Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004362

Physical Location & Seq

Genomic Coordinates Forward (+)

3184949 .. 3187754

Gene Structure 2806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G003910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGAGTCGGAGCGGCGAGGACCGGTTCGAGATCGCGTTCTTCGACGTGGAGACGACGGTGCCGACCCGACCCGGTCAGGGCTTCGCCTTATTGGAATTCGGATCCATCCTTGTTTGCCCCAGGAAGCTGATTGAGCTCGAGAGCTACTCCAGTCTAATCCGACCCGCCGACCTCAATTCCATCAACTCCCTGTCCGTCCGCTGTAACGGCATTACCCGAGACGCCGTCATCGCCGCCCCGGGCTTCGATAAGATCGCCGATAGAGTTTTCGATATTCTCCATGGACGTATATGGGCCGGTCATAATATATTGAGGTTTGATTGCCCCCGGATTCGGGAGGCTTTTGCAAATATTGGTCGACCTGCACCAGAACCCAAAGGTACAATTGATTCTTTGGCTTTGTTGACTCAGCGATTTGGAAGGAGAGCTGGAAACATGAAGATGGCCACTCTTGCAACTTATTTTGGTCTTGGACAACAGACACACAGGAGTTTGGATGATGTTCGATTGAATCTTGAAGTACTCAAATATTGTGCTACAGTTTTATTCTTGAACAGCTGGGTTTCCCCAAATGCTACAACAAGAAGTCGAAGTGGTGGAAAGTTATCTCAAACAGGGGAAAATCATCCAATAACATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTTGCTTGAGACTGTCGAGTCCAGCACAAATCGACCAGATCCTTTTGACATGGGCCCACTTATCAATGAAGTGAAGAATGAGTTATTAGATCAGCAAGACATCAACATGGTGGAAATACCTGCACAAGAGTCTCCCAACAGTTCTCTCAATGCTTCTGTGACCAACAACTGTAATGCCACCATGGATTTTTTACAGCTCGATCAAGTTTTCATTCCTTATATCAGTGCTTCGCTTGTTCCATTGTATCGTGGGAGTCAGAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCATATGAAATTGCGTTTTGGAATCAATACGAAGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTTGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCAAAGAAGTTGTCTTTGGACTCTGGAAGTAGCTCTGAATGGAGGCCTGTTGTGATCCGCAAACAGGGCTTCTACAACTACGCTACTGTGAGATTGCACATACAAACTGCAGTATGCGGAGACATTGCAATCTACGCCACAGAGATATATCAAAGAGACCCCTCTGGCACTGAGCAAAGGCTAGTCTTCTCTAAATTTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATTAGGTTGGTGGCAAAGAAACTGATTATTCATTCCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008408 GO:0009380 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0030312 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:1901360 GO:1902494 GO:1905347 GO:1905348 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNase_T

Protein Analysis

477

Amino Acids

53.26

Weight (kDa)

7.1

Isoelectric Point (pI)

46.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_T	PF00929	13 - 175	2e-23	Exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74390 AT1G74390 AT1G74390 AT1G74390 AT5G07710 AT5G61390
fragaria_vesca	FvH4_5g14590 FvH4_5g14590 FvH4_5g14590
malus_domestica	MD06G1197200.v1.1 MD14G1204200.v1.1 MD14G1204300.v1.1 MD14G1204400.v1.1
prunus_persica	Prupe.5G197500_v2.0.a1 Prupe.5G197500_v2.0.a1 Prupe.5G197700_v2.0.a1
pyrus_communis	pycom06g17400 pycom14g16890
rosa_chinensis	RchiOBHm_Chr7g0181951 RchiOBHm_Chr7g0181981
rosa_laevigata	RLG00000005164
rosa_roxburghii	Rroxscaffold_3G00271650
rosa_rugosa	Rorug06G0444900
rosa_samantha	Rh7AG047200 Rh7BG046800 Rh7BG047100 Rh7CG047300 Rh7CG047400 Rh7DG046300 Rh7DG046400
rosa_wichuraiana	Rw0G019670 Rw7G003910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	688
Acc36I	ACCTGC	2 cut(s)	370, 799
AccB1I	GGYRCC	2 cut(s)	58, 1316
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	1 cut(s)	358
AccII	CGCG	1 cut(s)	35
AciI	CCGC	6 cut(s)	12, 165, 199, 234, 1159, 1218
AclWI	GGATC	6 cut(s)	96, 109, 704, 1150, 1358, 1371
AcoI	YGGCCR	2 cut(s)	444, 1027
AcsI	RAATTY	2 cut(s)	95, 1295
AcuI	CTGAAG	1 cut(s)	1290
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	2 cut(s)	382, 522
AfiI	CCNNNNNNNGG	4 cut(s)	77, 333, 334, 1165
AgeI	ACCGGT	1 cut(s)	21
AgsI	TTSAA	3 cut(s)	511, 518, 553
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	1 cut(s)	119
AjuI	GAANNNNNNNTTGG	2 cut(s)	1100, 1132
AluBI	AGCT	8 cut(s)	127, 136, 144, 428, 558, 868, 967, 1134
AluI	AGCT	8 cut(s)	127, 136, 144, 428, 558, 868, 967, 1134
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	8 cut(s)	44, 213, 644, 670, 674, 807, 1215, 1251
AlwI	GGATC	6 cut(s)	96, 109, 704, 1150, 1358, 1371
Ama87I	CYCGRG	4 cut(s)	137, 216, 238, 1329
AoxI	GGCC	6 cut(s)	294, 444, 724, 1027, 1096, 1145
ApaI	GGGCCC	1 cut(s)	728
ApeKI	GCWGC	2 cut(s)	964, 972
ApoI	RAATTY	2 cut(s)	95, 1295
ArsI	GACNNNNNNTTYG	2 cut(s)	1097, 1129
AsiGI	ACCGGT	1 cut(s)	21
AspS9I	GGNCC	4 cut(s)	19, 294, 724, 725
AsuC2I	CCSGG	4 cut(s)	72, 239, 240, 328
AsuHPI	GGTGA	1 cut(s)	1318
AvaI	CYCGRG	4 cut(s)	137, 216, 238, 1329
AvaII	GGWCC	1 cut(s)	19
BaeGI	GKGCMC	1 cut(s)	728
BalI	TGGCCA	1 cut(s)	446
BamHI	GGATCC	2 cut(s)	101, 1363
BanI	GGYRCC	2 cut(s)	58, 1316
BanII	GRGCYC	2 cut(s)	138, 728
BbsI	GAAGAC	1 cut(s)	1279
Bbv12I	GWGCWC	1 cut(s)	138
BbvI	GCAGC	2 cut(s)	959, 976
BccI	CCATC	4 cut(s)	113, 188, 436, 1088
BceAI	ACGGC	2 cut(s)	209, 223
BcgI	CGANNNNNNTGC	2 cut(s)	1082, 1116
BciT130I	CCWGG	1 cut(s)	121
BclI	TGATCA	1 cut(s)	1018
BcnI	CCSGG	4 cut(s)	72, 239, 240, 328
BcoDI	GTCTC	8 cut(s)	44, 213, 644, 670, 674, 807, 1215, 1251
BfaI	CTAG	1 cut(s)	1283
BfmI	CTRYAG	3 cut(s)	537, 973, 1209
BfuAI	ACCTGC	2 cut(s)	370, 799
BisI	GCNGC	4 cut(s)	13, 234, 965, 973
BlsI	GCNGC	4 cut(s)	14, 235, 966, 974
BmcAI	AGTACT	1 cut(s)	522
Bme1390I	CCNGG	5 cut(s)	72, 121, 239, 240, 328
Bme18I	GGWCC	1 cut(s)	19
BmeT110I	CYCGRG	4 cut(s)	137, 216, 238, 1329
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	4 cut(s)	19, 294, 724, 725
BmiI	GGNNCC	5 cut(s)	60, 103, 726, 1318, 1365
BmrFI	CCNGG	5 cut(s)	72, 121, 239, 240, 328
BmsI	GCATC	3 cut(s)	1045, 1075, 1291
BpiI	GAAGAC	1 cut(s)	1279
BplI	GAGNNNNNCTC	2 cut(s)	131, 163
BpmI	CTGGAG	1 cut(s)	133
BpuEI	CTTGAG	1 cut(s)	698
BpuMI	CCSGG	4 cut(s)	72, 239, 240, 328
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	2 cut(s)	644, 1251
BsaJI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 852, 1330
BsaWI	WCCGGW	1 cut(s)	21
Bsc4I	CCNNNNNNNGG	4 cut(s)	77, 333, 334, 1165
Bse118I	RCCGGY	2 cut(s)	21, 296
Bse1I	ACTGG	1 cut(s)	150
Bse3DI	GCAATG	1 cut(s)	1224
BseBI	CCWGG	1 cut(s)	121
BseDI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 852, 1330
BseGI	GGATG	5 cut(s)	105, 502, 625, 1341, 1351
BseLI	CCNNNNNNNGG	4 cut(s)	77, 333, 334, 1165
BseMI	GCAATG	1 cut(s)	1224
BseMII	CTCAG	3 cut(s)	422, 639, 1263
BseNI	ACTGG	1 cut(s)	150
BseSI	GKGCMC	1 cut(s)	728
BseXI	GCAGC	2 cut(s)	959, 976
BseYI	CCCAGC	1 cut(s)	558
BsgI	GTGCAG	3 cut(s)	348, 777, 1407
Bsh1236I	CGCG	1 cut(s)	35
BshFI	GGCC	6 cut(s)	296, 446, 726, 1029, 1098, 1147
BshNI	GGYRCC	2 cut(s)	58, 1316
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	138
BsiHKCI	CYCGRG	4 cut(s)	137, 216, 238, 1329
BsiSI	CCGG	5 cut(s)	22, 72, 239, 297, 328
BslI	CCNNNNNNNGG	4 cut(s)	77, 333, 334, 1165
BsmAI	GTCTC	8 cut(s)	44, 213, 644, 670, 674, 807, 1215, 1251
BsmBI	CGTCTC	2 cut(s)	44, 213
BsnI	GGCC	6 cut(s)	296, 446, 726, 1029, 1098, 1147
Bso31I	GGTCTC	2 cut(s)	644, 1251
BsoBI	CYCGRG	4 cut(s)	137, 216, 238, 1329
Bsp120I	GGGCCC	1 cut(s)	724
Bsp1286I	GDGCHC	2 cut(s)	138, 728
Bsp143I	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
Bsp19I	CCATGG	2 cut(s)	280, 852
BspACI	CCGC	6 cut(s)	12, 165, 199, 234, 1159, 1218
BspANI	GGCC	6 cut(s)	296, 446, 726, 1029, 1098, 1147
BspCNI	CTCAG	3 cut(s)	421, 640, 1264
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	5 cut(s)	60, 103, 726, 1318, 1365
BspMAI	CTGCAG	2 cut(s)	977, 1213
BspMI	ACCTGC	2 cut(s)	370, 799
BspPI	GGATC	6 cut(s)	96, 109, 704, 1150, 1358, 1371
BspT107I	GGYRCC	2 cut(s)	58, 1316
BspTNI	GGTCTC	2 cut(s)	644, 1251
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	1 cut(s)	1224
BsrFI	RCCGGY	2 cut(s)	21, 296
BsrI	ACTGG	1 cut(s)	150
BssAI	RCCGGY	2 cut(s)	21, 296
BssECI	CCNNGG	7 cut(s)	119, 237, 238, 280, 326, 852, 1330
BssMI	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	2 cut(s)	280, 852
Bst2UI	CCWGG	1 cut(s)	121
Bst4CI	ACNGT	6 cut(s)	58, 541, 685, 812, 842, 1189
BstACI	GRCGYC	1 cut(s)	222
BstC8I	GCNNGC	3 cut(s)	1027, 1090, 1390
BstDEI	CTNAG	4 cut(s)	408, 641, 648, 1272
BstDSI	CCRYGG	2 cut(s)	280, 852
BstF5I	GGATG	5 cut(s)	105, 502, 625, 1341, 1351
BstFNI	CGCG	1 cut(s)	35
BstKTI	GATC	9 cut(s)	33, 104, 255, 712, 763, 874, 1021, 1158, 1366
BstMAI	GTCTC	8 cut(s)	44, 213, 644, 670, 674, 807, 1215, 1251
BstMBI	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
BstMWI	GCNNNNNNNGC	6 cut(s)	133, 207, 230, 452, 1167, 1235
BstNI	CCWGG	1 cut(s)	121
BstNSI	RCATGY	1 cut(s)	1092
BstSCI	CCNGG	5 cut(s)	70, 119, 237, 238, 326
BstSFI	CTRYAG	3 cut(s)	537, 973, 1209
BstSLI	GKGCMC	1 cut(s)	728
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	2 cut(s)	959, 976
BstV2I	GAAGAC	1 cut(s)	1279
BstX2I	RGATCY	3 cut(s)	101, 709, 1363
BstYI	RGATCY	3 cut(s)	101, 709, 1363
BsuRI	GGCC	6 cut(s)	296, 446, 726, 1029, 1098, 1147
BtgI	CCRYGG	2 cut(s)	280, 852
BtgZI	GCGATG	2 cut(s)	214, 1107
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	5 cut(s)	105, 502, 625, 1341, 1351
BtsIMutI	CAGTG	2 cut(s)	901, 1269
BveI	ACCTGC	2 cut(s)	370, 799
Cac8I	GCNNGC	3 cut(s)	1027, 1090, 1390
Cfr10I	RCCGGY	2 cut(s)	21, 296
Cfr13I	GGNCC	4 cut(s)	19, 294, 724, 725
Cfr9I	CCCGGG	1 cut(s)	238
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	2 cut(s)	381, 521
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	7 cut(s)	281, 436, 721, 778, 853, 1022, 1089
CviQI	GTAC	2 cut(s)	381, 521
DdeI	CTNAG	4 cut(s)	408, 641, 648, 1272
DpnI	GATC	9 cut(s)	32, 103, 254, 711, 762, 873, 1020, 1157, 1365
DpnII	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
DrdI	GACNNNNNNGTC	1 cut(s)	688
DseDI	GACNNNNNNGTC	1 cut(s)	688
EaeI	YGGCCR	2 cut(s)	444, 1027
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	2 cut(s)	280, 852
Eco147I	AGGCCT	1 cut(s)	1147
Eco24I	GRGCYC	2 cut(s)	138, 728
Eco31I	GGTCTC	2 cut(s)	644, 1251
Eco47I	GGWCC	1 cut(s)	19
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	1 cut(s)	1290
Eco88I	CYCGRG	4 cut(s)	137, 216, 238, 1329
EcoICRI	GAGCTC	1 cut(s)	136
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	1 cut(s)	119
EcoT14I	CCWWGG	2 cut(s)	280, 852
EcoT22I	ATGCAT	1 cut(s)	1090
EcoT38I	GRGCYC	2 cut(s)	138, 728
ErhI	CCWWGG	2 cut(s)	280, 852
Esp3I	CGTCTC	2 cut(s)	44, 213
FaeI	CATG	7 cut(s)	284, 439, 724, 781, 856, 1025, 1092
FatI	CATG	7 cut(s)	280, 435, 720, 777, 852, 1021, 1088
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	2 cut(s)	981, 1369
FbaI	TGATCA	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	4 cut(s)	13, 234, 965, 973
FokI	GGATG	5 cut(s)	92, 509, 612, 1348, 1358
FriOI	GRGCYC	2 cut(s)	138, 728
Fsp4HI	GCNGC	4 cut(s)	13, 234, 965, 973
FspBI	CTAG	1 cut(s)	1283
GluI	GCNGC	4 cut(s)	13, 234, 965, 973
GsaI	CCCAGC	1 cut(s)	562
GsuI	CTGGAG	1 cut(s)	133
HaeIII	GGCC	6 cut(s)	296, 446, 726, 1029, 1098, 1147
HapII	CCGG	5 cut(s)	22, 72, 239, 297, 328
HgaI	GACGC	1 cut(s)	230
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	7 cut(s)	284, 439, 724, 781, 856, 1025, 1092
HincII	GTYRAC	2 cut(s)	359, 405
HindII	GTYRAC	2 cut(s)	359, 405
HpaII	CCGG	5 cut(s)	22, 72, 239, 297, 328
HphI	GGTGA	1 cut(s)	1318
Hpy166II	GTNNAC	3 cut(s)	359, 405, 1326
Hpy188I	TCNGA	6 cut(s)	9, 101, 161, 930, 1138, 1309
Hpy188III	TCNNGA	7 cut(s)	28, 139, 335, 515, 550, 1082, 1125
Hpy8I	GTNNAC	3 cut(s)	359, 405, 1326
Hpy99I	CGWCG	2 cut(s)	47, 58
HpyAV	CCTTC	1 cut(s)	414
HpyCH4III	ACNGT	6 cut(s)	58, 541, 685, 812, 842, 1189
HpyCH4IV	ACGT	2 cut(s)	45, 286
HpyF10VI	GCNNNNNNNGC	6 cut(s)	133, 207, 230, 452, 1167, 1235
HpyF3I	CTNAG	4 cut(s)	408, 641, 648, 1272
HpySE526I	ACGT	2 cut(s)	45, 286
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	7 cut(s)	284, 439, 724, 781, 856, 1025, 1092
Ksp22I	TGATCA	1 cut(s)	1018
Kzo9I	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
LmnI	GCTCC	1 cut(s)	9
Lsp1109I	GCAGC	2 cut(s)	959, 976
LweI	GCATC	3 cut(s)	1045, 1075, 1291
MaeI	CTAG	1 cut(s)	1283
MaeII	ACGT	2 cut(s)	45, 286
MaeIII	GTNAC	3 cut(s)	203, 829, 955
MalI	GATC	9 cut(s)	32, 103, 254, 711, 762, 873, 1020, 1157, 1365
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
MboII	GAAGA	5 cut(s)	31, 451, 757, 1279, 1345
MfeI	CAATTG	2 cut(s)	384, 1429
MflI	RGATCY	3 cut(s)	101, 709, 1363
MhlI	GDGCHC	2 cut(s)	138, 728
MlsI	TGGCCA	1 cut(s)	446
MluCI	AATT	8 cut(s)	95, 175, 384, 670, 986, 1067, 1295, 1429
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	6 cut(s)	13, 400, 698, 809, 934, 1115
MmeI	TCCRAC	1 cut(s)	184
MnlI	CCTC	8 cut(s)	10, 182, 306, 331, 924, 1137, 1273, 1325
Mox20I	TGGCCA	1 cut(s)	446
Mph1103I	ATGCAT	1 cut(s)	1090
MscI	TGGCCA	1 cut(s)	446
MslI	CAYNNNNRTG	3 cut(s)	440, 776, 951
Msp20I	TGGCCA	1 cut(s)	446
MspA1I	CMGCKG	2 cut(s)	201, 558
MspI	CCGG	5 cut(s)	22, 72, 239, 297, 328
MspR9I	CCNGG	5 cut(s)	72, 121, 239, 240, 328
MunI	CAATTG	2 cut(s)	384, 1429
MvaI	CCWGG	1 cut(s)	121
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	6 cut(s)	133, 207, 230, 452, 1167, 1235
NciI	CCSGG	4 cut(s)	72, 239, 240, 328
NcoI	CCATGG	2 cut(s)	280, 852
NdeI	CATATG	2 cut(s)	981, 1369
NdeII	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
NlaIII	CATG	7 cut(s)	284, 439, 724, 781, 856, 1025, 1092
NlaIV	GGNNCC	5 cut(s)	60, 103, 726, 1318, 1365
NmuCI	GTSAC	2 cut(s)	829, 955
NsiI	ATGCAT	1 cut(s)	1090
NspI	RCATGY	1 cut(s)	1092
PaeI	GCATGC	1 cut(s)	1092
PaeR7I	CTCGAG	1 cut(s)	137
PceI	AGGCCT	1 cut(s)	1147
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 59
PfeI	GAWTC	4 cut(s)	331, 389, 511, 999
PflFI	GACNNNGTC	2 cut(s)	72, 224
PinAI	ACCGGT	1 cut(s)	21
PkrI	GCNGC	4 cut(s)	14, 235, 966, 974
PleI	GAGTC	6 cut(s)	12, 400, 697, 808, 933, 1115
PpsI	GAGTC	6 cut(s)	12, 400, 697, 808, 933, 1115
Psp124BI	GAGCTC	1 cut(s)	138
Psp6I	CCWGG	1 cut(s)	119
PspFI	CCCAGC	1 cut(s)	558
PspGI	CCWGG	1 cut(s)	119
PspN4I	GGNNCC	5 cut(s)	60, 103, 726, 1318, 1365
PspOMI	GGGCCC	1 cut(s)	724
PspPI	GGNCC	4 cut(s)	19, 294, 724, 725
PstI	CTGCAG	2 cut(s)	977, 1213
PsuI	RGATCY	3 cut(s)	101, 709, 1363
PsyI	GACNNNGTC	2 cut(s)	72, 224
PvuII	CAGCTG	1 cut(s)	558
RsaI	GTAC	2 cut(s)	382, 522
RsaNI	GTAC	2 cut(s)	381, 521
RseI	CAYNNNNRTG	3 cut(s)	440, 776, 951
SacI	GAGCTC	1 cut(s)	138
SalI	GTCGAC	1 cut(s)	357
SatI	GCNGC	4 cut(s)	13, 234, 965, 973
Sau3AI	GATC	9 cut(s)	30, 101, 252, 709, 760, 871, 1018, 1155, 1363
Sau96I	GGNCC	4 cut(s)	19, 294, 724, 725
ScaI	AGTACT	1 cut(s)	522
SchI	GAGTC	6 cut(s)	13, 400, 698, 809, 934, 1115
ScrFI	CCNGG	5 cut(s)	72, 121, 239, 240, 328
SduI	GDGCHC	2 cut(s)	138, 728
SfaNI	GCATC	3 cut(s)	1045, 1075, 1291
SfcI	CTRYAG	3 cut(s)	537, 973, 1209
Sfr274I	CTCGAG	1 cut(s)	137
SinI	GGWCC	1 cut(s)	19
SlaI	CTCGAG	1 cut(s)	137
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	3 cut(s)	440, 776, 951
SmlI	CTYRAG	2 cut(s)	137, 677
SmoI	CTYRAG	2 cut(s)	137, 677
SphI	GCATGC	1 cut(s)	1092
Sse9I	AATT	8 cut(s)	95, 175, 384, 670, 986, 1067, 1295, 1429
SseBI	AGGCCT	1 cut(s)	1147
SsiI	CCGC	6 cut(s)	12, 165, 199, 234, 1159, 1218
SspI	AATATT	3 cut(s)	352, 530, 1045
SspMI	CTAG	1 cut(s)	1283
SstI	GAGCTC	1 cut(s)	138
StuI	AGGCCT	1 cut(s)	1147
StyD4I	CCNGG	5 cut(s)	70, 119, 237, 238, 326
StyI	CCWWGG	2 cut(s)	280, 852
TaaI	ACNGT	6 cut(s)	58, 541, 685, 812, 842, 1189
TaiI	ACGT	2 cut(s)	48, 289
TasI	AATT	8 cut(s)	95, 175, 384, 670, 986, 1067, 1295, 1429
TatI	WGTACW	1 cut(s)	520
TauI	GCSGC	2 cut(s)	15, 236
TfiI	GAWTC	4 cut(s)	331, 389, 511, 999
TscAI	CASTG	2 cut(s)	901, 1276
TseFI	GTSAC	2 cut(s)	829, 955
TseI	GCWGC	2 cut(s)	964, 972
Tsp45I	GTSAC	2 cut(s)	829, 955
TspDTI	ATGAA	5 cut(s)	452, 753, 871, 998, 1412
TspGWI	ACGGA	1 cut(s)	184
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	2 cut(s)	901, 1276
Tth111I	GACNNNGTC	2 cut(s)	72, 224
VpaK11BI	GGWCC	1 cut(s)	19
XapI	RAATTY	2 cut(s)	95, 1295
XceI	RCATGY	1 cut(s)	1092
XhoI	CTCGAG	1 cut(s)	137
XmaI	CCCGGG	1 cut(s)	238
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	1 cut(s)	1283
ZrmI	AGTACT	1 cut(s)	522
Zsp2I	ATGCAT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.