The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31300 AT4G31300 AT4G31300 |
| fragaria_vesca | FvH4_2g36480 |
| malus_domestica | MD08G1124600.v1.1 MD13G1234400.v1.1 MD15G1103300.v1.1 MD16G1239000.v1.1 |
| prunus_persica | Prupe.1G065200_v2.0.a1 Prupe.1G456200_v2.0.a1 Prupe.1G456200_v2.0.a1 |
| pyrus_communis | pycom08g10330 pycom13g20630 pycom16g19990 |
| rosa_chinensis | RchiOBHm_Chr2g0148551 RchiOBHm_Chr6g0305401 |
| rosa_laevigata | RLG00000008279 RLG00000010894 RLG00000027046 |
| rosa_multiflora | Rmu_sc0002782.1_g000018 Rmu_sc0012564.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00015230 Rroxscaffold_7G00162840 |
| rosa_rugosa | Rorug06G0340100 |
| rosa_samantha | Rh2CG224200 Rh3AG033400 Rh3BG033700 Rh3DG033400 Rh5CG280300 Rh5CG513800 Rh6AG452000 Rh6BG449700 Rh6CG465900 Rh6DG452600 |
| rosa_wichuraiana | Rw6G039380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 1 cut(s) | 88 |
| AluI | AGCT | 1 cut(s) | 88 |
| ApeKI | GCWGC | 1 cut(s) | 94 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BfmI | CTRYAG | 1 cut(s) | 27 |
| BisI | GCNGC | 1 cut(s) | 95 |
| BlsI | GCNGC | 1 cut(s) | 96 |
| BseMII | CTCAG | 1 cut(s) | 50 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BspCNI | CTCAG | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 2 cut(s) | 24, 99 |
| BstDEI | CTNAG | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 94 |
| BstSFI | CTRYAG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 2 cut(s) | 24, 99 |
| CviJI | RGCY | 4 cut(s) | 26, 88, 97, 133 |
| CviKI_1 | RGCY | 4 cut(s) | 26, 88, 97, 133 |
| DdeI | CTNAG | 1 cut(s) | 36 |
| FaiI | YATR | 4 cut(s) | 54, 91, 142, 144 |
| FauNDI | CATATG | 1 cut(s) | 142 |
| Fnu4HI | GCNGC | 1 cut(s) | 95 |
| Fsp4HI | GCNGC | 1 cut(s) | 95 |
| GluI | GCNGC | 1 cut(s) | 95 |
| HinfI | GANTC | 1 cut(s) | 32 |
| Hpy188I | TCNGA | 1 cut(s) | 49 |
| HpyCH4III | ACNGT | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 1 cut(s) | 22 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 94 |
| HpyF3I | CTNAG | 1 cut(s) | 36 |
| LpnPI | CCDG | 4 cut(s) | 8, 23, 111, 115 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| MboII | GAAGA | 1 cut(s) | 59 |
| MluCI | AATT | 1 cut(s) | 16 |
| MmeI | TCCRAC | 1 cut(s) | 72 |
| MnlI | CCTC | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 94 |
| NdeI | CATATG | 1 cut(s) | 142 |
| PfeI | GAWTC | 1 cut(s) | 32 |
| PkrI | GCNGC | 1 cut(s) | 96 |
| SatI | GCNGC | 1 cut(s) | 95 |
| SetI | ASST | 2 cut(s) | 42, 90 |
| SfcI | CTRYAG | 1 cut(s) | 27 |
| SgeI | CNNG | 4 cut(s) | 35, 50, 110, 142 |
| Sse9I | AATT | 1 cut(s) | 16 |
| TaaI | ACNGT | 1 cut(s) | 138 |
| TasI | AATT | 1 cut(s) | 16 |
| TfiI | GAWTC | 1 cut(s) | 32 |
| TseI | GCWGC | 1 cut(s) | 94 |
| TspDTI | ATGAA | 1 cut(s) | 59 |