Rh7BG445200

Phosphate-induced protein 1 conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002144
Physical Location & Seq
Reverse (-)
51917728 .. 51919153
1426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG445200.1

Sequence Viewer

Length: 924 bp
ATGGCTTATAATTACCATTTGGCCATCTGGGTCTTCTTCCTCCTCGCACTCTCGACCTTCCTCAGCCCTAGTGCAGCCACACCTCGAAAGCTCTCGGCCCTCGTCCAACAACAACCTCTGGTCCTCAAGTACCACAAGGGCCCACTTCTCCATGGCAACGTCACCGTAAACCTCGTATGGTACGGTAAATTCTCCCCCAATCAACGGTCAATTCTCGTTGACTTTCTTCAGTCTCTGAGCTCCGGCCACCGCTCTCCACAGCCCTCGGTCTCGTCGTGGTGGCAGACCATTGCGGGGTACACGGGCGGCCCATGCACCGTCGCTGTAGGGAATCAAATCCTCCAGCAGAGCTACTCTCTCGGCAAAACACTCACGAACCAAAAGCTCGCGGTTCTGGCGGCGAAAGGATCAAAGGGCGGTCGTAAAACGGCGGCTGTCAACGTCGTTTTGACTGACGCTGACGTGGCGGTGGAGGGGTTCTGCATGAGCCGGTGCGGGAGTCACGGGTCGAGTCGGGGCGGGTCGGCGTACGCGTGGGTGGGGAACCCGGGGAAGCAGTGCCCAGGCCAGTGCGCGTGGCCGTTTCACCAGCCGATTTACGGGCCGCAGACTCCACCGTTAGTTTCGCCAAACGGCGACGTGGGGATAGATGGAATGGTGATCAATCTGGCTACGGTTTTGGCGGGAACGGTGACGAATCCGTTTGATAACGGGTACTTCCAGGGAGCGGCAGGCGCGGGTTTGGAGGCGGTGAGCGCGTGCACGGGTATTTTCGGGAAAGGGGCGTACCCGGGTTATCCGGGGGAGGTCGTTTTGGACAAAACGACGGGAGCGAGTTACAATGCGGTTGGAGTACGTGGACGGAAGTATCTGCTTCCCTCGATGTGGGACCCGAAGACATCCGCGTGTAAAACACTCGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Phi_1

Protein Analysis

307

Amino Acids

32.36

Weight (kDa)

9.43

Isoelectric Point (pI)

34.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phi_1 PF04674 42 - 306 8.1e-119 Phosphate-induced protein 1 conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 9
AccBSI CCGCTC 2 cut(s) 252, 728
AccII CGCG 6 cut(s) 389, 533, 575, 737, 758, 905
AclWI GGATC 1 cut(s) 415
AcoI YGGCCR 3 cut(s) 21, 244, 578
AcsI RAATTY 1 cut(s) 188
AcuI CTGAAG 1 cut(s) 212
AfaI GTAC 7 cut(s) 131, 182, 299, 530, 716, 788, 855
AfiI CCNNNNNNNGG 5 cut(s) 204, 294, 599, 727, 885
AflIII ACRYGT 1 cut(s) 531
AjiI CACGTC 2 cut(s) 463, 640
AjnI CCWGG 2 cut(s) 562, 720
AluBI AGCT 4 cut(s) 91, 240, 351, 385
AluI AGCT 4 cut(s) 91, 240, 351, 385
Alw21I GWGCWC 2 cut(s) 242, 764
Alw26I GTCTC 2 cut(s) 237, 274
Alw44I GTGCAC 1 cut(s) 760
AlwI GGATC 1 cut(s) 415
AlwNI CAGNNNCTG 1 cut(s) 235
Ama87I CYCGRG 2 cut(s) 547, 790
AoxI GGCC 8 cut(s) 21, 96, 139, 244, 307, 565, 578, 602
ApaI GGGCCC 1 cut(s) 143
ApaLI GTGCAC 1 cut(s) 760
ApeKI GCWGC 1 cut(s) 74
ApoI RAATTY 1 cut(s) 188
AspLEI GCGC 3 cut(s) 575, 737, 758
AspS9I GGNCC 7 cut(s) 97, 121, 139, 140, 308, 602, 889
AsuC2I CCSGG 5 cut(s) 548, 549, 791, 792, 801
AsuHPI GGTGA 5 cut(s) 154, 578, 670, 703, 763
AvaI CYCGRG 2 cut(s) 547, 790
AvaII GGWCC 2 cut(s) 121, 889
BaeGI GKGCMC 3 cut(s) 143, 563, 764
BaeI ACNNNNGTAYC 2 cut(s) 851, 884
BalI TGGCCA 1 cut(s) 23
BanII GRGCYC 2 cut(s) 143, 242
BbsI GAAGAC 2 cut(s) 25, 902
Bbv12I GWGCWC 2 cut(s) 242, 764
BbvCI CCTCAGC 1 cut(s) 62
BbvI GCAGC 1 cut(s) 86
BccI CCATC 2 cut(s) 32, 644
BceAI ACGGC 3 cut(s) 444, 565, 649
BciT130I CCWGG 2 cut(s) 564, 722
BclI TGATCA 1 cut(s) 660
BcnI CCSGG 5 cut(s) 548, 549, 791, 792, 801
BcoDI GTCTC 2 cut(s) 237, 274
BfaI CTAG 1 cut(s) 69
BfmI CTRYAG 1 cut(s) 324
BisI GCNGC 6 cut(s) 75, 307, 399, 432, 605, 729
BlsI GCNGC 6 cut(s) 76, 308, 400, 433, 606, 730
Bme1390I CCNGG 7 cut(s) 548, 549, 564, 722, 791, 792, 801
Bme18I GGWCC 2 cut(s) 121, 889
BmeT110I CYCGRG 2 cut(s) 547, 790
BmgBI CACGTC 2 cut(s) 463, 640
BmgT120I GGNCC 7 cut(s) 97, 121, 139, 140, 308, 602, 889
BmiI GGNNCC 4 cut(s) 141, 545, 890, 891
BmrFI CCNGG 7 cut(s) 548, 549, 564, 722, 791, 792, 801
BpiI GAAGAC 2 cut(s) 25, 902
BplI GAGNNNNNCTC 2 cut(s) 340, 372
BpmI CTGGAG 1 cut(s) 326
Bpu10I CCTNAGC 1 cut(s) 62
BpuEI CTTGAG 1 cut(s) 110
BpuMI CCSGG 5 cut(s) 548, 549, 791, 792, 801
BsaAI YACGTR 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 274
BsaJI CCNNGG 8 cut(s) 151, 264, 547, 548, 562, 721, 790, 800
Bsc4I CCNNNNNNNGG 5 cut(s) 204, 294, 599, 727, 885
Bse118I RCCGGY 1 cut(s) 489
Bse1I ACTGG 1 cut(s) 568
Bse3DI GCAATG 1 cut(s) 288
BseBI CCWGG 2 cut(s) 564, 722
BseDI CCNNGG 8 cut(s) 151, 264, 547, 548, 562, 721, 790, 800
BseGI GGATG 1 cut(s) 899
BseLI CCNNNNNNNGG 5 cut(s) 204, 294, 599, 727, 885
BseMI GCAATG 1 cut(s) 288
BseMII CTCAG 2 cut(s) 76, 227
BseNI ACTGG 1 cut(s) 568
BseRI GAGGAG 1 cut(s) 32
BseSI GKGCMC 3 cut(s) 143, 563, 764
BseXI GCAGC 1 cut(s) 86
BsgI GTGCAG 1 cut(s) 93
Bsh1236I CGCG 6 cut(s) 389, 533, 575, 737, 758, 905
Bsh1285I CGRYCG 1 cut(s) 421
BshFI GGCC 8 cut(s) 23, 98, 141, 246, 309, 567, 580, 604
BsiEI CGRYCG 1 cut(s) 421
BsiHKAI GWGCWC 2 cut(s) 242, 764
BsiHKCI CYCGRG 2 cut(s) 547, 790
BsiSI CCGG 5 cut(s) 243, 490, 548, 791, 800
BsiWI CGTACG 1 cut(s) 528
BslFI GGGAC 1 cut(s) 902
BslI CCNNNNNNNGG 5 cut(s) 204, 294, 599, 727, 885
BsmAI GTCTC 2 cut(s) 237, 274
BsmFI GGGAC 1 cut(s) 902
BsnI GGCC 8 cut(s) 23, 98, 141, 246, 309, 567, 580, 604
Bso31I GGTCTC 1 cut(s) 274
BsoBI CYCGRG 2 cut(s) 547, 790
Bsp120I GGGCCC 1 cut(s) 139
Bsp1286I GDGCHC 4 cut(s) 143, 242, 563, 764
Bsp143I GATC 2 cut(s) 407, 660
Bsp19I CCATGG 1 cut(s) 151
BspANI GGCC 8 cut(s) 23, 98, 141, 246, 309, 567, 580, 604
BspCNI CTCAG 2 cut(s) 75, 228
BspFNI CGCG 6 cut(s) 389, 533, 575, 737, 758, 905
BspLI GGNNCC 4 cut(s) 141, 545, 890, 891
BspPI GGATC 1 cut(s) 415
BspTNI GGTCTC 1 cut(s) 274
BsrBI CCGCTC 2 cut(s) 252, 728
BsrDI GCAATG 1 cut(s) 288
BsrFI RCCGGY 1 cut(s) 489
BsrI ACTGG 1 cut(s) 568
BssAI RCCGGY 1 cut(s) 489
BssECI CCNNGG 8 cut(s) 151, 264, 547, 548, 562, 721, 790, 800
BssMI GATC 2 cut(s) 407, 660
BssT1I CCWWGG 1 cut(s) 151
Bst2UI CCWGG 2 cut(s) 564, 722
Bst4CI ACNGT 7 cut(s) 166, 185, 207, 319, 618, 676, 691
BstBAI YACGTR 1 cut(s) 857
BstC8I GCNNGC 3 cut(s) 387, 733, 760
BstDEI CTNAG 2 cut(s) 62, 236
BstDSI CCRYGG 1 cut(s) 151
BstF5I GGATG 1 cut(s) 899
BstFNI CGCG 6 cut(s) 389, 533, 575, 737, 758, 905
BstHHI GCGC 3 cut(s) 575, 737, 758
BstKTI GATC 2 cut(s) 410, 663
BstMAI GTCTC 2 cut(s) 237, 274
BstMBI GATC 2 cut(s) 407, 660
BstMCI CGRYCG 1 cut(s) 421
BstMWI GCNNNNNNNGC 5 cut(s) 312, 395, 464, 734, 755
BstNI CCWGG 2 cut(s) 564, 722
BstSCI CCNGG 7 cut(s) 546, 547, 562, 720, 789, 790, 799
BstSFI CTRYAG 1 cut(s) 324
BstSLI GKGCMC 3 cut(s) 143, 563, 764
BstUI CGCG 6 cut(s) 389, 533, 575, 737, 758, 905
BstV1I GCAGC 1 cut(s) 86
BstV2I GAAGAC 2 cut(s) 25, 902
BsuRI GGCC 8 cut(s) 23, 98, 141, 246, 309, 567, 580, 604
BtgI CCRYGG 1 cut(s) 151
BtrI CACGTC 2 cut(s) 463, 640
BtsCI GGATG 1 cut(s) 899
BtsI GCAGTG 1 cut(s) 563
BtsIMutI CAGTG 2 cut(s) 563, 575
Cac8I GCNNGC 3 cut(s) 387, 733, 760
CaiI CAGNNNCTG 1 cut(s) 235
CfoI GCGC 3 cut(s) 575, 737, 758
Cfr10I RCCGGY 1 cut(s) 489
Cfr13I GGNCC 7 cut(s) 97, 121, 139, 140, 308, 602, 889
Cfr9I CCCGGG 2 cut(s) 547, 790
CseI GACGC 1 cut(s) 464
Csp6I GTAC 7 cut(s) 130, 181, 298, 529, 715, 787, 854
CviAII CATG 3 cut(s) 152, 312, 484
CviQI GTAC 7 cut(s) 130, 181, 298, 529, 715, 787, 854
DdeI CTNAG 2 cut(s) 62, 236
DpnI GATC 2 cut(s) 409, 662
DpnII GATC 2 cut(s) 407, 660
EaeI YGGCCR 3 cut(s) 21, 244, 578
Ecl136II GAGCTC 1 cut(s) 240
Eco130I CCWWGG 1 cut(s) 151
Eco24I GRGCYC 2 cut(s) 143, 242
Eco31I GGTCTC 1 cut(s) 274
Eco47I GGWCC 2 cut(s) 121, 889
Eco53kI GAGCTC 1 cut(s) 240
Eco57I CTGAAG 1 cut(s) 212
Eco88I CYCGRG 2 cut(s) 547, 790
EcoICRI GAGCTC 1 cut(s) 240
EcoO109I RGGNCCY 2 cut(s) 139, 889
EcoRII CCWGG 2 cut(s) 562, 720
EcoT14I CCWWGG 1 cut(s) 151
EcoT38I GRGCYC 2 cut(s) 143, 242
ErhI CCWWGG 1 cut(s) 151
FaeI CATG 3 cut(s) 155, 315, 487
FaiI YATR 5 cut(s) 9, 153, 178, 313, 485
FaqI GGGAC 1 cut(s) 902
FatI CATG 3 cut(s) 151, 311, 483
FauI CCCGC 5 cut(s) 286, 488, 512, 676, 730
FbaI TGATCA 1 cut(s) 660
Fnu4HI GCNGC 6 cut(s) 75, 307, 399, 432, 605, 729
FokI GGATG 1 cut(s) 886
FriOI GRGCYC 2 cut(s) 143, 242
Fsp4HI GCNGC 6 cut(s) 75, 307, 399, 432, 605, 729
FspBI CTAG 1 cut(s) 69
GlaI GCGC 3 cut(s) 574, 736, 757
GluI GCNGC 6 cut(s) 75, 307, 399, 432, 605, 729
GsuI CTGGAG 1 cut(s) 326
HaeIII GGCC 8 cut(s) 23, 98, 141, 246, 309, 567, 580, 604
HapII CCGG 5 cut(s) 243, 490, 548, 791, 800
HgaI GACGC 1 cut(s) 464
HhaI GCGC 3 cut(s) 575, 737, 758
Hin1II CATG 3 cut(s) 155, 315, 487
Hin6I GCGC 3 cut(s) 573, 735, 756
HinP1I GCGC 3 cut(s) 573, 735, 756
HincII GTYRAC 2 cut(s) 220, 439
HindII GTYRAC 2 cut(s) 220, 439
HinfI GANTC 5 cut(s) 331, 499, 511, 610, 697
HpaII CCGG 5 cut(s) 243, 490, 548, 791, 800
HphI GGTGA 5 cut(s) 154, 578, 670, 703, 763
Hpy166II GTNNAC 6 cut(s) 169, 220, 300, 439, 762, 860
Hpy188I TCNGA 2 cut(s) 237, 923
Hpy188III TCNNGA 3 cut(s) 52, 373, 775
Hpy8I GTNNAC 6 cut(s) 169, 220, 300, 439, 762, 860
Hpy99I CGWCG 5 cut(s) 277, 323, 446, 641, 829
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 7 cut(s) 166, 185, 207, 319, 618, 676, 691
HpyCH4IV ACGT 5 cut(s) 159, 441, 462, 639, 856
HpyCH4V TGCA 4 cut(s) 74, 315, 483, 762
HpyF10VI GCNNNNNNNGC 5 cut(s) 312, 395, 464, 734, 755
HpyF3I CTNAG 2 cut(s) 62, 236
HpySE526I ACGT 5 cut(s) 159, 441, 462, 639, 856
Hsp92II CATG 3 cut(s) 155, 315, 487
HspAI GCGC 3 cut(s) 573, 735, 756
KflI GGGWCCC 1 cut(s) 889
Ksp22I TGATCA 1 cut(s) 660
Kzo9I GATC 2 cut(s) 407, 660
LmnI GCTCC 3 cut(s) 245, 725, 830
Lsp1109I GCAGC 1 cut(s) 86
MaeI CTAG 1 cut(s) 69
MaeII ACGT 5 cut(s) 159, 441, 462, 639, 856
MaeIII GTNAC 4 cut(s) 160, 500, 691, 836
MalI GATC 2 cut(s) 409, 662
MbiI CCGCTC 2 cut(s) 252, 728
MboI GATC 2 cut(s) 407, 660
MboII GAAGA 4 cut(s) 25, 28, 218, 907
MhlI GDGCHC 4 cut(s) 143, 242, 563, 764
MlsI TGGCCA 1 cut(s) 23
MluCI AATT 3 cut(s) 10, 188, 210
MluI ACGCGT 1 cut(s) 531
MluNI TGGCCA 1 cut(s) 23
MlyI GAGTC 3 cut(s) 508, 520, 604
MmeI TCCRAC 2 cut(s) 130, 829
Mox20I TGGCCA 1 cut(s) 23
MscI TGGCCA 1 cut(s) 23
MslI CAYNNNNRTG 1 cut(s) 904
Msp20I TGGCCA 1 cut(s) 23
MspI CCGG 5 cut(s) 243, 490, 548, 791, 800
MspR9I CCNGG 7 cut(s) 548, 549, 564, 722, 791, 792, 801
MvaI CCWGG 2 cut(s) 564, 722
MvnI CGCG 6 cut(s) 389, 533, 575, 737, 758, 905
MwoI GCNNNNNNNGC 5 cut(s) 312, 395, 464, 734, 755
NciI CCSGG 5 cut(s) 548, 549, 791, 792, 801
NcoI CCATGG 1 cut(s) 151
NdeII GATC 2 cut(s) 407, 660
NlaIII CATG 3 cut(s) 155, 315, 487
NlaIV GGNNCC 4 cut(s) 141, 545, 890, 891
NmeAIII GCCGAG 2 cut(s) 74, 339
NmuCI GTSAC 3 cut(s) 160, 500, 691
PcsI WCGNNNNNNNCGW 3 cut(s) 272, 530, 830
PfeI GAWTC 2 cut(s) 331, 697
Pfl23II CGTACG 1 cut(s) 528
PkrI GCNGC 6 cut(s) 76, 308, 400, 433, 606, 730
PleI GAGTC 3 cut(s) 507, 519, 604
PpsI GAGTC 3 cut(s) 507, 519, 604
Ppu21I YACGTR 1 cut(s) 857
PpuMI RGGWCCY 1 cut(s) 889
PsiI TTATAA 1 cut(s) 9
Psp124BI GAGCTC 1 cut(s) 242
Psp5II RGGWCCY 1 cut(s) 889
Psp6I CCWGG 2 cut(s) 562, 720
PspGI CCWGG 2 cut(s) 562, 720
PspLI CGTACG 1 cut(s) 528
PspN4I GGNNCC 4 cut(s) 141, 545, 890, 891
PspOMI GGGCCC 1 cut(s) 139
PspPI GGNCC 7 cut(s) 97, 121, 139, 140, 308, 602, 889
PspPPI RGGWCCY 1 cut(s) 889
PstNI CAGNNNCTG 1 cut(s) 235
RsaI GTAC 7 cut(s) 131, 182, 299, 530, 716, 788, 855
RsaNI GTAC 7 cut(s) 130, 181, 298, 529, 715, 787, 854
RseI CAYNNNNRTG 1 cut(s) 904
SacI GAGCTC 1 cut(s) 242
SatI GCNGC 6 cut(s) 75, 307, 399, 432, 605, 729
Sau3AI GATC 2 cut(s) 407, 660
Sau96I GGNCC 7 cut(s) 97, 121, 139, 140, 308, 602, 889
SchI GAGTC 3 cut(s) 508, 520, 604
ScrFI CCNGG 7 cut(s) 548, 549, 564, 722, 791, 792, 801
SduI GDGCHC 4 cut(s) 143, 242, 563, 764
SfcI CTRYAG 1 cut(s) 324
SinI GGWCC 2 cut(s) 121, 889
SmaI CCCGGG 2 cut(s) 549, 792
SmiMI CAYNNNNRTG 1 cut(s) 904
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 3 cut(s) 10, 188, 210
SspMI CTAG 1 cut(s) 69
SstI GAGCTC 1 cut(s) 242
StyD4I CCNGG 7 cut(s) 546, 547, 562, 720, 789, 790, 799
StyI CCWWGG 1 cut(s) 151
TaaI ACNGT 7 cut(s) 166, 185, 207, 319, 618, 676, 691
TaiI ACGT 5 cut(s) 162, 444, 465, 642, 859
TaqI TCGA 4 cut(s) 53, 85, 509, 881
TaqII GACCGA 1 cut(s) 256
TasI AATT 3 cut(s) 10, 188, 210
TauI GCSGC 5 cut(s) 309, 401, 434, 607, 731
TfiI GAWTC 2 cut(s) 331, 697
TscAI CASTG 2 cut(s) 563, 575
TseFI GTSAC 3 cut(s) 160, 500, 691
TseI GCWGC 1 cut(s) 74
Tsp45I GTSAC 3 cut(s) 160, 500, 691
TspGWI ACGGA 2 cut(s) 690, 877
TspMI CCCGGG 2 cut(s) 547, 790
TspRI CASTG 2 cut(s) 563, 575
VneI GTGCAC 1 cut(s) 760
VpaK11BI GGWCC 2 cut(s) 121, 889
XapI RAATTY 1 cut(s) 188
XmaI CCCGGG 2 cut(s) 547, 790
XspI CTAG 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.