Rh6CG242500

Cell division control protein 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0003461
Physical Location & Seq
Forward (+)
40861847 .. 40863876
2030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG242500.1

Sequence Viewer

Length: 348 bp
ATGGTGACTGGGGATGTACTGTTTGTCGGAATCGGTGATGATCCTAATCAAGCTGATAAGCAGCAATTGCGTGAGATTTTCAGACAGCTAGGAAAACCGATGTTGAATCAGTGTCCAGGACTCACTTCTTTGCCGGCTTGGGAGACCTACCAAGAATGGGAAGGGGAAAAGATGAAAGCTCGGTTCTATTCGGCAGGAGATTTGCCATCGGATCTGCTGGTAGCTACAGTTTCTTTGGAACAAGATGGAGCTGAACTTCTATCAAAAATGCTTACATTTGATCCAGATGAAAGAATCACAGCTAAAGCAGCACTGAACCACCCCTATTTCAAGCAAATGGACGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

115

Amino Acids

12.92

Weight (kDa)

4.55

Isoelectric Point (pI)

31.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 3 - 110 6.2e-06 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 345
AclWI GGATC 3 cut(s) 35, 219, 275
AcyI GRCGYC 1 cut(s) 342
AfaI GTAC 1 cut(s) 18
AfiI CCNNNNNNNGG 1 cut(s) 157
AgsI TTSAA 2 cut(s) 106, 331
AjnI CCWGG 1 cut(s) 115
AluBI AGCT 6 cut(s) 53, 88, 179, 224, 251, 302
AluI AGCT 6 cut(s) 53, 88, 179, 224, 251, 302
Alw26I GTCTC 1 cut(s) 137
AlwI GGATC 3 cut(s) 35, 219, 275
ApeKI GCWGC 2 cut(s) 61, 308
AsuHPI GGTGA 2 cut(s) 16, 47
BbvI GCAGC 2 cut(s) 73, 320
BccI CCATC 2 cut(s) 214, 239
BciT130I CCWGG 1 cut(s) 117
BcoDI GTCTC 1 cut(s) 137
BfaI CTAG 1 cut(s) 89
BfmI CTRYAG 1 cut(s) 225
BisI GCNGC 2 cut(s) 62, 309
BlsI GCNGC 2 cut(s) 63, 310
Bme1390I CCNGG 1 cut(s) 117
BmrFI CCNGG 1 cut(s) 117
BmrI ACTGGG 1 cut(s) 18
BmuI ACTGGG 1 cut(s) 18
BsaBI GATNNNNATC 1 cut(s) 45
BsaHI GRCGYC 1 cut(s) 342
BsaI GGTCTC 1 cut(s) 137
Bsc4I CCNNNNNNNGG 1 cut(s) 157
Bse118I RCCGGY 1 cut(s) 133
Bse1I ACTGG 1 cut(s) 13
Bse8I GATNNNNATC 1 cut(s) 45
BseBI CCWGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 19
BseJI GATNNNNATC 1 cut(s) 45
BseLI CCNNNNNNNGG 1 cut(s) 157
BseNI ACTGG 1 cut(s) 13
BseXI GCAGC 2 cut(s) 73, 320
BsiSI CCGG 1 cut(s) 134
BslI CCNNNNNNNGG 1 cut(s) 157
BsmAI GTCTC 1 cut(s) 137
Bso31I GGTCTC 1 cut(s) 137
Bsp143I GATC 3 cut(s) 40, 211, 280
BspPI GGATC 3 cut(s) 35, 219, 275
BspTNI GGTCTC 1 cut(s) 137
BsrFI RCCGGY 1 cut(s) 133
BsrI ACTGG 1 cut(s) 13
BssAI RCCGGY 1 cut(s) 133
BssMI GATC 3 cut(s) 40, 211, 280
BssNI GRCGYC 1 cut(s) 342
Bst2UI CCWGG 1 cut(s) 117
Bst4CI ACNGT 2 cut(s) 21, 229
BstACI GRCGYC 1 cut(s) 342
BstAPI GCANNNNNTGC 1 cut(s) 67
BstC8I GCNNGC 1 cut(s) 135
BstF5I GGATG 1 cut(s) 19
BstKTI GATC 3 cut(s) 43, 214, 283
BstMAI GTCTC 1 cut(s) 137
BstMBI GATC 3 cut(s) 40, 211, 280
BstMWI GCNNNNNNNGC 2 cut(s) 67, 308
BstNI CCWGG 1 cut(s) 117
BstSCI CCNGG 1 cut(s) 115
BstSFI CTRYAG 1 cut(s) 225
BstV1I GCAGC 2 cut(s) 73, 320
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BtsCI GGATG 1 cut(s) 19
BtsIMutI CAGTG 2 cut(s) 116, 311
Cac8I GCNNGC 1 cut(s) 135
Cfr10I RCCGGY 1 cut(s) 133
Csp6I GTAC 1 cut(s) 17
CviJI RGCY 7 cut(s) 53, 88, 137, 179, 224, 251, 302
CviKI_1 RGCY 7 cut(s) 53, 88, 137, 179, 224, 251, 302
CviQI GTAC 1 cut(s) 17
DpnI GATC 3 cut(s) 42, 213, 282
DpnII GATC 3 cut(s) 40, 211, 280
Eco31I GGTCTC 1 cut(s) 137
EcoRII CCWGG 1 cut(s) 115
Fnu4HI GCNGC 2 cut(s) 62, 309
FokI GGATG 1 cut(s) 26
Fsp4HI GCNGC 2 cut(s) 62, 309
FspBI CTAG 1 cut(s) 89
GluI GCNGC 2 cut(s) 62, 309
HapII CCGG 1 cut(s) 134
Hin1I GRCGYC 1 cut(s) 342
HinfI GANTC 4 cut(s) 30, 106, 120, 294
HpaII CCGG 1 cut(s) 134
HphI GGTGA 2 cut(s) 16, 47
Hpy188I TCNGA 3 cut(s) 29, 83, 211
Hpy188III TCNNGA 1 cut(s) 284
HpyAV CCTTC 1 cut(s) 155
HpyCH4III ACNGT 2 cut(s) 21, 229
HpyCH4IV ACGT 1 cut(s) 342
HpyF10VI GCNNNNNNNGC 2 cut(s) 67, 308
HpySE526I ACGT 1 cut(s) 342
Hsp92I GRCGYC 1 cut(s) 342
KroI GCCGGC 1 cut(s) 133
KroNI GCCGGC 1 cut(s) 135
Kzo9I GATC 3 cut(s) 40, 211, 280
LmnI GCTCC 1 cut(s) 248
LpnPI CCDG 6 cut(s) 102, 129, 147, 180, 203, 297
Lsp1109I GCAGC 2 cut(s) 73, 320
MaeI CTAG 1 cut(s) 89
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 1 cut(s) 4
MalI GATC 3 cut(s) 42, 213, 282
MboI GATC 3 cut(s) 40, 211, 280
MfeI CAATTG 1 cut(s) 65
MflI RGATCY 1 cut(s) 211
MluCI AATT 1 cut(s) 65
MlyI GAGTC 1 cut(s) 114
MmeI TCCRAC 1 cut(s) 7
MroNI GCCGGC 1 cut(s) 133
MspI CCGG 1 cut(s) 134
MspR9I CCNGG 1 cut(s) 117
MunI CAATTG 1 cut(s) 65
MvaI CCWGG 1 cut(s) 117
MwoI GCNNNNNNNGC 2 cut(s) 67, 308
NaeI GCCGGC 1 cut(s) 135
NdeII GATC 3 cut(s) 40, 211, 280
NgoMIV GCCGGC 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 4
PdiI GCCGGC 1 cut(s) 135
PfeI GAWTC 3 cut(s) 30, 106, 294
PfoI TCCNGGA 1 cut(s) 115
PkrI GCNGC 2 cut(s) 63, 310
PleI GAGTC 1 cut(s) 114
PpsI GAGTC 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 115
PspGI CCWGG 1 cut(s) 115
PsuI RGATCY 1 cut(s) 211
RsaI GTAC 1 cut(s) 18
RsaNI GTAC 1 cut(s) 17
SatI GCNGC 2 cut(s) 62, 309
Sau3AI GATC 3 cut(s) 40, 211, 280
SchI GAGTC 1 cut(s) 114
ScrFI CCNGG 1 cut(s) 117
SetI ASST 8 cut(s) 55, 90, 149, 181, 226, 253, 304, 345
SfcI CTRYAG 1 cut(s) 225
Sse9I AATT 1 cut(s) 65
SspMI CTAG 1 cut(s) 89
StyD4I CCNGG 1 cut(s) 115
TaaI ACNGT 2 cut(s) 21, 229
TaiI ACGT 1 cut(s) 345
TasI AATT 1 cut(s) 65
TatI WGTACW 1 cut(s) 16
TfiI GAWTC 3 cut(s) 30, 106, 294
TscAI CASTG 2 cut(s) 116, 318
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 2 cut(s) 61, 308
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 2 cut(s) 188, 303
TspRI CASTG 2 cut(s) 116, 318
XspI CTAG 1 cut(s) 89
ZraI GACGTC 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.