No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0465261 RchiOBHm_Chr4g0397281 RchiOBHm_Chr4g0432341 |
| rosa_laevigata | RLG00000002093 RLG00000027189 RLG00000035058 |
| rosa_multiflora | Rmu_sc0000361.1_g000006 Rmu_sc0005132.1_g000040 |
| rosa_roxburghii | Rroxscaffold_2G00116760 Rroxscaffold_3G00229200 Rroxscaffold_5G00381150 Rroxscaffold_6G00421220 |
| rosa_rugosa | Rorug04G0065800 Rorug04G0330000 Rorug04G0330200 |
| rosa_samantha | Rh1AG228200 Rh2AG526900 Rh2BG564700 Rh2CG177600 Rh3AG001900 Rh3CG001600 Rh3CG139100 Rh3CG275700 Rh3DG001700 Rh3DG138000 Rh3DG141500 Rh4AG093800 Rh4BG371700 Rh4CG102000 Rh4DG316600 Rh5BG432100 Rh5CG455500 Rh5DG386400 Rh6AG195600 Rh6CG200200 Rh6CG200300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 148, 214 |
| AfaI | GTAC | 1 cut(s) | 233 |
| AgsI | TTSAA | 3 cut(s) | 79, 92, 158 |
| AluBI | AGCT | 2 cut(s) | 87, 153 |
| AluI | AGCT | 2 cut(s) | 87, 153 |
| Alw26I | GTCTC | 2 cut(s) | 95, 161 |
| AoxI | GGCC | 1 cut(s) | 31 |
| ApeKI | GCWGC | 2 cut(s) | 4, 48 |
| AsuHPI | GGTGA | 4 cut(s) | 110, 128, 176, 194 |
| BbvI | GCAGC | 2 cut(s) | 16, 60 |
| BccI | CCATC | 2 cut(s) | 130, 196 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 114, 148, 180, 214 |
| BcoDI | GTCTC | 2 cut(s) | 95, 161 |
| BisI | GCNGC | 2 cut(s) | 5, 49 |
| BlsI | GCNGC | 2 cut(s) | 6, 50 |
| BseMII | CTCAG | 1 cut(s) | 249 |
| BseRI | GAGGAG | 1 cut(s) | 97 |
| BseXI | GCAGC | 2 cut(s) | 16, 60 |
| BseYI | CCCAGC | 2 cut(s) | 143, 209 |
| BshFI | GGCC | 1 cut(s) | 33 |
| BsmAI | GTCTC | 2 cut(s) | 95, 161 |
| BsnI | GGCC | 1 cut(s) | 33 |
| BspACI | CCGC | 2 cut(s) | 148, 214 |
| BspANI | GGCC | 1 cut(s) | 33 |
| BspCNI | CTCAG | 1 cut(s) | 248 |
| BstDEI | CTNAG | 1 cut(s) | 235 |
| BstMAI | GTCTC | 2 cut(s) | 95, 161 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 57 |
| BstV1I | GCAGC | 2 cut(s) | 16, 60 |
| BsuRI | GGCC | 1 cut(s) | 33 |
| Csp6I | GTAC | 1 cut(s) | 232 |
| CviJI | RGCY | 4 cut(s) | 33, 51, 87, 153 |
| CviKI_1 | RGCY | 4 cut(s) | 33, 51, 87, 153 |
| CviQI | GTAC | 1 cut(s) | 232 |
| DdeI | CTNAG | 1 cut(s) | 235 |
| EciI | GGCGGA | 1 cut(s) | 163 |
| FaiI | YATR | 2 cut(s) | 114, 180 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 71, 103 |
| FauI | CCCGC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 49 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 49 |
| GluI | GCNGC | 2 cut(s) | 5, 49 |
| GsaI | CCCAGC | 2 cut(s) | 147, 213 |
| HaeIII | GGCC | 1 cut(s) | 33 |
| HphI | GGTGA | 4 cut(s) | 110, 128, 176, 194 |
| Hpy188I | TCNGA | 1 cut(s) | 238 |
| Hpy188III | TCNNGA | 1 cut(s) | 79 |
| HpyCH4IV | ACGT | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 227 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 57 |
| HpyF3I | CTNAG | 1 cut(s) | 235 |
| HpySE526I | ACGT | 1 cut(s) | 230 |
| LmnI | GCTCC | 2 cut(s) | 84, 150 |
| LpnPI | CCDG | 2 cut(s) | 129, 195 |
| Lsp1109I | GCAGC | 2 cut(s) | 16, 60 |
| MaeII | ACGT | 1 cut(s) | 230 |
| MaeIII | GTNAC | 1 cut(s) | 243 |
| MnlI | CCTC | 1 cut(s) | 75 |
| MseI | TTAA | 2 cut(s) | 36, 62 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 57 |
| PkrI | GCNGC | 2 cut(s) | 6, 50 |
| PspFI | CCCAGC | 2 cut(s) | 143, 209 |
| RsaI | GTAC | 1 cut(s) | 233 |
| RsaNI | GTAC | 1 cut(s) | 232 |
| SaqAI | TTAA | 2 cut(s) | 36, 62 |
| SatI | GCNGC | 2 cut(s) | 5, 49 |
| SetI | ASST | 3 cut(s) | 89, 155, 233 |
| SgeI | CNNG | 8 cut(s) | 41, 65, 91, 121, 156, 187, 222, 227 |
| SsiI | CCGC | 2 cut(s) | 148, 214 |
| SspI | AATATT | 1 cut(s) | 14 |
| TaiI | ACGT | 1 cut(s) | 233 |
| TaqI | TCGA | 2 cut(s) | 134, 200 |
| Tru1I | TTAA | 2 cut(s) | 36, 62 |
| Tru9I | TTAA | 2 cut(s) | 36, 62 |
| TseI | GCWGC | 2 cut(s) | 4, 48 |