Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0004362

Physical Location & Seq

Genomic Coordinates Forward (+)

3197862 .. 3200709

Gene Structure 2848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG047200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGAGTCGGAGCGGCGAGGACCGGTTCGAGATCGCGTTCTTCGACGTGGAGACGACGGTGCCGACCCGACCCGGTCAGGGCTTCGCCTTATTGGAATTCGGATCCATCCTTGTTTGCCCCAGGAAGTTGATTGAGCTCGAGAGCTACTCCAGTCTAATCCGACCCGCCGACCTCAATTCCATCAACTCCCTGTCCGTCCGCTGTAACGGCATTACCCGAGACGCCGTCATCGCCGCCCCGGGCTTCGATAAGATCGCCGATAGAGTTTTCGATATTCTCCATGGACGTATATGGGCCGGTCATAATATATTGAGGTTTGATTGCCCCCGGATTCGGGAGGCTTTTGCAAATATTGGTCGACCTGCACCAGAACCCAAAGGTACAATTGATTCTTTGGCTTTGTTGACTCAGCGATTTGGAAGGAGAGCTGGAAACATGAAGATGGCCACTCTTGCAACTTATTTTGGTCTTGGACAACAGACACACAGGAGTTTGGATGATGTTCGATTGAATCTTGAAGTACTCAAATATTGTGCTACAGTTTTATTCTTGGAGTCCAGCCTCCCGGACATATTAACAGAGAACAGCTGGGTTTCTCCAAATGCTACAACAAGAAGTCGAAGTGTTGGAAAGTCATCTCCTGAGGGGTCAAGCATGAACATAAATATTTCAAATCAAACAGGGGACAATCATCCAATAACATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTTGCTTGAGACTGTCGAGTCCAGCACAAATCGACCAGATCCTTTTGACATGGGCCCACTTATCAATGAAGTGAAGAATGAGTTATTAGATCAGCAAGACATCAACATGGTGGAAATACCTGCACAAGAGTCTCCCAACAGTTCTCTCAATGCTTCTGTGACCAACAACTGTAATGCCACCATGGATTTTTTACAGCTCGATCAAGTTTTCATTCCTTATATCAGTGCTTCGCTTGTTCCATTGTATCGTGGGAGTCAAAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCATATGAAATTGCGTTTTGGAATCAATACGAAGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTTGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCAAAGAAGTTGTCTTTGGACTCTGGAAGTAGCTCTGAATGGAGGCCTGTTGTGATCCGCAAACAGGGCTTCTACAACTACGCTACTGTGAGATTGCACATACAAACTGCAGTATGCGGAGACATTGCAATCTACGCCACAGAGATATATCAAAGAGACCCCTCTGGCACCGAGCAAAGGCTAGTCTTCTCTAAATTTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATTCGGTTGGTGGCAAAGAAACTGATTATTCATTCCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008408 GO:0009380 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0030312 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:1901360 GO:1902494 GO:1905347 GO:1905348 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNase_T

Protein Analysis

499

Amino Acids

55.59

Weight (kDa)

6.18

Isoelectric Point (pI)

50.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_T	PF00929	13 - 175	2.2e-23	Exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74390 AT1G74390 AT1G74390 AT1G74390 AT5G07710 AT5G61390
fragaria_vesca	FvH4_5g14590 FvH4_5g14590 FvH4_5g14590
malus_domestica	MD06G1197200.v1.1 MD14G1204200.v1.1 MD14G1204300.v1.1 MD14G1204400.v1.1
prunus_persica	Prupe.5G197500_v2.0.a1 Prupe.5G197500_v2.0.a1 Prupe.5G197700_v2.0.a1
pyrus_communis	pycom06g17400 pycom14g16890
rosa_chinensis	RchiOBHm_Chr7g0181951 RchiOBHm_Chr7g0181981
rosa_laevigata	RLG00000005164
rosa_roxburghii	Rroxscaffold_3G00271650
rosa_rugosa	Rorug06G0444900
rosa_samantha	Rh7AG047200 Rh7BG046800 Rh7BG047100 Rh7CG047300 Rh7CG047400 Rh7DG046300 Rh7DG046400
rosa_wichuraiana	Rw0G019670 Rw7G003910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	754
Acc36I	ACCTGC	2 cut(s)	370, 865
AccB1I	GGYRCC	3 cut(s)	58, 1334, 1382
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	1 cut(s)	358
AccII	CGCG	1 cut(s)	35
AciI	CCGC	6 cut(s)	12, 165, 199, 234, 1225, 1284
AclWI	GGATC	6 cut(s)	96, 109, 770, 1216, 1424, 1437
AcoI	YGGCCR	2 cut(s)	444, 1093
AcsI	RAATTY	2 cut(s)	95, 1361
AcuI	CTGAAG	1 cut(s)	1356
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	2 cut(s)	382, 522
AfiI	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1231, 1344
AgeI	ACCGGT	1 cut(s)	21
AgsI	TTSAA	3 cut(s)	511, 518, 672
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	1 cut(s)	119
AjuI	GAANNNNNNNTTGG	2 cut(s)	1166, 1198
AluBI	AGCT	7 cut(s)	136, 144, 428, 588, 934, 1033, 1200
AluI	AGCT	7 cut(s)	136, 144, 428, 588, 934, 1033, 1200
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	8 cut(s)	44, 213, 710, 736, 740, 873, 1281, 1317
AlwI	GGATC	6 cut(s)	96, 109, 770, 1216, 1424, 1437
Ama87I	CYCGRG	4 cut(s)	137, 216, 238, 1395
AoxI	GGCC	6 cut(s)	294, 444, 790, 1093, 1162, 1211
ApaI	GGGCCC	1 cut(s)	794
ApeKI	GCWGC	2 cut(s)	1030, 1038
ApoI	RAATTY	2 cut(s)	95, 1361
ArsI	GACNNNNNNTTYG	2 cut(s)	1163, 1195
AsiGI	ACCGGT	1 cut(s)	21
AspS9I	GGNCC	4 cut(s)	19, 294, 790, 791
AsuC2I	CCSGG	5 cut(s)	72, 239, 240, 328, 566
AsuHPI	GGTGA	1 cut(s)	1384
AvaI	CYCGRG	4 cut(s)	137, 216, 238, 1395
AvaII	GGWCC	1 cut(s)	19
AxyI	CCTNAGG	1 cut(s)	642
BaeGI	GKGCMC	1 cut(s)	794
BalI	TGGCCA	1 cut(s)	446
BamHI	GGATCC	2 cut(s)	101, 1429
BanI	GGYRCC	3 cut(s)	58, 1334, 1382
BanII	GRGCYC	2 cut(s)	138, 794
BbsI	GAAGAC	1 cut(s)	1345
Bbv12I	GWGCWC	1 cut(s)	138
BbvI	GCAGC	2 cut(s)	1025, 1042
BccI	CCATC	4 cut(s)	113, 188, 436, 1154
BceAI	ACGGC	2 cut(s)	209, 223
BcgI	CGANNNNNNTGC	2 cut(s)	1148, 1182
BciT130I	CCWGG	1 cut(s)	121
BclI	TGATCA	1 cut(s)	1084
BcnI	CCSGG	5 cut(s)	72, 239, 240, 328, 566
BcoDI	GTCTC	8 cut(s)	44, 213, 710, 736, 740, 873, 1281, 1317
BfaI	CTAG	1 cut(s)	1349
BfmI	CTRYAG	3 cut(s)	537, 1039, 1275
BfuAI	ACCTGC	2 cut(s)	370, 865
BisI	GCNGC	4 cut(s)	13, 234, 1031, 1039
BlsI	GCNGC	4 cut(s)	14, 235, 1032, 1040
BmcAI	AGTACT	1 cut(s)	522
Bme1390I	CCNGG	6 cut(s)	72, 121, 239, 240, 328, 566
Bme18I	GGWCC	1 cut(s)	19
BmeT110I	CYCGRG	4 cut(s)	137, 216, 238, 1395
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	4 cut(s)	19, 294, 790, 791
BmiI	GGNNCC	6 cut(s)	60, 103, 792, 1336, 1384, 1431
BmrFI	CCNGG	6 cut(s)	72, 121, 239, 240, 328, 566
BmsI	GCATC	3 cut(s)	1111, 1141, 1357
BpiI	GAAGAC	1 cut(s)	1345
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
BpmI	CTGGAG	1 cut(s)	133
BpuEI	CTTGAG	1 cut(s)	764
BpuMI	CCSGG	5 cut(s)	72, 239, 240, 328, 566
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	2 cut(s)	710, 1317
BsaJI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 918, 1396
BsaWI	WCCGGW	1 cut(s)	21
Bsc4I	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1231, 1344
Bse118I	RCCGGY	2 cut(s)	21, 296
Bse1I	ACTGG	1 cut(s)	150
Bse21I	CCTNAGG	1 cut(s)	642
Bse3DI	GCAATG	1 cut(s)	1290
BseBI	CCWGG	1 cut(s)	121
BseDI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 918, 1396
BseGI	GGATG	5 cut(s)	105, 502, 691, 1407, 1417
BseLI	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1231, 1344
BseMI	GCAATG	1 cut(s)	1290
BseMII	CTCAG	3 cut(s)	422, 633, 705
BseNI	ACTGG	1 cut(s)	150
BseSI	GKGCMC	1 cut(s)	794
BseXI	GCAGC	2 cut(s)	1025, 1042
BseYI	CCCAGC	1 cut(s)	588
BsgI	GTGCAG	3 cut(s)	348, 843, 1473
Bsh1236I	CGCG	1 cut(s)	35
BshFI	GGCC	6 cut(s)	296, 446, 792, 1095, 1164, 1213
BshNI	GGYRCC	3 cut(s)	58, 1334, 1382
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	138
BsiHKCI	CYCGRG	4 cut(s)	137, 216, 238, 1395
BsiSI	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
BslFI	GGGAC	1 cut(s)	698
BslI	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1231, 1344
BsmAI	GTCTC	8 cut(s)	44, 213, 710, 736, 740, 873, 1281, 1317
BsmBI	CGTCTC	2 cut(s)	44, 213
BsmFI	GGGAC	1 cut(s)	698
BsmI	GAATGC	1 cut(s)	1458
BsnI	GGCC	6 cut(s)	296, 446, 792, 1095, 1164, 1213
Bso31I	GGTCTC	2 cut(s)	710, 1317
BsoBI	CYCGRG	4 cut(s)	137, 216, 238, 1395
Bsp120I	GGGCCC	1 cut(s)	790
Bsp1286I	GDGCHC	2 cut(s)	138, 794
Bsp143I	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
Bsp19I	CCATGG	2 cut(s)	280, 918
BspACI	CCGC	6 cut(s)	12, 165, 199, 234, 1225, 1284
BspANI	GGCC	6 cut(s)	296, 446, 792, 1095, 1164, 1213
BspCNI	CTCAG	3 cut(s)	421, 634, 706
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	6 cut(s)	60, 103, 792, 1336, 1384, 1431
BspMAI	CTGCAG	2 cut(s)	1043, 1279
BspMI	ACCTGC	2 cut(s)	370, 865
BspPI	GGATC	6 cut(s)	96, 109, 770, 1216, 1424, 1437
BspT107I	GGYRCC	3 cut(s)	58, 1334, 1382
BspTNI	GGTCTC	2 cut(s)	710, 1317
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	1 cut(s)	1290
BsrFI	RCCGGY	2 cut(s)	21, 296
BsrI	ACTGG	1 cut(s)	150
BssAI	RCCGGY	2 cut(s)	21, 296
BssECI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 918, 1396
BssMI	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	2 cut(s)	280, 918
Bst2UI	CCWGG	1 cut(s)	121
Bst4CI	ACNGT	6 cut(s)	58, 541, 751, 878, 908, 1255
BstACI	GRCGYC	1 cut(s)	222
BstC8I	GCNNGC	3 cut(s)	1093, 1156, 1456
BstDEI	CTNAG	4 cut(s)	408, 642, 707, 714
BstDSI	CCRYGG	2 cut(s)	280, 918
BstF5I	GGATG	5 cut(s)	105, 502, 691, 1407, 1417
BstFNI	CGCG	1 cut(s)	35
BstKTI	GATC	9 cut(s)	33, 104, 255, 778, 829, 940, 1087, 1224, 1432
BstMAI	GTCTC	8 cut(s)	44, 213, 710, 736, 740, 873, 1281, 1317
BstMBI	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
BstMWI	GCNNNNNNNGC	5 cut(s)	207, 230, 452, 1233, 1301
BstNI	CCWGG	1 cut(s)	121
BstNSI	RCATGY	1 cut(s)	1158
BstSCI	CCNGG	6 cut(s)	70, 119, 237, 238, 326, 564
BstSFI	CTRYAG	3 cut(s)	537, 1039, 1275
BstSLI	GKGCMC	1 cut(s)	794
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	2 cut(s)	1025, 1042
BstV2I	GAAGAC	1 cut(s)	1345
BstX2I	RGATCY	3 cut(s)	101, 775, 1429
BstYI	RGATCY	3 cut(s)	101, 775, 1429
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	6 cut(s)	296, 446, 792, 1095, 1164, 1213
BtgI	CCRYGG	2 cut(s)	280, 918
BtgZI	GCGATG	2 cut(s)	214, 1173
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	5 cut(s)	105, 502, 691, 1407, 1417
BtsIMutI	CAGTG	1 cut(s)	967
BveI	ACCTGC	2 cut(s)	370, 865
Cac8I	GCNNGC	3 cut(s)	1093, 1156, 1456
Cfr10I	RCCGGY	2 cut(s)	21, 296
Cfr13I	GGNCC	4 cut(s)	19, 294, 790, 791
Cfr9I	CCCGGG	1 cut(s)	238
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	2 cut(s)	381, 521
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	8 cut(s)	281, 436, 655, 787, 844, 919, 1088, 1155
CviQI	GTAC	2 cut(s)	381, 521
DdeI	CTNAG	4 cut(s)	408, 642, 707, 714
DpnI	GATC	9 cut(s)	32, 103, 254, 777, 828, 939, 1086, 1223, 1431
DpnII	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
DrdI	GACNNNNNNGTC	1 cut(s)	754
DseDI	GACNNNNNNGTC	1 cut(s)	754
EaeI	YGGCCR	2 cut(s)	444, 1093
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	2 cut(s)	280, 918
Eco147I	AGGCCT	1 cut(s)	1213
Eco24I	GRGCYC	2 cut(s)	138, 794
Eco31I	GGTCTC	2 cut(s)	710, 1317
Eco47I	GGWCC	1 cut(s)	19
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	1 cut(s)	1356
Eco81I	CCTNAGG	1 cut(s)	642
Eco88I	CYCGRG	4 cut(s)	137, 216, 238, 1395
EcoICRI	GAGCTC	1 cut(s)	136
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	1 cut(s)	119
EcoT14I	CCWWGG	2 cut(s)	280, 918
EcoT22I	ATGCAT	1 cut(s)	1156
EcoT38I	GRGCYC	2 cut(s)	138, 794
ErhI	CCWWGG	2 cut(s)	280, 918
Esp3I	CGTCTC	2 cut(s)	44, 213
FaeI	CATG	8 cut(s)	284, 439, 658, 790, 847, 922, 1091, 1158
FaqI	GGGAC	1 cut(s)	698
FatI	CATG	8 cut(s)	280, 435, 654, 786, 843, 918, 1087, 1154
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	2 cut(s)	1047, 1435
FbaI	TGATCA	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	4 cut(s)	13, 234, 1031, 1039
FokI	GGATG	5 cut(s)	92, 509, 678, 1414, 1424
FriOI	GRGCYC	2 cut(s)	138, 794
Fsp4HI	GCNGC	4 cut(s)	13, 234, 1031, 1039
FspBI	CTAG	1 cut(s)	1349
GluI	GCNGC	4 cut(s)	13, 234, 1031, 1039
GsaI	CCCAGC	1 cut(s)	592
GsuI	CTGGAG	1 cut(s)	133
HaeIII	GGCC	6 cut(s)	296, 446, 792, 1095, 1164, 1213
HapII	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
HgaI	GACGC	1 cut(s)	230
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	8 cut(s)	284, 439, 658, 790, 847, 922, 1091, 1158
HincII	GTYRAC	2 cut(s)	359, 405
HindII	GTYRAC	2 cut(s)	359, 405
HpaII	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
HphI	GGTGA	1 cut(s)	1384
Hpy166II	GTNNAC	3 cut(s)	359, 405, 1392
Hpy188I	TCNGA	5 cut(s)	9, 101, 161, 1204, 1375
Hpy188III	TCNNGA	7 cut(s)	28, 139, 335, 515, 641, 1148, 1191
Hpy8I	GTNNAC	3 cut(s)	359, 405, 1392
Hpy99I	CGWCG	2 cut(s)	47, 58
HpyAV	CCTTC	1 cut(s)	414
HpyCH4III	ACNGT	6 cut(s)	58, 541, 751, 878, 908, 1255
HpyCH4IV	ACGT	2 cut(s)	45, 286
HpyF10VI	GCNNNNNNNGC	5 cut(s)	207, 230, 452, 1233, 1301
HpyF3I	CTNAG	4 cut(s)	408, 642, 707, 714
HpySE526I	ACGT	2 cut(s)	45, 286
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	8 cut(s)	284, 439, 658, 790, 847, 922, 1091, 1158
Ksp22I	TGATCA	1 cut(s)	1084
Kzo9I	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
LmnI	GCTCC	1 cut(s)	9
Lsp1109I	GCAGC	2 cut(s)	1025, 1042
LweI	GCATC	3 cut(s)	1111, 1141, 1357
MaeI	CTAG	1 cut(s)	1349
MaeII	ACGT	2 cut(s)	45, 286
MaeIII	GTNAC	3 cut(s)	203, 895, 1021
MalI	GATC	9 cut(s)	32, 103, 254, 777, 828, 939, 1086, 1223, 1431
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
MboII	GAAGA	5 cut(s)	31, 451, 823, 1345, 1411
MfeI	CAATTG	2 cut(s)	384, 1495
MflI	RGATCY	3 cut(s)	101, 775, 1429
MhlI	GDGCHC	2 cut(s)	138, 794
MlsI	TGGCCA	1 cut(s)	446
MluCI	AATT	8 cut(s)	95, 175, 384, 736, 1052, 1133, 1361, 1495
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	7 cut(s)	13, 400, 563, 764, 875, 1000, 1181
MmeI	TCCRAC	2 cut(s)	184, 607
MnlI	CCTC	9 cut(s)	10, 182, 306, 331, 572, 637, 1203, 1339, 1391
Mox20I	TGGCCA	1 cut(s)	446
Mph1103I	ATGCAT	1 cut(s)	1156
MscI	TGGCCA	1 cut(s)	446
MseI	TTAA	1 cut(s)	575
MslI	CAYNNNNRTG	3 cut(s)	440, 842, 1017
Msp20I	TGGCCA	1 cut(s)	446
MspA1I	CMGCKG	2 cut(s)	201, 588
MspI	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
MspR9I	CCNGG	6 cut(s)	72, 121, 239, 240, 328, 566
MunI	CAATTG	2 cut(s)	384, 1495
Mva1269I	GAATGC	1 cut(s)	1458
MvaI	CCWGG	1 cut(s)	121
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	5 cut(s)	207, 230, 452, 1233, 1301
NciI	CCSGG	5 cut(s)	72, 239, 240, 328, 566
NcoI	CCATGG	2 cut(s)	280, 918
NdeI	CATATG	2 cut(s)	1047, 1435
NdeII	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
NlaIII	CATG	8 cut(s)	284, 439, 658, 790, 847, 922, 1091, 1158
NlaIV	GGNNCC	6 cut(s)	60, 103, 792, 1336, 1384, 1431
NmuCI	GTSAC	2 cut(s)	895, 1021
NsiI	ATGCAT	1 cut(s)	1156
NspI	RCATGY	1 cut(s)	1158
PaeI	GCATGC	1 cut(s)	1158
PaeR7I	CTCGAG	1 cut(s)	137
PceI	AGGCCT	1 cut(s)	1213
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 59
PctI	GAATGC	1 cut(s)	1458
PfeI	GAWTC	4 cut(s)	331, 389, 511, 1065
PflFI	GACNNNGTC	2 cut(s)	72, 224
PfoI	TCCNGGA	1 cut(s)	564
PinAI	ACCGGT	1 cut(s)	21
PkrI	GCNGC	4 cut(s)	14, 235, 1032, 1040
PleI	GAGTC	7 cut(s)	12, 400, 562, 763, 874, 999, 1181
PpsI	GAGTC	7 cut(s)	12, 400, 562, 763, 874, 999, 1181
Psp124BI	GAGCTC	1 cut(s)	138
Psp6I	CCWGG	1 cut(s)	119
PspFI	CCCAGC	1 cut(s)	588
PspGI	CCWGG	1 cut(s)	119
PspN4I	GGNNCC	6 cut(s)	60, 103, 792, 1336, 1384, 1431
PspOMI	GGGCCC	1 cut(s)	790
PspPI	GGNCC	4 cut(s)	19, 294, 790, 791
PstI	CTGCAG	2 cut(s)	1043, 1279
PsuI	RGATCY	3 cut(s)	101, 775, 1429
PsyI	GACNNNGTC	2 cut(s)	72, 224
PvuII	CAGCTG	1 cut(s)	588
RsaI	GTAC	2 cut(s)	382, 522
RsaNI	GTAC	2 cut(s)	381, 521
RseI	CAYNNNNRTG	3 cut(s)	440, 842, 1017
SacI	GAGCTC	1 cut(s)	138
SalI	GTCGAC	1 cut(s)	357
SaqAI	TTAA	1 cut(s)	575
SatI	GCNGC	4 cut(s)	13, 234, 1031, 1039
Sau3AI	GATC	9 cut(s)	30, 101, 252, 775, 826, 937, 1084, 1221, 1429
Sau96I	GGNCC	4 cut(s)	19, 294, 790, 791
ScaI	AGTACT	1 cut(s)	522
SchI	GAGTC	7 cut(s)	13, 400, 563, 764, 875, 1000, 1181
ScrFI	CCNGG	6 cut(s)	72, 121, 239, 240, 328, 566
SduI	GDGCHC	2 cut(s)	138, 794
SfaNI	GCATC	3 cut(s)	1111, 1141, 1357
SfcI	CTRYAG	3 cut(s)	537, 1039, 1275
Sfr274I	CTCGAG	1 cut(s)	137
SinI	GGWCC	1 cut(s)	19
SlaI	CTCGAG	1 cut(s)	137
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	3 cut(s)	440, 842, 1017
SmlI	CTYRAG	2 cut(s)	137, 743
SmoI	CTYRAG	2 cut(s)	137, 743
SphI	GCATGC	1 cut(s)	1158
Sse9I	AATT	8 cut(s)	95, 175, 384, 736, 1052, 1133, 1361, 1495
SseBI	AGGCCT	1 cut(s)	1213
SsiI	CCGC	6 cut(s)	12, 165, 199, 234, 1225, 1284
SspI	AATATT	4 cut(s)	352, 530, 667, 1111
SspMI	CTAG	1 cut(s)	1349
SstI	GAGCTC	1 cut(s)	138
StuI	AGGCCT	1 cut(s)	1213
StyD4I	CCNGG	6 cut(s)	70, 119, 237, 238, 326, 564
StyI	CCWWGG	2 cut(s)	280, 918
TaaI	ACNGT	6 cut(s)	58, 541, 751, 878, 908, 1255
TaiI	ACGT	2 cut(s)	48, 289
TasI	AATT	8 cut(s)	95, 175, 384, 736, 1052, 1133, 1361, 1495
TatI	WGTACW	1 cut(s)	520
TauI	GCSGC	2 cut(s)	15, 236
TfiI	GAWTC	4 cut(s)	331, 389, 511, 1065
Tru1I	TTAA	1 cut(s)	575
Tru9I	TTAA	1 cut(s)	575
TscAI	CASTG	1 cut(s)	967
TseFI	GTSAC	2 cut(s)	895, 1021
TseI	GCWGC	2 cut(s)	1030, 1038
Tsp45I	GTSAC	2 cut(s)	895, 1021
TspDTI	ATGAA	6 cut(s)	452, 671, 819, 937, 1064, 1478
TspGWI	ACGGA	1 cut(s)	184
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	1 cut(s)	967
Tth111I	GACNNNGTC	2 cut(s)	72, 224
VpaK11BI	GGWCC	1 cut(s)	19
XapI	RAATTY	2 cut(s)	95, 1361
XceI	RCATGY	1 cut(s)	1158
XhoI	CTCGAG	1 cut(s)	137
XmaI	CCCGGG	1 cut(s)	238
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	1 cut(s)	1349
ZrmI	AGTACT	1 cut(s)	522
Zsp2I	ATGCAT	1 cut(s)	1156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.