tRNA rRNA
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0420261 RchiOBHm_Chr4g0420281 |
| rosa_laevigata | RLG00000008411 RLG00000009409 |
| rosa_multiflora | Rmu_sc0001009.1_g000027 Rmu_sc0003539.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00362910 Rroxscaffold_6G00399630 |
| rosa_rugosa | Rorug04G0161700 |
| rosa_samantha | Rh1AG127300 Rh1CG121200 Rh2AG194800 Rh2BG274300 Rh2BG558800 Rh2CG315200 Rh2CG528700 Rh2DG202300 Rh4AG223700 Rh4BG226500 Rh4CG233600 Rh4CG237100 Rh4CG237400 Rh4CG237900 Rh5AG169700 Rh7CG456900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 290 |
| AcuI | CTGAAG | 1 cut(s) | 143 |
| AfaI | GTAC | 1 cut(s) | 43 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 290 |
| AgsI | TTSAA | 2 cut(s) | 195, 313 |
| AluBI | AGCT | 4 cut(s) | 19, 135, 157, 329 |
| AluI | AGCT | 4 cut(s) | 19, 135, 157, 329 |
| AoxI | GGCC | 2 cut(s) | 234, 298 |
| ApeKI | GCWGC | 1 cut(s) | 326 |
| AspS9I | GGNCC | 1 cut(s) | 299 |
| AsuHPI | GGTGA | 1 cut(s) | 164 |
| BbvI | GCAGC | 1 cut(s) | 338 |
| BceAI | ACGGC | 1 cut(s) | 313 |
| BfaI | CTAG | 2 cut(s) | 54, 87 |
| BisI | GCNGC | 1 cut(s) | 327 |
| BlsI | GCNGC | 1 cut(s) | 328 |
| BmgT120I | GGNCC | 1 cut(s) | 299 |
| BmsI | GCATC | 1 cut(s) | 352 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 290 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 290 |
| BseXI | GCAGC | 1 cut(s) | 338 |
| BshFI | GGCC | 2 cut(s) | 236, 300 |
| BslFI | GGGAC | 2 cut(s) | 187, 308 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 290 |
| BsmFI | GGGAC | 2 cut(s) | 187, 308 |
| BsnI | GGCC | 2 cut(s) | 236, 300 |
| Bsp143I | GATC | 1 cut(s) | 147 |
| BspANI | GGCC | 2 cut(s) | 236, 300 |
| BssMI | GATC | 1 cut(s) | 147 |
| Bst4CI | ACNGT | 2 cut(s) | 288, 322 |
| BstEII | GGTNACC | 1 cut(s) | 356 |
| BstKTI | GATC | 1 cut(s) | 150 |
| BstMBI | GATC | 1 cut(s) | 147 |
| BstPI | GGTNACC | 1 cut(s) | 356 |
| BstV1I | GCAGC | 1 cut(s) | 338 |
| BsuRI | GGCC | 2 cut(s) | 236, 300 |
| Cfr13I | GGNCC | 1 cut(s) | 299 |
| Csp6I | GTAC | 1 cut(s) | 42 |
| CviAII | CATG | 1 cut(s) | 214 |
| CviJI | RGCY | 6 cut(s) | 19, 135, 157, 236, 300, 329 |
| CviKI_1 | RGCY | 6 cut(s) | 19, 135, 157, 236, 300, 329 |
| CviQI | GTAC | 1 cut(s) | 42 |
| DpnI | GATC | 1 cut(s) | 149 |
| DpnII | GATC | 1 cut(s) | 147 |
| Eco32I | GATATC | 2 cut(s) | 25, 79 |
| Eco57I | CTGAAG | 1 cut(s) | 143 |
| Eco91I | GGTNACC | 1 cut(s) | 356 |
| EcoO65I | GGTNACC | 1 cut(s) | 356 |
| EcoRV | GATATC | 2 cut(s) | 25, 79 |
| FaeI | CATG | 1 cut(s) | 217 |
| FaiI | YATR | 8 cut(s) | 93, 117, 209, 215, 261, 279, 291, 376 |
| FaqI | GGGAC | 2 cut(s) | 187, 308 |
| FatI | CATG | 1 cut(s) | 213 |
| Fnu4HI | GCNGC | 1 cut(s) | 327 |
| Fsp4HI | GCNGC | 1 cut(s) | 327 |
| FspBI | CTAG | 2 cut(s) | 54, 87 |
| GluI | GCNGC | 1 cut(s) | 327 |
| HaeIII | GGCC | 2 cut(s) | 236, 300 |
| Hin1II | CATG | 1 cut(s) | 217 |
| HinfI | GANTC | 3 cut(s) | 32, 67, 110 |
| HphI | GGTGA | 1 cut(s) | 164 |
| Hpy166II | GTNNAC | 2 cut(s) | 44, 122 |
| Hpy8I | GTNNAC | 2 cut(s) | 44, 122 |
| HpyCH4III | ACNGT | 2 cut(s) | 288, 322 |
| HpyCH4V | TGCA | 2 cut(s) | 217, 343 |
| Hsp92II | CATG | 1 cut(s) | 217 |
| Kzo9I | GATC | 1 cut(s) | 147 |
| LpnPI | CCDG | 4 cut(s) | 56, 218, 315, 353 |
| Lsp1109I | GCAGC | 1 cut(s) | 338 |
| LweI | GCATC | 1 cut(s) | 352 |
| MaeI | CTAG | 2 cut(s) | 54, 87 |
| MaeIII | GTNAC | 2 cut(s) | 316, 356 |
| MalI | GATC | 1 cut(s) | 149 |
| MboI | GATC | 1 cut(s) | 147 |
| MboII | GAAGA | 1 cut(s) | 157 |
| MluCI | AATT | 2 cut(s) | 4, 125 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MnlI | CCTC | 3 cut(s) | 175, 219, 347 |
| MseI | TTAA | 2 cut(s) | 137, 245 |
| NdeII | GATC | 1 cut(s) | 147 |
| NlaIII | CATG | 1 cut(s) | 217 |
| PfeI | GAWTC | 2 cut(s) | 67, 110 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 290 |
| PkrI | GCNGC | 1 cut(s) | 328 |
| PleI | GAGTC | 1 cut(s) | 40 |
| PpsI | GAGTC | 1 cut(s) | 40 |
| PspEI | GGTNACC | 1 cut(s) | 356 |
| PspPI | GGNCC | 1 cut(s) | 299 |
| RsaI | GTAC | 1 cut(s) | 43 |
| RsaNI | GTAC | 1 cut(s) | 42 |
| SaqAI | TTAA | 2 cut(s) | 137, 245 |
| SatI | GCNGC | 1 cut(s) | 327 |
| Sau3AI | GATC | 1 cut(s) | 147 |
| Sau96I | GGNCC | 1 cut(s) | 299 |
| SchI | GAGTC | 1 cut(s) | 41 |
| SetI | ASST | 7 cut(s) | 21, 75, 137, 159, 331, 358, 363 |
| SfaNI | GCATC | 1 cut(s) | 352 |
| Sse9I | AATT | 2 cut(s) | 4, 125 |
| SspMI | CTAG | 2 cut(s) | 54, 87 |
| TaaI | ACNGT | 2 cut(s) | 288, 322 |
| TasI | AATT | 2 cut(s) | 4, 125 |
| TatI | WGTACW | 1 cut(s) | 41 |
| TfiI | GAWTC | 2 cut(s) | 67, 110 |
| Tru1I | TTAA | 2 cut(s) | 137, 245 |
| Tru9I | TTAA | 2 cut(s) | 137, 245 |
| TseI | GCWGC | 1 cut(s) | 326 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 290 |
| XspI | CTAG | 2 cut(s) | 54, 87 |