Ataxin 2 SM domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57960 AT5G57960 |
| fragaria_vesca | FvH4_2g39280 |
| malus_domestica | MD15G1022100.v1.1 |
| prunus_persica | Prupe.1G373900_v2.0.a1 |
| pyrus_communis | pycom15g01840 |
| rosa_chinensis | RchiOBHm_Chr6g0301721 |
| rosa_laevigata | RLG00000011228 |
| rosa_multiflora | Rmu_sc0001136.1_g000058 Rmu_sc0005276.1_g000003 Rmu_sc0008351.1_g000013 Rmu_sc0034934.1_g000001 Rmu_sc0038373.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00146020 Rroxscaffold_3G00220120 Rroxscaffold_7G00166480 |
| rosa_rugosa | Rorug01G0306600 Rorug02G0225700 Rorug05G0101700 Rorug06G0308400 Rorug06G0308500 Rorug07G0166300 Rorug07G0203600 Rorug07G0349900 |
| rosa_samantha | Rh3AG070600 Rh3DG349200 Rh6AG420900 Rh6BG427600 Rh6CG434200 Rh6DG421100 Rh7AG504700 Rh7BG476500 |
| rosa_wichuraiana | Rw6G036430 Rw7G027640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 29 |
| AfaI | GTAC | 2 cut(s) | 79, 108 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 29 |
| AgsI | TTSAA | 2 cut(s) | 102, 190 |
| AluBI | AGCT | 3 cut(s) | 26, 68, 129 |
| AluI | AGCT | 3 cut(s) | 26, 68, 129 |
| AsuHPI | GGTGA | 1 cut(s) | 65 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 70, 102 |
| BccI | CCATC | 1 cut(s) | 23 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 29 |
| Bse3DI | GCAATG | 1 cut(s) | 166 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 29 |
| BseMI | GCAATG | 1 cut(s) | 166 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 29 |
| BsmI | GAATGC | 1 cut(s) | 208 |
| BsrDI | GCAATG | 1 cut(s) | 166 |
| Bst4CI | ACNGT | 1 cut(s) | 82 |
| BstC8I | GCNNGC | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 1 cut(s) | 157 |
| CseI | GACGC | 1 cut(s) | 195 |
| Csp6I | GTAC | 2 cut(s) | 78, 107 |
| CviAII | CATG | 2 cut(s) | 134, 167 |
| CviJI | RGCY | 4 cut(s) | 26, 68, 129, 155 |
| CviKI_1 | RGCY | 4 cut(s) | 26, 68, 129, 155 |
| CviQI | GTAC | 2 cut(s) | 78, 107 |
| FaeI | CATG | 2 cut(s) | 137, 170 |
| FaiI | YATR | 8 cut(s) | 47, 74, 93, 135, 168, 182, 195, 211 |
| FatI | CATG | 2 cut(s) | 133, 166 |
| HgaI | GACGC | 1 cut(s) | 195 |
| Hin1II | CATG | 2 cut(s) | 137, 170 |
| HinfI | GANTC | 1 cut(s) | 190 |
| HphI | GGTGA | 1 cut(s) | 65 |
| HpyCH4III | ACNGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 1 cut(s) | 115 |
| Hsp92II | CATG | 2 cut(s) | 137, 170 |
| LpnPI | CCDG | 4 cut(s) | 24, 36, 36, 141 |
| MaeIII | GTNAC | 2 cut(s) | 53, 139 |
| MboII | GAAGA | 1 cut(s) | 78 |
| MnlI | CCTC | 2 cut(s) | 164, 168 |
| MspA1I | CMGCKG | 1 cut(s) | 26 |
| Mva1269I | GAATGC | 1 cut(s) | 208 |
| NlaIII | CATG | 2 cut(s) | 137, 170 |
| NmuCI | GTSAC | 1 cut(s) | 53 |
| PctI | GAATGC | 1 cut(s) | 208 |
| PfeI | GAWTC | 1 cut(s) | 190 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 29 |
| PvuII | CAGCTG | 1 cut(s) | 26 |
| RsaI | GTAC | 2 cut(s) | 79, 108 |
| RsaNI | GTAC | 2 cut(s) | 78, 107 |
| SetI | ASST | 4 cut(s) | 28, 70, 108, 131 |
| SgeI | CNNG | 8 cut(s) | 21, 35, 51, 63, 146, 162, 168, 179 |
| TaaI | ACNGT | 1 cut(s) | 82 |
| TfiI | GAWTC | 1 cut(s) | 190 |
| TseFI | GTSAC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 3 cut(s) | 17, 122, 177 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 29 |