 GO:0080171 GO:0090181 GO:0098588 GO:0098791 GO:0098827 GO:0106118 GO:0140096 GO:1901564 GO:1902930

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Peptidase_S8

Protein Analysis

743

Amino Acids

82.66

Weight (kDa)

5.2

Isoelectric Point (pI)

43.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	28 - 204	3.4e-26	Subtilase family
MBTPS1_3rd	PF23094	232 - 360	1.7e-54	MBTPS1, third Ig-like domain
MBTPS1_4th	PF23090	361 - 632	2.9e-146	MBTPS1, fourth GATase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19660 AT5G19660 AT5G19660
fragaria_vesca	FvH4_1g04670 FvH4_1g04670 FvH4_1g04670 FvH4_1g04670 FvH4_1g04670 FvH4_1g04670 FvH4_1g04670
malus_domestica	MD02G1045500.v1.1 MD15G1183900.v1.1
prunus_persica	Prupe.7G232300_v2.0.a1 Prupe.7G232300_v2.0.a1
pyrus_communis	pycom02g03790 pycom02g03800 pycom02g03810 pycom15g16550
rosa_chinensis	RchiOBHm_Chr2g0090281
rosa_laevigata	RLG00000008526 RLG00000016094 RLG00000021848 RLG00000032088
rosa_multiflora	Rmu_sc0000714.1_g000011 Rmu_sc0004834.1_g000013 Rmu_sc0005276.1_g000005
rosa_roxburghii	Rroxscaffold_2G00085240 Rroxscaffold_2G00151320
rosa_rugosa	Rorug02G0006200
rosa_samantha	Rh1DG037900 Rh2AG052100 Rh2BG050700 Rh2CG052900 Rh2DG052000 Rh5AG367600 Rh5AG473400 Rh5BG377700 Rh5BG493700 Rh5CG401100 Rh5CG517700 Rh5DG391000 Rh5DG505700
rosa_wichuraiana	Rw2G004480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1209
Acc36I	ACCTGC	3 cut(s)	67, 1209, 1524
AccB1I	GGYRCC	1 cut(s)	764
AccB7I	CCANNNNNTGG	1 cut(s)	1484
AccI	GTMKAC	2 cut(s)	999, 1422
AciI	CCGC	3 cut(s)	254, 374, 1971
AclWI	GGATC	6 cut(s)	426, 439, 1694, 1707, 1862, 2165
AcsI	RAATTY	3 cut(s)	1210, 1954, 2110
AcuI	CTGAAG	3 cut(s)	686, 834, 1037
AfaI	GTAC	7 cut(s)	141, 361, 445, 1337, 1641, 1692, 1743
AfeI	AGCGCT	1 cut(s)	927
AfiI	CCNNNNNNNGG	9 cut(s)	187, 260, 914, 1016, 1484, 1631, 1657, 1733, 2102
AflIII	ACRYGT	2 cut(s)	1230, 1460
AgeI	ACCGGT	1 cut(s)	1850
AhlI	ACTAGT	1 cut(s)	470
AjnI	CCWGG	5 cut(s)	1015, 1135, 1656, 2074, 2095
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
AleI	CACNNNNGTG	3 cut(s)	473, 1046, 1430
AluBI	AGCT	7 cut(s)	69, 459, 1360, 1467, 1505, 1665, 1887
AluI	AGCT	7 cut(s)	69, 459, 1360, 1467, 1505, 1665, 1887
Alw21I	GWGCWC	1 cut(s)	958
Alw26I	GTCTC	2 cut(s)	1146, 1941
Alw44I	GTGCAC	1 cut(s)	954
AlwI	GGATC	6 cut(s)	426, 439, 1694, 1707, 1862, 2165
AlwNI	CAGNNNCTG	1 cut(s)	1484
Aor51HI	AGCGCT	1 cut(s)	927
AoxI	GGCC	3 cut(s)	734, 905, 1677
ApaLI	GTGCAC	1 cut(s)	954
ApeKI	GCWGC	2 cut(s)	590, 1360
ApoI	RAATTY	3 cut(s)	1210, 1954, 2110
ArsI	GACNNNNNNTTYG	4 cut(s)	167, 199, 1997, 2029
AseI	ATTAAT	1 cut(s)	975
AsiGI	ACCGGT	1 cut(s)	1850
AspLEI	GCGC	1 cut(s)	928
AspS9I	GGNCC	7 cut(s)	161, 175, 251, 605, 735, 1108, 1677
AsuHPI	GGTGA	8 cut(s)	1190, 1444, 1574, 1592, 1720, 1763, 1840, 1896
AvaII	GGWCC	5 cut(s)	161, 175, 251, 605, 1108
AxyI	CCTNAGG	1 cut(s)	1704
BaeGI	GKGCMC	1 cut(s)	958
BamHI	GGATCC	2 cut(s)	431, 1699
BanI	GGYRCC	1 cut(s)	764
BarI	GAAGNNNNNNTAC	2 cut(s)	852, 884
BauI	CACGAG	2 cut(s)	348, 681
Bbv12I	GWGCWC	1 cut(s)	958
BbvI	GCAGC	2 cut(s)	577, 1347
BccI	CCATC	3 cut(s)	242, 1018, 1423
BciT130I	CCWGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
BciVI	GTATCC	1 cut(s)	538
BclI	TGATCA	1 cut(s)	325
BcoDI	GTCTC	2 cut(s)	1146, 1941
BcuI	ACTAGT	1 cut(s)	470
BfaI	CTAG	4 cut(s)	471, 699, 1149, 2216
BfmI	CTRYAG	2 cut(s)	319, 1974
BfoI	RGCGCY	1 cut(s)	929
BfuAI	ACCTGC	3 cut(s)	67, 1209, 1524
BfuI	GTATCC	1 cut(s)	538
BglII	AGATCT	1 cut(s)	1321
BisI	GCNGC	3 cut(s)	374, 591, 1361
BlsI	GCNGC	3 cut(s)	375, 592, 1362
BmcAI	AGTACT	2 cut(s)	361, 1337
Bme1390I	CCNGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
Bme18I	GGWCC	5 cut(s)	161, 175, 251, 605, 1108
BmgT120I	GGNCC	7 cut(s)	161, 175, 251, 605, 735, 1108, 1677
BmiI	GGNNCC	7 cut(s)	98, 433, 766, 1109, 1524, 1678, 1701
BmrFI	CCNGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
BmrI	ACTGGG	2 cut(s)	1397, 2165
BmsI	GCATC	9 cut(s)	51, 94, 321, 360, 699, 853, 1231, 1279, 1607
BmuI	ACTGGG	2 cut(s)	1397, 2165
BoxI	GACNNNNGTC	2 cut(s)	1478, 1797
BpmI	CTGGAG	4 cut(s)	999, 1119, 1461, 1506
BpuEI	CTTGAG	2 cut(s)	169, 1849
BsaAI	YACGTR	1 cut(s)	1463
BsaJI	CCNNGG	1 cut(s)	908
BsaWI	WCCGGW	1 cut(s)	1850
Bsc4I	CCNNNNNNNGG	9 cut(s)	187, 260, 914, 1016, 1484, 1631, 1657, 1733, 2102
Bse118I	RCCGGY	1 cut(s)	1850
Bse1I	ACTGG	6 cut(s)	1111, 1190, 1392, 1478, 1489, 2160
Bse21I	CCTNAGG	1 cut(s)	1704
Bse3DI	GCAATG	4 cut(s)	120, 330, 988, 1177
BseBI	CCWGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
BseDI	CCNNGG	1 cut(s)	908
BseGI	GGATG	5 cut(s)	142, 844, 1143, 1168, 2194
BseLI	CCNNNNNNNGG	9 cut(s)	187, 260, 914, 1016, 1484, 1631, 1657, 1733, 2102
BseMI	GCAATG	4 cut(s)	120, 330, 988, 1177
BseMII	CTCAG	3 cut(s)	1398, 1695, 1697
BseNI	ACTGG	6 cut(s)	1111, 1190, 1392, 1478, 1489, 2160
BseRI	GAGGAG	1 cut(s)	1361
BseSI	GKGCMC	1 cut(s)	958
BseXI	GCAGC	2 cut(s)	577, 1347
BseYI	CCCAGC	1 cut(s)	1244
BsgI	GTGCAG	1 cut(s)	648
Bsh1285I	CGRYCG	1 cut(s)	388
BshFI	GGCC	3 cut(s)	736, 907, 1679
BshNI	GGYRCC	1 cut(s)	764
BshTI	ACCGGT	1 cut(s)	1850
BsiEI	CGRYCG	1 cut(s)	388
BsiHKAI	GWGCWC	1 cut(s)	958
BsiSI	CCGG	1 cut(s)	1851
BslFI	GGGAC	4 cut(s)	277, 1121, 1318, 2041
BslI	CCNNNNNNNGG	9 cut(s)	187, 260, 914, 1016, 1484, 1631, 1657, 1733, 2102
BsmAI	GTCTC	2 cut(s)	1146, 1941
BsmBI	CGTCTC	1 cut(s)	1941
BsmFI	GGGAC	4 cut(s)	277, 1121, 1318, 2041
BsmI	GAATGC	2 cut(s)	107, 2140
BsnI	GGCC	3 cut(s)	736, 907, 1679
Bsp1286I	GDGCHC	1 cut(s)	958
Bsp1407I	TGTACA	2 cut(s)	1639, 1741
BspACI	CCGC	3 cut(s)	254, 374, 1971
BspANI	GGCC	3 cut(s)	736, 907, 1679
BspCNI	CTCAG	3 cut(s)	1399, 1696, 1696
BspLI	GGNNCC	7 cut(s)	98, 433, 766, 1109, 1524, 1678, 1701
BspMI	ACCTGC	3 cut(s)	67, 1209, 1524
BspPI	GGATC	6 cut(s)	426, 439, 1694, 1707, 1862, 2165
BspQI	GCTCTTC	2 cut(s)	1299, 2086
BspT107I	GGYRCC	1 cut(s)	764
BsrDI	GCAATG	4 cut(s)	120, 330, 988, 1177
BsrFI	RCCGGY	1 cut(s)	1850
BsrGI	TGTACA	2 cut(s)	1639, 1741
BsrI	ACTGG	6 cut(s)	1111, 1190, 1392, 1478, 1489, 2160
BssAI	RCCGGY	1 cut(s)	1850
BssECI	CCNNGG	1 cut(s)	908
BssNAI	GTATAC	1 cut(s)	1000
BssSI	CACGAG	2 cut(s)	348, 681
BssT1I	CCWWGG	1 cut(s)	908
Bst1107I	GTATAC	1 cut(s)	1000
Bst2BI	CACGAG	2 cut(s)	348, 681
Bst2UI	CCWGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
Bst4CI	ACNGT	9 cut(s)	323, 380, 386, 1004, 1121, 1787, 1935, 2042, 2119
Bst6I	CTCTTC	3 cut(s)	1299, 1326, 2086
BstAUI	TGTACA	2 cut(s)	1639, 1741
BstBAI	YACGTR	1 cut(s)	1463
BstC8I	GCNNGC	3 cut(s)	562, 688, 1521
BstDEI	CTNAG	5 cut(s)	872, 992, 1407, 1683, 1704
BstENI	CCTNNNNNAGG	1 cut(s)	912
BstF5I	GGATG	5 cut(s)	142, 844, 1143, 1168, 2194
BstH2I	RGCGCY	1 cut(s)	929
BstHHI	GCGC	1 cut(s)	928
BstMAI	GTCTC	2 cut(s)	1146, 1941
BstMCI	CGRYCG	1 cut(s)	388
BstMWI	GCNNNNNNNGC	3 cut(s)	456, 465, 934
BstNI	CCWGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
BstNSI	RCATGY	2 cut(s)	937, 1234
BstPAI	GACNNNNGTC	2 cut(s)	1478, 1797
BstSCI	CCNGG	5 cut(s)	1015, 1135, 1656, 2074, 2095
BstSFI	CTRYAG	2 cut(s)	319, 1974
BstSLI	GKGCMC	1 cut(s)	958
BstV1I	GCAGC	2 cut(s)	577, 1347
BstX2I	RGATCY	4 cut(s)	431, 1321, 1699, 1867
BstXI	CCANNNNNNTGG	2 cut(s)	732, 840
BstYI	RGATCY	4 cut(s)	431, 1321, 1699, 1867
BstZ17I	GTATAC	1 cut(s)	1000
Bsu36I	CCTNAGG	1 cut(s)	1704
BsuI	GTATCC	1 cut(s)	538
BsuRI	GGCC	3 cut(s)	736, 907, 1679
BtsCI	GGATG	5 cut(s)	142, 844, 1143, 1168, 2194
BtsIMutI	CAGTG	3 cut(s)	328, 1482, 2153
BveI	ACCTGC	3 cut(s)	67, 1209, 1524
Cac8I	GCNNGC	3 cut(s)	562, 688, 1521
CaiI	CAGNNNCTG	1 cut(s)	1484
CfoI	GCGC	1 cut(s)	928
Cfr10I	RCCGGY	1 cut(s)	1850
Cfr13I	GGNCC	7 cut(s)	161, 175, 251, 605, 735, 1108, 1677
Csp6I	GTAC	7 cut(s)	140, 360, 444, 1336, 1640, 1691, 1742
CspAI	ACCGGT	1 cut(s)	1850
CspCI	CAANNNNNGTGG	2 cut(s)	468, 503
CviAII	CATG	7 cut(s)	93, 355, 565, 769, 934, 1190, 1231
CviQI	GTAC	7 cut(s)	140, 360, 444, 1336, 1640, 1691, 1742
DdeI	CTNAG	5 cut(s)	872, 992, 1407, 1683, 1704
DraI	TTTAAA	1 cut(s)	552
Eam1104I	CTCTTC	3 cut(s)	1299, 1326, 2086
EarI	CTCTTC	3 cut(s)	1299, 1326, 2086
Eco130I	CCWWGG	1 cut(s)	908
Eco47I	GGWCC	5 cut(s)	161, 175, 251, 605, 1108
Eco47III	AGCGCT	1 cut(s)	927
Eco57I	CTGAAG	3 cut(s)	686, 834, 1037
Eco81I	CCTNAGG	1 cut(s)	1704
EcoNI	CCTNNNNNAGG	1 cut(s)	912
EcoRI	GAATTC	1 cut(s)	2110
EcoRII	CCWGG	5 cut(s)	1015, 1135, 1656, 2074, 2095
EcoT14I	CCWWGG	1 cut(s)	908
EcoT22I	ATGCAT	2 cut(s)	109, 1600
ErhI	CCWWGG	1 cut(s)	908
Esp3I	CGTCTC	1 cut(s)	1941
FaeI	CATG	7 cut(s)	96, 358, 568, 772, 937, 1193, 1234
FalI	AAGNNNNNCTT	4 cut(s)	1891, 1923, 2158, 2190
FaqI	GGGAC	4 cut(s)	277, 1121, 1318, 2041
FatI	CATG	7 cut(s)	92, 354, 564, 768, 933, 1189, 1230
FauNDI	CATATG	3 cut(s)	412, 655, 1803
FbaI	TGATCA	1 cut(s)	325
FblI	GTMKAC	2 cut(s)	999, 1422
Fnu4HI	GCNGC	3 cut(s)	374, 591, 1361
FokI	GGATG	5 cut(s)	149, 831, 1130, 1175, 2201
Fsp4HI	GCNGC	3 cut(s)	374, 591, 1361
FspBI	CTAG	4 cut(s)	471, 699, 1149, 2216
GlaI	GCGC	1 cut(s)	927
GluI	GCNGC	3 cut(s)	374, 591, 1361
GsaI	CCCAGC	1 cut(s)	1248
GsuI	CTGGAG	4 cut(s)	999, 1119, 1461, 1506
HaeII	RGCGCY	1 cut(s)	929
HaeIII	GGCC	3 cut(s)	736, 907, 1679
HapII	CCGG	1 cut(s)	1851
HhaI	GCGC	1 cut(s)	928
Hin1II	CATG	7 cut(s)	96, 358, 568, 772, 937, 1193, 1234
Hin6I	GCGC	1 cut(s)	926
HinP1I	GCGC	1 cut(s)	926
HincII	GTYRAC	1 cut(s)	2151
HindII	GTYRAC	1 cut(s)	2151
HindIII	AAGCTT	1 cut(s)	457
HpaII	CCGG	1 cut(s)	1851
HphI	GGTGA	8 cut(s)	1190, 1444, 1574, 1592, 1720, 1763, 1840, 1896
HpyAV	CCTTC	8 cut(s)	187, 535, 748, 858, 944, 1748, 1978, 2184
HpyCH4III	ACNGT	9 cut(s)	323, 380, 386, 1004, 1121, 1787, 1935, 2042, 2119
HpyCH4IV	ACGT	1 cut(s)	1462
HpyF10VI	GCNNNNNNNGC	3 cut(s)	456, 465, 934
HpyF3I	CTNAG	5 cut(s)	872, 992, 1407, 1683, 1704
HpySE526I	ACGT	1 cut(s)	1462
Hsp92II	CATG	7 cut(s)	96, 358, 568, 772, 937, 1193, 1234
HspAI	GCGC	1 cut(s)	926
Ksp22I	TGATCA	1 cut(s)	325
LguI	GCTCTTC	2 cut(s)	1299, 2086
LmnI	GCTCC	3 cut(s)	27, 1528, 2137
Lsp1109I	GCAGC	2 cut(s)	577, 1347
LweI	GCATC	9 cut(s)	51, 94, 321, 360, 699, 853, 1231, 1279, 1607
MaeI	CTAG	4 cut(s)	471, 699, 1149, 2216
MaeII	ACGT	1 cut(s)	1462
MaeIII	GTNAC	9 cut(s)	380, 985, 1139, 1233, 1480, 1708, 1807, 2003, 2036
MfeI	CAATTG	1 cut(s)	237
MflI	RGATCY	4 cut(s)	431, 1321, 1699, 1867
MhlI	GDGCHC	1 cut(s)	958
MlyI	GAGTC	4 cut(s)	259, 1148, 1468, 2000
MmeI	TCCRAC	2 cut(s)	518, 1100
Mph1103I	ATGCAT	2 cut(s)	109, 1600
MseI	TTAA	7 cut(s)	393, 551, 942, 975, 1058, 1125, 1377
MslI	CAYNNNNRTG	4 cut(s)	224, 473, 1046, 1430
MspA1I	CMGCKG	1 cut(s)	1973
MspI	CCGG	1 cut(s)	1851
MspR9I	CCNGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
MunI	CAATTG	1 cut(s)	237
Mva1269I	GAATGC	2 cut(s)	107, 2140
MvaI	CCWGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
MwoI	GCNNNNNNNGC	3 cut(s)	456, 465, 934
NdeI	CATATG	3 cut(s)	412, 655, 1803
NlaIII	CATG	7 cut(s)	96, 358, 568, 772, 937, 1193, 1234
NlaIV	GGNNCC	7 cut(s)	98, 433, 766, 1109, 1524, 1678, 1701
NmuCI	GTSAC	3 cut(s)	1480, 1708, 2003
NsiI	ATGCAT	2 cut(s)	109, 1600
NspI	RCATGY	2 cut(s)	937, 1234
OliI	CACNNNNGTG	3 cut(s)	473, 1046, 1430
PaqCI	CACCTGC	1 cut(s)	1209
PciI	ACATGT	1 cut(s)	1230
PciSI	GCTCTTC	2 cut(s)	1299, 2086
PctI	GAATGC	2 cut(s)	107, 2140
PfeI	GAWTC	7 cut(s)	650, 865, 1027, 1443, 1552, 1721, 1778
PflMI	CCANNNNNTGG	1 cut(s)	1484
PfoI	TCCNGGA	2 cut(s)	1015, 1656
PinAI	ACCGGT	1 cut(s)	1850
PkrI	GCNGC	3 cut(s)	375, 592, 1362
PleI	GAGTC	4 cut(s)	259, 1148, 1468, 2000
PpsI	GAGTC	4 cut(s)	259, 1148, 1468, 2000
Ppu21I	YACGTR	1 cut(s)	1463
PscI	ACATGT	1 cut(s)	1230
PshAI	GACNNNNGTC	2 cut(s)	1478, 1797
PshBI	ATTAAT	1 cut(s)	975
Psp6I	CCWGG	5 cut(s)	1015, 1135, 1656, 2074, 2095
PspFI	CCCAGC	1 cut(s)	1244
PspGI	CCWGG	5 cut(s)	1015, 1135, 1656, 2074, 2095
PspN4I	GGNNCC	7 cut(s)	98, 433, 766, 1109, 1524, 1678, 1701
PspPI	GGNCC	7 cut(s)	161, 175, 251, 605, 735, 1108, 1677
PstNI	CAGNNNCTG	1 cut(s)	1484
PsuI	RGATCY	4 cut(s)	431, 1321, 1699, 1867
RsaI	GTAC	7 cut(s)	141, 361, 445, 1337, 1641, 1692, 1743
RsaNI	GTAC	7 cut(s)	140, 360, 444, 1336, 1640, 1691, 1742
RseI	CAYNNNNRTG	4 cut(s)	224, 473, 1046, 1430
SapI	GCTCTTC	2 cut(s)	1299, 2086
SaqAI	TTAA	7 cut(s)	393, 551, 942, 975, 1058, 1125, 1377
SatI	GCNGC	3 cut(s)	374, 591, 1361
Sau96I	GGNCC	7 cut(s)	161, 175, 251, 605, 735, 1108, 1677
ScaI	AGTACT	2 cut(s)	361, 1337
SchI	GAGTC	4 cut(s)	259, 1148, 1468, 2000
ScrFI	CCNGG	5 cut(s)	1017, 1137, 1658, 2076, 2097
SduI	GDGCHC	1 cut(s)	958
SfaNI	GCATC	9 cut(s)	51, 94, 321, 360, 699, 853, 1231, 1279, 1607
SfcI	CTRYAG	2 cut(s)	319, 1974
SgrAI	CRCCGGYG	1 cut(s)	1850
SinI	GGWCC	5 cut(s)	161, 175, 251, 605, 1108
SmiMI	CAYNNNNRTG	4 cut(s)	224, 473, 1046, 1430
SmlI	CTYRAG	2 cut(s)	148, 1828
SmoI	CTYRAG	2 cut(s)	148, 1828
SpeI	ACTAGT	1 cut(s)	470
SsiI	CCGC	3 cut(s)	254, 374, 1971
SspMI	CTAG	4 cut(s)	471, 699, 1149, 2216
StyD4I	CCNGG	5 cut(s)	1015, 1135, 1656, 2074, 2095
StyI	CCWWGG	1 cut(s)	908
TaaI	ACNGT	9 cut(s)	323, 380, 386, 1004, 1121, 1787, 1935, 2042, 2119
TaiI	ACGT	1 cut(s)	1465
TaqI	TCGA	2 cut(s)	315, 1297
TaqII	GACCGA	1 cut(s)	1879
TatI	WGTACW	7 cut(s)	139, 359, 443, 1335, 1639, 1690, 1741
TauI	GCSGC	1 cut(s)	376
TfiI	GAWTC	7 cut(s)	650, 865, 1027, 1443, 1552, 1721, 1778
Tru1I	TTAA	7 cut(s)	393, 551, 942, 975, 1058, 1125, 1377
Tru9I	TTAA	7 cut(s)	393, 551, 942, 975, 1058, 1125, 1377
TscAI	CASTG	3 cut(s)	328, 1489, 2160
TseFI	GTSAC	3 cut(s)	1480, 1708, 2003
TseI	GCWGC	2 cut(s)	590, 1360
Tsp45I	GTSAC	3 cut(s)	1480, 1708, 2003
TspDTI	ATGAA	3 cut(s)	581, 672, 870
TspGWI	ACGGA	2 cut(s)	1515, 1622
TspRI	CASTG	3 cut(s)	328, 1489, 2160
Van91I	CCANNNNNTGG	1 cut(s)	1484
VneI	GTGCAC	1 cut(s)	954
VpaK11BI	GGWCC	5 cut(s)	161, 175, 251, 605, 1108
VspI	ATTAAT	1 cut(s)	975
XagI	CCTNNNNNAGG	1 cut(s)	912
XapI	RAATTY	3 cut(s)	1210, 1954, 2110
XceI	RCATGY	2 cut(s)	937, 1234
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2152
XmiI	GTMKAC	2 cut(s)	999, 1422
XspI	CTAG	4 cut(s)	471, 699, 1149, 2216
ZrmI	AGTACT	2 cut(s)	361, 1337
Zsp2I	ATGCAT	2 cut(s)	109, 1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.