Rh4AG391600
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
69787918 .. 69788106
189 bp
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UTR
Exon/CDS
Intron
Rh4AG391600.1

Sequence Viewer

Length: 189 bp
ATGGATGCAATCAACTTCGATGTGCCGTTAAATGAAGCAGTAAAGATGTGGCAGGCTGCGGAGGGCAAAAGCAACATTGATGAATCCTCATCTTCATCGATCTTTCCTAGCGGGCATACCACCCAGACCAGCCTTCCTAATCGGCCTTGTGGATTTGCAGAGTCGTTTACATCATCAGATGGGCGGTAA

Protein Analysis

62

Amino Acids

6.65

Weight (kDa)

4.5

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 59, 111, 184
AoxI GGCC 1 cut(s) 143
ApeKI GCWGC 1 cut(s) 56
BbvI GCAGC 1 cut(s) 43
BccI CCATC 1 cut(s) 173
BceAI ACGGC 1 cut(s) 10
BfaI CTAG 1 cut(s) 108
BisI GCNGC 1 cut(s) 57
BlsI GCNGC 1 cut(s) 58
Bsa29I ATCGAT 1 cut(s) 98
BseCI ATCGAT 1 cut(s) 98
BseGI GGATG 1 cut(s) 10
BseXI GCAGC 1 cut(s) 43
BshFI GGCC 1 cut(s) 145
BshVI ATCGAT 1 cut(s) 98
BsnI GGCC 1 cut(s) 145
Bsp143I GATC 1 cut(s) 99
BspACI CCGC 3 cut(s) 59, 111, 184
BspANI GGCC 1 cut(s) 145
BspDI ATCGAT 1 cut(s) 98
BssMI GATC 1 cut(s) 99
BstC8I GCNNGC 2 cut(s) 54, 113
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 1 cut(s) 102
BstMBI GATC 1 cut(s) 99
BstV1I GCAGC 1 cut(s) 43
Bsu15I ATCGAT 1 cut(s) 98
BsuRI GGCC 1 cut(s) 145
BsuTUI ATCGAT 1 cut(s) 98
BtsCI GGATG 1 cut(s) 10
Cac8I GCNNGC 2 cut(s) 54, 113
ClaI ATCGAT 1 cut(s) 98
CviJI RGCY 3 cut(s) 56, 132, 145
CviKI_1 RGCY 3 cut(s) 56, 132, 145
DpnI GATC 1 cut(s) 101
DpnII GATC 1 cut(s) 99
FaiI YATR 1 cut(s) 117
FauI CCCGC 1 cut(s) 104
Fnu4HI GCNGC 1 cut(s) 57
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 1 cut(s) 57
FspBI CTAG 1 cut(s) 108
GluI GCNGC 1 cut(s) 57
HaeIII GGCC 1 cut(s) 145
HinfI GANTC 2 cut(s) 83, 161
Hpy166II GTNNAC 1 cut(s) 168
Hpy188I TCNGA 1 cut(s) 178
Hpy8I GTNNAC 1 cut(s) 168
HpyAV CCTTC 1 cut(s) 143
HpyCH4V TGCA 2 cut(s) 8, 158
Kzo9I GATC 1 cut(s) 99
LpnPI CCDG 3 cut(s) 38, 137, 142
Lsp1109I GCAGC 1 cut(s) 43
MaeI CTAG 1 cut(s) 108
MalI GATC 1 cut(s) 101
MboI GATC 1 cut(s) 99
MboII GAAGA 1 cut(s) 84
MlyI GAGTC 1 cut(s) 170
MnlI CCTC 2 cut(s) 55, 97
MseI TTAA 1 cut(s) 29
NdeII GATC 1 cut(s) 99
PfeI GAWTC 1 cut(s) 83
PkrI GCNGC 1 cut(s) 58
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
SaqAI TTAA 1 cut(s) 29
SatI GCNGC 1 cut(s) 57
Sau3AI GATC 1 cut(s) 99
SchI GAGTC 1 cut(s) 170
SgeI CNNG 6 cut(s) 65, 120, 124, 136, 141, 159
SsiI CCGC 3 cut(s) 59, 111, 184
SspMI CTAG 1 cut(s) 108
TaqI TCGA 2 cut(s) 18, 98
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 1 cut(s) 29
Tru9I TTAA 1 cut(s) 29
TseI GCWGC 1 cut(s) 56
TspDTI ATGAA 3 cut(s) 48, 84, 96
XspI CTAG 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.