Rh7DG046300

EXOIII

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
3566973 .. 3572247
5275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG046300.1

Sequence Viewer

Length: 1173 bp
ATGTTGGTCGACCTGCACCAGAACCCAAAGCGATTTGGAAGGAGAGCTGGTAACATGAAGATGGCCACTCTTGCAAATTATTTTGGTCTTGGACAACAAACACACAGGAGTTTAGATGATGTTCGAATGAATCTTGAAGTACTCAAATCTTGTGCTACAGTTTTATTCCTGGAGTACAGCCTCCCGGACATATTAACAGAGAACAGCTGGGTTTCTCCAAATGCTACAACAAGAAGTCGAAGTGTTGGAAAGTCATCTCCTGAGGGGTCAAGCATGAACATAAATATTTCAAATCAAACAGGGGACAATCATCCAATAACATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTTGCTTGAGACTGTCGAGTCCGGCACAAATCGACCAGATCTTTCTGACATGGGCCCACTTATCAATGAAGCGAAGAATGAGTTAGATCAGCAAGACATCAACATGGTGGAAACACCTGCACAAGAGTTTCCCAACAGTTCTCTCAATGCTTCTGTGACCAACAACTGTAATGCCACCATGGATTTTTTACAGCTCAATCAAGTTTTCATTCCTTATATCAGTGCTTCGCTTGTTCCATTGTATCGTGGGAGTCGAAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCCTATGAAATTGCGGTTTGGAATCAATATGAAGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTGGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCACAGAAGTTGTCTTTGGACTCTGGAAGTAGCTCTCAATGGTGGCCTGTTGTGATCCGCAATGAGAGCTTCTACAACTACCCTACTGTGAGATTGCACATAGAAACTGCAGTATACGGGGACATTGCAATCTACGCCACAGAGATATATCAAAGGGACCCCTCTGGCACCGAGCAAAGGCTAGTCTTCTCTAAATTTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATCAGGAACTTGACCGGTTGCCACAGAACAACTTCCAAACTTCGAGTGATGACAGCAGCAATATCTTCGTCTATAATGACACAGACGAAGAATTCCTAG

Protein Analysis

390

Amino Acids

43.62

Weight (kDa)

6.19

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 481
AasI GACNNNNNNGTC 1 cut(s) 373
Acc36I ACCTGC 2 cut(s) 21, 481
AccB1I GGYRCC 2 cut(s) 950, 998
AccI GTMKAC 2 cut(s) 9, 897
AciI CCGC 2 cut(s) 673, 841
AclWI GGATC 3 cut(s) 832, 1040, 1053
AcoI YGGCCR 2 cut(s) 63, 709
AcsI RAATTY 2 cut(s) 977, 1165
AcuI CTGAAG 1 cut(s) 972
AfaI GTAC 2 cut(s) 141, 176
AfiI CCNNNNNNNGG 1 cut(s) 960
AgeI ACCGGT 1 cut(s) 1088
AgsI TTSAA 2 cut(s) 137, 291
AjnI CCWGG 1 cut(s) 168
AjuI GAANNNNNNNTTGG 4 cut(s) 716, 748, 782, 814
AluBI AGCT 6 cut(s) 47, 207, 550, 649, 816, 852
AluI AGCT 6 cut(s) 47, 207, 550, 649, 816, 852
Alw26I GTCTC 3 cut(s) 329, 355, 359
AlwI GGATC 3 cut(s) 832, 1040, 1053
Ama87I CYCGRG 1 cut(s) 1011
AoxI GGCC 5 cut(s) 63, 409, 709, 778, 827
ApaI GGGCCC 1 cut(s) 413
ApeKI GCWGC 3 cut(s) 646, 654, 1130
ApoI RAATTY 2 cut(s) 977, 1165
AsiGI ACCGGT 1 cut(s) 1088
Asp700I GAANNNNTTC 1 cut(s) 1105
AspS9I GGNCC 3 cut(s) 409, 410, 940
AsuC2I CCSGG 1 cut(s) 185
AsuHPI GGTGA 1 cut(s) 1000
AsuII TTCGAA 1 cut(s) 124
AvaI CYCGRG 1 cut(s) 1011
AvaII GGWCC 1 cut(s) 940
AxyI CCTNAGG 1 cut(s) 261
BaeGI GKGCMC 1 cut(s) 413
BalI TGGCCA 1 cut(s) 65
BamHI GGATCC 1 cut(s) 1045
BanI GGYRCC 2 cut(s) 950, 998
BanII GRGCYC 1 cut(s) 413
BbsI GAAGAC 1 cut(s) 961
BbvI GCAGC 3 cut(s) 641, 658, 1142
BccI CCATC 2 cut(s) 55, 770
BcgI CGANNNNNNTGC 4 cut(s) 764, 798, 1122, 1156
BciT130I CCWGG 1 cut(s) 170
BclI TGATCA 1 cut(s) 700
BcnI CCSGG 1 cut(s) 185
BcoDI GTCTC 3 cut(s) 329, 355, 359
BfaI CTAG 2 cut(s) 965, 1171
BfmI CTRYAG 3 cut(s) 156, 655, 891
BfuAI ACCTGC 2 cut(s) 21, 481
BglII AGATCT 1 cut(s) 394
BisI GCNGC 3 cut(s) 647, 655, 1131
BlsI GCNGC 3 cut(s) 648, 656, 1132
BmcAI AGTACT 1 cut(s) 141
Bme1390I CCNGG 2 cut(s) 170, 185
Bme18I GGWCC 1 cut(s) 940
BmeT110I CYCGRG 1 cut(s) 1011
BmgT120I GGNCC 3 cut(s) 409, 410, 940
BmiI GGNNCC 6 cut(s) 411, 941, 942, 952, 1000, 1047
BmrFI CCNGG 2 cut(s) 170, 185
BmsI GCATC 4 cut(s) 727, 757, 973, 1083
BpiI GAAGAC 1 cut(s) 961
BpmI CTGGAG 1 cut(s) 191
Bpu14I TTCGAA 1 cut(s) 124
BpuEI CTTGAG 1 cut(s) 383
BpuMI CCSGG 1 cut(s) 185
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 2 cut(s) 534, 1012
BsaWI WCCGGW 1 cut(s) 1088
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bsc4I CCNNNNNNNGG 1 cut(s) 960
Bse118I RCCGGY 1 cut(s) 1088
Bse21I CCTNAGG 1 cut(s) 261
Bse3DI GCAATG 2 cut(s) 850, 906
BseBI CCWGG 1 cut(s) 170
BseDI CCNNGG 2 cut(s) 534, 1012
BseGI GGATG 4 cut(s) 310, 742, 1023, 1033
BseLI CCNNNNNNNGG 1 cut(s) 960
BseMI GCAATG 2 cut(s) 850, 906
BseMII CTCAG 2 cut(s) 252, 324
BseSI GKGCMC 1 cut(s) 413
BseXI GCAGC 3 cut(s) 641, 658, 1142
BseYI CCCAGC 1 cut(s) 207
BsgI GTGCAG 2 cut(s) 459, 1089
BshFI GGCC 5 cut(s) 65, 411, 711, 780, 829
BshNI GGYRCC 2 cut(s) 950, 998
BshTI ACCGGT 1 cut(s) 1088
BsiHKCI CYCGRG 1 cut(s) 1011
BsiSI CCGG 3 cut(s) 185, 378, 1089
BslFI GGGAC 3 cut(s) 317, 917, 953
BslI CCNNNNNNNGG 1 cut(s) 960
BsmAI GTCTC 3 cut(s) 329, 355, 359
BsmFI GGGAC 3 cut(s) 317, 917, 953
BsnI GGCC 5 cut(s) 65, 411, 711, 780, 829
Bso31I GGTCTC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 1011
Bsp119I TTCGAA 1 cut(s) 124
Bsp120I GGGCCC 1 cut(s) 409
Bsp1286I GDGCHC 1 cut(s) 413
Bsp143I GATC 5 cut(s) 394, 442, 700, 837, 1045
Bsp19I CCATGG 1 cut(s) 534
BspACI CCGC 2 cut(s) 673, 841
BspANI GGCC 5 cut(s) 65, 411, 711, 780, 829
BspCNI CTCAG 2 cut(s) 253, 325
BspLI GGNNCC 6 cut(s) 411, 941, 942, 952, 1000, 1047
BspMAI CTGCAG 2 cut(s) 659, 895
BspMI ACCTGC 2 cut(s) 21, 481
BspPI GGATC 3 cut(s) 832, 1040, 1053
BspT104I TTCGAA 1 cut(s) 124
BspT107I GGYRCC 2 cut(s) 950, 998
BspTNI GGTCTC 1 cut(s) 329
BsrDI GCAATG 2 cut(s) 850, 906
BsrFI RCCGGY 1 cut(s) 1088
BssAI RCCGGY 1 cut(s) 1088
BssECI CCNNGG 2 cut(s) 534, 1012
BssMI GATC 5 cut(s) 394, 442, 700, 837, 1045
BssNAI GTATAC 1 cut(s) 898
BssT1I CCWWGG 1 cut(s) 534
Bst1107I GTATAC 1 cut(s) 898
Bst2UI CCWGG 1 cut(s) 170
Bst4CI ACNGT 5 cut(s) 160, 370, 494, 524, 871
BstBI TTCGAA 1 cut(s) 124
BstC8I GCNNGC 3 cut(s) 709, 772, 1072
BstDEI CTNAG 3 cut(s) 261, 326, 333
BstDSI CCRYGG 1 cut(s) 534
BstF5I GGATG 4 cut(s) 310, 742, 1023, 1033
BstKTI GATC 5 cut(s) 397, 445, 703, 840, 1048
BstMAI GTCTC 3 cut(s) 329, 355, 359
BstMBI GATC 5 cut(s) 394, 442, 700, 837, 1045
BstMWI GCNNNNNNNGC 3 cut(s) 71, 849, 917
BstNI CCWGG 1 cut(s) 170
BstNSI RCATGY 1 cut(s) 774
BstSCI CCNGG 2 cut(s) 168, 183
BstSFI CTRYAG 3 cut(s) 156, 655, 891
BstSLI GKGCMC 1 cut(s) 413
BstV1I GCAGC 3 cut(s) 641, 658, 1142
BstV2I GAAGAC 1 cut(s) 961
BstX2I RGATCY 2 cut(s) 394, 1045
BstYI RGATCY 2 cut(s) 394, 1045
BstZ17I GTATAC 1 cut(s) 898
Bsu36I CCTNAGG 1 cut(s) 261
BsuRI GGCC 5 cut(s) 65, 411, 711, 780, 829
BtgI CCRYGG 1 cut(s) 534
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 4 cut(s) 310, 742, 1023, 1033
BtsIMutI CAGTG 1 cut(s) 583
BveI ACCTGC 2 cut(s) 21, 481
Cac8I GCNNGC 3 cut(s) 709, 772, 1072
Cfr10I RCCGGY 1 cut(s) 1088
Cfr13I GGNCC 3 cut(s) 409, 410, 940
Csp6I GTAC 2 cut(s) 140, 175
CspAI ACCGGT 1 cut(s) 1088
CviAII CATG 7 cut(s) 55, 274, 406, 460, 535, 704, 771
CviQI GTAC 2 cut(s) 140, 175
DdeI CTNAG 3 cut(s) 261, 326, 333
DpnI GATC 5 cut(s) 396, 444, 702, 839, 1047
DpnII GATC 5 cut(s) 394, 442, 700, 837, 1045
DrdI GACNNNNNNGTC 1 cut(s) 373
DseDI GACNNNNNNGTC 1 cut(s) 373
EaeI YGGCCR 2 cut(s) 63, 709
Eco130I CCWWGG 1 cut(s) 534
Eco24I GRGCYC 1 cut(s) 413
Eco31I GGTCTC 1 cut(s) 329
Eco47I GGWCC 1 cut(s) 940
Eco57I CTGAAG 1 cut(s) 972
Eco81I CCTNAGG 1 cut(s) 261
Eco88I CYCGRG 1 cut(s) 1011
EcoO109I RGGNCCY 1 cut(s) 940
EcoRI GAATTC 1 cut(s) 1165
EcoRII CCWGG 1 cut(s) 168
EcoT14I CCWWGG 1 cut(s) 534
EcoT22I ATGCAT 1 cut(s) 772
EcoT38I GRGCYC 1 cut(s) 413
ErhI CCWWGG 1 cut(s) 534
FaeI CATG 7 cut(s) 58, 277, 409, 463, 538, 707, 774
FaqI GGGAC 3 cut(s) 317, 917, 953
FatI CATG 7 cut(s) 54, 273, 405, 459, 534, 703, 770
FauNDI CATATG 1 cut(s) 1051
FbaI TGATCA 1 cut(s) 700
FblI GTMKAC 2 cut(s) 9, 897
Fnu4HI GCNGC 3 cut(s) 647, 655, 1131
FokI GGATG 4 cut(s) 297, 749, 1030, 1040
FriOI GRGCYC 1 cut(s) 413
Fsp4HI GCNGC 3 cut(s) 647, 655, 1131
FspBI CTAG 2 cut(s) 965, 1171
GluI GCNGC 3 cut(s) 647, 655, 1131
GsaI CCCAGC 1 cut(s) 211
GsuI CTGGAG 1 cut(s) 191
HaeIII GGCC 5 cut(s) 65, 411, 711, 780, 829
HapII CCGG 3 cut(s) 185, 378, 1089
Hin1II CATG 7 cut(s) 58, 277, 409, 463, 538, 707, 774
HincII GTYRAC 1 cut(s) 10
HindII GTYRAC 1 cut(s) 10
HinfI GANTC 5 cut(s) 130, 374, 607, 681, 803
HpaII CCGG 3 cut(s) 185, 378, 1089
HphI GGTGA 1 cut(s) 1000
Hpy166II GTNNAC 3 cut(s) 10, 898, 1008
Hpy188I TCNGA 2 cut(s) 403, 991
Hpy188III TCNNGA 5 cut(s) 134, 260, 764, 807, 1078
Hpy8I GTNNAC 3 cut(s) 10, 898, 1008
HpyAV CCTTC 2 cut(s) 33, 606
HpyCH4III ACNGT 5 cut(s) 160, 370, 494, 524, 871
HpyF10VI GCNNNNNNNGC 3 cut(s) 71, 849, 917
HpyF3I CTNAG 3 cut(s) 261, 326, 333
Hsp92II CATG 7 cut(s) 58, 277, 409, 463, 538, 707, 774
KflI GGGWCCC 1 cut(s) 940
Ksp22I TGATCA 1 cut(s) 700
Kzo9I GATC 5 cut(s) 394, 442, 700, 837, 1045
Lsp1109I GCAGC 3 cut(s) 641, 658, 1142
LweI GCATC 4 cut(s) 727, 757, 973, 1083
MaeI CTAG 2 cut(s) 965, 1171
MaeIII GTNAC 3 cut(s) 50, 511, 637
MalI GATC 5 cut(s) 396, 444, 702, 839, 1047
MboI GATC 5 cut(s) 394, 442, 700, 837, 1045
MboII GAAGA 5 cut(s) 70, 442, 961, 1027, 1131
MflI RGATCY 2 cut(s) 394, 1045
MhlI GDGCHC 1 cut(s) 413
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 6 cut(s) 76, 355, 668, 749, 977, 1165
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 3 cut(s) 383, 616, 797
MmeI TCCRAC 1 cut(s) 226
MnlI CCTC 4 cut(s) 191, 256, 955, 1007
Mox20I TGGCCA 1 cut(s) 65
Mph1103I ATGCAT 1 cut(s) 772
MroXI GAANNNNTTC 1 cut(s) 1105
MscI TGGCCA 1 cut(s) 65
MseI TTAA 1 cut(s) 194
MslI CAYNNNNRTG 3 cut(s) 59, 458, 633
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 207
MspI CCGG 3 cut(s) 185, 378, 1089
MspR9I CCNGG 2 cut(s) 170, 185
MvaI CCWGG 1 cut(s) 170
MwoI GCNNNNNNNGC 3 cut(s) 71, 849, 917
NciI CCSGG 1 cut(s) 185
NcoI CCATGG 1 cut(s) 534
NdeI CATATG 1 cut(s) 1051
NdeII GATC 5 cut(s) 394, 442, 700, 837, 1045
NlaIII CATG 7 cut(s) 58, 277, 409, 463, 538, 707, 774
NlaIV GGNNCC 6 cut(s) 411, 941, 942, 952, 1000, 1047
NmuCI GTSAC 2 cut(s) 511, 637
NsiI ATGCAT 1 cut(s) 772
NspI RCATGY 1 cut(s) 774
NspV TTCGAA 1 cut(s) 124
PaeI GCATGC 1 cut(s) 774
PaqCI CACCTGC 1 cut(s) 481
PcsI WCGNNNNNNNCGW 1 cut(s) 607
PdmI GAANNNNTTC 1 cut(s) 1105
PfeI GAWTC 2 cut(s) 130, 681
PfoI TCCNGGA 2 cut(s) 168, 183
PinAI ACCGGT 1 cut(s) 1088
PkrI GCNGC 3 cut(s) 648, 656, 1132
PleI GAGTC 3 cut(s) 382, 615, 797
PpsI GAGTC 3 cut(s) 382, 615, 797
PpuMI RGGWCCY 1 cut(s) 940
Psp5II RGGWCCY 1 cut(s) 940
Psp6I CCWGG 1 cut(s) 168
PspFI CCCAGC 1 cut(s) 207
PspGI CCWGG 1 cut(s) 168
PspN4I GGNNCC 6 cut(s) 411, 941, 942, 952, 1000, 1047
PspOMI GGGCCC 1 cut(s) 409
PspPI GGNCC 3 cut(s) 409, 410, 940
PspPPI RGGWCCY 1 cut(s) 940
PstI CTGCAG 2 cut(s) 659, 895
PsuI RGATCY 2 cut(s) 394, 1045
PvuII CAGCTG 1 cut(s) 207
RsaI GTAC 2 cut(s) 141, 176
RsaNI GTAC 2 cut(s) 140, 175
RseI CAYNNNNRTG 3 cut(s) 59, 458, 633
SalI GTCGAC 1 cut(s) 8
SaqAI TTAA 1 cut(s) 194
SatI GCNGC 3 cut(s) 647, 655, 1131
Sau3AI GATC 5 cut(s) 394, 442, 700, 837, 1045
Sau96I GGNCC 3 cut(s) 409, 410, 940
ScaI AGTACT 1 cut(s) 141
SchI GAGTC 3 cut(s) 383, 616, 797
ScrFI CCNGG 2 cut(s) 170, 185
SduI GDGCHC 1 cut(s) 413
SetI ASST 8 cut(s) 15, 49, 209, 475, 552, 651, 818, 854
SfaNI GCATC 4 cut(s) 727, 757, 973, 1083
SfcI CTRYAG 3 cut(s) 156, 655, 891
SfuI TTCGAA 1 cut(s) 124
SinI GGWCC 1 cut(s) 940
SmiMI CAYNNNNRTG 3 cut(s) 59, 458, 633
SmlI CTYRAG 1 cut(s) 362
SmoI CTYRAG 1 cut(s) 362
SphI GCATGC 1 cut(s) 774
Sse9I AATT 6 cut(s) 76, 355, 668, 749, 977, 1165
SsiI CCGC 2 cut(s) 673, 841
SspI AATATT 2 cut(s) 286, 727
SspMI CTAG 2 cut(s) 965, 1171
StyD4I CCNGG 2 cut(s) 168, 183
StyI CCWWGG 1 cut(s) 534
TaaI ACNGT 5 cut(s) 160, 370, 494, 524, 871
TaqI TCGA 7 cut(s) 9, 124, 238, 372, 388, 610, 1117
TasI AATT 6 cut(s) 76, 355, 668, 749, 977, 1165
TatI WGTACW 2 cut(s) 139, 174
TfiI GAWTC 2 cut(s) 130, 681
Tru1I TTAA 1 cut(s) 194
Tru9I TTAA 1 cut(s) 194
TscAI CASTG 1 cut(s) 583
TseFI GTSAC 2 cut(s) 511, 637
TseI GCWGC 3 cut(s) 646, 654, 1130
Tsp45I GTSAC 2 cut(s) 511, 637
TspDTI ATGAA 7 cut(s) 71, 143, 290, 438, 553, 680, 704
TspRI CASTG 1 cut(s) 583
VpaK11BI GGWCC 1 cut(s) 940
XapI RAATTY 2 cut(s) 977, 1165
XceI RCATGY 1 cut(s) 774
XmiI GTMKAC 2 cut(s) 9, 897
XmnI GAANNNNTTC 1 cut(s) 1105
XspI CTAG 2 cut(s) 965, 1171
ZrmI AGTACT 1 cut(s) 141
Zsp2I ATGCAT 1 cut(s) 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.