Rh4CG315600

Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
57805799 .. 57809576
3778 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG315600.1

Sequence Viewer

Length: 1578 bp
ATGGCGACCCTTCCATCCACCCATTGCTGCCGTACTTACTCCTCCTCATCATCGGCGTCGTATTCTTCCGTACACAGAAGCCTCCAGAGGGTGGCCGTTTCTCCGAGTCCGCAACGTTTCGTCTCCGCCAAGGTTTCTCTGCAGTCTCAATCCGTTTCGCAGCAAAATGTTGTCAGCATGCAAGATGTGGCTCCAGCAGTGAAGCCTGTTGAGAATGAAACTGCTTTCAAGAAATTGAAAGACGGGTTGCTGTCAGCTACGTCTGGGTCTGTGGAGGAAAGTAAAGACGCAAGTGGGTTTAGTTTTGAAGAATCTGAGTCTACTGTGAGTATTACTGTGGTTGGAGCATCTGGGGACCTTGCAAAGAAGAAGATATTCCCGGCTCTTTTCGCACTTTATTATGAGGGTTGCCTCCCTAAACACTTTACTATTTGTGGTTATGCTCGGAGTAAGATGACTGATGCTGAGCTTAGAACCATGGTTAGCAAGACGCTTACTTGCAGAATTGACCAGAGGGAGAACTGTGGCGAAAAGATGGACCAATTTCTTGAAAGATGTTTCTACCACTCTGGTCAGTATGATTCACAGGATCACTTTGCACAGCTGGACAAGAAACTAAAGGAACATGAGGCTGGAAGAATTCCTAACCGCCTGTTCTATCTATCTATTCCTCCAAACATATTCATAGATGCGGTTCGCTGTGCAAGCTTGTCTGCTTCATCTGGTAATGGCTGGACTAGAGTTATTGTTGAGAAACCATTTGGCCGAGATTCAGAATCATCTGCTGCTTTGACCAAAGCCCTCAAGCAGTACCTAGAAGAGGATCAGATATTCAGGATAGACCACTATCTGGGCAAGGAGCTAGTGGAAAACCTTTCAGTTCTTCGCTTTTCCAATCTTATTTTTGAACCCTTGTGGTCAAGGCAGTACATAAGGAATGTGCAGTTAATATTCTCTGAAGATTTTGGCACTGAAGGGCGTGGAGGGTACTTTGATAATTATGGGATAATAAGAGACATAATGCAGAATCACTTGCTTCAAATACTGGCGCTCTTTGCAATGGAAACCCCTGTCAGTTTGGATGCAGAAGATATTAGAAATGAAAAGGTCAAAGTTTTGCGTTCCATGAGGCCATTGCAACTTGAAAATGTGGTAACAGGGCAATACAAGAGCCATGTCAGAGGAGGTATTACTTACCCGGCCTACACTGATGACAAAACTGTACCCAAAGACAGTTTGACTCCAACATTTGCAGCAGCTGCACTCTTCATAGACAATGCAAGATGGGATGGGGTGCCTTTCCTAATGAAAGCTGGGAAAGCATTACATAATAAGAGGGCTGAGATAAGGGTACAGTTTCGGCATGTTCCTGGAAATTTGTATAATCGAAACATTGGAACAGATCTTGATCGTGCTACTAATGAACTTGTAATCCGAGTACAGCCTGATGAAGCTATCTTTCTGAAGATCAACAACAAAGTCCCTGGTTTGGGAATGCGGTTGGACAGGAGTAATTTGAATCTTCATTATGCAGCCAGGTACTTTAAAAATAGGTTTGCTGGAGCTTTGAGAGTATGA

Protein Analysis

525

Amino Acids

59.04

Weight (kDa)

8.96

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G6PD_N PF00479 113 - 291 1.9e-58 Glucose-6-phosphate dehydrogenase, NAD binding domain
G6PD_C PF02781 294 - 515 2.3e-87 Glucose-6-phosphate dehydrogenase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1294
AccB7I CCANNNNNTGG 2 cut(s) 91, 850
AccI GTMKAC 1 cut(s) 320
AciI CCGC 5 cut(s) 110, 126, 649, 692, 1498
AclI AACGTT 1 cut(s) 115
AclWI GGATC 2 cut(s) 597, 831
AcoI YGGCCR 2 cut(s) 93, 763
AcsI RAATTY 2 cut(s) 639, 1375
AcuI CTGAAG 3 cut(s) 978, 993, 1484
AcyI GRCGYC 1 cut(s) 56
AfaI GTAC 9 cut(s) 34, 72, 812, 929, 989, 1224, 1353, 1440, 1541
AfiI CCNNNNNNNGG 6 cut(s) 88, 91, 820, 850, 1489, 1490
AgsI TTSAA 8 cut(s) 229, 238, 308, 551, 908, 1040, 1145, 1519
AjnI CCWGG 3 cut(s) 1369, 1483, 1535
AloI GAACNNNNNNTCC 2 cut(s) 1416, 1448
AluBI AGCT 9 cut(s) 257, 469, 604, 708, 862, 1259, 1313, 1454, 1565
AluI AGCT 9 cut(s) 257, 469, 604, 708, 862, 1259, 1313, 1454, 1565
Alw26I GTCTC 3 cut(s) 127, 150, 1008
AlwI GGATC 2 cut(s) 597, 831
AlwNI CAGNNNCTG 1 cut(s) 1259
AoxI GGCC 4 cut(s) 93, 763, 1130, 1200
ApeKI GCWGC 7 cut(s) 27, 160, 785, 1253, 1256, 1259, 1532
ApoI RAATTY 2 cut(s) 639, 1375
Asp700I GAANNNNTTC 1 cut(s) 374
AspLEI GCGC 1 cut(s) 1051
AspS9I GGNCC 2 cut(s) 355, 538
AsuC2I CCSGG 2 cut(s) 380, 1199
AvaII GGWCC 2 cut(s) 355, 538
BanI GGYRCC 1 cut(s) 1294
BbvI GCAGC 7 cut(s) 14, 172, 772, 1246, 1265, 1268, 1544
BccI CCATC 4 cut(s) 22, 529, 1278, 1283
BceAI ACGGC 2 cut(s) 15, 80
BciT130I CCWGG 3 cut(s) 1371, 1485, 1537
BcnI CCSGG 2 cut(s) 380, 1199
BcoDI GTCTC 3 cut(s) 127, 150, 1008
BfaI CTAG 3 cut(s) 738, 815, 863
BfmI CTRYAG 1 cut(s) 140
BfoI RGCGCY 1 cut(s) 1052
BglII AGATCT 1 cut(s) 1402
BisI GCNGC 7 cut(s) 28, 161, 786, 1254, 1257, 1260, 1533
BlpI GCTNAGC 1 cut(s) 465
BlsI GCNGC 7 cut(s) 29, 162, 787, 1255, 1258, 1261, 1534
Bme1390I CCNGG 5 cut(s) 380, 1199, 1371, 1485, 1537
Bme18I GGWCC 2 cut(s) 355, 538
BmgT120I GGNCC 2 cut(s) 355, 538
BmiI GGNNCC 3 cut(s) 192, 356, 1296
BmrFI CCNGG 5 cut(s) 380, 1199, 1371, 1485, 1537
BmsI GCATC 4 cut(s) 356, 451, 679, 1072
BpmI CTGGAG 2 cut(s) 68, 177
Bpu1102I GCTNAGC 1 cut(s) 465
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 2 cut(s) 380, 1199
BsaBI GATNNNNATC 1 cut(s) 1407
BsaHI GRCGYC 1 cut(s) 56
BsaJI CCNNGG 3 cut(s) 129, 477, 1483
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 91, 820, 850, 1489, 1490
Bse1I ACTGG 1 cut(s) 1050
Bse3DI GCAATG 3 cut(s) 22, 1065, 1133
Bse8I GATNNNNATC 1 cut(s) 1407
BseBI CCWGG 3 cut(s) 1371, 1485, 1537
BseDI CCNNGG 3 cut(s) 129, 477, 1483
BseGI GGATG 3 cut(s) 14, 1087, 1294
BseJI GATNNNNATC 1 cut(s) 1407
BseLI CCNNNNNNNGG 6 cut(s) 88, 91, 820, 850, 1489, 1490
BseMI GCAATG 3 cut(s) 22, 1065, 1133
BseMII CTCAG 3 cut(s) 306, 456, 1332
BseNI ACTGG 1 cut(s) 1050
BseRI GAGGAG 3 cut(s) 31, 34, 1197
BseXI GCAGC 7 cut(s) 14, 172, 772, 1246, 1265, 1268, 1544
BseYI CCCAGC 1 cut(s) 1313
BsgI GTGCAG 2 cut(s) 962, 1245
BshFI GGCC 4 cut(s) 95, 765, 1132, 1202
BshNI GGYRCC 1 cut(s) 1294
BsiSI CCGG 2 cut(s) 380, 1199
BslFI GGGAC 2 cut(s) 368, 1466
BslI CCNNNNNNNGG 6 cut(s) 88, 91, 820, 850, 1489, 1490
BsmAI GTCTC 3 cut(s) 127, 150, 1008
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 2 cut(s) 368, 1466
BsmI GAATGC 1 cut(s) 1500
BsnI GGCC 4 cut(s) 95, 765, 1132, 1202
Bsp143I GATC 5 cut(s) 589, 823, 1402, 1408, 1467
Bsp1720I GCTNAGC 1 cut(s) 465
Bsp19I CCATGG 1 cut(s) 477
BspACI CCGC 5 cut(s) 110, 126, 649, 692, 1498
BspANI GGCC 4 cut(s) 95, 765, 1132, 1202
BspCNI CTCAG 3 cut(s) 307, 457, 1333
BspLI GGNNCC 3 cut(s) 192, 356, 1296
BspMAI CTGCAG 1 cut(s) 144
BspPI GGATC 2 cut(s) 597, 831
BspT107I GGYRCC 1 cut(s) 1294
BsrDI GCAATG 3 cut(s) 22, 1065, 1133
BsrI ACTGG 1 cut(s) 1050
BssECI CCNNGG 3 cut(s) 129, 477, 1483
BssMI GATC 5 cut(s) 589, 823, 1402, 1408, 1467
BssNI GRCGYC 1 cut(s) 56
BssT1I CCWWGG 2 cut(s) 129, 477
Bst2UI CCWGG 3 cut(s) 1371, 1485, 1537
Bst4CI ACNGT 6 cut(s) 325, 337, 524, 1222, 1235, 1356
Bst6I CTCTTC 2 cut(s) 813, 1271
BstACI GRCGYC 1 cut(s) 56
BstAPI GCANNNNNTGC 1 cut(s) 1259
BstC8I GCNNGC 2 cut(s) 179, 706
BstDEI CTNAG 4 cut(s) 315, 465, 470, 1341
BstDSI CCRYGG 1 cut(s) 477
BstENI CCTNNNNNAGG 1 cut(s) 818
BstF5I GGATG 3 cut(s) 14, 1087, 1294
BstH2I RGCGCY 1 cut(s) 1052
BstHHI GCGC 1 cut(s) 1051
BstKTI GATC 5 cut(s) 592, 826, 1405, 1411, 1470
BstMAI GTCTC 3 cut(s) 127, 150, 1008
BstMBI GATC 5 cut(s) 589, 823, 1402, 1408, 1467
BstMWI GCNNNNNNNGC 5 cut(s) 389, 705, 1055, 1259, 1319
BstNI CCWGG 3 cut(s) 1371, 1485, 1537
BstNSI RCATGY 2 cut(s) 181, 1367
BstSCI CCNGG 5 cut(s) 378, 1197, 1369, 1483, 1535
BstSFI CTRYAG 1 cut(s) 140
BstV1I GCAGC 7 cut(s) 14, 172, 772, 1246, 1265, 1268, 1544
BstX2I RGATCY 1 cut(s) 1402
BstYI RGATCY 1 cut(s) 1402
BsuRI GGCC 4 cut(s) 95, 765, 1132, 1202
BtgI CCRYGG 1 cut(s) 477
BtsCI GGATG 3 cut(s) 14, 1087, 1294
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 3 cut(s) 204, 969, 1206
Cac8I GCNNGC 2 cut(s) 179, 706
CaiI CAGNNNCTG 1 cut(s) 1259
CfoI GCGC 1 cut(s) 1051
Cfr13I GGNCC 2 cut(s) 355, 538
CseI GACGC 3 cut(s) 45, 296, 499
Csp6I GTAC 9 cut(s) 33, 71, 811, 928, 988, 1223, 1352, 1439, 1540
CviAII CATG 6 cut(s) 178, 478, 626, 1126, 1175, 1364
CviQI GTAC 9 cut(s) 33, 71, 811, 928, 988, 1223, 1352, 1439, 1540
DdeI CTNAG 4 cut(s) 315, 465, 470, 1341
DpnI GATC 5 cut(s) 591, 825, 1404, 1410, 1469
DpnII GATC 5 cut(s) 589, 823, 1402, 1408, 1467
DraI TTTAAA 1 cut(s) 1546
EaeI YGGCCR 2 cut(s) 93, 763
Eam1104I CTCTTC 2 cut(s) 813, 1271
EarI CTCTTC 2 cut(s) 813, 1271
EciI GGCGGA 1 cut(s) 115
Eco130I CCWWGG 2 cut(s) 129, 477
Eco47I GGWCC 2 cut(s) 355, 538
Eco57I CTGAAG 3 cut(s) 978, 993, 1484
EcoNI CCTNNNNNAGG 1 cut(s) 818
EcoO109I RGGNCCY 1 cut(s) 355
EcoRI GAATTC 1 cut(s) 639
EcoRII CCWGG 3 cut(s) 1369, 1483, 1535
EcoT14I CCWWGG 2 cut(s) 129, 477
ErhI CCWWGG 2 cut(s) 129, 477
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 6 cut(s) 181, 481, 629, 1129, 1178, 1367
FaqI GGGAC 2 cut(s) 368, 1466
FatI CATG 6 cut(s) 177, 477, 625, 1125, 1174, 1363
FblI GTMKAC 1 cut(s) 320
Fnu4HI GCNGC 7 cut(s) 28, 161, 786, 1254, 1257, 1260, 1533
FokI GGATG 2 cut(s) 1094, 1301
Fsp4HI GCNGC 7 cut(s) 28, 161, 786, 1254, 1257, 1260, 1533
FspBI CTAG 3 cut(s) 738, 815, 863
GlaI GCGC 1 cut(s) 1050
GluI GCNGC 7 cut(s) 28, 161, 786, 1254, 1257, 1260, 1533
GsaI CCCAGC 1 cut(s) 1317
GsuI CTGGAG 2 cut(s) 68, 177
HaeII RGCGCY 1 cut(s) 1052
HaeIII GGCC 4 cut(s) 95, 765, 1132, 1202
HapII CCGG 2 cut(s) 380, 1199
HgaI GACGC 3 cut(s) 45, 296, 499
HhaI GCGC 1 cut(s) 1051
Hin1I GRCGYC 1 cut(s) 56
Hin1II CATG 6 cut(s) 181, 481, 629, 1129, 1178, 1367
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HindIII AAGCTT 1 cut(s) 706
HinfI GANTC 9 cut(s) 106, 311, 317, 581, 770, 776, 1027, 1240, 1519
HpaII CCGG 2 cut(s) 380, 1199
Hpy166II GTNNAC 2 cut(s) 73, 321
Hpy188I TCNGA 9 cut(s) 105, 316, 447, 775, 828, 958, 1181, 1436, 1464
Hpy188III TCNNGA 5 cut(s) 85, 229, 548, 835, 1406
Hpy8I GTNNAC 2 cut(s) 73, 321
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 2 cut(s) 20, 968
HpyCH4III ACNGT 6 cut(s) 325, 337, 524, 1222, 1235, 1356
HpyCH4IV ACGT 2 cut(s) 115, 260
HpyF10VI GCNNNNNNNGC 5 cut(s) 389, 705, 1055, 1259, 1319
HpyF3I CTNAG 4 cut(s) 315, 465, 470, 1341
HpySE526I ACGT 2 cut(s) 115, 260
Hsp92I GRCGYC 1 cut(s) 56
Hsp92II CATG 6 cut(s) 181, 481, 629, 1129, 1178, 1367
HspAI GCGC 1 cut(s) 1049
Kzo9I GATC 5 cut(s) 589, 823, 1402, 1408, 1467
LmnI GCTCC 4 cut(s) 196, 344, 859, 1562
Lsp1109I GCAGC 7 cut(s) 14, 172, 772, 1246, 1265, 1268, 1544
LweI GCATC 4 cut(s) 356, 451, 679, 1072
MaeI CTAG 3 cut(s) 738, 815, 863
MaeII ACGT 2 cut(s) 115, 260
MaeIII GTNAC 1 cut(s) 1153
MalI GATC 5 cut(s) 591, 825, 1404, 1410, 1469
MboI GATC 5 cut(s) 589, 823, 1402, 1408, 1467
MflI RGATCY 1 cut(s) 1402
MluCI AATT 7 cut(s) 233, 504, 542, 639, 997, 1375, 1513
MlyI GAGTC 3 cut(s) 115, 326, 1234
MmeI TCCRAC 3 cut(s) 322, 1268, 1482
MroXI GAANNNNTTC 1 cut(s) 374
MseI TTAA 2 cut(s) 947, 1545
MspA1I CMGCKG 2 cut(s) 604, 1259
MspI CCGG 2 cut(s) 380, 1199
MspR9I CCNGG 5 cut(s) 380, 1199, 1371, 1485, 1537
Mva1269I GAATGC 1 cut(s) 1500
MvaI CCWGG 3 cut(s) 1371, 1485, 1537
MwoI GCNNNNNNNGC 5 cut(s) 389, 705, 1055, 1259, 1319
NciI CCSGG 2 cut(s) 380, 1199
NcoI CCATGG 1 cut(s) 477
NdeII GATC 5 cut(s) 589, 823, 1402, 1408, 1467
NlaIII CATG 6 cut(s) 181, 481, 629, 1129, 1178, 1367
NlaIV GGNNCC 3 cut(s) 192, 356, 1296
NmeAIII GCCGAG 1 cut(s) 791
NspI RCATGY 2 cut(s) 181, 1367
PaeI GCATGC 1 cut(s) 181
PctI GAATGC 1 cut(s) 1500
PdmI GAANNNNTTC 1 cut(s) 374
PfeI GAWTC 6 cut(s) 311, 581, 770, 776, 1027, 1519
PflMI CCANNNNNTGG 2 cut(s) 91, 850
PfoI TCCNGGA 1 cut(s) 1369
PkrI GCNGC 7 cut(s) 29, 162, 787, 1255, 1258, 1261, 1534
PleI GAGTC 3 cut(s) 114, 325, 1234
PpsI GAGTC 3 cut(s) 114, 325, 1234
PpuMI RGGWCCY 1 cut(s) 355
Psp1406I AACGTT 1 cut(s) 115
Psp5II RGGWCCY 1 cut(s) 355
Psp6I CCWGG 3 cut(s) 1369, 1483, 1535
PspFI CCCAGC 1 cut(s) 1313
PspGI CCWGG 3 cut(s) 1369, 1483, 1535
PspN4I GGNNCC 3 cut(s) 192, 356, 1296
PspPI GGNCC 2 cut(s) 355, 538
PspPPI RGGWCCY 1 cut(s) 355
PstI CTGCAG 1 cut(s) 144
PstNI CAGNNNCTG 1 cut(s) 1259
PsuI RGATCY 1 cut(s) 1402
PvuII CAGCTG 2 cut(s) 604, 1259
RsaI GTAC 9 cut(s) 34, 72, 812, 929, 989, 1224, 1353, 1440, 1541
RsaNI GTAC 9 cut(s) 33, 71, 811, 928, 988, 1223, 1352, 1439, 1540
SaqAI TTAA 2 cut(s) 947, 1545
SatI GCNGC 7 cut(s) 28, 161, 786, 1254, 1257, 1260, 1533
Sau3AI GATC 5 cut(s) 589, 823, 1402, 1408, 1467
Sau96I GGNCC 2 cut(s) 355, 538
SchI GAGTC 3 cut(s) 115, 326, 1234
ScrFI CCNGG 5 cut(s) 380, 1199, 1371, 1485, 1537
SfaNI GCATC 4 cut(s) 356, 451, 679, 1072
SfcI CTRYAG 1 cut(s) 140
SinI GGWCC 2 cut(s) 355, 538
SmlI CTYRAG 1 cut(s) 803
SmoI CTYRAG 1 cut(s) 803
SphI GCATGC 1 cut(s) 181
Sse9I AATT 7 cut(s) 233, 504, 542, 639, 997, 1375, 1513
SsiI CCGC 5 cut(s) 110, 126, 649, 692, 1498
SspI AATATT 1 cut(s) 951
SspMI CTAG 3 cut(s) 738, 815, 863
StyD4I CCNGG 5 cut(s) 378, 1197, 1369, 1483, 1535
StyI CCWWGG 2 cut(s) 129, 477
TaaI ACNGT 6 cut(s) 325, 337, 524, 1222, 1235, 1356
TaiI ACGT 2 cut(s) 118, 263
TaqI TCGA 1 cut(s) 1387
TasI AATT 7 cut(s) 233, 504, 542, 639, 997, 1375, 1513
TatI WGTACW 2 cut(s) 927, 1438
TfiI GAWTC 6 cut(s) 311, 581, 770, 776, 1027, 1519
Tru1I TTAA 2 cut(s) 947, 1545
Tru9I TTAA 2 cut(s) 947, 1545
TscAI CASTG 3 cut(s) 204, 976, 1213
TseI GCWGC 7 cut(s) 27, 160, 785, 1253, 1256, 1259, 1532
TspDTI ATGAA 9 cut(s) 231, 673, 708, 1116, 1258, 1322, 1437, 1464, 1514
TspGWI ACGGA 2 cut(s) 58, 142
TspRI CASTG 3 cut(s) 204, 976, 1213
Van91I CCANNNNNTGG 2 cut(s) 91, 850
VpaK11BI GGWCC 2 cut(s) 355, 538
XagI CCTNNNNNAGG 1 cut(s) 818
XapI RAATTY 2 cut(s) 639, 1375
XceI RCATGY 2 cut(s) 181, 1367
XmiI GTMKAC 1 cut(s) 320
XmnI GAANNNNTTC 1 cut(s) 374
XspI CTAG 3 cut(s) 738, 815, 863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.