Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0002235

Physical Location & Seq

Genomic Coordinates Reverse (-)

21716694 .. 21723705

Gene Structure 7012 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00301330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGCCTGCGGTTACGGGGGCGATTGGGCTCGCGTCGGCGTGTTTCGTTTCCTTCGGTGGTGCGGATTGGGGCGGCGTGGTTTGCTTCCTCGGATTAGGCCATGGTAGTTCGGTAAATTCTCGGACTTTGTTTGTAGAAATGGAAATCCATGAAGGAGGTGTAATTCGCAATTGTGTGATCAAGCTGAGGGAGGATTGTAAAAAGAGAAGGGACAAGGTCTATGTTGGCTGTGGAGCTGGTTTTGGAGGTGACAGGCCTTTGGCAGCTCTTAAGTTGCTGCAGAGAGTCAAAGAGCTCAACTATATCATGCTTCAATGCCTCGCAGACCGCACCCTTGCTGAACGGTATCAAGTTATGGTTTCGGGTGGTGATCGTTATGATTCAAGGATTTCTGACTGGATGCGATTGCTCCTTCCTTTGGCTGTTGAGAGAGGAACTTGCATAATCACCAACATGGGTGCAAGTTCAGCCTCTCATGAGAAGTCATTTTTGATGGAAGGTGGTATTAGCACCTATCTGGGAGCGGCTCCGATTGTTGAATGTTTGGAAAAGTATCAGCCAAATGTAATTATAACTTCACGGGTTGCAGATGCTGCCTTATTTTTAGCACCAATGGCCATCTTAGGGTGTGGTTGTCAACTCACGGGGGGATACTTCATGCACCCAGGGGACAAGTCTCGAGACATGTCTTCCTCTCAGCTCCTAGACTTGTCACTTCCTTATGCTGAAATTAGCTCTGATGGAAAAGTATGTGTAGTGAAGGCAGACGGTAGTGGTGGGGTTTTGAACTTCAGTACATGTGCTCAACAACTTCTTTATGAGATCGGGAAACCGGGTGCTTATGCAACTCCTGATGTGATAATTGATATCCGGGATGTTTCATTCTACCCATTATCAAGTTGTAAGGTCCTCTGTGCTGGAGCAAAACCATCTGCAGTATCAGTTCCTGATAAACTCCTGCGGTTGGTTCCAAAGGACTATGGTTGGAAAGGATGGGGTGAAATATCTTATGGAGGAAATGAATGTGTTAAACGTGCCAAGATTGCTGAATATCTGAAAGTGGAAGGAGAGAGGTCTTCCGGTGCTTGCCGAGACAGATTGAGGGATACAGAACATAGGGACACGAAGAGGAAGAAGGATTCAATTCGTGGTTGTTGGGTGAGTTCACTCAATTTCTTCATCACATTAATTCATTGCTTCTCTACAATTGGTGGTGCCTCTTCTCGAATATTGCTTCTTCATATTCGTGCACTAGCAGCAAATGGAGAAGCTTCTGGTAATGATGTTCTATCAGTCCATGGATCTGCAGATGAGTCCACTTCAGTTGAAGATGCATTTGAGTCTGCCAATGAATTAGATCAGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AtuA

Protein Analysis

455

Amino Acids

48.99

Weight (kDa)

6.71

Isoelectric Point (pI)

35.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AtuA	PF07287	73 - 156	3.8e-13	Acyclic terpene utilisation family protein AtuA
AtuA	PF07287	170 - 206	8e-08	Acyclic terpene utilisation family protein AtuA
AtuA	PF07287	207 - 350	2.9e-32	Acyclic terpene utilisation family protein AtuA

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01770
fragaria_vesca	FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830 FvH4_7g13830
malus_domestica	MD01G1054400.v1.1 MD10G1234500.v1.1
prunus_persica	Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1 Prupe.2G164100_v2.0.a1
pyrus_communis	pycom01g07960 pycom06g04950 pycom07g13860 pycom07g13870
rosa_chinensis	RchiOBHm_Chr1g0354021 RchiOBHm_Chr1g0354041
rosa_laevigata	RLG00000028232 RLG00000028235
rosa_multiflora	Rmu_sc0004632.1_g000002 Rmu_sc0004632.1_g000004 Rmu_sc0025756.1_g000001 Rmu_sc0031149.1_g000001 Rmu_sc0031810.1_g000001
rosa_roxburghii	Rroxscaffold_4G00301280 Rroxscaffold_4G00301310 Rroxscaffold_4G00301330
rosa_rugosa	Rorug01G0240300 Rorug01G0240500
rosa_samantha	Rh1AG251600 Rh1BG223200 Rh1BG223400 Rh1CG236000 Rh1DG250100 Rh1DG250300
rosa_wichuraiana	Rw1G021940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	572
AccB1I	GGYRCC	1 cut(s)	1214
AccBSI	CCGCTC	1 cut(s)	524
AccII	CGCG	1 cut(s)	32
AciI	CCGC	6 cut(s)	8, 62, 72, 328, 524, 961
AclWI	GGATC	1 cut(s)	1309
AcoI	YGGCCR	1 cut(s)	615
AcsI	RAATTY	1 cut(s)	115
AcuI	CTGAAG	2 cut(s)	775, 1305
AfaI	GTAC	1 cut(s)	796
AfiI	CCNNNNNNNGG	3 cut(s)	418, 624, 964
AflII	CTTAAG	1 cut(s)	269
AflIII	ACRYGT	2 cut(s)	684, 797
AgsI	TTSAA	6 cut(s)	314, 384, 539, 787, 1143, 1328
AjnI	CCWGG	1 cut(s)	664
AluBI	AGCT	7 cut(s)	184, 236, 266, 295, 700, 735, 1271
AluI	AGCT	7 cut(s)	184, 236, 266, 295, 700, 735, 1271
Alw21I	GWGCWC	3 cut(s)	297, 805, 1252
Alw26I	GTCTC	3 cut(s)	675, 681, 1086
Alw44I	GTGCAC	1 cut(s)	1248
AlwI	GGATC	1 cut(s)	1309
AlwNI	CAGNNNCTG	2 cut(s)	593, 947
Ama87I	CYCGRG	1 cut(s)	678
AoxI	GGCC	3 cut(s)	97, 254, 615
ApaLI	GTGCAC	1 cut(s)	1248
ApeKI	GCWGC	4 cut(s)	263, 277, 593, 1256
ApoI	RAATTY	1 cut(s)	115
AseI	ATTAAT	1 cut(s)	1187
AspS9I	GGNCC	1 cut(s)	907
AsuC2I	CCSGG	2 cut(s)	834, 872
AsuHPI	GGTGA	5 cut(s)	260, 380, 439, 1010, 1171
AvaI	CYCGRG	1 cut(s)	678
AvaII	GGWCC	1 cut(s)	907
BaeGI	GKGCMC	1 cut(s)	1252
BalI	TGGCCA	1 cut(s)	617
BanI	GGYRCC	1 cut(s)	1214
BanII	GRGCYC	2 cut(s)	30, 297
BbsI	GAAGAC	2 cut(s)	681, 1068
Bbv12I	GWGCWC	3 cut(s)	297, 805, 1252
BbvCI	CCTCAGC	1 cut(s)	185
BbvI	GCAGC	4 cut(s)	264, 275, 580, 1268
BccI	CCATC	5 cut(s)	487, 626, 734, 937, 987
BciT130I	CCWGG	1 cut(s)	666
BciVI	GTATCC	2 cut(s)	644, 1099
BclI	TGATCA	1 cut(s)	177
BcnI	CCSGG	2 cut(s)	834, 872
BcoDI	GTCTC	3 cut(s)	675, 681, 1086
BfaI	CTAG	2 cut(s)	704, 1253
BfmI	CTRYAG	3 cut(s)	278, 933, 1305
BfrI	CTTAAG	1 cut(s)	269
BfuI	GTATCC	2 cut(s)	644, 1099
BisI	GCNGC	6 cut(s)	73, 264, 278, 525, 594, 1257
BlsI	GCNGC	6 cut(s)	74, 265, 279, 526, 595, 1258
Bme1390I	CCNGG	3 cut(s)	666, 834, 872
Bme18I	GGWCC	1 cut(s)	907
BmeT110I	CYCGRG	1 cut(s)	678
BmgT120I	GGNCC	1 cut(s)	907
BmiI	GGNNCC	3 cut(s)	528, 969, 1216
BmrFI	CCNGG	3 cut(s)	666, 834, 872
BmsI	GCATC	3 cut(s)	390, 580, 1321
BpiI	GAAGAC	2 cut(s)	681, 1068
BpmI	CTGGAG	1 cut(s)	939
Bpu10I	CCTNAGC	1 cut(s)	185
BpuMI	CCSGG	2 cut(s)	834, 872
BsaJI	CCNNGG	5 cut(s)	88, 100, 664, 665, 1297
BsaWI	WCCGGW	1 cut(s)	1079
Bsc4I	CCNNNNNNNGG	3 cut(s)	418, 624, 964
Bse1I	ACTGG	1 cut(s)	401
Bse3DI	GCAATG	1 cut(s)	1192
BseBI	CCWGG	1 cut(s)	666
BseDI	CCNNGG	5 cut(s)	88, 100, 664, 665, 1297
BseGI	GGATG	3 cut(s)	405, 880, 998
BseLI	CCNNNNNNNGG	3 cut(s)	418, 624, 964
BseMI	GCAATG	1 cut(s)	1192
BseMII	CTCAG	2 cut(s)	176, 710
BseNI	ACTGG	1 cut(s)	401
BseSI	GKGCMC	1 cut(s)	1252
BseXI	GCAGC	4 cut(s)	264, 275, 580, 1268
Bsh1236I	CGCG	1 cut(s)	32
BshFI	GGCC	3 cut(s)	99, 256, 617
BshNI	GGYRCC	1 cut(s)	1214
BsiHKAI	GWGCWC	3 cut(s)	297, 805, 1252
BsiHKCI	CYCGRG	1 cut(s)	678
BsiSI	CCGG	3 cut(s)	833, 871, 1080
BslFI	GGGAC	3 cut(s)	224, 683, 1133
BslI	CCNNNNNNNGG	3 cut(s)	418, 624, 964
BsmAI	GTCTC	3 cut(s)	675, 681, 1086
BsmFI	GGGAC	3 cut(s)	224, 683, 1133
BsnI	GGCC	3 cut(s)	99, 256, 617
BsoBI	CYCGRG	1 cut(s)	678
Bsp1286I	GDGCHC	4 cut(s)	30, 297, 805, 1252
Bsp143I	GATC	5 cut(s)	177, 370, 822, 1301, 1357
Bsp19I	CCATGG	2 cut(s)	100, 1297
BspACI	CCGC	6 cut(s)	8, 62, 72, 328, 524, 961
BspANI	GGCC	3 cut(s)	99, 256, 617
BspCNI	CTCAG	2 cut(s)	177, 709
BspFNI	CGCG	1 cut(s)	32
BspHI	TCATGA	1 cut(s)	475
BspLI	GGNNCC	3 cut(s)	528, 969, 1216
BspMAI	CTGCAG	3 cut(s)	282, 937, 1309
BspPI	GGATC	1 cut(s)	1309
BspT107I	GGYRCC	1 cut(s)	1214
BspTI	CTTAAG	1 cut(s)	269
BsrBI	CCGCTC	1 cut(s)	524
BsrDI	GCAATG	1 cut(s)	1192
BsrI	ACTGG	1 cut(s)	401
BssECI	CCNNGG	5 cut(s)	88, 100, 664, 665, 1297
BssMI	GATC	5 cut(s)	177, 370, 822, 1301, 1357
BssT1I	CCWWGG	2 cut(s)	100, 1297
Bst2UI	CCWGG	1 cut(s)	666
Bst4CI	ACNGT	2 cut(s)	345, 770
Bst6I	CTCTTC	2 cut(s)	1121, 1225
BstAFI	CTTAAG	1 cut(s)	269
BstAPI	GCANNNNNTGC	1 cut(s)	593
BstC8I	GCNNGC	3 cut(s)	6, 30, 1087
BstDEI	CTNAG	3 cut(s)	185, 622, 696
BstDSI	CCRYGG	2 cut(s)	100, 1297
BstF5I	GGATG	3 cut(s)	405, 880, 998
BstFNI	CGCG	1 cut(s)	32
BstKTI	GATC	5 cut(s)	180, 373, 825, 1304, 1360
BstMAI	GTCTC	3 cut(s)	675, 681, 1086
BstMBI	GATC	5 cut(s)	177, 370, 822, 1301, 1357
BstMWI	GCNNNNNNNGC	6 cut(s)	81, 467, 593, 614, 1043, 1256
BstNI	CCWGG	1 cut(s)	666
BstNSI	RCATGY	2 cut(s)	688, 801
BstSCI	CCNGG	3 cut(s)	664, 832, 870
BstSFI	CTRYAG	3 cut(s)	278, 933, 1305
BstSLI	GKGCMC	1 cut(s)	1252
BstUI	CGCG	1 cut(s)	32
BstV1I	GCAGC	4 cut(s)	264, 275, 580, 1268
BstV2I	GAAGAC	2 cut(s)	681, 1068
BstX2I	RGATCY	1 cut(s)	1301
BstYI	RGATCY	1 cut(s)	1301
BsuI	GTATCC	2 cut(s)	644, 1099
BsuRI	GGCC	3 cut(s)	99, 256, 617
BtgI	CCRYGG	2 cut(s)	100, 1297
BtsCI	GGATG	3 cut(s)	405, 880, 998
BtsIMutI	CAGTG	1 cut(s)	1367
Cac8I	GCNNGC	3 cut(s)	6, 30, 1087
CaiI	CAGNNNCTG	2 cut(s)	593, 947
CciI	TCATGA	1 cut(s)	475
Cfr13I	GGNCC	1 cut(s)	907
CseI	GACGC	1 cut(s)	21
Csp6I	GTAC	1 cut(s)	795
CspCI	CAANNNNNGTGG	2 cut(s)	1306, 1341
CviAII	CATG	9 cut(s)	101, 149, 307, 454, 476, 658, 685, 798, 1298
CviQI	GTAC	1 cut(s)	795
DdeI	CTNAG	3 cut(s)	185, 622, 696
DpnI	GATC	5 cut(s)	179, 372, 824, 1303, 1359
DpnII	GATC	5 cut(s)	177, 370, 822, 1301, 1357
EaeI	YGGCCR	1 cut(s)	615
Eam1104I	CTCTTC	2 cut(s)	1121, 1225
EarI	CTCTTC	2 cut(s)	1121, 1225
Ecl136II	GAGCTC	1 cut(s)	295
Eco130I	CCWWGG	2 cut(s)	100, 1297
Eco147I	AGGCCT	1 cut(s)	256
Eco24I	GRGCYC	2 cut(s)	30, 297
Eco32I	GATATC	1 cut(s)	868
Eco47I	GGWCC	1 cut(s)	907
Eco53kI	GAGCTC	1 cut(s)	295
Eco57I	CTGAAG	2 cut(s)	775, 1305
Eco88I	CYCGRG	1 cut(s)	678
EcoICRI	GAGCTC	1 cut(s)	295
EcoO109I	RGGNCCY	1 cut(s)	907
EcoRII	CCWGG	1 cut(s)	664
EcoRV	GATATC	1 cut(s)	868
EcoT14I	CCWWGG	2 cut(s)	100, 1297
EcoT22I	ATGCAT	1 cut(s)	1336
EcoT38I	GRGCYC	2 cut(s)	30, 297
ErhI	CCWWGG	2 cut(s)	100, 1297
FaeI	CATG	9 cut(s)	104, 152, 310, 457, 479, 661, 688, 801, 1301
FaqI	GGGAC	3 cut(s)	224, 683, 1133
FatI	CATG	9 cut(s)	100, 148, 306, 453, 475, 657, 684, 797, 1297
FbaI	TGATCA	1 cut(s)	177
Fnu4HI	GCNGC	6 cut(s)	73, 264, 278, 525, 594, 1257
FokI	GGATG	3 cut(s)	412, 887, 1005
FriOI	GRGCYC	2 cut(s)	30, 297
Fsp4HI	GCNGC	6 cut(s)	73, 264, 278, 525, 594, 1257
FspBI	CTAG	2 cut(s)	704, 1253
GluI	GCNGC	6 cut(s)	73, 264, 278, 525, 594, 1257
GsuI	CTGGAG	1 cut(s)	939
HaeIII	GGCC	3 cut(s)	99, 256, 617
HapII	CCGG	3 cut(s)	833, 871, 1080
HgaI	GACGC	1 cut(s)	21
Hin1II	CATG	9 cut(s)	104, 152, 310, 457, 479, 661, 688, 801, 1301
HincII	GTYRAC	1 cut(s)	638
HindII	GTYRAC	1 cut(s)	638
HindIII	AAGCTT	1 cut(s)	1269
HinfI	GANTC	5 cut(s)	285, 380, 1139, 1313, 1340
HpaII	CCGG	3 cut(s)	833, 871, 1080
HphI	GGTGA	5 cut(s)	260, 380, 439, 1010, 1171
Hpy166II	GTNNAC	4 cut(s)	638, 1166, 1250, 1317
Hpy188I	TCNGA	6 cut(s)	92, 123, 394, 531, 739, 1056
Hpy188III	TCNNGA	7 cut(s)	476, 678, 680, 826, 851, 947, 1224
Hpy8I	GTNNAC	4 cut(s)	638, 1166, 1250, 1317
Hpy99I	CGWCG	1 cut(s)	37
HpyAV	CCTTC	8 cut(s)	61, 146, 201, 422, 491, 754, 1058, 1129
HpyCH4III	ACNGT	2 cut(s)	345, 770
HpyCH4IV	ACGT	1 cut(s)	1033
HpyF10VI	GCNNNNNNNGC	6 cut(s)	81, 467, 593, 614, 1043, 1256
HpyF3I	CTNAG	3 cut(s)	185, 622, 696
HpySE526I	ACGT	1 cut(s)	1033
Hsp92II	CATG	9 cut(s)	104, 152, 310, 457, 479, 661, 688, 801, 1301
Ksp22I	TGATCA	1 cut(s)	177
Kzo9I	GATC	5 cut(s)	177, 370, 822, 1301, 1357
LmnI	GCTCC	6 cut(s)	233, 414, 521, 532, 705, 920
Lsp1109I	GCAGC	4 cut(s)	264, 275, 580, 1268
LweI	GCATC	3 cut(s)	390, 580, 1321
MaeI	CTAG	2 cut(s)	704, 1253
MaeII	ACGT	1 cut(s)	1033
MaeIII	GTNAC	3 cut(s)	10, 248, 711
MalI	GATC	5 cut(s)	179, 372, 824, 1303, 1359
MbiI	CCGCTC	1 cut(s)	524
MboI	GATC	5 cut(s)	177, 370, 822, 1301, 1357
MboII	GAAGA	8 cut(s)	681, 1068, 1138, 1144, 1168, 1212, 1229, 1340
MfeI	CAATTG	2 cut(s)	169, 1206
MflI	RGATCY	1 cut(s)	1301
MhlI	GDGCHC	4 cut(s)	30, 297, 805, 1252
MlsI	TGGCCA	1 cut(s)	617
MluNI	TGGCCA	1 cut(s)	617
MlyI	GAGTC	3 cut(s)	294, 1322, 1349
MmeI	TCCRAC	1 cut(s)	965
Mox20I	TGGCCA	1 cut(s)	617
Mph1103I	ATGCAT	1 cut(s)	1336
MscI	TGGCCA	1 cut(s)	617
MseI	TTAA	3 cut(s)	270, 1029, 1187
MslI	CAYNNNNRTG	2 cut(s)	452, 1245
Msp20I	TGGCCA	1 cut(s)	617
MspCI	CTTAAG	1 cut(s)	269
MspI	CCGG	3 cut(s)	833, 871, 1080
MspR9I	CCNGG	3 cut(s)	666, 834, 872
MunI	CAATTG	2 cut(s)	169, 1206
MvaI	CCWGG	1 cut(s)	666
MvnI	CGCG	1 cut(s)	32
MwoI	GCNNNNNNNGC	6 cut(s)	81, 467, 593, 614, 1043, 1256
NciI	CCSGG	2 cut(s)	834, 872
NcoI	CCATGG	2 cut(s)	100, 1297
NdeII	GATC	5 cut(s)	177, 370, 822, 1301, 1357
NlaIII	CATG	9 cut(s)	104, 152, 310, 457, 479, 661, 688, 801, 1301
NlaIV	GGNNCC	3 cut(s)	528, 969, 1216
NmeAIII	GCCGAG	1 cut(s)	1115
NmuCI	GTSAC	2 cut(s)	248, 711
NsiI	ATGCAT	1 cut(s)	1336
NspI	RCATGY	2 cut(s)	688, 801
PaeR7I	CTCGAG	1 cut(s)	678
PagI	TCATGA	1 cut(s)	475
PasI	CCCWGGG	1 cut(s)	665
PceI	AGGCCT	1 cut(s)	256
PciI	ACATGT	2 cut(s)	684, 797
PfeI	GAWTC	2 cut(s)	380, 1139
PflFI	GACNNNGTC	1 cut(s)	215
PfoI	TCCNGGA	1 cut(s)	870
PkrI	GCNGC	6 cut(s)	74, 265, 279, 526, 595, 1258
PleI	GAGTC	3 cut(s)	293, 1321, 1348
PpsI	GAGTC	3 cut(s)	293, 1321, 1348
PpuMI	RGGWCCY	1 cut(s)	907
PscI	ACATGT	2 cut(s)	684, 797
PshBI	ATTAAT	1 cut(s)	1187
PsiI	TTATAA	1 cut(s)	572
Psp124BI	GAGCTC	1 cut(s)	297
Psp5II	RGGWCCY	1 cut(s)	907
Psp6I	CCWGG	1 cut(s)	664
PspGI	CCWGG	1 cut(s)	664
PspN4I	GGNNCC	3 cut(s)	528, 969, 1216
PspPI	GGNCC	1 cut(s)	907
PspPPI	RGGWCCY	1 cut(s)	907
PstI	CTGCAG	3 cut(s)	282, 937, 1309
PstNI	CAGNNNCTG	2 cut(s)	593, 947
PsuI	RGATCY	1 cut(s)	1301
PsyI	GACNNNGTC	1 cut(s)	215
RsaI	GTAC	1 cut(s)	796
RsaNI	GTAC	1 cut(s)	795
RseI	CAYNNNNRTG	2 cut(s)	452, 1245
SacI	GAGCTC	1 cut(s)	297
SaqAI	TTAA	3 cut(s)	270, 1029, 1187
SatI	GCNGC	6 cut(s)	73, 264, 278, 525, 594, 1257
Sau3AI	GATC	5 cut(s)	177, 370, 822, 1301, 1357
Sau96I	GGNCC	1 cut(s)	907
SchI	GAGTC	3 cut(s)	294, 1322, 1349
ScrFI	CCNGG	3 cut(s)	666, 834, 872
SduI	GDGCHC	4 cut(s)	30, 297, 805, 1252
SfaNI	GCATC	3 cut(s)	390, 580, 1321
SfcI	CTRYAG	3 cut(s)	278, 933, 1305
Sfr274I	CTCGAG	1 cut(s)	678
SinI	GGWCC	1 cut(s)	907
SlaI	CTCGAG	1 cut(s)	678
SmiMI	CAYNNNNRTG	2 cut(s)	452, 1245
SmlI	CTYRAG	2 cut(s)	269, 678
SmoI	CTYRAG	2 cut(s)	269, 678
SseBI	AGGCCT	1 cut(s)	256
SsiI	CCGC	6 cut(s)	8, 62, 72, 328, 524, 961
SspI	AATATT	1 cut(s)	1230
SspMI	CTAG	2 cut(s)	704, 1253
SstI	GAGCTC	1 cut(s)	297
StuI	AGGCCT	1 cut(s)	256
StyD4I	CCNGG	3 cut(s)	664, 832, 870
StyI	CCWWGG	2 cut(s)	100, 1297
TaaI	ACNGT	2 cut(s)	345, 770
TaiI	ACGT	1 cut(s)	1036
TaqI	TCGA	2 cut(s)	679, 1225
TatI	WGTACW	1 cut(s)	794
TauI	GCSGC	2 cut(s)	75, 527
TfiI	GAWTC	2 cut(s)	380, 1139
Tru1I	TTAA	3 cut(s)	270, 1029, 1187
Tru9I	TTAA	3 cut(s)	270, 1029, 1187
TscAI	CASTG	1 cut(s)	1367
TseFI	GTSAC	2 cut(s)	248, 711
TseI	GCWGC	4 cut(s)	263, 277, 593, 1256
Tsp45I	GTSAC	2 cut(s)	248, 711
TspDTI	ATGAA	8 cut(s)	165, 646, 870, 1035, 1168, 1181, 1229, 1365
TspRI	CASTG	1 cut(s)	1367
Tth111I	GACNNNGTC	1 cut(s)	215
Vha464I	CTTAAG	1 cut(s)	269
VneI	GTGCAC	1 cut(s)	1248
VpaK11BI	GGWCC	1 cut(s)	907
VspI	ATTAAT	1 cut(s)	1187
XapI	RAATTY	1 cut(s)	115
XceI	RCATGY	2 cut(s)	688, 801
XhoI	CTCGAG	1 cut(s)	678
XspI	CTAG	2 cut(s)	704, 1253
Zsp2I	ATGCAT	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.