Jagunal, ER re-organisation during oogenesis
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51510 |
| fragaria_vesca | FvH4_4g13180 FvH4_4g13180 FvH4_4g13180 |
| malus_domestica | MD07G1255100.v1.1 |
| prunus_persica | Prupe.2G278900_v2.0.a1 Prupe.2G279400_v2.0.a1 |
| pyrus_communis | pycom01g19500 pycom07g22830 |
| rosa_chinensis | RchiOBHm_Chr4g0409771 RchiOBHm_Chr4g0413311 |
| rosa_laevigata | RLG00000008225 |
| rosa_multiflora | Rmu_sc0009573.1_g000005 Rmu_sc0009860.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00357240 |
| rosa_rugosa | Rorug04G0119500 Rorug04G0119600 Rorug04G0119700 Rorug04G0119800 Rorug04G0119900 |
| rosa_samantha | Rh2BG188800 Rh4AG179300 Rh4BG178400 Rh4CG189900 Rh4DG174400 Rh5AG393900 Rh6DG341500 Rh7BG185600 |
| rosa_wichuraiana | Rw4G014900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 3 cut(s) | 126, 181, 358 |
| AluBI | AGCT | 2 cut(s) | 40, 116 |
| AluI | AGCT | 2 cut(s) | 40, 116 |
| AoxI | GGCC | 1 cut(s) | 293 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 148, 180 |
| AspS9I | GGNCC | 2 cut(s) | 7, 86 |
| AvaII | GGWCC | 2 cut(s) | 7, 86 |
| BfmI | CTRYAG | 1 cut(s) | 111 |
| Bme18I | GGWCC | 2 cut(s) | 7, 86 |
| BmgT120I | GGNCC | 2 cut(s) | 7, 86 |
| BmiI | GGNNCC | 1 cut(s) | 9 |
| BmsI | GCATC | 1 cut(s) | 206 |
| BoxI | GACNNNNGTC | 1 cut(s) | 150 |
| BsaBI | GATNNNNATC | 1 cut(s) | 101 |
| Bse3DI | GCAATG | 1 cut(s) | 222 |
| Bse8I | GATNNNNATC | 1 cut(s) | 101 |
| BseGI | GGATG | 1 cut(s) | 343 |
| BseJI | GATNNNNATC | 1 cut(s) | 101 |
| BseMI | GCAATG | 1 cut(s) | 222 |
| BshFI | GGCC | 1 cut(s) | 295 |
| BslFI | GGGAC | 2 cut(s) | 158, 326 |
| BsmFI | GGGAC | 2 cut(s) | 158, 326 |
| BsmI | GAATGC | 1 cut(s) | 364 |
| BsnI | GGCC | 1 cut(s) | 295 |
| BspANI | GGCC | 1 cut(s) | 295 |
| BspHI | TCATGA | 2 cut(s) | 264, 286 |
| BspLI | GGNNCC | 1 cut(s) | 9 |
| BsrDI | GCAATG | 1 cut(s) | 222 |
| Bst6I | CTCTTC | 1 cut(s) | 112 |
| BstDEI | CTNAG | 1 cut(s) | 148 |
| BstF5I | GGATG | 1 cut(s) | 343 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 150 |
| BstSFI | CTRYAG | 1 cut(s) | 111 |
| BsuRI | GGCC | 1 cut(s) | 295 |
| BtsCI | GGATG | 1 cut(s) | 343 |
| CciI | TCATGA | 2 cut(s) | 264, 286 |
| Cfr13I | GGNCC | 2 cut(s) | 7, 86 |
| CviAII | CATG | 3 cut(s) | 190, 265, 287 |
| CviJI | RGCY | 4 cut(s) | 29, 40, 116, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 29, 40, 116, 295 |
| DdeI | CTNAG | 1 cut(s) | 148 |
| Eam1104I | CTCTTC | 1 cut(s) | 112 |
| EarI | CTCTTC | 1 cut(s) | 112 |
| Eco147I | AGGCCT | 1 cut(s) | 295 |
| Eco47I | GGWCC | 2 cut(s) | 7, 86 |
| EcoO109I | RGGNCCY | 2 cut(s) | 7, 86 |
| FaeI | CATG | 3 cut(s) | 193, 268, 290 |
| FaiI | YATR | 7 cut(s) | 55, 57, 113, 191, 266, 288, 305 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 17, 49 |
| FaqI | GGGAC | 2 cut(s) | 158, 326 |
| FatI | CATG | 3 cut(s) | 189, 264, 286 |
| FokI | GGATG | 1 cut(s) | 350 |
| HaeIII | GGCC | 1 cut(s) | 295 |
| Hin1II | CATG | 3 cut(s) | 193, 268, 290 |
| HinfI | GANTC | 2 cut(s) | 48, 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188III | TCNNGA | 4 cut(s) | 10, 89, 265, 287 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyAV | CCTTC | 2 cut(s) | 77, 150 |
| HpyCH4V | TGCA | 1 cut(s) | 197 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| HpyF3I | CTNAG | 1 cut(s) | 148 |
| Hsp92II | CATG | 3 cut(s) | 193, 268, 290 |
| LpnPI | CCDG | 3 cut(s) | 102, 277, 357 |
| LweI | GCATC | 1 cut(s) | 206 |
| MaeIII | GTNAC | 2 cut(s) | 169, 247 |
| MboII | GAAGA | 2 cut(s) | 99, 272 |
| MluCI | AATT | 2 cut(s) | 126, 324 |
| MlyI | GAGTC | 1 cut(s) | 57 |
| MmeI | TCCRAC | 1 cut(s) | 187 |
| MspA1I | CMGCKG | 1 cut(s) | 40 |
| Mva1269I | GAATGC | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NlaIII | CATG | 3 cut(s) | 193, 268, 290 |
| NlaIV | GGNNCC | 1 cut(s) | 9 |
| PagI | TCATGA | 2 cut(s) | 264, 286 |
| PceI | AGGCCT | 1 cut(s) | 295 |
| PctI | GAATGC | 1 cut(s) | 364 |
| PfeI | GAWTC | 1 cut(s) | 259 |
| PleI | GAGTC | 1 cut(s) | 56 |
| PpsI | GAGTC | 1 cut(s) | 56 |
| PpuMI | RGGWCCY | 2 cut(s) | 7, 86 |
| PshAI | GACNNNNGTC | 1 cut(s) | 150 |
| Psp5II | RGGWCCY | 2 cut(s) | 7, 86 |
| PspN4I | GGNNCC | 1 cut(s) | 9 |
| PspPI | GGNCC | 2 cut(s) | 7, 86 |
| PspPPI | RGGWCCY | 2 cut(s) | 7, 86 |
| PvuII | CAGCTG | 1 cut(s) | 40 |
| Sau96I | GGNCC | 2 cut(s) | 7, 86 |
| SchI | GAGTC | 1 cut(s) | 57 |
| SetI | ASST | 5 cut(s) | 9, 42, 88, 118, 154 |
| SfaNI | GCATC | 1 cut(s) | 206 |
| SfcI | CTRYAG | 1 cut(s) | 111 |
| SinI | GGWCC | 2 cut(s) | 7, 86 |
| Sse9I | AATT | 2 cut(s) | 126, 324 |
| SseBI | AGGCCT | 1 cut(s) | 295 |
| StuI | AGGCCT | 1 cut(s) | 295 |
| TaqI | TCGA | 2 cut(s) | 154, 166 |
| TasI | AATT | 2 cut(s) | 126, 324 |
| TfiI | GAWTC | 1 cut(s) | 259 |
| TspDTI | ATGAA | 2 cut(s) | 17, 272 |
| VpaK11BI | GGWCC | 2 cut(s) | 7, 86 |