Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004362

Physical Location & Seq

Genomic Coordinates Forward (+)

3094092 .. 3096951

Gene Structure 2860 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG046800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGAGTCGGAGCGGCGAGGACCGGTTCGAGATCGCGTTCTTCGACGTGGAGACGACCCGACCCGGTCAGGGCTTCGCCTTATTGGAATTCGGATCCATCCTCGTTTGCCCCAGGAAGCTGATTGAGCTCGAGAGCTACTCCACTCTAATCCGACCCGCCGACCTCAATTCCATCAACTCCTTGTCCGTCCGCTGTAACGGCATTACCCGAGACGCCGTCATTGCCGCCCCGGGCTTCGATGAGATCGCCAATAGAGTTTTCGACATTCTCCATGGACGTATATGGGCCGGTCATAATATATTGAGGTTTGATTGTCCCCTGATTCGGGAGGCTTTTGCAAATATTGGTCGACCTGCACCAGAACCCAAAGGTACAATTGATTCTTTGGTTTTGTTGACTCAACGATTTGGAAGGAGAGCTGGTAACATGAAGATGGCCACTCTTGCAACTTATTTTGGTCTTGGACAACAGACACACAGGAGTTTGGATGATGTTCGAATGAATCTTGAAGTACTCAAATATTGTGCTACAGTTTTATTCTTGGAGTCAAGCCTCCCGGACATATTAACAGAGAACAGCTGGGTTTCTCCAAATGCTACAACAAGAAGTCGAAGTGCTGGAAAGTTATCTCCTGAGGGGTCAAGCATGAACATAAATATTTCAAATCAAACAGGGGACAATCATCCAATAACATCTCTTAGGACTGAGACCACACAAGAAGTCTCTAATTTGCTTGAGACTGTCGAGTCCAGCACAAATCGACCAGATCTTTCTGACATGGGCCCACTTATCAATGAAGTGAAGAATGAGTTAGATCAGCAAGACATCAACATGGTGGAAACACCTGCACAAGAGTCTCCCAACAGTTCTCATAATGCTTCTGTGACCAACAACTGTAATGCCACCATGGATTTTTTACAGCTCGATCAAGTTTTCATTCCTTATATCAGTGCTTCGTTTGTTCCATTGTATTGTGGGAGTCAAAGGATAAAGTTATTACACAAAGATGTCACTTTGCAGCTTTGCTGCAGTCATATGAAATTGCGGTTTGGAATCAATATGATGTTTTTTGATCATGCTGGCCGACCACGACTGAATATTGTCTTTGATGCACCACCAAAATTATGTGAAGTTCTTGATGCATGCGATGGCCTTGCACAGAAGTTGTCTTTGGACTCTGGAAGCAGCTCTGAATGGAGGCCTGTTGTGATCCGCAAAGAGGACTTCTACAACTACCCTACTGTGAGATTGCACATACAAACTGCAGTATACGGGGACATTGCAATCTACGCCACAGAGATATATCAAAGAGACTCCTCTGGCACCGAGCAAAGGCTAGTCTTCTCTAAAATTGATGCTTCAGAACTTGGTGCCTTGTTCACCCGAGGGATGTTTATGGATGTGTTCTTCTCTTTGGATCCATATGACTATCAGCAGAGTGCAGGCATTAGGTTGGTGGCAAAGAAACTGATTATTCATTCCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008408 GO:0009380 GO:0009987 GO:0016020 GO:0016787 GO:0016788 GO:0030312 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:0090305 GO:1901360 GO:1902494 GO:1905347 GO:1905348 GO:1990391

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RNase_T

Protein Analysis

495

Amino Acids

55.27

Weight (kDa)

5.48

Isoelectric Point (pI)

49.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_T	PF00929	13 - 172	1.1e-24	Exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004362)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74390 AT1G74390 AT1G74390 AT1G74390 AT5G07710 AT5G61390
fragaria_vesca	FvH4_5g14590 FvH4_5g14590 FvH4_5g14590
malus_domestica	MD06G1197200.v1.1 MD14G1204200.v1.1 MD14G1204300.v1.1 MD14G1204400.v1.1
prunus_persica	Prupe.5G197500_v2.0.a1 Prupe.5G197500_v2.0.a1 Prupe.5G197700_v2.0.a1
pyrus_communis	pycom06g17400 pycom14g16890
rosa_chinensis	RchiOBHm_Chr7g0181951 RchiOBHm_Chr7g0181981
rosa_laevigata	RLG00000005164
rosa_roxburghii	Rroxscaffold_3G00271650
rosa_rugosa	Rorug06G0444900
rosa_samantha	Rh7AG047200 Rh7BG046800 Rh7BG047100 Rh7CG047300 Rh7CG047400 Rh7DG046300 Rh7DG046400
rosa_wichuraiana	Rw0G019670 Rw7G003910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	853
AasI	GACNNNNNNGTC	1 cut(s)	745
Acc36I	ACCTGC	2 cut(s)	361, 853
AccB1I	GGYRCC	2 cut(s)	1322, 1370
AccBSI	CCGCTC	1 cut(s)	12
AccI	GTMKAC	2 cut(s)	349, 1269
AccII	CGCG	1 cut(s)	35
AciI	CCGC	6 cut(s)	12, 156, 190, 225, 1045, 1213
AclWI	GGATC	5 cut(s)	87, 100, 1204, 1412, 1425
AcoI	YGGCCR	2 cut(s)	435, 1081
AcsI	RAATTY	1 cut(s)	86
AcuI	CTGAAG	1 cut(s)	1344
AcyI	GRCGYC	1 cut(s)	213
AfaI	GTAC	2 cut(s)	373, 513
AfiI	CCNNNNNNNGG	5 cut(s)	68, 324, 325, 1219, 1332
AgeI	ACCGGT	1 cut(s)	21
AgsI	TTSAA	2 cut(s)	509, 663
AjiI	CACGTC	1 cut(s)	46
AjnI	CCWGG	1 cut(s)	110
AjuI	GAANNNNNNNTTGG	4 cut(s)	242, 274, 1154, 1186
AluBI	AGCT	8 cut(s)	118, 127, 135, 419, 579, 922, 1021, 1188
AluI	AGCT	8 cut(s)	118, 127, 135, 419, 579, 922, 1021, 1188
Alw21I	GWGCWC	1 cut(s)	129
Alw26I	GTCTC	7 cut(s)	44, 204, 701, 727, 731, 861, 1305
AlwI	GGATC	5 cut(s)	87, 100, 1204, 1412, 1425
Ama87I	CYCGRG	4 cut(s)	128, 207, 229, 1383
AoxI	GGCC	6 cut(s)	285, 435, 781, 1081, 1150, 1199
ApaI	GGGCCC	1 cut(s)	785
ApeKI	GCWGC	3 cut(s)	1018, 1026, 1185
ApoI	RAATTY	1 cut(s)	86
AsiGI	ACCGGT	1 cut(s)	21
AspS9I	GGNCC	4 cut(s)	19, 285, 781, 782
AsuC2I	CCSGG	4 cut(s)	63, 230, 231, 557
AsuHPI	GGTGA	1 cut(s)	1372
AsuII	TTCGAA	1 cut(s)	496
AvaI	CYCGRG	4 cut(s)	128, 207, 229, 1383
AvaII	GGWCC	1 cut(s)	19
AxyI	CCTNAGG	1 cut(s)	633
BaeGI	GKGCMC	1 cut(s)	785
BalI	TGGCCA	1 cut(s)	437
BamHI	GGATCC	2 cut(s)	92, 1417
BanI	GGYRCC	2 cut(s)	1322, 1370
BanII	GRGCYC	2 cut(s)	129, 785
BbsI	GAAGAC	1 cut(s)	1333
Bbv12I	GWGCWC	1 cut(s)	129
BbvI	GCAGC	3 cut(s)	1013, 1030, 1197
BccI	CCATC	4 cut(s)	104, 179, 427, 1142
BceAI	ACGGC	2 cut(s)	200, 214
BcgI	CGANNNNNNTGC	2 cut(s)	1136, 1170
BciT130I	CCWGG	1 cut(s)	112
BclI	TGATCA	1 cut(s)	1072
BcnI	CCSGG	4 cut(s)	63, 230, 231, 557
BcoDI	GTCTC	7 cut(s)	44, 204, 701, 727, 731, 861, 1305
BfaI	CTAG	1 cut(s)	1337
BfmI	CTRYAG	3 cut(s)	528, 1027, 1263
BfuAI	ACCTGC	2 cut(s)	361, 853
BglII	AGATCT	1 cut(s)	766
BisI	GCNGC	5 cut(s)	13, 225, 1019, 1027, 1186
BlsI	GCNGC	5 cut(s)	14, 226, 1020, 1028, 1187
BmcAI	AGTACT	1 cut(s)	513
Bme1390I	CCNGG	5 cut(s)	63, 112, 230, 231, 557
Bme18I	GGWCC	1 cut(s)	19
BmeT110I	CYCGRG	4 cut(s)	128, 207, 229, 1383
BmgBI	CACGTC	1 cut(s)	46
BmgT120I	GGNCC	4 cut(s)	19, 285, 781, 782
BmiI	GGNNCC	5 cut(s)	94, 783, 1324, 1372, 1419
BmrFI	CCNGG	5 cut(s)	63, 112, 230, 231, 557
BmsI	GCATC	3 cut(s)	1099, 1129, 1345
BpiI	GAAGAC	1 cut(s)	1333
BplI	GAGNNNNNCTC	2 cut(s)	122, 154
Bpu14I	TTCGAA	1 cut(s)	496
BpuEI	CTTGAG	1 cut(s)	755
BpuMI	CCSGG	4 cut(s)	63, 230, 231, 557
BsaHI	GRCGYC	1 cut(s)	213
BsaI	GGTCTC	1 cut(s)	701
BsaJI	CCNNGG	6 cut(s)	110, 228, 229, 271, 906, 1384
BsaWI	WCCGGW	1 cut(s)	21
BsaXI	ACNNNNNCTCC	2 cut(s)	406, 436
Bsc4I	CCNNNNNNNGG	5 cut(s)	68, 324, 325, 1219, 1332
Bse118I	RCCGGY	2 cut(s)	21, 287
Bse21I	CCTNAGG	1 cut(s)	633
Bse3DI	GCAATG	2 cut(s)	219, 1278
BseBI	CCWGG	1 cut(s)	112
BseDI	CCNNGG	6 cut(s)	110, 228, 229, 271, 906, 1384
BseGI	GGATG	5 cut(s)	96, 493, 682, 1395, 1405
BseLI	CCNNNNNNNGG	5 cut(s)	68, 324, 325, 1219, 1332
BseMI	GCAATG	2 cut(s)	219, 1278
BseMII	CTCAG	2 cut(s)	624, 696
BseRI	GAGGAG	1 cut(s)	1306
BseSI	GKGCMC	1 cut(s)	785
BseXI	GCAGC	3 cut(s)	1013, 1030, 1197
BseYI	CCCAGC	1 cut(s)	579
BsgI	GTGCAG	3 cut(s)	339, 831, 1461
Bsh1236I	CGCG	1 cut(s)	35
BshFI	GGCC	6 cut(s)	287, 437, 783, 1083, 1152, 1201
BshNI	GGYRCC	2 cut(s)	1322, 1370
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	1 cut(s)	129
BsiHKCI	CYCGRG	4 cut(s)	128, 207, 229, 1383
BsiSI	CCGG	5 cut(s)	22, 63, 230, 288, 557
BslFI	GGGAC	3 cut(s)	300, 689, 1289
BslI	CCNNNNNNNGG	5 cut(s)	68, 324, 325, 1219, 1332
BsmAI	GTCTC	7 cut(s)	44, 204, 701, 727, 731, 861, 1305
BsmBI	CGTCTC	2 cut(s)	44, 204
BsmFI	GGGAC	3 cut(s)	300, 689, 1289
BsnI	GGCC	6 cut(s)	287, 437, 783, 1083, 1152, 1201
Bso31I	GGTCTC	1 cut(s)	701
BsoBI	CYCGRG	4 cut(s)	128, 207, 229, 1383
Bsp119I	TTCGAA	1 cut(s)	496
Bsp120I	GGGCCC	1 cut(s)	781
Bsp1286I	GDGCHC	2 cut(s)	129, 785
Bsp143I	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
Bsp19I	CCATGG	2 cut(s)	271, 906
BspACI	CCGC	6 cut(s)	12, 156, 190, 225, 1045, 1213
BspANI	GGCC	6 cut(s)	287, 437, 783, 1083, 1152, 1201
BspCNI	CTCAG	2 cut(s)	625, 697
BspFNI	CGCG	1 cut(s)	35
BspLI	GGNNCC	5 cut(s)	94, 783, 1324, 1372, 1419
BspMAI	CTGCAG	2 cut(s)	1031, 1267
BspMI	ACCTGC	2 cut(s)	361, 853
BspPI	GGATC	5 cut(s)	87, 100, 1204, 1412, 1425
BspT104I	TTCGAA	1 cut(s)	496
BspT107I	GGYRCC	2 cut(s)	1322, 1370
BspTNI	GGTCTC	1 cut(s)	701
BsrBI	CCGCTC	1 cut(s)	12
BsrDI	GCAATG	2 cut(s)	219, 1278
BsrFI	RCCGGY	2 cut(s)	21, 287
BssAI	RCCGGY	2 cut(s)	21, 287
BssECI	CCNNGG	6 cut(s)	110, 228, 229, 271, 906, 1384
BssMI	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
BssNAI	GTATAC	1 cut(s)	1270
BssNI	GRCGYC	1 cut(s)	213
BssT1I	CCWWGG	2 cut(s)	271, 906
Bst1107I	GTATAC	1 cut(s)	1270
Bst2UI	CCWGG	1 cut(s)	112
Bst4CI	ACNGT	5 cut(s)	532, 742, 866, 896, 1243
BstACI	GRCGYC	1 cut(s)	213
BstBI	TTCGAA	1 cut(s)	496
BstC8I	GCNNGC	3 cut(s)	1081, 1144, 1444
BstDEI	CTNAG	3 cut(s)	633, 698, 705
BstDSI	CCRYGG	2 cut(s)	271, 906
BstF5I	GGATG	5 cut(s)	96, 493, 682, 1395, 1405
BstFNI	CGCG	1 cut(s)	35
BstKTI	GATC	9 cut(s)	33, 95, 246, 769, 817, 928, 1075, 1212, 1420
BstMAI	GTCTC	7 cut(s)	44, 204, 701, 727, 731, 861, 1305
BstMBI	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
BstMWI	GCNNNNNNNGC	5 cut(s)	124, 198, 221, 443, 1289
BstNI	CCWGG	1 cut(s)	112
BstNSI	RCATGY	1 cut(s)	1146
BstSCI	CCNGG	5 cut(s)	61, 110, 228, 229, 555
BstSFI	CTRYAG	3 cut(s)	528, 1027, 1263
BstSLI	GKGCMC	1 cut(s)	785
BstUI	CGCG	1 cut(s)	35
BstV1I	GCAGC	3 cut(s)	1013, 1030, 1197
BstV2I	GAAGAC	1 cut(s)	1333
BstX2I	RGATCY	3 cut(s)	92, 766, 1417
BstYI	RGATCY	3 cut(s)	92, 766, 1417
BstZ17I	GTATAC	1 cut(s)	1270
Bsu36I	CCTNAGG	1 cut(s)	633
BsuRI	GGCC	6 cut(s)	287, 437, 783, 1083, 1152, 1201
BtgI	CCRYGG	2 cut(s)	271, 906
BtgZI	GCGATG	1 cut(s)	1161
BtrI	CACGTC	1 cut(s)	46
BtsCI	GGATG	5 cut(s)	96, 493, 682, 1395, 1405
BtsIMutI	CAGTG	1 cut(s)	955
BveI	ACCTGC	2 cut(s)	361, 853
Cac8I	GCNNGC	3 cut(s)	1081, 1144, 1444
Cfr10I	RCCGGY	2 cut(s)	21, 287
Cfr13I	GGNCC	4 cut(s)	19, 285, 781, 782
Cfr9I	CCCGGG	1 cut(s)	229
CseI	GACGC	1 cut(s)	221
Csp6I	GTAC	2 cut(s)	372, 512
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	8 cut(s)	272, 427, 646, 778, 832, 907, 1076, 1143
CviQI	GTAC	2 cut(s)	372, 512
DdeI	CTNAG	3 cut(s)	633, 698, 705
DpnI	GATC	9 cut(s)	32, 94, 245, 768, 816, 927, 1074, 1211, 1419
DpnII	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
DrdI	GACNNNNNNGTC	1 cut(s)	745
DseDI	GACNNNNNNGTC	1 cut(s)	745
EaeI	YGGCCR	2 cut(s)	435, 1081
Ecl136II	GAGCTC	1 cut(s)	127
Eco130I	CCWWGG	2 cut(s)	271, 906
Eco147I	AGGCCT	1 cut(s)	1201
Eco24I	GRGCYC	2 cut(s)	129, 785
Eco31I	GGTCTC	1 cut(s)	701
Eco47I	GGWCC	1 cut(s)	19
Eco53kI	GAGCTC	1 cut(s)	127
Eco57I	CTGAAG	1 cut(s)	1344
Eco81I	CCTNAGG	1 cut(s)	633
Eco88I	CYCGRG	4 cut(s)	128, 207, 229, 1383
EcoICRI	GAGCTC	1 cut(s)	127
EcoRI	GAATTC	1 cut(s)	86
EcoRII	CCWGG	1 cut(s)	110
EcoT14I	CCWWGG	2 cut(s)	271, 906
EcoT22I	ATGCAT	1 cut(s)	1144
EcoT38I	GRGCYC	2 cut(s)	129, 785
ErhI	CCWWGG	2 cut(s)	271, 906
Esp3I	CGTCTC	2 cut(s)	44, 204
FaeI	CATG	8 cut(s)	275, 430, 649, 781, 835, 910, 1079, 1146
FaqI	GGGAC	3 cut(s)	300, 689, 1289
FatI	CATG	8 cut(s)	271, 426, 645, 777, 831, 906, 1075, 1142
FauI	CCCGC	1 cut(s)	163
FauNDI	CATATG	2 cut(s)	1035, 1423
FbaI	TGATCA	1 cut(s)	1072
FblI	GTMKAC	2 cut(s)	349, 1269
Fnu4HI	GCNGC	5 cut(s)	13, 225, 1019, 1027, 1186
FokI	GGATG	5 cut(s)	83, 500, 669, 1402, 1412
FriOI	GRGCYC	2 cut(s)	129, 785
Fsp4HI	GCNGC	5 cut(s)	13, 225, 1019, 1027, 1186
FspBI	CTAG	1 cut(s)	1337
GluI	GCNGC	5 cut(s)	13, 225, 1019, 1027, 1186
GsaI	CCCAGC	1 cut(s)	583
HaeIII	GGCC	6 cut(s)	287, 437, 783, 1083, 1152, 1201
HapII	CCGG	5 cut(s)	22, 63, 230, 288, 557
HgaI	GACGC	1 cut(s)	221
Hin1I	GRCGYC	1 cut(s)	213
Hin1II	CATG	8 cut(s)	275, 430, 649, 781, 835, 910, 1079, 1146
HincII	GTYRAC	2 cut(s)	350, 396
HindII	GTYRAC	2 cut(s)	350, 396
HpaII	CCGG	5 cut(s)	22, 63, 230, 288, 557
HphI	GGTGA	1 cut(s)	1372
Hpy166II	GTNNAC	4 cut(s)	350, 396, 1270, 1380
Hpy188I	TCNGA	6 cut(s)	9, 92, 152, 775, 1192, 1363
Hpy188III	TCNNGA	7 cut(s)	28, 130, 326, 506, 632, 1136, 1179
Hpy8I	GTNNAC	4 cut(s)	350, 396, 1270, 1380
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	1 cut(s)	405
HpyCH4III	ACNGT	5 cut(s)	532, 742, 866, 896, 1243
HpyCH4IV	ACGT	2 cut(s)	45, 277
HpyF10VI	GCNNNNNNNGC	5 cut(s)	124, 198, 221, 443, 1289
HpyF3I	CTNAG	3 cut(s)	633, 698, 705
HpySE526I	ACGT	2 cut(s)	45, 277
Hsp92I	GRCGYC	1 cut(s)	213
Hsp92II	CATG	8 cut(s)	275, 430, 649, 781, 835, 910, 1079, 1146
Ksp22I	TGATCA	1 cut(s)	1072
Kzo9I	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
LmnI	GCTCC	1 cut(s)	9
Lsp1109I	GCAGC	3 cut(s)	1013, 1030, 1197
LweI	GCATC	3 cut(s)	1099, 1129, 1345
MaeI	CTAG	1 cut(s)	1337
MaeII	ACGT	2 cut(s)	45, 277
MaeIII	GTNAC	4 cut(s)	194, 422, 883, 1009
MalI	GATC	9 cut(s)	32, 94, 245, 768, 816, 927, 1074, 1211, 1419
MbiI	CCGCTC	1 cut(s)	12
MboI	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
MboII	GAAGA	5 cut(s)	31, 442, 814, 1333, 1399
MfeI	CAATTG	2 cut(s)	375, 1483
MflI	RGATCY	3 cut(s)	92, 766, 1417
MhlI	GDGCHC	2 cut(s)	129, 785
MlsI	TGGCCA	1 cut(s)	437
MluCI	AATT	8 cut(s)	86, 166, 375, 727, 1040, 1121, 1350, 1483
MluNI	TGGCCA	1 cut(s)	437
MlyI	GAGTC	8 cut(s)	13, 391, 554, 755, 863, 988, 1169, 1307
MmeI	TCCRAC	1 cut(s)	175
Mox20I	TGGCCA	1 cut(s)	437
Mph1103I	ATGCAT	1 cut(s)	1144
MscI	TGGCCA	1 cut(s)	437
MseI	TTAA	1 cut(s)	566
MslI	CAYNNNNRTG	3 cut(s)	431, 830, 1005
Msp20I	TGGCCA	1 cut(s)	437
MspA1I	CMGCKG	2 cut(s)	192, 579
MspI	CCGG	5 cut(s)	22, 63, 230, 288, 557
MspR9I	CCNGG	5 cut(s)	63, 112, 230, 231, 557
MunI	CAATTG	2 cut(s)	375, 1483
MvaI	CCWGG	1 cut(s)	112
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	5 cut(s)	124, 198, 221, 443, 1289
NciI	CCSGG	4 cut(s)	63, 230, 231, 557
NcoI	CCATGG	2 cut(s)	271, 906
NdeI	CATATG	2 cut(s)	1035, 1423
NdeII	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
NlaIII	CATG	8 cut(s)	275, 430, 649, 781, 835, 910, 1079, 1146
NlaIV	GGNNCC	5 cut(s)	94, 783, 1324, 1372, 1419
NmuCI	GTSAC	2 cut(s)	883, 1009
NsiI	ATGCAT	1 cut(s)	1144
NspI	RCATGY	1 cut(s)	1146
NspV	TTCGAA	1 cut(s)	496
PaeI	GCATGC	1 cut(s)	1146
PaeR7I	CTCGAG	1 cut(s)	128
PaqCI	CACCTGC	1 cut(s)	853
PceI	AGGCCT	1 cut(s)	1201
PcsI	WCGNNNNNNNCGW	1 cut(s)	39
PfeI	GAWTC	4 cut(s)	322, 380, 502, 1053
PflFI	GACNNNGTC	2 cut(s)	63, 215
PfoI	TCCNGGA	1 cut(s)	555
PinAI	ACCGGT	1 cut(s)	21
PkrI	GCNGC	5 cut(s)	14, 226, 1020, 1028, 1187
PleI	GAGTC	8 cut(s)	12, 391, 553, 754, 862, 987, 1169, 1307
PpsI	GAGTC	8 cut(s)	12, 391, 553, 754, 862, 987, 1169, 1307
Psp124BI	GAGCTC	1 cut(s)	129
Psp6I	CCWGG	1 cut(s)	110
PspFI	CCCAGC	1 cut(s)	579
PspGI	CCWGG	1 cut(s)	110
PspN4I	GGNNCC	5 cut(s)	94, 783, 1324, 1372, 1419
PspOMI	GGGCCC	1 cut(s)	781
PspPI	GGNCC	4 cut(s)	19, 285, 781, 782
PstI	CTGCAG	2 cut(s)	1031, 1267
PsuI	RGATCY	3 cut(s)	92, 766, 1417
PsyI	GACNNNGTC	2 cut(s)	63, 215
PvuII	CAGCTG	1 cut(s)	579
RsaI	GTAC	2 cut(s)	373, 513
RsaNI	GTAC	2 cut(s)	372, 512
RseI	CAYNNNNRTG	3 cut(s)	431, 830, 1005
SacI	GAGCTC	1 cut(s)	129
SalI	GTCGAC	1 cut(s)	348
SaqAI	TTAA	1 cut(s)	566
SatI	GCNGC	5 cut(s)	13, 225, 1019, 1027, 1186
Sau3AI	GATC	9 cut(s)	30, 92, 243, 766, 814, 925, 1072, 1209, 1417
Sau96I	GGNCC	4 cut(s)	19, 285, 781, 782
ScaI	AGTACT	1 cut(s)	513
SchI	GAGTC	8 cut(s)	13, 391, 554, 755, 863, 988, 1169, 1307
ScrFI	CCNGG	5 cut(s)	63, 112, 230, 231, 557
SduI	GDGCHC	2 cut(s)	129, 785
SfaNI	GCATC	3 cut(s)	1099, 1129, 1345
SfcI	CTRYAG	3 cut(s)	528, 1027, 1263
Sfr274I	CTCGAG	1 cut(s)	128
SfuI	TTCGAA	1 cut(s)	496
SinI	GGWCC	1 cut(s)	19
SlaI	CTCGAG	1 cut(s)	128
SmaI	CCCGGG	1 cut(s)	231
SmiMI	CAYNNNNRTG	3 cut(s)	431, 830, 1005
SmlI	CTYRAG	2 cut(s)	128, 734
SmoI	CTYRAG	2 cut(s)	128, 734
SphI	GCATGC	1 cut(s)	1146
Sse9I	AATT	8 cut(s)	86, 166, 375, 727, 1040, 1121, 1350, 1483
SseBI	AGGCCT	1 cut(s)	1201
SsiI	CCGC	6 cut(s)	12, 156, 190, 225, 1045, 1213
SspI	AATATT	4 cut(s)	343, 521, 658, 1099
SspMI	CTAG	1 cut(s)	1337
SstI	GAGCTC	1 cut(s)	129
StuI	AGGCCT	1 cut(s)	1201
StyD4I	CCNGG	5 cut(s)	61, 110, 228, 229, 555
StyI	CCWWGG	2 cut(s)	271, 906
TaaI	ACNGT	5 cut(s)	532, 742, 866, 896, 1243
TaiI	ACGT	2 cut(s)	48, 280
TasI	AATT	8 cut(s)	86, 166, 375, 727, 1040, 1121, 1350, 1483
TatI	WGTACW	1 cut(s)	511
TauI	GCSGC	2 cut(s)	15, 227
TfiI	GAWTC	4 cut(s)	322, 380, 502, 1053
Tru1I	TTAA	1 cut(s)	566
Tru9I	TTAA	1 cut(s)	566
TscAI	CASTG	1 cut(s)	955
TseFI	GTSAC	2 cut(s)	883, 1009
TseI	GCWGC	3 cut(s)	1018, 1026, 1185
Tsp45I	GTSAC	2 cut(s)	883, 1009
TspDTI	ATGAA	7 cut(s)	443, 515, 662, 810, 925, 1052, 1466
TspGWI	ACGGA	1 cut(s)	175
TspMI	CCCGGG	1 cut(s)	229
TspRI	CASTG	1 cut(s)	955
Tth111I	GACNNNGTC	2 cut(s)	63, 215
VpaK11BI	GGWCC	1 cut(s)	19
XapI	RAATTY	1 cut(s)	86
XceI	RCATGY	1 cut(s)	1146
XhoI	CTCGAG	1 cut(s)	128
XmaI	CCCGGG	1 cut(s)	229
XmiI	GTMKAC	2 cut(s)	349, 1269
XspI	CTAG	1 cut(s)	1337
ZrmI	AGTACT	1 cut(s)	513
Zsp2I	ATGCAT	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.