Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0004362

Physical Location & Seq

Genomic Coordinates Forward (+)

3226362 .. 3229222

Gene Structure 2861 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG047400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGAGTCGGAGCGGCGAGGACCGGTTCGAGATCGCGTTCTTCGACGTGGAGACGACGGTGCCGACCCGACCCGGTCAGGGCTTCGCCTTATTGGAATTCGGATCCATCCTTGTTTGCCCCAGGAAGCTGATTGAGCTCGAGAGCTACTCCACTCTAATCCGACCCGCCGACCTCAATTCCATCAACTCCTTGTCCGTCCGCTGTAACGGCATTACTCGAGACGCCGTCATTGCCGCCCCGGGCTTTGATAAGATCGCCGATAGAGTTTTCGATATTCTCCATGGACGTATATGGGCCGGTCATAATATATTGAGGTTTGATTGCCCCCGGATTCGGGAGGCTTTTGCAAATATTGGTCGACCTGCACCAGAACCCAAAGGTACAATTGATTCTTTGGCTTTGTTGACTCAGCGATTTGGAAGGAGAGCTGGAAACATGAAGATGGCCACTCTTGCAACTTATTTTGGTCTTGGACAACAGACACACAGGAGTTTGGATGATGTTCGAATGAATCTTGAAGTACTCAAATATTGTGCTACAGTTTTATTCTTGGAGTCCAGCCTCCCAGACATATTAACAGAGAACAGCTGGGTTTCTCCAAATGCTACAACAAGAAGTCGAAGTGTTGGAAAGTCATCTCCTGAGGGGTCAAGCATGAACATAAATATTTCAAATCAAACAGGGGACAATCATCCAATATCATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTTGCTTGAGACTGTCGAGTCCAGCACAAATCGACCAGATCCTTTTGACATGGTCCCACTTATCAATGAAGTGAAGAATGAGTTAGATCAGCAAGACATCAACATGGTGGAAATACCTGCACAAGAGTCTCCCAACAGTTCTCTCAATGCTTCTGTGACCAACAACTGTAATGCCACCATGGATTTTTTACAGCTCGATCAAGTTTTCATTCCTTATATCAGTGCTTCGCTTGTTCCATTGTATCGTGGGAGTCAAAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCATATGAAATTGCGGTTTGGAATCAATACGAAGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTTGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCAAAGAAGTTGTCTTTGGGCTCTGGAAGTAGCTCTGAATGGAGGCCTGTTGTGATCCGCAAACAGGGCTTCTACAACTACCCTACTGTGAGATTGCACATACAAACTGCAGTATGCGGGGACATTGCAATCTACGCCACAGAGATATATCAAAGAGACCCCTCTGGCACCGAGCAAAGGCTAGTCTTCTCTAAATTTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATTAGGTTGGTGGCAAAGAAACTGATTATTCATTCCATTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008408 GO:0009380 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0030312 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:1901360 GO:1902494 GO:1905347 GO:1905348 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNase_T

Protein Analysis

499

Amino Acids

55.62

Weight (kDa)

6.19

Isoelectric Point (pI)

49.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_T	PF00929	13 - 175	2.2e-24	Exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74390 AT1G74390 AT1G74390 AT1G74390 AT5G07710 AT5G61390
fragaria_vesca	FvH4_5g14590 FvH4_5g14590 FvH4_5g14590
malus_domestica	MD06G1197200.v1.1 MD14G1204200.v1.1 MD14G1204300.v1.1 MD14G1204400.v1.1
prunus_persica	Prupe.5G197500_v2.0.a1 Prupe.5G197500_v2.0.a1 Prupe.5G197700_v2.0.a1
pyrus_communis	pycom06g17400 pycom14g16890
rosa_chinensis	RchiOBHm_Chr7g0181951 RchiOBHm_Chr7g0181981
rosa_laevigata	RLG00000005164
rosa_roxburghii	Rroxscaffold_3G00271650
rosa_rugosa	Rorug06G0444900
rosa_samantha	Rh7AG047200 Rh7BG046800 Rh7BG047100 Rh7CG047300 Rh7CG047400 Rh7DG046300 Rh7DG046400
rosa_wichuraiana	Rw0G019670 Rw7G003910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	754
Acc36I	ACCTGC	2 cut(s)	370, 862
AccB1I	GGYRCC	3 cut(s)	58, 1331, 1379
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	1 cut(s)	358
AccII	CGCG	1 cut(s)	35
AciI	CCGC	7 cut(s)	12, 165, 199, 234, 1054, 1222, 1281
AclWI	GGATC	6 cut(s)	96, 109, 770, 1213, 1421, 1434
AcoI	YGGCCR	2 cut(s)	444, 1090
AcsI	RAATTY	2 cut(s)	95, 1358
AcuI	CTGAAG	1 cut(s)	1353
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	2 cut(s)	382, 522
AfiI	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1228, 1341
AgeI	ACCGGT	1 cut(s)	21
AgsI	TTSAA	2 cut(s)	518, 672
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	1 cut(s)	119
AjuI	GAANNNNNNNTTGG	2 cut(s)	1163, 1195
AluBI	AGCT	8 cut(s)	127, 136, 144, 428, 588, 931, 1030, 1197
AluI	AGCT	8 cut(s)	127, 136, 144, 428, 588, 931, 1030, 1197
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	7 cut(s)	44, 213, 710, 736, 740, 870, 1314
AlwI	GGATC	6 cut(s)	96, 109, 770, 1213, 1421, 1434
Ama87I	CYCGRG	4 cut(s)	137, 216, 238, 1392
AoxI	GGCC	5 cut(s)	294, 444, 1090, 1159, 1208
ApeKI	GCWGC	2 cut(s)	1027, 1035
ApoI	RAATTY	2 cut(s)	95, 1358
ArsI	GACNNNNNNTTYG	2 cut(s)	1160, 1192
AsiGI	ACCGGT	1 cut(s)	21
AspS9I	GGNCC	3 cut(s)	19, 294, 790
AsuC2I	CCSGG	4 cut(s)	72, 239, 240, 328
AsuHPI	GGTGA	1 cut(s)	1381
AsuII	TTCGAA	1 cut(s)	505
AvaI	CYCGRG	4 cut(s)	137, 216, 238, 1392
AvaII	GGWCC	2 cut(s)	19, 790
AxyI	CCTNAGG	1 cut(s)	642
BalI	TGGCCA	1 cut(s)	446
BamHI	GGATCC	2 cut(s)	101, 1426
BanI	GGYRCC	3 cut(s)	58, 1331, 1379
BanII	GRGCYC	2 cut(s)	138, 1187
BbsI	GAAGAC	1 cut(s)	1342
Bbv12I	GWGCWC	1 cut(s)	138
BbvI	GCAGC	2 cut(s)	1022, 1039
BccI	CCATC	4 cut(s)	113, 188, 436, 1151
BceAI	ACGGC	2 cut(s)	209, 223
BcgI	CGANNNNNNTGC	2 cut(s)	1145, 1179
BciT130I	CCWGG	1 cut(s)	121
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	4 cut(s)	72, 239, 240, 328
BcoDI	GTCTC	7 cut(s)	44, 213, 710, 736, 740, 870, 1314
BfaI	CTAG	1 cut(s)	1346
BfmI	CTRYAG	3 cut(s)	537, 1036, 1272
BfuAI	ACCTGC	2 cut(s)	370, 862
BisI	GCNGC	4 cut(s)	13, 234, 1028, 1036
BlsI	GCNGC	4 cut(s)	14, 235, 1029, 1037
BmcAI	AGTACT	1 cut(s)	522
Bme1390I	CCNGG	5 cut(s)	72, 121, 239, 240, 328
Bme18I	GGWCC	2 cut(s)	19, 790
BmeT110I	CYCGRG	4 cut(s)	137, 216, 238, 1392
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	3 cut(s)	19, 294, 790
BmiI	GGNNCC	6 cut(s)	60, 103, 792, 1333, 1381, 1428
BmrFI	CCNGG	5 cut(s)	72, 121, 239, 240, 328
BmsI	GCATC	3 cut(s)	1108, 1138, 1354
BpiI	GAAGAC	1 cut(s)	1342
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
Bpu14I	TTCGAA	1 cut(s)	505
BpuEI	CTTGAG	1 cut(s)	764
BpuMI	CCSGG	4 cut(s)	72, 239, 240, 328
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	2 cut(s)	710, 1314
BsaJI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 915, 1393
BsaWI	WCCGGW	1 cut(s)	21
Bsc4I	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1228, 1341
Bse118I	RCCGGY	2 cut(s)	21, 296
Bse21I	CCTNAGG	1 cut(s)	642
Bse3DI	GCAATG	2 cut(s)	228, 1287
BseBI	CCWGG	1 cut(s)	121
BseDI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 915, 1393
BseGI	GGATG	5 cut(s)	105, 502, 691, 1404, 1414
BseLI	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1228, 1341
BseMI	GCAATG	2 cut(s)	228, 1287
BseMII	CTCAG	3 cut(s)	422, 633, 705
BseXI	GCAGC	2 cut(s)	1022, 1039
BseYI	CCCAGC	1 cut(s)	588
BsgI	GTGCAG	3 cut(s)	348, 840, 1470
Bsh1236I	CGCG	1 cut(s)	35
BshFI	GGCC	5 cut(s)	296, 446, 1092, 1161, 1210
BshNI	GGYRCC	3 cut(s)	58, 1331, 1379
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	138
BsiHKCI	CYCGRG	4 cut(s)	137, 216, 238, 1392
BsiSI	CCGG	5 cut(s)	22, 72, 239, 297, 328
BslFI	GGGAC	3 cut(s)	698, 776, 1298
BslI	CCNNNNNNNGG	5 cut(s)	77, 333, 334, 1228, 1341
BsmAI	GTCTC	7 cut(s)	44, 213, 710, 736, 740, 870, 1314
BsmBI	CGTCTC	2 cut(s)	44, 213
BsmFI	GGGAC	3 cut(s)	698, 776, 1298
BsnI	GGCC	5 cut(s)	296, 446, 1092, 1161, 1210
Bso31I	GGTCTC	2 cut(s)	710, 1314
BsoBI	CYCGRG	4 cut(s)	137, 216, 238, 1392
Bsp119I	TTCGAA	1 cut(s)	505
Bsp1286I	GDGCHC	2 cut(s)	138, 1187
Bsp143I	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
Bsp19I	CCATGG	2 cut(s)	280, 915
BspACI	CCGC	7 cut(s)	12, 165, 199, 234, 1054, 1222, 1281
BspANI	GGCC	5 cut(s)	296, 446, 1092, 1161, 1210
BspCNI	CTCAG	3 cut(s)	421, 634, 706
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	6 cut(s)	60, 103, 792, 1333, 1381, 1428
BspMAI	CTGCAG	2 cut(s)	1040, 1276
BspMI	ACCTGC	2 cut(s)	370, 862
BspPI	GGATC	6 cut(s)	96, 109, 770, 1213, 1421, 1434
BspT104I	TTCGAA	1 cut(s)	505
BspT107I	GGYRCC	3 cut(s)	58, 1331, 1379
BspTNI	GGTCTC	2 cut(s)	710, 1314
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	2 cut(s)	228, 1287
BsrFI	RCCGGY	2 cut(s)	21, 296
BssAI	RCCGGY	2 cut(s)	21, 296
BssECI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 915, 1393
BssMI	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	2 cut(s)	280, 915
Bst2UI	CCWGG	1 cut(s)	121
Bst4CI	ACNGT	6 cut(s)	58, 541, 751, 875, 905, 1252
BstACI	GRCGYC	1 cut(s)	222
BstBI	TTCGAA	1 cut(s)	505
BstC8I	GCNNGC	3 cut(s)	1090, 1153, 1453
BstDEI	CTNAG	4 cut(s)	408, 642, 707, 714
BstDSI	CCRYGG	2 cut(s)	280, 915
BstF5I	GGATG	5 cut(s)	105, 502, 691, 1404, 1414
BstFNI	CGCG	1 cut(s)	35
BstKTI	GATC	9 cut(s)	33, 104, 255, 778, 826, 937, 1084, 1221, 1429
BstMAI	GTCTC	7 cut(s)	44, 213, 710, 736, 740, 870, 1314
BstMBI	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
BstMWI	GCNNNNNNNGC	6 cut(s)	133, 207, 230, 452, 1230, 1298
BstNI	CCWGG	1 cut(s)	121
BstNSI	RCATGY	1 cut(s)	1155
BstSCI	CCNGG	5 cut(s)	70, 119, 237, 238, 326
BstSFI	CTRYAG	3 cut(s)	537, 1036, 1272
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	2 cut(s)	1022, 1039
BstV2I	GAAGAC	1 cut(s)	1342
BstX2I	RGATCY	3 cut(s)	101, 775, 1426
BstYI	RGATCY	3 cut(s)	101, 775, 1426
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	5 cut(s)	296, 446, 1092, 1161, 1210
BtgI	CCRYGG	2 cut(s)	280, 915
BtgZI	GCGATG	1 cut(s)	1170
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	5 cut(s)	105, 502, 691, 1404, 1414
BtsIMutI	CAGTG	1 cut(s)	964
BveI	ACCTGC	2 cut(s)	370, 862
Cac8I	GCNNGC	3 cut(s)	1090, 1153, 1453
Cfr10I	RCCGGY	2 cut(s)	21, 296
Cfr13I	GGNCC	3 cut(s)	19, 294, 790
Cfr9I	CCCGGG	1 cut(s)	238
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	2 cut(s)	381, 521
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	8 cut(s)	281, 436, 655, 787, 841, 916, 1085, 1152
CviQI	GTAC	2 cut(s)	381, 521
DdeI	CTNAG	4 cut(s)	408, 642, 707, 714
DpnI	GATC	9 cut(s)	32, 103, 254, 777, 825, 936, 1083, 1220, 1428
DpnII	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
DrdI	GACNNNNNNGTC	1 cut(s)	754
DseDI	GACNNNNNNGTC	1 cut(s)	754
EaeI	YGGCCR	2 cut(s)	444, 1090
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	2 cut(s)	280, 915
Eco147I	AGGCCT	1 cut(s)	1210
Eco24I	GRGCYC	2 cut(s)	138, 1187
Eco31I	GGTCTC	2 cut(s)	710, 1314
Eco47I	GGWCC	2 cut(s)	19, 790
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	1 cut(s)	1353
Eco81I	CCTNAGG	1 cut(s)	642
Eco88I	CYCGRG	4 cut(s)	137, 216, 238, 1392
EcoICRI	GAGCTC	1 cut(s)	136
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	1 cut(s)	119
EcoT14I	CCWWGG	2 cut(s)	280, 915
EcoT22I	ATGCAT	1 cut(s)	1153
EcoT38I	GRGCYC	2 cut(s)	138, 1187
ErhI	CCWWGG	2 cut(s)	280, 915
Esp3I	CGTCTC	2 cut(s)	44, 213
FaeI	CATG	8 cut(s)	284, 439, 658, 790, 844, 919, 1088, 1155
FaqI	GGGAC	3 cut(s)	698, 776, 1298
FatI	CATG	8 cut(s)	280, 435, 654, 786, 840, 915, 1084, 1151
FauI	CCCGC	2 cut(s)	172, 1274
FauNDI	CATATG	2 cut(s)	1044, 1432
FbaI	TGATCA	1 cut(s)	1081
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	4 cut(s)	13, 234, 1028, 1036
FokI	GGATG	5 cut(s)	92, 509, 678, 1411, 1421
FriOI	GRGCYC	2 cut(s)	138, 1187
Fsp4HI	GCNGC	4 cut(s)	13, 234, 1028, 1036
FspBI	CTAG	1 cut(s)	1346
GluI	GCNGC	4 cut(s)	13, 234, 1028, 1036
GsaI	CCCAGC	1 cut(s)	592
HaeIII	GGCC	5 cut(s)	296, 446, 1092, 1161, 1210
HapII	CCGG	5 cut(s)	22, 72, 239, 297, 328
HgaI	GACGC	1 cut(s)	230
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	8 cut(s)	284, 439, 658, 790, 844, 919, 1088, 1155
HincII	GTYRAC	2 cut(s)	359, 405
HindII	GTYRAC	2 cut(s)	359, 405
HpaII	CCGG	5 cut(s)	22, 72, 239, 297, 328
HphI	GGTGA	1 cut(s)	1381
Hpy166II	GTNNAC	3 cut(s)	359, 405, 1389
Hpy188I	TCNGA	5 cut(s)	9, 101, 161, 1201, 1372
Hpy188III	TCNNGA	8 cut(s)	28, 139, 218, 335, 515, 641, 1145, 1188
Hpy8I	GTNNAC	3 cut(s)	359, 405, 1389
Hpy99I	CGWCG	2 cut(s)	47, 58
HpyAV	CCTTC	1 cut(s)	414
HpyCH4III	ACNGT	6 cut(s)	58, 541, 751, 875, 905, 1252
HpyCH4IV	ACGT	2 cut(s)	45, 286
HpyF10VI	GCNNNNNNNGC	6 cut(s)	133, 207, 230, 452, 1230, 1298
HpyF3I	CTNAG	4 cut(s)	408, 642, 707, 714
HpySE526I	ACGT	2 cut(s)	45, 286
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	8 cut(s)	284, 439, 658, 790, 844, 919, 1088, 1155
Ksp22I	TGATCA	1 cut(s)	1081
Kzo9I	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
LmnI	GCTCC	1 cut(s)	9
Lsp1109I	GCAGC	2 cut(s)	1022, 1039
LweI	GCATC	3 cut(s)	1108, 1138, 1354
MaeI	CTAG	1 cut(s)	1346
MaeII	ACGT	2 cut(s)	45, 286
MaeIII	GTNAC	3 cut(s)	203, 892, 1018
MalI	GATC	9 cut(s)	32, 103, 254, 777, 825, 936, 1083, 1220, 1428
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
MboII	GAAGA	5 cut(s)	31, 451, 823, 1342, 1408
MfeI	CAATTG	1 cut(s)	384
MflI	RGATCY	3 cut(s)	101, 775, 1426
MhlI	GDGCHC	2 cut(s)	138, 1187
MlsI	TGGCCA	1 cut(s)	446
MluCI	AATT	7 cut(s)	95, 175, 384, 736, 1049, 1130, 1358
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	6 cut(s)	13, 400, 563, 764, 872, 997
MmeI	TCCRAC	2 cut(s)	184, 607
MnlI	CCTC	9 cut(s)	10, 182, 306, 331, 572, 637, 1200, 1336, 1388
Mox20I	TGGCCA	1 cut(s)	446
Mph1103I	ATGCAT	1 cut(s)	1153
MscI	TGGCCA	1 cut(s)	446
MseI	TTAA	1 cut(s)	575
MslI	CAYNNNNRTG	3 cut(s)	440, 839, 1014
Msp20I	TGGCCA	1 cut(s)	446
MspA1I	CMGCKG	2 cut(s)	201, 588
MspI	CCGG	5 cut(s)	22, 72, 239, 297, 328
MspR9I	CCNGG	5 cut(s)	72, 121, 239, 240, 328
MunI	CAATTG	1 cut(s)	384
MvaI	CCWGG	1 cut(s)	121
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	6 cut(s)	133, 207, 230, 452, 1230, 1298
NciI	CCSGG	4 cut(s)	72, 239, 240, 328
NcoI	CCATGG	2 cut(s)	280, 915
NdeI	CATATG	2 cut(s)	1044, 1432
NdeII	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
NlaIII	CATG	8 cut(s)	284, 439, 658, 790, 844, 919, 1088, 1155
NlaIV	GGNNCC	6 cut(s)	60, 103, 792, 1333, 1381, 1428
NmuCI	GTSAC	2 cut(s)	892, 1018
NsiI	ATGCAT	1 cut(s)	1153
NspI	RCATGY	1 cut(s)	1155
NspV	TTCGAA	1 cut(s)	505
PaeI	GCATGC	1 cut(s)	1155
PaeR7I	CTCGAG	2 cut(s)	137, 216
PceI	AGGCCT	1 cut(s)	1210
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 59
PfeI	GAWTC	4 cut(s)	331, 389, 511, 1062
PflFI	GACNNNGTC	3 cut(s)	72, 224, 788
PinAI	ACCGGT	1 cut(s)	21
PkrI	GCNGC	4 cut(s)	14, 235, 1029, 1037
PleI	GAGTC	6 cut(s)	12, 400, 562, 763, 871, 996
PpsI	GAGTC	6 cut(s)	12, 400, 562, 763, 871, 996
Psp124BI	GAGCTC	1 cut(s)	138
Psp6I	CCWGG	1 cut(s)	119
PspFI	CCCAGC	1 cut(s)	588
PspGI	CCWGG	1 cut(s)	119
PspN4I	GGNNCC	6 cut(s)	60, 103, 792, 1333, 1381, 1428
PspPI	GGNCC	3 cut(s)	19, 294, 790
PstI	CTGCAG	2 cut(s)	1040, 1276
PsuI	RGATCY	3 cut(s)	101, 775, 1426
PsyI	GACNNNGTC	3 cut(s)	72, 224, 788
PvuII	CAGCTG	1 cut(s)	588
RsaI	GTAC	2 cut(s)	382, 522
RsaNI	GTAC	2 cut(s)	381, 521
RseI	CAYNNNNRTG	3 cut(s)	440, 839, 1014
SacI	GAGCTC	1 cut(s)	138
SalI	GTCGAC	1 cut(s)	357
SaqAI	TTAA	1 cut(s)	575
SatI	GCNGC	4 cut(s)	13, 234, 1028, 1036
Sau3AI	GATC	9 cut(s)	30, 101, 252, 775, 823, 934, 1081, 1218, 1426
Sau96I	GGNCC	3 cut(s)	19, 294, 790
ScaI	AGTACT	1 cut(s)	522
SchI	GAGTC	6 cut(s)	13, 400, 563, 764, 872, 997
ScrFI	CCNGG	5 cut(s)	72, 121, 239, 240, 328
SduI	GDGCHC	2 cut(s)	138, 1187
SfaNI	GCATC	3 cut(s)	1108, 1138, 1354
SfcI	CTRYAG	3 cut(s)	537, 1036, 1272
Sfr274I	CTCGAG	2 cut(s)	137, 216
SfuI	TTCGAA	1 cut(s)	505
SinI	GGWCC	2 cut(s)	19, 790
SlaI	CTCGAG	2 cut(s)	137, 216
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	3 cut(s)	440, 839, 1014
SmlI	CTYRAG	3 cut(s)	137, 216, 743
SmoI	CTYRAG	3 cut(s)	137, 216, 743
SphI	GCATGC	1 cut(s)	1155
Sse9I	AATT	7 cut(s)	95, 175, 384, 736, 1049, 1130, 1358
SseBI	AGGCCT	1 cut(s)	1210
SsiI	CCGC	7 cut(s)	12, 165, 199, 234, 1054, 1222, 1281
SspI	AATATT	4 cut(s)	352, 530, 667, 1108
SspMI	CTAG	1 cut(s)	1346
SstI	GAGCTC	1 cut(s)	138
StuI	AGGCCT	1 cut(s)	1210
StyD4I	CCNGG	5 cut(s)	70, 119, 237, 238, 326
StyI	CCWWGG	2 cut(s)	280, 915
TaaI	ACNGT	6 cut(s)	58, 541, 751, 875, 905, 1252
TaiI	ACGT	2 cut(s)	48, 289
TasI	AATT	7 cut(s)	95, 175, 384, 736, 1049, 1130, 1358
TatI	WGTACW	1 cut(s)	520
TauI	GCSGC	2 cut(s)	15, 236
TfiI	GAWTC	4 cut(s)	331, 389, 511, 1062
Tru1I	TTAA	1 cut(s)	575
Tru9I	TTAA	1 cut(s)	575
TscAI	CASTG	1 cut(s)	964
TseFI	GTSAC	2 cut(s)	892, 1018
TseI	GCWGC	2 cut(s)	1027, 1035
Tsp45I	GTSAC	2 cut(s)	892, 1018
TspDTI	ATGAA	7 cut(s)	452, 524, 671, 819, 934, 1061, 1475
TspGWI	ACGGA	1 cut(s)	184
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	1 cut(s)	964
Tth111I	GACNNNGTC	3 cut(s)	72, 224, 788
VpaK11BI	GGWCC	2 cut(s)	19, 790
XapI	RAATTY	2 cut(s)	95, 1358
XceI	RCATGY	1 cut(s)	1155
XhoI	CTCGAG	2 cut(s)	137, 216
XmaI	CCCGGG	1 cut(s)	238
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	1 cut(s)	1346
ZrmI	AGTACT	1 cut(s)	522
Zsp2I	ATGCAT	1 cut(s)	1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.