Acyclic terpene utilisation family protein AtuA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01770 |
| fragaria_vesca | FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 |
| malus_domestica | MD01G1054400.v1.1 MD10G1234500.v1.1 |
| prunus_persica | Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 |
| pyrus_communis | pycom01g07960 pycom06g04950 pycom07g13860 pycom07g13870 |
| rosa_chinensis | RchiOBHm_Chr1g0354021 RchiOBHm_Chr1g0354041 |
| rosa_laevigata | RLG00000028232 RLG00000028235 |
| rosa_multiflora | Rmu_sc0004632.1_g000002 Rmu_sc0004632.1_g000004 Rmu_sc0025756.1_g000001 Rmu_sc0031149.1_g000001 Rmu_sc0031810.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00301280 Rroxscaffold_4G00301310 Rroxscaffold_4G00301330 |
| rosa_rugosa | Rorug01G0240300 Rorug01G0240500 |
| rosa_samantha | Rh1AG251600 Rh1BG223200 Rh1BG223400 Rh1CG236000 Rh1DG250100 Rh1DG250300 |
| rosa_wichuraiana | Rw1G021940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 652, 1307 |
| AciI | CCGC | 9 cut(s) | 111, 128, 231, 447, 561, 660, 994, 1256, 1616 |
| AclWI | GGATC | 4 cut(s) | 326, 442, 1540, 1844 |
| AcoI | YGGCCR | 2 cut(s) | 643, 1537 |
| AcsI | RAATTY | 1 cut(s) | 810 |
| AcuI | CTGAAG | 5 cut(s) | 128, 1062, 1265, 1382, 1398 |
| AfaI | GTAC | 6 cut(s) | 472, 521, 826, 939, 1324, 1797 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 652, 1307 |
| AgsI | TTSAA | 8 cut(s) | 155, 422, 506, 546, 797, 1168, 1352, 1769 |
| AjnI | CCWGG | 5 cut(s) | 510, 694, 732, 1117, 1829 |
| AleI | CACNNNNGTG | 1 cut(s) | 974 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1242, 1274 |
| AluBI | AGCT | 8 cut(s) | 160, 494, 619, 626, 670, 1076, 1164, 1304 |
| AluI | AGCT | 8 cut(s) | 160, 494, 619, 626, 670, 1076, 1164, 1304 |
| Alw26I | GTCTC | 5 cut(s) | 71, 239, 386, 705, 1418 |
| AlwI | GGATC | 4 cut(s) | 326, 442, 1540, 1844 |
| Ama87I | CYCGRG | 2 cut(s) | 359, 430 |
| AoxI | GGCC | 3 cut(s) | 119, 643, 1537 |
| ApeKI | GCWGC | 2 cut(s) | 491, 619 |
| ApoI | RAATTY | 1 cut(s) | 810 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1054, 1113, 1344, 1773 |
| AspLEI | GCGC | 1 cut(s) | 833 |
| AspS9I | GGNCC | 2 cut(s) | 1258, 1298 |
| AsuC2I | CCSGG | 1 cut(s) | 1574 |
| AsuHPI | GGTGA | 3 cut(s) | 376, 383, 710 |
| AsuNHI | GCTAGC | 1 cut(s) | 622 |
| AvaI | CYCGRG | 2 cut(s) | 359, 430 |
| AvaII | GGWCC | 2 cut(s) | 1258, 1298 |
| AxyI | CCTNAGG | 1 cut(s) | 1467 |
| BalI | TGGCCA | 2 cut(s) | 645, 1539 |
| BanII | GRGCYC | 1 cut(s) | 346 |
| BauI | CACGAG | 1 cut(s) | 249 |
| BbvI | GCAGC | 2 cut(s) | 503, 606 |
| BccI | CCATC | 8 cut(s) | 204, 764, 967, 1096, 1223, 1330, 1540, 1805 |
| BceAI | ACGGC | 2 cut(s) | 1198, 1353 |
| BciT130I | CCWGG | 5 cut(s) | 512, 696, 734, 1119, 1831 |
| BciVI | GTATCC | 1 cut(s) | 674 |
| BclI | TGATCA | 1 cut(s) | 700 |
| BcnI | CCSGG | 1 cut(s) | 1574 |
| BcoDI | GTCTC | 5 cut(s) | 71, 239, 386, 705, 1418 |
| BfaI | CTAG | 4 cut(s) | 474, 593, 623, 864 |
| BfmI | CTRYAG | 1 cut(s) | 462 |
| BfuI | GTATCC | 1 cut(s) | 674 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1578 |
| BglII | AGATCT | 1 cut(s) | 1864 |
| BisI | GCNGC | 5 cut(s) | 112, 129, 492, 561, 620 |
| BlpI | GCTNAGC | 1 cut(s) | 184 |
| BlsI | GCNGC | 5 cut(s) | 113, 130, 493, 562, 621 |
| BmcAI | AGTACT | 1 cut(s) | 826 |
| Bme1390I | CCNGG | 6 cut(s) | 512, 696, 734, 1119, 1574, 1831 |
| Bme18I | GGWCC | 2 cut(s) | 1258, 1298 |
| BmeT110I | CYCGRG | 2 cut(s) | 359, 430 |
| BmgT120I | GGNCC | 2 cut(s) | 1258, 1298 |
| BmrFI | CCNGG | 6 cut(s) | 512, 696, 734, 1119, 1574, 1831 |
| BmsI | GCATC | 5 cut(s) | 233, 255, 547, 700, 1711 |
| BmtI | GCTAGC | 1 cut(s) | 626 |
| BpmI | CTGGAG | 4 cut(s) | 533, 674, 716, 1428 |
| Bpu10I | CCTNAGC | 1 cut(s) | 627 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 184 |
| BpuEI | CTTGAG | 2 cut(s) | 70, 197 |
| BpuMI | CCSGG | 1 cut(s) | 1574 |
| Bsa29I | ATCGAT | 2 cut(s) | 208, 894 |
| BsaAI | YACGTR | 1 cut(s) | 1223 |
| BsaI | GGTCTC | 3 cut(s) | 239, 386, 1418 |
| BsaJI | CCNNGG | 1 cut(s) | 393 |
| BsaWI | WCCGGW | 1 cut(s) | 1325 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 652, 1307 |
| Bse118I | RCCGGY | 1 cut(s) | 368 |
| Bse1I | ACTGG | 5 cut(s) | 129, 679, 822, 1261, 1396 |
| Bse21I | CCTNAGG | 1 cut(s) | 1467 |
| BseBI | CCWGG | 5 cut(s) | 512, 696, 734, 1119, 1831 |
| BseCI | ATCGAT | 2 cut(s) | 208, 894 |
| BseDI | CCNNGG | 1 cut(s) | 393 |
| BseGI | GGATG | 7 cut(s) | 98, 270, 691, 1107, 1234, 1726, 1741 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 652, 1307 |
| BseMII | CTCAG | 4 cut(s) | 359, 641, 972, 1875 |
| BseNI | ACTGG | 5 cut(s) | 129, 679, 822, 1261, 1396 |
| BseRI | GAGGAG | 1 cut(s) | 1650 |
| BseXI | GCAGC | 2 cut(s) | 503, 606 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1843 |
| BshFI | GGCC | 3 cut(s) | 121, 645, 1539 |
| BshVI | ATCGAT | 2 cut(s) | 208, 894 |
| BsiEI | CGRYCG | 1 cut(s) | 1843 |
| BsiHKCI | CYCGRG | 2 cut(s) | 359, 430 |
| BsiSI | CCGG | 3 cut(s) | 369, 1326, 1573 |
| BsiWI | CGTACG | 1 cut(s) | 1795 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 652, 1307 |
| BsmAI | GTCTC | 5 cut(s) | 71, 239, 386, 705, 1418 |
| BsmBI | CGTCTC | 1 cut(s) | 71 |
| BsmI | GAATGC | 2 cut(s) | 512, 1773 |
| BsnI | GGCC | 3 cut(s) | 121, 645, 1539 |
| Bso31I | GGTCTC | 3 cut(s) | 239, 386, 1418 |
| BsoBI | CYCGRG | 2 cut(s) | 359, 430 |
| Bsp1286I | GDGCHC | 1 cut(s) | 346 |
| Bsp143I | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 184 |
| BspACI | CCGC | 9 cut(s) | 111, 128, 231, 447, 561, 660, 994, 1256, 1616 |
| BspANI | GGCC | 3 cut(s) | 121, 645, 1539 |
| BspCNI | CTCAG | 4 cut(s) | 358, 640, 973, 1874 |
| BspDI | ATCGAT | 2 cut(s) | 208, 894 |
| BspHI | TCATGA | 1 cut(s) | 406 |
| BspMAI | CTGCAG | 1 cut(s) | 466 |
| BspOI | GCTAGC | 1 cut(s) | 626 |
| BspPI | GGATC | 4 cut(s) | 326, 442, 1540, 1844 |
| BspQI | GCTCTTC | 1 cut(s) | 150 |
| BspTNI | GGTCTC | 3 cut(s) | 239, 386, 1418 |
| BsrFI | RCCGGY | 1 cut(s) | 368 |
| BsrI | ACTGG | 5 cut(s) | 129, 679, 822, 1261, 1396 |
| BssAI | RCCGGY | 1 cut(s) | 368 |
| BssECI | CCNNGG | 1 cut(s) | 393 |
| BssMI | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| BssSI | CACGAG | 1 cut(s) | 249 |
| Bst2BI | CACGAG | 1 cut(s) | 249 |
| Bst2UI | CCWGG | 5 cut(s) | 512, 696, 734, 1119, 1831 |
| Bst4CI | ACNGT | 2 cut(s) | 82, 1826 |
| Bst6I | CTCTTC | 4 cut(s) | 59, 150, 732, 1708 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 274 |
| BstBAI | YACGTR | 1 cut(s) | 1223 |
| BstC8I | GCNNGC | 4 cut(s) | 624, 643, 668, 1579 |
| BstDEI | CTNAG | 6 cut(s) | 184, 345, 627, 981, 1467, 1861 |
| BstDSI | CCRYGG | 1 cut(s) | 393 |
| BstF5I | GGATG | 7 cut(s) | 98, 270, 691, 1107, 1234, 1726, 1741 |
| BstHHI | GCGC | 1 cut(s) | 833 |
| BstKTI | GATC | 9 cut(s) | 208, 334, 437, 703, 1097, 1548, 1839, 1867, 1896 |
| BstMAI | GTCTC | 5 cut(s) | 71, 239, 386, 705, 1418 |
| BstMBI | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| BstMCI | CGRYCG | 1 cut(s) | 1843 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 237, 274, 560, 1578 |
| BstNI | CCWGG | 5 cut(s) | 512, 696, 734, 1119, 1831 |
| BstNSI | RCATGY | 2 cut(s) | 1256, 1679 |
| BstSCI | CCNGG | 6 cut(s) | 510, 694, 732, 1117, 1572, 1829 |
| BstSFI | CTRYAG | 1 cut(s) | 462 |
| BstSNI | TACGTA | 1 cut(s) | 1223 |
| BstV1I | GCAGC | 2 cut(s) | 503, 606 |
| BstX2I | RGATCY | 2 cut(s) | 1545, 1864 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 394, 674 |
| BstYI | RGATCY | 2 cut(s) | 1545, 1864 |
| Bsu15I | ATCGAT | 2 cut(s) | 208, 894 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1467 |
| BsuI | GTATCC | 1 cut(s) | 674 |
| BsuRI | GGCC | 3 cut(s) | 121, 645, 1539 |
| BsuTUI | ATCGAT | 2 cut(s) | 208, 894 |
| BtgI | CCRYGG | 1 cut(s) | 393 |
| BtsCI | GGATG | 7 cut(s) | 98, 270, 691, 1107, 1234, 1726, 1741 |
| BtsI | GCAGTG | 1 cut(s) | 952 |
| BtsIMutI | CAGTG | 4 cut(s) | 122, 672, 952, 1185 |
| Cac8I | GCNNGC | 4 cut(s) | 624, 643, 668, 1579 |
| CciI | TCATGA | 1 cut(s) | 406 |
| CfoI | GCGC | 1 cut(s) | 833 |
| Cfr10I | RCCGGY | 1 cut(s) | 368 |
| Cfr13I | GGNCC | 2 cut(s) | 1258, 1298 |
| ClaI | ATCGAT | 2 cut(s) | 208, 894 |
| CseI | GACGC | 1 cut(s) | 1628 |
| Csp6I | GTAC | 6 cut(s) | 471, 520, 825, 938, 1323, 1796 |
| CviAII | CATG | 8 cut(s) | 319, 407, 688, 715, 1203, 1253, 1676, 1778 |
| CviQI | GTAC | 6 cut(s) | 471, 520, 825, 938, 1323, 1796 |
| DdeI | CTNAG | 6 cut(s) | 184, 345, 627, 981, 1467, 1861 |
| DpnI | GATC | 9 cut(s) | 207, 333, 436, 702, 1096, 1547, 1838, 1866, 1895 |
| DpnII | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| DraI | TTTAAA | 2 cut(s) | 816, 1240 |
| EaeI | YGGCCR | 2 cut(s) | 643, 1537 |
| Eam1104I | CTCTTC | 4 cut(s) | 59, 150, 732, 1708 |
| EarI | CTCTTC | 4 cut(s) | 59, 150, 732, 1708 |
| Eco105I | TACGTA | 1 cut(s) | 1223 |
| Eco24I | GRGCYC | 1 cut(s) | 346 |
| Eco31I | GGTCTC | 3 cut(s) | 239, 386, 1418 |
| Eco32I | GATATC | 1 cut(s) | 1038 |
| Eco47I | GGWCC | 2 cut(s) | 1258, 1298 |
| Eco57I | CTGAAG | 5 cut(s) | 128, 1062, 1265, 1382, 1398 |
| Eco81I | CCTNAGG | 1 cut(s) | 1467 |
| Eco88I | CYCGRG | 2 cut(s) | 359, 430 |
| EcoRII | CCWGG | 5 cut(s) | 510, 694, 732, 1117, 1829 |
| EcoRV | GATATC | 1 cut(s) | 1038 |
| EcoT22I | ATGCAT | 1 cut(s) | 693 |
| EcoT38I | GRGCYC | 1 cut(s) | 346 |
| Esp3I | CGTCTC | 1 cut(s) | 71 |
| FaeI | CATG | 8 cut(s) | 322, 410, 691, 718, 1206, 1256, 1679, 1781 |
| FatI | CATG | 8 cut(s) | 318, 406, 687, 714, 1202, 1252, 1675, 1777 |
| FauI | CCCGC | 1 cut(s) | 1623 |
| FbaI | TGATCA | 1 cut(s) | 700 |
| Fnu4HI | GCNGC | 5 cut(s) | 112, 129, 492, 561, 620 |
| FokI | GGATG | 7 cut(s) | 105, 277, 678, 1114, 1241, 1733, 1748 |
| FriOI | GRGCYC | 1 cut(s) | 346 |
| Fsp4HI | GCNGC | 5 cut(s) | 112, 129, 492, 561, 620 |
| FspBI | CTAG | 4 cut(s) | 474, 593, 623, 864 |
| GlaI | GCGC | 1 cut(s) | 832 |
| GluI | GCNGC | 5 cut(s) | 112, 129, 492, 561, 620 |
| GsuI | CTGGAG | 4 cut(s) | 533, 674, 716, 1428 |
| HaeIII | GGCC | 3 cut(s) | 121, 645, 1539 |
| HapII | CCGG | 3 cut(s) | 369, 1326, 1573 |
| HgaI | GACGC | 1 cut(s) | 1628 |
| HhaI | GCGC | 1 cut(s) | 833 |
| Hin1II | CATG | 8 cut(s) | 322, 410, 691, 718, 1206, 1256, 1679, 1781 |
| Hin6I | GCGC | 1 cut(s) | 831 |
| HinP1I | GCGC | 1 cut(s) | 831 |
| HincII | GTYRAC | 4 cut(s) | 1126, 1266, 1822, 1880 |
| HindII | GTYRAC | 4 cut(s) | 1126, 1266, 1822, 1880 |
| HindIII | AAGCTT | 1 cut(s) | 1074 |
| HinfI | GANTC | 6 cut(s) | 25, 58, 105, 1190, 1373, 1818 |
| HpaI | GTTAAC | 2 cut(s) | 1126, 1266 |
| HpaII | CCGG | 3 cut(s) | 369, 1326, 1573 |
| HphI | GGTGA | 3 cut(s) | 376, 383, 710 |
| Hpy166II | GTNNAC | 6 cut(s) | 85, 1126, 1266, 1278, 1822, 1880 |
| Hpy188III | TCNNGA | 9 cut(s) | 359, 407, 432, 546, 653, 1349, 1445, 1509, 1712 |
| Hpy8I | GTNNAC | 6 cut(s) | 85, 1126, 1266, 1278, 1822, 1880 |
| Hpy99I | CGWCG | 1 cut(s) | 92 |
| HpyAV | CCTTC | 7 cut(s) | 66, 659, 791, 926, 1162, 1240, 1763 |
| HpyCH4III | ACNGT | 2 cut(s) | 82, 1826 |
| HpyCH4IV | ACGT | 6 cut(s) | 15, 87, 531, 1066, 1222, 1764 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 237, 274, 560, 1578 |
| HpyF3I | CTNAG | 6 cut(s) | 184, 345, 627, 981, 1467, 1861 |
| HpySE526I | ACGT | 6 cut(s) | 15, 87, 531, 1066, 1222, 1764 |
| Hsp92II | CATG | 8 cut(s) | 322, 410, 691, 718, 1206, 1256, 1679, 1781 |
| HspAI | GCGC | 1 cut(s) | 831 |
| Ksp22I | TGATCA | 1 cut(s) | 700 |
| KspAI | GTTAAC | 2 cut(s) | 1126, 1266 |
| Kzo9I | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| LguI | GCTCTTC | 1 cut(s) | 150 |
| LmnI | GCTCC | 5 cut(s) | 488, 499, 616, 950, 1534 |
| Lsp1109I | GCAGC | 2 cut(s) | 503, 606 |
| LweI | GCATC | 5 cut(s) | 233, 255, 547, 700, 1711 |
| MaeI | CTAG | 4 cut(s) | 474, 593, 623, 864 |
| MaeII | ACGT | 6 cut(s) | 15, 87, 531, 1066, 1222, 1764 |
| MaeIII | GTNAC | 2 cut(s) | 741, 1461 |
| MalI | GATC | 9 cut(s) | 207, 333, 436, 702, 1096, 1547, 1838, 1866, 1895 |
| MboI | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| MboII | GAAGA | 7 cut(s) | 76, 167, 361, 719, 954, 1118, 1695 |
| MfeI | CAATTG | 1 cut(s) | 327 |
| MflI | RGATCY | 2 cut(s) | 1545, 1864 |
| MhlI | GDGCHC | 1 cut(s) | 346 |
| MlsI | TGGCCA | 2 cut(s) | 645, 1539 |
| MluNI | TGGCCA | 2 cut(s) | 645, 1539 |
| MlyI | GAGTC | 1 cut(s) | 1827 |
| MmeI | TCCRAC | 3 cut(s) | 70, 578, 998 |
| Mox20I | TGGCCA | 2 cut(s) | 645, 1539 |
| Mph1103I | ATGCAT | 1 cut(s) | 693 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1054, 1113, 1344, 1773 |
| MscI | TGGCCA | 2 cut(s) | 645, 1539 |
| MseI | TTAA | 7 cut(s) | 18, 162, 815, 998, 1125, 1239, 1265 |
| MslI | CAYNNNNRTG | 4 cut(s) | 317, 392, 696, 974 |
| Msp20I | TGGCCA | 2 cut(s) | 645, 1539 |
| MspA1I | CMGCKG | 1 cut(s) | 1304 |
| MspI | CCGG | 3 cut(s) | 369, 1326, 1573 |
| MspR9I | CCNGG | 6 cut(s) | 512, 696, 734, 1119, 1574, 1831 |
| MunI | CAATTG | 1 cut(s) | 327 |
| Mva1269I | GAATGC | 2 cut(s) | 512, 1773 |
| MvaI | CCWGG | 5 cut(s) | 512, 696, 734, 1119, 1831 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 237, 274, 560, 1578 |
| NciI | CCSGG | 1 cut(s) | 1574 |
| NdeII | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| NheI | GCTAGC | 1 cut(s) | 622 |
| NlaIII | CATG | 8 cut(s) | 322, 410, 691, 718, 1206, 1256, 1679, 1781 |
| NmeAIII | GCCGAG | 2 cut(s) | 216, 859 |
| NmuCI | GTSAC | 1 cut(s) | 741 |
| NsiI | ATGCAT | 1 cut(s) | 693 |
| NspI | RCATGY | 2 cut(s) | 1256, 1679 |
| OliI | CACNNNNGTG | 1 cut(s) | 974 |
| PaeR7I | CTCGAG | 1 cut(s) | 359 |
| PagI | TCATGA | 1 cut(s) | 406 |
| PciSI | GCTCTTC | 1 cut(s) | 150 |
| PctI | GAATGC | 2 cut(s) | 512, 1773 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1054, 1113, 1344, 1773 |
| PfeI | GAWTC | 5 cut(s) | 25, 58, 105, 1190, 1373 |
| Pfl23II | CGTACG | 1 cut(s) | 1795 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 652, 1307 |
| PfoI | TCCNGGA | 2 cut(s) | 732, 1829 |
| PkrI | GCNGC | 5 cut(s) | 113, 130, 493, 562, 621 |
| PleI | GAGTC | 1 cut(s) | 1826 |
| PpsI | GAGTC | 1 cut(s) | 1826 |
| Ppu21I | YACGTR | 1 cut(s) | 1223 |
| Psp6I | CCWGG | 5 cut(s) | 510, 694, 732, 1117, 1829 |
| PspGI | CCWGG | 5 cut(s) | 510, 694, 732, 1117, 1829 |
| PspLI | CGTACG | 1 cut(s) | 1795 |
| PspPI | GGNCC | 2 cut(s) | 1258, 1298 |
| PstI | CTGCAG | 1 cut(s) | 466 |
| PsuI | RGATCY | 2 cut(s) | 1545, 1864 |
| PvuII | CAGCTG | 1 cut(s) | 1304 |
| RsaI | GTAC | 6 cut(s) | 472, 521, 826, 939, 1324, 1797 |
| RsaNI | GTAC | 6 cut(s) | 471, 520, 825, 938, 1323, 1796 |
| RseI | CAYNNNNRTG | 4 cut(s) | 317, 392, 696, 974 |
| SapI | GCTCTTC | 1 cut(s) | 150 |
| SaqAI | TTAA | 7 cut(s) | 18, 162, 815, 998, 1125, 1239, 1265 |
| SatI | GCNGC | 5 cut(s) | 112, 129, 492, 561, 620 |
| Sau3AI | GATC | 9 cut(s) | 205, 331, 434, 700, 1094, 1545, 1836, 1864, 1893 |
| Sau96I | GGNCC | 2 cut(s) | 1258, 1298 |
| ScaI | AGTACT | 1 cut(s) | 826 |
| SchI | GAGTC | 1 cut(s) | 1827 |
| ScrFI | CCNGG | 6 cut(s) | 512, 696, 734, 1119, 1574, 1831 |
| SduI | GDGCHC | 1 cut(s) | 346 |
| SfaNI | GCATC | 5 cut(s) | 233, 255, 547, 700, 1711 |
| SfcI | CTRYAG | 1 cut(s) | 462 |
| Sfr274I | CTCGAG | 1 cut(s) | 359 |
| SinI | GGWCC | 2 cut(s) | 1258, 1298 |
| SlaI | CTCGAG | 1 cut(s) | 359 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 317, 392, 696, 974 |
| SmlI | CTYRAG | 3 cut(s) | 49, 176, 359 |
| SmoI | CTYRAG | 3 cut(s) | 49, 176, 359 |
| SnaBI | TACGTA | 1 cut(s) | 1223 |
| SsiI | CCGC | 9 cut(s) | 111, 128, 231, 447, 561, 660, 994, 1256, 1616 |
| SspI | AATATT | 1 cut(s) | 455 |
| SspMI | CTAG | 4 cut(s) | 474, 593, 623, 864 |
| StyD4I | CCNGG | 6 cut(s) | 510, 694, 732, 1117, 1572, 1829 |
| TaaI | ACNGT | 2 cut(s) | 82, 1826 |
| TaiI | ACGT | 6 cut(s) | 18, 90, 534, 1069, 1225, 1767 |
| TaqI | TCGA | 7 cut(s) | 208, 360, 894, 901, 1093, 1635, 1839 |
| TaqII | GACCGA | 1 cut(s) | 1857 |
| TatI | WGTACW | 2 cut(s) | 824, 937 |
| TauI | GCSGC | 3 cut(s) | 114, 131, 563 |
| TfiI | GAWTC | 5 cut(s) | 25, 58, 105, 1190, 1373 |
| Tru1I | TTAA | 7 cut(s) | 18, 162, 815, 998, 1125, 1239, 1265 |
| Tru9I | TTAA | 7 cut(s) | 18, 162, 815, 998, 1125, 1239, 1265 |
| TscAI | CASTG | 4 cut(s) | 129, 679, 952, 1192 |
| TseFI | GTSAC | 1 cut(s) | 741 |
| TseI | GCWGC | 2 cut(s) | 491, 619 |
| Tsp45I | GTSAC | 1 cut(s) | 741 |
| TspDTI | ATGAA | 7 cut(s) | 603, 676, 864, 1505, 1752, 1766, 1799 |
| TspGWI | ACGGA | 4 cut(s) | 382, 1311, 1813, 1863 |
| TspRI | CASTG | 4 cut(s) | 129, 679, 952, 1192 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 652, 1307 |
| VpaK11BI | GGWCC | 2 cut(s) | 1258, 1298 |
| XapI | RAATTY | 1 cut(s) | 810 |
| XceI | RCATGY | 2 cut(s) | 1256, 1679 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 674 |
| XhoI | CTCGAG | 1 cut(s) | 359 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1054, 1113, 1344, 1773 |
| XspI | CTAG | 4 cut(s) | 474, 593, 623, 864 |
| ZrmI | AGTACT | 1 cut(s) | 826 |
| Zsp2I | ATGCAT | 1 cut(s) | 693 |