Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004362

Physical Location & Seq

Genomic Coordinates Forward (+)

3104762 .. 3107542

Gene Structure 2781 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG047100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGAGTCGGAGCGGCGAGGACCGGTTCGAGATCGCGTTCTTCGACGTGGAGACGACGGTGCCGACCCGACCCGGTCAGGGCTTCGCCTTATTGGAATTCGGATCCATACTTGTTTGCCCCAGGAAGCTGATTGAGCTCAAGAGCTACTCCACTCTAATCCGACCCGCCGACCTCAATTCTATCAACTCCTTGTCCGTCCGCTGTAACGGCATTACCCGAGACGCCGTCATCGCCGCCCCGGGCTTCGATAAGATCGCCGATAGAGTTTTCGACATTCTCCATGGACGTATATGGGCCGGTCATAATATATTGAGGTTTGATTGCCCCCGGATTCGGGAGGCTTTTGCAAATATTGGTCGACCTGCACCAGAACCCAAGGGTACAATTGATTCTTTGGCTTTGTTGACTCAGCGATTTGGAAGGAGAGCTGGTAACATGAAGATGGCCACTCTTGCAACCTATTTTGGTCTTGGACAACAGACACACAGGAGTTTGGATGATGTTCGAATGAATCTTGAAGTACTCAAATATTGTGCTACAGTTTTATTCTTGGAGTCAAGCCTCCCGGACATATTAACAGAGAACAGTTGGGTTGCTCCAAATGCTACAACAAGAAGTCGAAGTGGTGGAAAGTTATCTCCTGAGGGGTCAAGCATGAACATAAATATTTCGAATCAACCAGGGGACAATCATCCAATAACATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTCACAAGAAGTCTCTAATTTGCTTGAGACTGTCAGCACAAATCGACCAGATCCTTTTGACATGGGCCCACTTATCAATGAAGTGAAGACAGAGTTAGATCAGCAAGACCTCAACATGGTGGAAATACCTGCACAAGAGTCTCCCAACAGTTCTTTCAATGCTTCTGTGACCAACAACTGTAATGCCACCACGGATTTTTTACAGCTCGATCAAGTTTCCATTCCTTATATCAGTGCTTCTCTTGTTCCATTGTATCGTGGGAGTCAAAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCATATGAAATTGCGGTTTGGAATCAATACGAAGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTTGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCACAGAAGTTGTCTTTGGACTCTGGAAGTAGCTCTCAATGGTGGCCTGTTGTGATCCGCAAAGAGGGCTTCTACAACTACCCTACTGTGAGATTACACATACAAACTGCAGTATGCGGGGACATTGCAATCTACGCCACAGAGATATATCAAAGAGACCCCTCTGGCACCGAGCAAAGGCTAGTCTTCTCTAAATTTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATTAGGTTGGTGGCAAAGAAACTGATTATTCATTCCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008408 GO:0009380 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0030312 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:1901360 GO:1902494 GO:1905347 GO:1905348 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNase_T

Protein Analysis

502

Amino Acids

55.88

Weight (kDa)

6.18

Isoelectric Point (pI)

48.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_T	PF00929	13 - 175	4.4e-24	Exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74390 AT1G74390 AT1G74390 AT1G74390 AT5G07710 AT5G61390
fragaria_vesca	FvH4_5g14590 FvH4_5g14590 FvH4_5g14590
malus_domestica	MD06G1197200.v1.1 MD14G1204200.v1.1 MD14G1204300.v1.1 MD14G1204400.v1.1
prunus_persica	Prupe.5G197500_v2.0.a1 Prupe.5G197500_v2.0.a1 Prupe.5G197700_v2.0.a1
pyrus_communis	pycom06g17400 pycom14g16890
rosa_chinensis	RchiOBHm_Chr7g0181951 RchiOBHm_Chr7g0181981
rosa_laevigata	RLG00000005164
rosa_roxburghii	Rroxscaffold_3G00271650
rosa_rugosa	Rorug06G0444900
rosa_samantha	Rh7AG047200 Rh7BG046800 Rh7BG047100 Rh7CG047300 Rh7CG047400 Rh7DG046300 Rh7DG046400
rosa_wichuraiana	Rw0G019670 Rw7G003910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	370, 874
AccB1I	GGYRCC	3 cut(s)	58, 1343, 1391
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	1 cut(s)	358
AccII	CGCG	1 cut(s)	35
AciI	CCGC	7 cut(s)	12, 165, 199, 234, 1066, 1234, 1293
AclWI	GGATC	6 cut(s)	96, 109, 782, 1225, 1433, 1446
AcoI	YGGCCR	2 cut(s)	444, 1102
AcsI	RAATTY	2 cut(s)	95, 1370
AcuI	CTGAAG	1 cut(s)	1365
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	2 cut(s)	382, 522
AfiI	CCNNNNNNNGG	6 cut(s)	77, 333, 334, 853, 1240, 1353
AgeI	ACCGGT	1 cut(s)	21
AgsI	TTSAA	2 cut(s)	518, 895
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	2 cut(s)	119, 679
AjuI	GAANNNNNNNTTGG	4 cut(s)	875, 907, 1175, 1207
AluBI	AGCT	7 cut(s)	127, 136, 144, 428, 943, 1042, 1209
AluI	AGCT	7 cut(s)	127, 136, 144, 428, 943, 1042, 1209
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	8 cut(s)	44, 213, 710, 736, 754, 758, 882, 1326
AlwI	GGATC	6 cut(s)	96, 109, 782, 1225, 1433, 1446
Ama87I	CYCGRG	3 cut(s)	216, 238, 1404
AoxI	GGCC	6 cut(s)	294, 444, 802, 1102, 1171, 1220
ApaI	GGGCCC	1 cut(s)	806
ApeKI	GCWGC	2 cut(s)	1039, 1047
ApoI	RAATTY	2 cut(s)	95, 1370
AsiGI	ACCGGT	1 cut(s)	21
AspS9I	GGNCC	4 cut(s)	19, 294, 802, 803
AsuC2I	CCSGG	5 cut(s)	72, 239, 240, 328, 566
AsuHPI	GGTGA	1 cut(s)	1393
AsuII	TTCGAA	2 cut(s)	505, 671
AvaI	CYCGRG	3 cut(s)	216, 238, 1404
AvaII	GGWCC	1 cut(s)	19
AxyI	CCTNAGG	1 cut(s)	642
BaeGI	GKGCMC	1 cut(s)	806
BalI	TGGCCA	1 cut(s)	446
BamHI	GGATCC	2 cut(s)	101, 1438
BanI	GGYRCC	3 cut(s)	58, 1343, 1391
BanII	GRGCYC	2 cut(s)	138, 806
BbsI	GAAGAC	2 cut(s)	830, 1354
Bbv12I	GWGCWC	1 cut(s)	138
BbvI	GCAGC	2 cut(s)	1034, 1051
BccI	CCATC	2 cut(s)	436, 1163
BceAI	ACGGC	2 cut(s)	209, 223
BcgI	CGANNNNNNTGC	2 cut(s)	1157, 1191
BciT130I	CCWGG	2 cut(s)	121, 681
BclI	TGATCA	1 cut(s)	1093
BcnI	CCSGG	5 cut(s)	72, 239, 240, 328, 566
BcoDI	GTCTC	8 cut(s)	44, 213, 710, 736, 754, 758, 882, 1326
BfaI	CTAG	1 cut(s)	1358
BfmI	CTRYAG	3 cut(s)	537, 1048, 1284
BfuAI	ACCTGC	2 cut(s)	370, 874
BisI	GCNGC	4 cut(s)	13, 234, 1040, 1048
BlsI	GCNGC	4 cut(s)	14, 235, 1041, 1049
BmcAI	AGTACT	1 cut(s)	522
Bme1390I	CCNGG	7 cut(s)	72, 121, 239, 240, 328, 566, 681
Bme18I	GGWCC	1 cut(s)	19
BmeT110I	CYCGRG	3 cut(s)	216, 238, 1404
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	4 cut(s)	19, 294, 802, 803
BmiI	GGNNCC	6 cut(s)	60, 103, 804, 1345, 1393, 1440
BmrFI	CCNGG	7 cut(s)	72, 121, 239, 240, 328, 566, 681
BmsI	GCATC	3 cut(s)	1120, 1150, 1366
BpiI	GAAGAC	2 cut(s)	830, 1354
Bpu14I	TTCGAA	2 cut(s)	505, 671
BpuEI	CTTGAG	2 cut(s)	122, 782
BpuMI	CCSGG	5 cut(s)	72, 239, 240, 328, 566
BsaHI	GRCGYC	1 cut(s)	222
BsaI	GGTCTC	2 cut(s)	710, 1326
BsaJI	CCNNGG	9 cut(s)	119, 237, 238, 280, 326, 375, 680, 927, 1405
BsaWI	WCCGGW	1 cut(s)	21
BsaXI	ACNNNNNCTCC	2 cut(s)	415, 445
Bsc4I	CCNNNNNNNGG	6 cut(s)	77, 333, 334, 853, 1240, 1353
Bse118I	RCCGGY	2 cut(s)	21, 296
Bse21I	CCTNAGG	1 cut(s)	642
Bse3DI	GCAATG	1 cut(s)	1299
BseBI	CCWGG	2 cut(s)	121, 681
BseDI	CCNNGG	9 cut(s)	119, 237, 238, 280, 326, 375, 680, 927, 1405
BseGI	GGATG	4 cut(s)	502, 691, 1416, 1426
BseLI	CCNNNNNNNGG	6 cut(s)	77, 333, 334, 853, 1240, 1353
BseMI	GCAATG	1 cut(s)	1299
BseMII	CTCAG	3 cut(s)	422, 633, 705
BseSI	GKGCMC	1 cut(s)	806
BseXI	GCAGC	2 cut(s)	1034, 1051
BsgI	GTGCAG	3 cut(s)	348, 852, 1482
Bsh1236I	CGCG	1 cut(s)	35
BshFI	GGCC	6 cut(s)	296, 446, 804, 1104, 1173, 1222
BshNI	GGYRCC	3 cut(s)	58, 1343, 1391
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	138
BsiHKCI	CYCGRG	3 cut(s)	216, 238, 1404
BsiSI	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
BslFI	GGGAC	2 cut(s)	698, 1310
BslI	CCNNNNNNNGG	6 cut(s)	77, 333, 334, 853, 1240, 1353
BsmAI	GTCTC	8 cut(s)	44, 213, 710, 736, 754, 758, 882, 1326
BsmBI	CGTCTC	2 cut(s)	44, 213
BsmFI	GGGAC	2 cut(s)	698, 1310
BsnI	GGCC	6 cut(s)	296, 446, 804, 1104, 1173, 1222
Bso31I	GGTCTC	2 cut(s)	710, 1326
BsoBI	CYCGRG	3 cut(s)	216, 238, 1404
Bsp119I	TTCGAA	2 cut(s)	505, 671
Bsp120I	GGGCCC	1 cut(s)	802
Bsp1286I	GDGCHC	2 cut(s)	138, 806
Bsp143I	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
Bsp19I	CCATGG	1 cut(s)	280
BspACI	CCGC	7 cut(s)	12, 165, 199, 234, 1066, 1234, 1293
BspANI	GGCC	6 cut(s)	296, 446, 804, 1104, 1173, 1222
BspCNI	CTCAG	3 cut(s)	421, 634, 706
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	6 cut(s)	60, 103, 804, 1345, 1393, 1440
BspMAI	CTGCAG	2 cut(s)	1052, 1288
BspMI	ACCTGC	2 cut(s)	370, 874
BspPI	GGATC	6 cut(s)	96, 109, 782, 1225, 1433, 1446
BspT104I	TTCGAA	2 cut(s)	505, 671
BspT107I	GGYRCC	3 cut(s)	58, 1343, 1391
BspTNI	GGTCTC	2 cut(s)	710, 1326
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	1 cut(s)	1299
BsrFI	RCCGGY	2 cut(s)	21, 296
BssAI	RCCGGY	2 cut(s)	21, 296
BssECI	CCNNGG	9 cut(s)	119, 237, 238, 280, 326, 375, 680, 927, 1405
BssMI	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
BssNI	GRCGYC	1 cut(s)	222
BssT1I	CCWWGG	2 cut(s)	280, 375
Bst2UI	CCWGG	2 cut(s)	121, 681
Bst4CI	ACNGT	7 cut(s)	58, 541, 587, 769, 887, 917, 1264
BstACI	GRCGYC	1 cut(s)	222
BstBI	TTCGAA	2 cut(s)	505, 671
BstC8I	GCNNGC	3 cut(s)	1102, 1165, 1465
BstDEI	CTNAG	4 cut(s)	408, 642, 707, 714
BstDSI	CCRYGG	2 cut(s)	280, 927
BstF5I	GGATG	4 cut(s)	502, 691, 1416, 1426
BstFNI	CGCG	1 cut(s)	35
BstKTI	GATC	9 cut(s)	33, 104, 255, 790, 838, 949, 1096, 1233, 1441
BstMAI	GTCTC	8 cut(s)	44, 213, 710, 736, 754, 758, 882, 1326
BstMBI	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
BstMWI	GCNNNNNNNGC	7 cut(s)	133, 207, 230, 452, 602, 1242, 1310
BstNI	CCWGG	2 cut(s)	121, 681
BstNSI	RCATGY	1 cut(s)	1167
BstSCI	CCNGG	7 cut(s)	70, 119, 237, 238, 326, 564, 679
BstSFI	CTRYAG	3 cut(s)	537, 1048, 1284
BstSLI	GKGCMC	1 cut(s)	806
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	2 cut(s)	1034, 1051
BstV2I	GAAGAC	2 cut(s)	830, 1354
BstX2I	RGATCY	3 cut(s)	101, 787, 1438
BstYI	RGATCY	3 cut(s)	101, 787, 1438
Bsu36I	CCTNAGG	1 cut(s)	642
BsuRI	GGCC	6 cut(s)	296, 446, 804, 1104, 1173, 1222
BtgI	CCRYGG	2 cut(s)	280, 927
BtgZI	GCGATG	2 cut(s)	214, 1182
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	4 cut(s)	502, 691, 1416, 1426
BtsIMutI	CAGTG	1 cut(s)	976
BveI	ACCTGC	2 cut(s)	370, 874
Cac8I	GCNNGC	3 cut(s)	1102, 1165, 1465
Cfr10I	RCCGGY	2 cut(s)	21, 296
Cfr13I	GGNCC	4 cut(s)	19, 294, 802, 803
Cfr9I	CCCGGG	1 cut(s)	238
CseI	GACGC	1 cut(s)	230
Csp6I	GTAC	2 cut(s)	381, 521
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	7 cut(s)	281, 436, 655, 799, 853, 1097, 1164
CviQI	GTAC	2 cut(s)	381, 521
DdeI	CTNAG	4 cut(s)	408, 642, 707, 714
DpnI	GATC	9 cut(s)	32, 103, 254, 789, 837, 948, 1095, 1232, 1440
DpnII	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
EaeI	YGGCCR	2 cut(s)	444, 1102
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	2 cut(s)	280, 375
Eco24I	GRGCYC	2 cut(s)	138, 806
Eco31I	GGTCTC	2 cut(s)	710, 1326
Eco47I	GGWCC	1 cut(s)	19
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	1 cut(s)	1365
Eco81I	CCTNAGG	1 cut(s)	642
Eco88I	CYCGRG	3 cut(s)	216, 238, 1404
EcoICRI	GAGCTC	1 cut(s)	136
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	2 cut(s)	119, 679
EcoT14I	CCWWGG	2 cut(s)	280, 375
EcoT22I	ATGCAT	1 cut(s)	1165
EcoT38I	GRGCYC	2 cut(s)	138, 806
ErhI	CCWWGG	2 cut(s)	280, 375
Esp3I	CGTCTC	2 cut(s)	44, 213
FaeI	CATG	7 cut(s)	284, 439, 658, 802, 856, 1100, 1167
FaqI	GGGAC	2 cut(s)	698, 1310
FatI	CATG	7 cut(s)	280, 435, 654, 798, 852, 1096, 1163
FauI	CCCGC	2 cut(s)	172, 1286
FauNDI	CATATG	2 cut(s)	1056, 1444
FbaI	TGATCA	1 cut(s)	1093
FblI	GTMKAC	1 cut(s)	358
Fnu4HI	GCNGC	4 cut(s)	13, 234, 1040, 1048
FokI	GGATG	4 cut(s)	509, 678, 1423, 1433
FriOI	GRGCYC	2 cut(s)	138, 806
Fsp4HI	GCNGC	4 cut(s)	13, 234, 1040, 1048
FspBI	CTAG	1 cut(s)	1358
GluI	GCNGC	4 cut(s)	13, 234, 1040, 1048
HaeIII	GGCC	6 cut(s)	296, 446, 804, 1104, 1173, 1222
HapII	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
HgaI	GACGC	1 cut(s)	230
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	7 cut(s)	284, 439, 658, 802, 856, 1100, 1167
HincII	GTYRAC	2 cut(s)	359, 405
HindII	GTYRAC	2 cut(s)	359, 405
HpaII	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
HphI	GGTGA	1 cut(s)	1393
Hpy166II	GTNNAC	3 cut(s)	359, 405, 1401
Hpy188I	TCNGA	4 cut(s)	9, 101, 161, 1384
Hpy188III	TCNNGA	7 cut(s)	28, 139, 335, 515, 641, 1157, 1200
Hpy8I	GTNNAC	3 cut(s)	359, 405, 1401
Hpy99I	CGWCG	2 cut(s)	47, 58
HpyAV	CCTTC	1 cut(s)	414
HpyCH4III	ACNGT	7 cut(s)	58, 541, 587, 769, 887, 917, 1264
HpyCH4IV	ACGT	2 cut(s)	45, 286
HpyF10VI	GCNNNNNNNGC	7 cut(s)	133, 207, 230, 452, 602, 1242, 1310
HpyF3I	CTNAG	4 cut(s)	408, 642, 707, 714
HpySE526I	ACGT	2 cut(s)	45, 286
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	7 cut(s)	284, 439, 658, 802, 856, 1100, 1167
Ksp22I	TGATCA	1 cut(s)	1093
Kzo9I	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
LmnI	GCTCC	2 cut(s)	9, 601
Lsp1109I	GCAGC	2 cut(s)	1034, 1051
LweI	GCATC	3 cut(s)	1120, 1150, 1366
MaeI	CTAG	1 cut(s)	1358
MaeII	ACGT	2 cut(s)	45, 286
MaeIII	GTNAC	4 cut(s)	203, 431, 904, 1030
MalI	GATC	9 cut(s)	32, 103, 254, 789, 837, 948, 1095, 1232, 1440
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
MboII	GAAGA	5 cut(s)	31, 451, 835, 1354, 1420
MfeI	CAATTG	2 cut(s)	384, 1504
MflI	RGATCY	3 cut(s)	101, 787, 1438
MhlI	GDGCHC	2 cut(s)	138, 806
MlsI	TGGCCA	1 cut(s)	446
MluCI	AATT	9 cut(s)	95, 175, 384, 736, 754, 1061, 1142, 1370, 1504
MluNI	TGGCCA	1 cut(s)	446
MlyI	GAGTC	6 cut(s)	13, 400, 563, 884, 1009, 1190
MmeI	TCCRAC	1 cut(s)	184
Mox20I	TGGCCA	1 cut(s)	446
Mph1103I	ATGCAT	1 cut(s)	1165
MscI	TGGCCA	1 cut(s)	446
MseI	TTAA	1 cut(s)	575
MslI	CAYNNNNRTG	2 cut(s)	440, 1026
Msp20I	TGGCCA	1 cut(s)	446
MspA1I	CMGCKG	1 cut(s)	201
MspI	CCGG	6 cut(s)	22, 72, 239, 297, 328, 566
MspR9I	CCNGG	7 cut(s)	72, 121, 239, 240, 328, 566, 681
MunI	CAATTG	2 cut(s)	384, 1504
MvaI	CCWGG	2 cut(s)	121, 681
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	7 cut(s)	133, 207, 230, 452, 602, 1242, 1310
NciI	CCSGG	5 cut(s)	72, 239, 240, 328, 566
NcoI	CCATGG	1 cut(s)	280
NdeI	CATATG	2 cut(s)	1056, 1444
NdeII	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
NlaIII	CATG	7 cut(s)	284, 439, 658, 802, 856, 1100, 1167
NlaIV	GGNNCC	6 cut(s)	60, 103, 804, 1345, 1393, 1440
NmuCI	GTSAC	2 cut(s)	904, 1030
NsiI	ATGCAT	1 cut(s)	1165
NspI	RCATGY	1 cut(s)	1167
NspV	TTCGAA	2 cut(s)	505, 671
PaeI	GCATGC	1 cut(s)	1167
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 59
PfeI	GAWTC	5 cut(s)	331, 389, 511, 673, 1074
PflFI	GACNNNGTC	2 cut(s)	72, 224
PfoI	TCCNGGA	1 cut(s)	564
PinAI	ACCGGT	1 cut(s)	21
PkrI	GCNGC	4 cut(s)	14, 235, 1041, 1049
PleI	GAGTC	6 cut(s)	12, 400, 562, 883, 1008, 1190
PpsI	GAGTC	6 cut(s)	12, 400, 562, 883, 1008, 1190
Psp124BI	GAGCTC	1 cut(s)	138
Psp6I	CCWGG	2 cut(s)	119, 679
PspGI	CCWGG	2 cut(s)	119, 679
PspN4I	GGNNCC	6 cut(s)	60, 103, 804, 1345, 1393, 1440
PspOMI	GGGCCC	1 cut(s)	802
PspPI	GGNCC	4 cut(s)	19, 294, 802, 803
PstI	CTGCAG	2 cut(s)	1052, 1288
PsuI	RGATCY	3 cut(s)	101, 787, 1438
PsyI	GACNNNGTC	2 cut(s)	72, 224
RsaI	GTAC	2 cut(s)	382, 522
RsaNI	GTAC	2 cut(s)	381, 521
RseI	CAYNNNNRTG	2 cut(s)	440, 1026
SacI	GAGCTC	1 cut(s)	138
SalI	GTCGAC	1 cut(s)	357
SaqAI	TTAA	1 cut(s)	575
SatI	GCNGC	4 cut(s)	13, 234, 1040, 1048
Sau3AI	GATC	9 cut(s)	30, 101, 252, 787, 835, 946, 1093, 1230, 1438
Sau96I	GGNCC	4 cut(s)	19, 294, 802, 803
ScaI	AGTACT	1 cut(s)	522
SchI	GAGTC	6 cut(s)	13, 400, 563, 884, 1009, 1190
ScrFI	CCNGG	7 cut(s)	72, 121, 239, 240, 328, 566, 681
SduI	GDGCHC	2 cut(s)	138, 806
SfaNI	GCATC	3 cut(s)	1120, 1150, 1366
SfcI	CTRYAG	3 cut(s)	537, 1048, 1284
SfuI	TTCGAA	2 cut(s)	505, 671
SinI	GGWCC	1 cut(s)	19
SmaI	CCCGGG	1 cut(s)	240
SmiMI	CAYNNNNRTG	2 cut(s)	440, 1026
SmlI	CTYRAG	2 cut(s)	137, 761
SmoI	CTYRAG	2 cut(s)	137, 761
SphI	GCATGC	1 cut(s)	1167
Sse9I	AATT	9 cut(s)	95, 175, 384, 736, 754, 1061, 1142, 1370, 1504
SsiI	CCGC	7 cut(s)	12, 165, 199, 234, 1066, 1234, 1293
SspI	AATATT	4 cut(s)	352, 530, 667, 1120
SspMI	CTAG	1 cut(s)	1358
SstI	GAGCTC	1 cut(s)	138
StyD4I	CCNGG	7 cut(s)	70, 119, 237, 238, 326, 564, 679
StyI	CCWWGG	2 cut(s)	280, 375
TaaI	ACNGT	7 cut(s)	58, 541, 587, 769, 887, 917, 1264
TaiI	ACGT	2 cut(s)	48, 289
TasI	AATT	9 cut(s)	95, 175, 384, 736, 754, 1061, 1142, 1370, 1504
TatI	WGTACW	1 cut(s)	520
TauI	GCSGC	2 cut(s)	15, 236
TfiI	GAWTC	5 cut(s)	331, 389, 511, 673, 1074
Tru1I	TTAA	1 cut(s)	575
Tru9I	TTAA	1 cut(s)	575
TscAI	CASTG	1 cut(s)	976
TseFI	GTSAC	2 cut(s)	904, 1030
TseI	GCWGC	2 cut(s)	1039, 1047
Tsp45I	GTSAC	2 cut(s)	904, 1030
TspDTI	ATGAA	6 cut(s)	452, 524, 671, 831, 1073, 1487
TspGWI	ACGGA	2 cut(s)	184, 944
TspMI	CCCGGG	1 cut(s)	238
TspRI	CASTG	1 cut(s)	976
Tth111I	GACNNNGTC	2 cut(s)	72, 224
VpaK11BI	GGWCC	1 cut(s)	19
XapI	RAATTY	2 cut(s)	95, 1370
XceI	RCATGY	1 cut(s)	1167
XmaI	CCCGGG	1 cut(s)	238
XmiI	GTMKAC	1 cut(s)	358
XspI	CTAG	1 cut(s)	1358
ZrmI	AGTACT	1 cut(s)	522
Zsp2I	ATGCAT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.